Epithelial-Mesenchymal Transition, human (Scheel, 2011)

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Download the whole report

Name	miRBASE accession
hsa-miR-489-3p Links miRBase	MIMAT0002805

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Promoter	Score	Transcript	Gene	Gene Info
chr6_-_139695757	0.05	ENST00000367651.2	CITED2	Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
chr18_-_65184217	0.05	ENST00000310045.7	DSEL	dermatan sulfate epimerase-like
chr3_-_114790179	0.04	ENST00000462705.1	ZBTB20	zinc finger and BTB domain containing 20
chr1_-_84464780	0.04	ENST00000260505.8	TTLL7	tubulin tyrosine ligase-like family, member 7
chrX_+_100333709	0.04	ENST00000372930.4	TMEM35	transmembrane protein 35
chr9_+_120466650	0.03	ENST00000355622.6	TLR4	toll-like receptor 4
chr5_-_172756506	0.03	ENST00000265087.4	STC2	stanniocalcin 2
chr8_-_122653630	0.03	ENST00000303924.4	HAS2	hyaluronan synthase 2
chr12_+_60083118	0.03	ENST00000261187.4 ENST00000543448.1	SLC16A7	solute carrier family 16 (monocarboxylate transporter), member 7
chr15_+_62853562	0.03	ENST00000561311.1	TLN2	talin 2
chr5_-_168728103	0.03	ENST00000519560.1	SLIT3	slit homolog 3 (Drosophila)
chr2_+_201170703	0.02	ENST00000358677.5	SPATS2L	spermatogenesis associated, serine-rich 2-like
chr2_+_61404624	0.02	ENST00000394457.3	AHSA2	AHA1, activator of heat shock 90kDa protein ATPase homolog 2 (yeast)
chr17_-_76870222	0.02	ENST00000585421.1	TIMP2	TIMP metallopeptidase inhibitor 2
chr7_-_19157248	0.02	ENST00000242261.5	TWIST1	twist family bHLH transcription factor 1
chr8_-_91658303	0.02	ENST00000458549.2	TMEM64	transmembrane protein 64
chr1_+_65730385	0.02	ENST00000263441.7 ENST00000395325.3	DNAJC6	DnaJ (Hsp40) homolog, subfamily C, member 6
chr5_-_107006596	0.02	ENST00000333274.6	EFNA5	ephrin-A5
chr4_+_166300084	0.02	ENST00000402744.4	CPE	carboxypeptidase E
chr8_-_72987810	0.01	ENST00000262209.4	TRPA1	transient receptor potential cation channel, subfamily A, member 1
chr20_-_45984401	0.01	ENST00000311275.7	ZMYND8	zinc finger, MYND-type containing 8
chr10_+_70480963	0.01	ENST00000265872.6 ENST00000535016.1 ENST00000538031.1 ENST00000543719.1 ENST00000539539.1 ENST00000543225.1 ENST00000536012.1 ENST00000494903.2	CCAR1	cell division cycle and apoptosis regulator 1
chr17_+_27717415	0.01	ENST00000583121.1 ENST00000261716.3	TAOK1	TAO kinase 1
chr4_+_160188889	0.01	ENST00000264431.4	RAPGEF2	Rap guanine nucleotide exchange factor (GEF) 2
chr5_+_172261228	0.01	ENST00000393784.3	ERGIC1	endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
chr16_+_53088885	0.01	ENST00000566029.1 ENST00000447540.1	CHD9	chromodomain helicase DNA binding protein 9
chr2_+_172950227	0.01	ENST00000341900.6	DLX1	distal-less homeobox 1
chr14_+_79745746	0.01	ENST00000281127.7	NRXN3	neurexin 3
chr9_-_86153218	0.01	ENST00000304195.3 ENST00000376438.1	FRMD3	FERM domain containing 3
chr3_+_29322803	0.01	ENST00000396583.3 ENST00000383767.2	RBMS3	RNA binding motif, single stranded interacting protein 3
chr18_+_63418068	0.01	ENST00000397968.2	CDH7	cadherin 7, type 2
chrX_-_77041685	0.01	ENST00000373344.5 ENST00000395603.3	ATRX	alpha thalassemia/mental retardation syndrome X-linked
