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ENCODE cell lines, expression (Ernst 2011)

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Results for NANOG

Z-value: 0.86

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Transcription factors associated with NANOG

Gene Symbol Gene ID Gene Info
NANOG
ENSG00000111704.6 NANOG

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
NANOGhg19_v2_chr12_+_7941989_79420140.302.7e-01Click!

Activity profile of NANOG motif

Sorted Z-values of NANOG motif

Network of associatons between targets according to the STRING database.

First level regulatory network of NANOG

PNG image of the network

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Top targets:

Promoter Score Transcript Gene Gene Info
chr6_+_32407619 1.37 ENST00000395388.2
ENST00000374982.5
 HLA-DRA
 major histocompatibility complex, class II, DR alpha
chr14_+_21156915 1.36 ENST00000397990.4
ENST00000555597.1
 ANG
RNASE4
 angiogenin, ribonuclease, RNase A family, 5
ribonuclease, RNase A family, 4
chr8_-_27468842 1.22 ENST00000523500.1
 CLU
 clusterin
chr5_+_156693091 1.18 ENST00000318218.6
ENST00000442283.2
ENST00000522463.1
ENST00000521420.1
 CYFIP2
 cytoplasmic FMR1 interacting protein 2
chr2_+_170590321 1.11 ENST00000392647.2
 KLHL23
 kelch-like family member 23
chr3_-_52567792 1.11 ENST00000307092.4
ENST00000422318.2
ENST00000459839.1
 NT5DC2
 5'-nucleotidase domain containing 2
chr8_-_27468945 1.03 ENST00000405140.3
 CLU
 clusterin
chr9_+_71820057 1.02 ENST00000539225.1
 TJP2
 tight junction protein 2
chr9_+_71819927 1.02 ENST00000535702.1
 TJP2
 tight junction protein 2
chr19_+_926000 1.00 ENST00000263620.3
 ARID3A
 AT rich interactive domain 3A (BRIGHT-like)
chr8_-_27469196 0.98 ENST00000546343.1
ENST00000560566.1
 CLU
 clusterin
chr5_+_156693159 0.96 ENST00000347377.6
 CYFIP2
 cytoplasmic FMR1 interacting protein 2
chrX_-_118827333 0.91 ENST00000360156.7
ENST00000354228.4
ENST00000489216.1
ENST00000354416.3
ENST00000394610.1
ENST00000343984.5
 SEPT6
 septin 6
chr12_-_123201337 0.77 ENST00000528880.2
 HCAR3
 hydroxycarboxylic acid receptor 3
chr11_-_67205538 0.76 ENST00000326294.3
 PTPRCAP
 protein tyrosine phosphatase, receptor type, C-associated protein
chr4_-_16077741 0.71 ENST00000447510.2
ENST00000540805.1
ENST00000539194.1
 PROM1
 prominin 1
chr6_-_43021437 0.67 ENST00000265348.3
 CUL7
 cullin 7
chr19_+_42381173 0.65 ENST00000221972.3
 CD79A
 CD79a molecule, immunoglobulin-associated alpha
chr19_-_39342962 0.64 ENST00000600873.1
 HNRNPL
 heterogeneous nuclear ribonucleoprotein L
chr20_-_61557821 0.61 ENST00000354665.4
ENST00000370368.1
ENST00000395343.1
ENST00000395340.1
 DIDO1
 death inducer-obliterator 1
chr4_+_79567362 0.61 ENST00000512322.1
 RP11-792D21.2
 long intergenic non-protein coding RNA 1094
chr5_-_169816638 0.58 ENST00000521859.1
ENST00000274629.4
 KCNMB1
 potassium large conductance calcium-activated channel, subfamily M, beta member 1
chr6_-_43021612 0.58 ENST00000535468.1
 CUL7
 cullin 7
chr8_+_42752053 0.58 ENST00000307602.4
 HOOK3
 hook microtubule-tethering protein 3
chr4_-_16900184 0.58 ENST00000515064.1
 LDB2
 LIM domain binding 2
chr7_+_102715315 0.57 ENST00000428183.2
ENST00000323716.3
ENST00000441711.2
ENST00000454559.1
ENST00000425331.1
ENST00000541300.1
 ARMC10
 armadillo repeat containing 10
chr1_-_150241341 0.57 ENST00000369109.3
