ISMARA results: CACCUCC

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ENCODE cell lines, expression (Ernst 2011)

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Results for CACCUCC

Z-value: 0.07

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miRNA associated with seed CACCUCC

Name	miRBASE accession
hsa-miR-1306-5p miRBase	MIMAT0022726

Activity profile of CACCUCC motif

Sorted Z-values of CACCUCC motif

Network of associatons between targets according to the STRING database.

First level regulatory network of CACCUCC

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Promoter	Score	Transcript	Gene	Gene Info
chr8_+_56014949	0.03	ENST00000327381.6	XKR4	XK, Kell blood group complex subunit-related family, member 4
chr8_+_61591337	0.02	ENST00000423902.2	CHD7	chromodomain helicase DNA binding protein 7
chr1_+_46972668	0.02	ENST00000371956.4 ENST00000360032.3	DMBX1	diencephalon/mesencephalon homeobox 1
chr9_-_123691047	0.02	ENST00000373887.3	TRAF1	TNF receptor-associated factor 1
chr15_+_90544532	0.01	ENST00000268154.4	ZNF710	zinc finger protein 710
chr9_-_130829588	0.01	ENST00000373078.4	NAIF1	nuclear apoptosis inducing factor 1
chr11_-_45687128	0.01	ENST00000308064.2	CHST1	carbohydrate (keratan sulfate Gal-6) sulfotransferase 1
chr14_+_23776024	0.01	ENST00000553781.1 ENST00000556100.1 ENST00000557236.1 ENST00000557579.1	BCL2L2-PABPN1 BCL2L2	BCL2L2-PABPN1 readthrough BCL2-like 2
chr14_+_23790655	0.01	ENST00000397276.2	PABPN1	poly(A) binding protein, nuclear 1
chr9_+_35749203	0.01	ENST00000456972.2 ENST00000378078.4	RGP1	RGP1 retrograde golgi transport homolog (S. cerevisiae)

Showing 1 to 10 of 27 entries

Gene Ontology Analysis