chrX_+_37865804	0.01	ENST00000297875.2 ENST00000357972.5	SYTL5	synaptotagmin-like 5
chr9_+_91003271	0.01	ENST00000375859.3 ENST00000541629.1	SPIN1	spindlin 1
chr9_-_6015607	0.01	ENST00000259569.5	RANBP6	RAN binding protein 6
chr5_+_134181625	0.01	ENST00000394976.3	C5orf24	chromosome 5 open reading frame 24
chr15_-_56757329	0.01	ENST00000260453.3	MNS1	meiosis-specific nuclear structural 1
chr5_-_131132614	0.01	ENST00000307968.7 ENST00000307954.8	FNIP1	folliculin interacting protein 1
chr17_-_36981556	0.01	ENST00000536127.1 ENST00000225428.5	CWC25	CWC25 spliceosome-associated protein homolog (S. cerevisiae)
chr2_-_27886676	0.01	ENST00000337768.5	SUPT7L	suppressor of Ty 7 (S. cerevisiae)-like
chr3_+_45636219	0.01	ENST00000273317.4	LIMD1	LIM domains containing 1
chr2_-_158485387	0.01	ENST00000243349.8	ACVR1C	activin A receptor, type IC
chr9_-_94186131	0.01	ENST00000297689.3	NFIL3	nuclear factor, interleukin 3 regulated
chr2_+_166095898	0.01	ENST00000424833.1 ENST00000375437.2 ENST00000357398.3	SCN2A	sodium channel, voltage-gated, type II, alpha subunit
chr19_-_7293942	0.01	ENST00000341500.5 ENST00000302850.5	INSR	insulin receptor
chr13_+_96743093	0.01	ENST00000376705.2	HS6ST3	heparan sulfate 6-O-sulfotransferase 3
chrX_+_110339439	0.01	ENST00000372010.1 ENST00000519681.1 ENST00000372007.5	PAK3	p21 protein (Cdc42/Rac)-activated kinase 3
chr3_+_132136331	0.01	ENST00000260818.6	DNAJC13	DnaJ (Hsp40) homolog, subfamily C, member 13
chr8_-_77912431	0.01	ENST00000357039.4 ENST00000522527.1	PEX2	peroxisomal biogenesis factor 2
chr6_+_97372596	0.01	ENST00000369261.4	KLHL32	kelch-like family member 32
chr3_-_178790057	0.01	ENST00000311417.2	ZMAT3	zinc finger, matrin-type 3
chr9_+_82186872	0.01	ENST00000376544.3 ENST00000376520.4	TLE4	transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)
chr20_+_56964169	0.01	ENST00000475243.1	VAPB	VAMP (vesicle-associated membrane protein)-associated protein B and C
chr8_-_72268889	0.01	ENST00000388742.4	EYA1	eyes absent homolog 1 (Drosophila)
chr7_+_31092076	0.01	ENST00000304166.4	ADCYAP1R1	adenylate cyclase activating polypeptide 1 (pituitary) receptor type I
chr15_+_51633826	0.01	ENST00000335449.6	GLDN	gliomedin
chr1_+_111991474	0.01	ENST00000369722.3	ATP5F1	ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1
chr15_-_61521495	0.01	ENST00000335670.6	RORA	RAR-related orphan receptor A
chr11_-_130786400	0.00	ENST00000265909.4	SNX19	sorting nexin 19
chr4_-_103748880	0.00	ENST00000453744.2 ENST00000349311.8	UBE2D3	ubiquitin-conjugating enzyme E2D 3
chr2_-_161350305	0.00	ENST00000348849.3	RBMS1	RNA binding motif, single stranded interacting protein 1
chr14_-_37642016	0.00	ENST00000331299.5	SLC25A21	solute carrier family 25 (mitochondrial oxoadipate carrier), member 21
chr6_-_24911195	0.00	ENST00000259698.4	FAM65B	family with sequence similarity 65, member B
chr11_+_118307179	0.00	ENST00000534358.1 ENST00000531904.2 ENST00000389506.5 ENST00000354520.4	KMT2A	lysine (K)-specific methyltransferase 2A
chr7_+_12250886	0.00	ENST00000444443.1 ENST00000396667.3	TMEM106B	transmembrane protein 106B
chr1_+_91966384	0.00	ENST00000430031.2 ENST00000234626.6	CDC7	cell division cycle 7