ENST00000414276.2
ENST00000236017.5
 APH1A
 APH1A gamma secretase subunit
chr17_-_34417479 0.57 ENST00000225245.5
 CCL3
 chemokine (C-C motif) ligand 3
chr12_-_123187890 0.56 ENST00000328880.5
 HCAR2
 hydroxycarboxylic acid receptor 2
chr4_-_16900217 0.53 ENST00000441778.2
 LDB2
 LIM domain binding 2
chr11_-_46142948 0.53 ENST00000257821.4
 PHF21A
 PHD finger protein 21A
chr4_+_79567314 0.53 ENST00000503539.1
ENST00000504675.1
 RP11-792D21.2
 long intergenic non-protein coding RNA 1094
chr6_+_292459 0.52 ENST00000419235.2
ENST00000605035.1
ENST00000605863.1
 DUSP22
 dual specificity phosphatase 22
chr6_+_148663729 0.52 ENST00000367467.3
 SASH1
 SAM and SH3 domain containing 1
chr4_-_16900242 0.50 ENST00000502640.1
ENST00000506732.1
 LDB2
 LIM domain binding 2
chr3_-_15469006 0.48 ENST00000443029.1
ENST00000383790.3
ENST00000383789.5
 METTL6
 methyltransferase like 6
chr5_-_33892204 0.46 ENST00000504830.1
 ADAMTS12
 ADAM metallopeptidase with thrombospondin type 1 motif, 12
chr1_+_161632937 0.45 ENST00000236937.9
ENST00000367961.4
ENST00000358671.5
 FCGR2B
 Fc fragment of IgG, low affinity IIb, receptor (CD32)
chr6_+_292051 0.45 ENST00000344450.5
 DUSP22
 dual specificity phosphatase 22
chr4_-_16900410 0.45 ENST00000304523.5
 LDB2
 LIM domain binding 2
chr18_+_13218769 0.43 ENST00000399848.3
ENST00000361205.4
 LDLRAD4
 low density lipoprotein receptor class A domain containing 4
chr20_-_21494654 0.41 ENST00000377142.4
 NKX2-2
 NK2 homeobox 2
chr6_+_31540056 0.39 ENST00000418386.2
 LTA
 lymphotoxin alpha
chr2_+_64681641 0.38 ENST00000409537.2
 LGALSL
 lectin, galactoside-binding-like
chr3_+_128968437 0.38 ENST00000314797.6
 COPG1
 coatomer protein complex, subunit gamma 1
chr19_-_42806444 0.37 ENST00000594989.1
 PAFAH1B3
 platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)
chr2_-_97405775 0.37 ENST00000264963.4
ENST00000537039.1
ENST00000377079.4
ENST00000426463.2
ENST00000534882.1
 LMAN2L
 lectin, mannose-binding 2-like
chr12_-_101604185 0.37 ENST00000536262.2
 SLC5A8
 solute carrier family 5 (sodium/monocarboxylate cotransporter), member 8
chr21_-_34960930 0.35 ENST00000437395.1
 DONSON
 downstream neighbor of SON
chr1_+_44870866 0.34 ENST00000355387.2
ENST00000361799.2
 RNF220
 ring finger protein 220
chr3_-_49851313 0.34 ENST00000333486.3
 UBA7
 ubiquitin-like modifier activating enzyme 7
chr3_-_98241358 0.33 ENST00000503004.1
ENST00000506575.1
ENST00000513452.1
ENST00000515620.1
 CLDND1
 claudin domain containing 1
chr2_-_214016314 0.31 ENST00000434687.1
ENST00000374319.4
 IKZF2
 IKAROS family zinc finger 2 (Helios)
chr19_-_36870087 0.31 ENST00000270001.7
 ZFP14
 ZFP14 zinc finger protein
chr1_-_92952433 0.30 ENST00000294702.5
 GFI1
 growth factor independent 1 transcription repressor
chr11_-_72504637 0.30 ENST00000536377.1
ENST00000359373.5
 STARD10
ARAP1
 StAR-related lipid transfer (START) domain containing 10
ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
chr11_+_63870660 0.30 ENST00000246841.3
 FLRT1
 fibronectin leucine rich transmembrane protein 1
chr16_+_30759700 0.29 ENST00000328273.7
 PHKG2
 phosphorylase kinase, gamma 2 (testis)
chr5_-_115872142 0.28 ENST00000510263.1
 SEMA6A
 sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
chr3_+_121774202 0.27 ENST00000469710.1
ENST00000493101.1
ENST00000330540.2
ENST00000264468.5
 CD86
 CD86 molecule
chr6_+_30524663 0.27 ENST00000376560.3