chr9_-_135819987	0.00	ENST00000298552.3 ENST00000403810.1	TSC1	tuberous sclerosis 1
chr21_-_16437255	0.00	ENST00000400199.1 ENST00000400202.1	NRIP1	nuclear receptor interacting protein 1
chr3_-_64211112	0.00	ENST00000295902.6	PRICKLE2	prickle homolog 2 (Drosophila)
chr14_+_90863327	0.00	ENST00000356978.4	CALM1	calmodulin 1 (phosphorylase kinase, delta)
chr5_+_109025067	0.00	ENST00000261483.4	MAN2A1	mannosidase, alpha, class 2A, member 1
chr2_-_178937478	0.00	ENST00000286063.6	PDE11A	phosphodiesterase 11A
chr1_+_26798955	0.00	ENST00000361427.5	HMGN2	high mobility group nucleosomal binding domain 2
chr1_+_46668994	0.00	ENST00000371980.3	LURAP1	leucine rich adaptor protein 1
chr17_+_45608430	0.00	ENST00000322157.4	NPEPPS	aminopeptidase puromycin sensitive
chr7_-_86688990	0.00	ENST00000450689.2	KIAA1324L	KIAA1324-like
chr10_-_27443155	0.00	ENST00000427324.1 ENST00000326799.3	YME1L1	YME1-like 1 ATPase
chr14_+_57046500	0.00	ENST00000261556.6	TMEM260	transmembrane protein 260
chr21_-_15755446	0.00	ENST00000544452.1 ENST00000285667.3	HSPA13	heat shock protein 70kDa family, member 13
chr18_+_22040593	0.00	ENST00000256906.4	HRH4	histamine receptor H4
chr10_+_72575643	0.00	ENST00000373202.3	SGPL1	sphingosine-1-phosphate lyase 1
chr12_-_56583332	0.00	ENST00000347471.4 ENST00000267064.4 ENST00000394023.3	SMARCC2	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2
chr1_-_22109682	0.00	ENST00000400301.1 ENST00000532737.1	USP48	ubiquitin specific peptidase 48
chr11_-_106889250	0.00	ENST00000526355.2	GUCY1A2	guanylate cyclase 1, soluble, alpha 2
chr8_+_30891298	0.00	ENST00000298139.5	WRN	Werner syndrome, RecQ helicase-like
chr16_-_2264779	0.00	ENST00000333503.7	PGP	phosphoglycolate phosphatase
chr2_+_32582086	0.00	ENST00000421745.2	BIRC6	baculoviral IAP repeat containing 6
chr2_-_27938593	0.00	ENST00000379677.2	AC074091.13	Uncharacterized protein
chr3_+_58291965	0.00	ENST00000445193.3 ENST00000295959.5 ENST00000466547.1	RPP14	ribonuclease P/MRP 14kDa subunit
chr4_-_42154895	0.00	ENST00000502486.1 ENST00000504360.1	BEND4	BEN domain containing 4
chr15_+_59279851	0.00	ENST00000348370.4 ENST00000434298.1 ENST00000559160.1	RNF111	ring finger protein 111
chr1_+_193091080	0.00	ENST00000367435.3	CDC73	cell division cycle 73
chr6_-_99873145	0.00	ENST00000369239.5 ENST00000438806.1	PNISR	PNN-interacting serine/arginine-rich protein
chr15_-_34394119	0.00	ENST00000256545.4	EMC7	ER membrane protein complex subunit 7
chr3_+_85008089	0.00	ENST00000383699.3	CADM2	cell adhesion molecule 2
chr6_+_117586713	0.00	ENST00000352536.3 ENST00000326274.5	VGLL2	vestigial like 2 (Drosophila)
chr20_-_10654639	0.00	ENST00000254958.5	JAG1	jagged 1
chr1_-_40137710	0.00	ENST00000235628.1	NT5C1A	5'-nucleotidase, cytosolic IA
chr2_-_100939195	0.00	ENST00000393437.3	LONRF2	LON peptidase N-terminal domain and ring finger 2
chr2_+_14772810	0.00	ENST00000295092.2 ENST00000331243.4	FAM84A	family with sequence similarity 84, member A
chr12_-_29534074	0.00	ENST00000546839.1 ENST00000360150.4 ENST00000552155.1 ENST00000550353.1 ENST00000548441.1 ENST00000552132.1	ERGIC2	ERGIC and golgi 2
chr1_-_70671216	0.00	ENST00000370952.3	LRRC40	leucine rich repeat containing 40
chr17_+_59529743	0.00	ENST00000589003.1 ENST00000393853.4	TBX4	T-box 4
chr1_+_50574585	0.00	ENST00000371824.1 ENST00000371823.4	ELAVL4	ELAV like neuron-specific RNA binding protein 4
chr11_-_31839488	0.00	ENST00000419022.1 ENST00000379132.3 ENST00000379129.2	PAX6	paired box 6
chr1_+_47137445	0.00	ENST00000569393.1 ENST00000334122.4 ENST00000415500.1	TEX38	testis expressed 38
chr12_+_22778009	0.00	ENST00000266517.4 ENST00000335148.3	ETNK1	ethanolamine kinase 1
chr18_+_59854480	0.00	ENST00000256858.6 ENST00000398130.2	KIAA1468	KIAA1468
chr13_-_77900814	0.00	ENST00000544440.2	MYCBP2	MYC binding protein 2, E3 ubiquitin protein ligase
chr9_+_77703414	0.00	ENST00000346234.6	OSTF1	osteoclast stimulating factor 1
chr3_-_72496035	0.00	ENST00000477973.2	RYBP	RING1 and YY1 binding protein
chr1_-_213189108	0.00	ENST00000535388.1	ANGEL2	angel homolog 2 (Drosophila)
chr5_+_135364584	0.00	ENST00000442011.2 ENST00000305126.8	TGFBI	transforming growth factor, beta-induced, 68kDa
chr20_+_306221	0.00	ENST00000342665.2	SOX12	SRY (sex determining region Y)-box 12
chr16_-_87525651	0.00	ENST00000268616.4	ZCCHC14	zinc finger, CCHC domain containing 14
chr5_-_147162078	0.00	ENST00000507386.1	JAKMIP2	janus kinase and microtubule interacting protein 2
chr2_+_30369807	0.00	ENST00000379520.3 ENST00000379519.3 ENST00000261353.4	YPEL5	yippee-like 5 (Drosophila)
chr14_-_25519095	0.00	ENST00000419632.2 ENST00000358326.2 ENST00000396700.1 ENST00000548724.1	STXBP6	syntaxin binding protein 6 (amisyn)
chr11_+_105480793	0.00	ENST00000282499.5 ENST00000393127.2 ENST00000527669.1	GRIA4	glutamate receptor, ionotropic, AMPA 4
chrX_-_118986911	0.00	ENST00000276201.2 ENST00000345865.2	UPF3B	UPF3 regulator of nonsense transcripts homolog B (yeast)
chr16_-_62070305	0.00	ENST00000584337.1	CDH8	cadherin 8, type 2
chr7_-_130080977	0.00	ENST00000223208.5	CEP41	centrosomal protein 41kDa
chr5_+_140560980	0.00	ENST00000361016.2	PCDHB16	protocadherin beta 16
chr6_+_163148161	0.00	ENST00000337019.3 ENST00000366889.2	PACRG	PARK2 co-regulated
chr2_-_38978492	0.00	ENST00000409276.1 ENST00000446327.2 ENST00000313117.6	SRSF7	serine/arginine-rich splicing factor 7
chr18_+_9913977	0.00	ENST00000400000.2 ENST00000340541.4	VAPA	VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa
chr1_-_108507631	0.00	ENST00000527011.1 ENST00000370056.4	VAV3	vav 3 guanine nucleotide exchange factor
chr4_-_53525406	0.00	ENST00000451218.2 ENST00000441222.3	USP46	ubiquitin specific peptidase 46
chr10_+_112679301	0.00	ENST00000265277.5 ENST00000369452.4	SHOC2	soc-2 suppressor of clear homolog (C. elegans)
chr12_-_54673871	0.00	ENST00000209875.4	CBX5	chromobox homolog 5
chr19_-_55954230	0.00	ENST00000376325.4	SHISA7	shisa family member 7

Gene overrepresentation in biological_process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0061428	negative regulation of transcription from RNA polymerase II promoter in response to hypoxia(GO:0061428)
0.0	0.0	GO:0070428	negative regulation of interleukin-23 production(GO:0032707) regulation of nucleotide-binding oligomerization domain containing 1 signaling pathway(GO:0070428)