 PRR3
 proline rich 3
chr1_+_161551101 0.26 ENST00000367962.4
ENST00000367960.5
ENST00000403078.3
ENST00000428605.2
 FCGR2B
 Fc fragment of IgG, low affinity IIb, receptor (CD32)
chr6_+_151561085 0.26 ENST00000402676.2
 AKAP12
 A kinase (PRKA) anchor protein 12
chr14_-_98444386 0.26 ENST00000556462.1
ENST00000556138.1
 C14orf64
 chromosome 14 open reading frame 64
chr10_-_1034237 0.26 ENST00000381466.1
 AL359878.1
 Uncharacterized protein
chr19_+_4969116 0.25 ENST00000588337.1
ENST00000159111.4
ENST00000381759.4
 KDM4B
 lysine (K)-specific demethylase 4B
chr6_+_30525051 0.24 ENST00000376557.3
 PRR3
 proline rich 3
chr16_+_3508063 0.24 ENST00000576787.1
ENST00000572942.1
ENST00000576916.1
ENST00000575076.1
ENST00000572131.1
 NAA60
 N(alpha)-acetyltransferase 60, NatF catalytic subunit
chr1_-_28520384 0.23 ENST00000305392.3
 PTAFR
 platelet-activating factor receptor
chr5_+_32585605 0.23 ENST00000265073.4
ENST00000515355.1
ENST00000502897.1
ENST00000510442.1
 SUB1
 SUB1 homolog (S. cerevisiae)
chr14_+_23791159 0.22 ENST00000557702.1
 PABPN1
 poly(A) binding protein, nuclear 1
chr19_-_13213662 0.22 ENST00000264824.4
 LYL1
 lymphoblastic leukemia derived sequence 1
chr17_-_61777459 0.21 ENST00000578993.1
ENST00000583211.1
ENST00000259006.3
 LIMD2
 LIM domain containing 2
chr22_-_32026810 0.21 ENST00000266095.5
ENST00000397500.1
 PISD
 phosphatidylserine decarboxylase
chr2_+_45878790 0.20 ENST00000306156.3
 PRKCE
 protein kinase C, epsilon
chr16_+_3507985 0.19 ENST00000421765.3
ENST00000360862.5
ENST00000414063.2
ENST00000610180.1
ENST00000608993.1
 NAA60
NAA60
 N(alpha)-acetyltransferase 60, NatF catalytic subunit
N-alpha-acetyltransferase 60
chr16_+_30759563 0.19 ENST00000563588.1
ENST00000565924.1
ENST00000424889.3
 PHKG2
 phosphorylase kinase, gamma 2 (testis)
chr6_-_136610911 0.18 ENST00000530767.1
ENST00000527759.1
ENST00000527536.1
ENST00000529826.1
ENST00000531224.1
ENST00000353331.4
 BCLAF1
 BCL2-associated transcription factor 1
chr10_+_69644404 0.18 ENST00000212015.6
 SIRT1
 sirtuin 1
chr4_+_166248775 0.18 ENST00000261507.6
ENST00000507013.1
ENST00000393766.2
ENST00000504317.1
 MSMO1
 methylsterol monooxygenase 1
chr7_+_131012605 0.18 ENST00000446815.1
ENST00000352689.6
 MKLN1
 muskelin 1, intracellular mediator containing kelch motifs
chr3_-_149093499 0.17 ENST00000472441.1
 TM4SF1
 transmembrane 4 L six family member 1
chr19_-_42806723 0.17 ENST00000262890.3
 PAFAH1B3
 platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)
chr12_-_25055177 0.16 ENST00000538118.1
 BCAT1
 branched chain amino-acid transaminase 1, cytosolic
chr15_+_73976715 0.15 ENST00000558689.1
ENST00000560786.2
ENST00000561213.1
ENST00000563584.1
ENST00000561416.1
 CD276
 CD276 molecule
chr17_-_56065484 0.15 ENST00000581208.1
 VEZF1
 vascular endothelial zinc finger 1
chr6_-_30524951 0.15 ENST00000376621.3
 GNL1
 guanine nucleotide binding protein-like 1
chr1_+_36348790 0.15 ENST00000373204.4
 AGO1
 argonaute RISC catalytic component 1
chr19_-_42806919 0.14 ENST00000595530.1
ENST00000538771.1
ENST00000601865.1
 PAFAH1B3
 platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)
chr22_+_41487711 0.14 ENST00000263253.7
 EP300
 E1A binding protein p300
chr22_+_26565440 0.13 ENST00000404234.3
ENST00000529632.2
ENST00000360929.3
ENST00000248933.6
ENST00000343706.4
 SEZ6L
 seizure related 6 homolog (mouse)-like
chr19_-_39926555 0.12 ENST00000599539.1
ENST00000339471.4
ENST00000601655.1
ENST00000251453.3
 RPS16
 ribosomal protein S16
chr3_+_15468862 0.12 ENST00000396842.2
 EAF1
 ELL associated factor 1
chr2_-_240322643 0.12 ENST00000345617.3
 HDAC4
 histone deacetylase 4
chr6_+_34204642 0.12 ENST00000347617.6
ENST00000401473.3
ENST00000311487.5
ENST00000447654.1
ENST00000395004.3
 HMGA1
 high mobility group AT-hook 1
chr15_-_78526855 0.12 ENST00000541759.1
ENST00000558130.1
 ACSBG1
 acyl-CoA synthetase bubblegum family member 1
chr22_-_30662828 0.12 ENST00000403463.1
ENST00000215781.2
 OSM
 oncostatin M
chr4_+_154073469 0.11 ENST00000441616.1
 TRIM2
 tripartite motif containing 2
chr19_+_50084561 0.11 ENST00000246794.5
 PRRG2
 proline rich Gla (G-carboxyglutamic acid) 2
chrX_+_47082408 0.11 ENST00000518022.1
ENST00000276052.6
 CDK16
 cyclin-dependent kinase 16
chr5_-_55290773 0.11 ENST00000502326.3
ENST00000381298.2
 IL6ST
 interleukin 6 signal transducer (gp130, oncostatin M receptor)
chr3_+_38388251 0.10 ENST00000427323.1
ENST00000207870.3
ENST00000542835.1
 XYLB
 xylulokinase homolog (H. influenzae)
chr19_-_39926268 0.09 ENST00000599705.1
 RPS16
 ribosomal protein S16
chr10_-_69455873 0.08 ENST00000433211.2
 CTNNA3
 catenin (cadherin-associated protein), alpha 3
chr10_-_48390973 0.08 ENST00000224600.4
 RBP3
 retinol binding protein 3, interstitial
chr17_-_72542278 0.08 ENST00000330793.1
 CD300C
 CD300c molecule
chr12_+_57828521 0.08 ENST00000309668.2
 INHBC
 inhibin, beta C
chr2_-_175113301 0.08 ENST00000344357.5
ENST00000284719.3
 OLA1
 Obg-like ATPase 1
chr2_-_69664586 0.07 ENST00000303698.3
ENST00000394305.1
ENST00000410022.2
 NFU1
 NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)
chr10_-_70092635 0.07 ENST00000309049.4
 PBLD
 phenazine biosynthesis-like protein domain containing
chr19_-_42806842 0.06 ENST00000596265.1
 PAFAH1B3
 platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)
chr6_+_88032299 0.05 ENST00000608353.1
ENST00000392863.1
ENST00000229570.5
ENST00000608525.1
ENST00000608868.1
 SMIM8
 small integral membrane protein 8
chr11_-_57004658 0.05 ENST00000606794.1
 APLNR
 apelin receptor
chr1_+_47264711 0.05 ENST00000371923.4
ENST00000271153.4
ENST00000371919.4
 CYP4B1
 cytochrome P450, family 4, subfamily B, polypeptide 1
chr17_+_75372165 0.04 ENST00000427674.2
 SEPT9
 septin 9
chrX_+_47092314 0.04 ENST00000218348.3
 USP11
 ubiquitin specific peptidase 11
chr1_+_27719148 0.02 ENST00000374024.3
 GPR3
 G protein-coupled receptor 3
chr12_+_69080734 0.02 ENST00000378905.2
 NUP107
 nucleoporin 107kDa
chr19_+_8455077 0.02 ENST00000328024.6
 RAB11B
 RAB11B, member RAS oncogene family
chr8_-_102181718 0.02 ENST00000565617.1
 KB-1460A1.5
 KB-1460A1.5
chr10_+_102891048 0.02 ENST00000467928.2
 TLX1
 T-cell leukemia homeobox 1
chr6_-_43484621 0.02 ENST00000506469.1
ENST00000503972.1
 YIPF3
 Yip1 domain family, member 3
chr3_-_45837959 0.02 ENST00000353278.4
ENST00000456124.2
 SLC6A20
 solute carrier family 6 (proline IMINO transporter), member 20
chr1_-_202129704 0.02 ENST00000476061.1
ENST00000544762.1
ENST00000467283.1
ENST00000464870.1
ENST00000435759.2
ENST00000486116.1
ENST00000543735.1
ENST00000308986.5
ENST00000477625.1
 PTPN7
 protein tyrosine phosphatase, non-receptor type 7
chr17_+_7387677 0.01 ENST00000322644.6
 POLR2A
 polymerase (RNA) II (DNA directed) polypeptide A, 220kDa

Gene Ontology Analysis

Gene overrepresentation in molecular_function category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 1.4 GO:0004522 ribonuclease A activity(GO:0004522)
0.2 2.1 GO:0030274 LIM domain binding(GO:0030274)
0.2 0.7 GO:0019770 IgG receptor activity(GO:0019770)
0.2 3.2 GO:0051787 misfolded protein binding(GO:0051787)
0.2 0.8 GO:0047179 platelet-activating factor acetyltransferase activity(GO:0047179)
0.1 0.6 GO:0004698 calcium-dependent protein kinase C activity(GO:0004698)
0.1 1.1 GO:0008253 5'-nucleotidase activity(GO:0008253)
0.1 1.4 GO:0032395 MHC class II receptor activity(GO:0032395)
0.1 0.8 GO:0097157 pre-mRNA intronic binding(GO:0097157)
0.1 0.2 GO:0004609 phosphatidylserine decarboxylase activity(GO:0004609)
0.1 0.3 GO:0004839 ubiquitin activating enzyme activity(GO:0004839)
0.1 2.0 GO:0004385 guanylate kinase activity(GO:0004385)
0.1 0.5 GO:0004689 phosphorylase kinase activity(GO:0004689)
0.0 0.2 GO:0035276 ethanol binding(GO:0035276)
0.0 0.2 GO:0004992 platelet activating factor receptor activity(GO:0004992)
0.0 0.2 GO:0043398 HLH domain binding(GO:0043398)
0.0 0.1 GO:0004915 interleukin-6 receptor activity(GO:0004915) oncostatin-M receptor activity(GO:0004924) interleukin-6 binding(GO:0019981)
0.0 0.4 GO:0004596 peptide alpha-N-acetyltransferase activity(GO:0004596)
0.0 0.3 GO:0051864 histone demethylase activity (H3-K36 specific)(GO:0051864)
0.0 0.1 GO:0001025 RNA polymerase III transcription factor binding(GO:0001025)
0.0 0.2 GO:0052654 branched-chain-amino-acid transaminase activity(GO:0004084) L-leucine transaminase activity(GO:0052654) L-valine transaminase activity(GO:0052655) L-isoleucine transaminase activity(GO:0052656)
0.0 0.5 GO:0031435 mitogen-activated protein kinase kinase kinase binding(GO:0031435)
0.0 0.6 GO:0051959 dynein light intermediate chain binding(GO:0051959)
0.0 0.6 GO:0015269 calcium-activated potassium channel activity(GO:0015269)
0.0 0.9 GO:0008138 protein tyrosine/serine/threonine phosphatase activity(GO:0008138)
0.0 0.4 GO:0005537 mannose binding(GO:0005537)
0.0 0.3 GO:0031702 type 1 angiotensin receptor binding(GO:0031702)
0.0 0.3 GO:0008179 adenylate cyclase binding(GO:0008179)
0.0 0.7 GO:0042805 actinin binding(GO:0042805)
0.0 0.5 GO:0004407 histone deacetylase activity(GO:0004407)
0.0 0.3 GO:0005104 fibroblast growth factor receptor binding(GO:0005104)

Gene overrepresentation in C2:CP:REACTOME category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 2.0 REACTOME APOPTOTIC CLEAVAGE OF CELL ADHESION PROTEINS Genes involved in Apoptotic cleavage of cell adhesion proteins
0.0 0.6 REACTOME SIGNALING BY NOTCH2 Genes involved in Signaling by NOTCH2
0.0 0.5 REACTOME GLYCOGEN BREAKDOWN GLYCOGENOLYSIS Genes involved in Glycogen breakdown (glycogenolysis)
0.0 3.0 REACTOME RESPONSE TO ELEVATED PLATELET CYTOSOLIC CA2 Genes involved in Response to elevated platelet cytosolic Ca2+
0.0 1.2 REACTOME ACTIVATION OF CHAPERONE GENES BY XBP1S Genes involved in Activation of Chaperone Genes by XBP1(S)
0.0 0.7 REACTOME ANTIGEN ACTIVATES B CELL RECEPTOR LEADING TO GENERATION OF SECOND MESSENGERS Genes involved in Antigen Activates B Cell Receptor Leading to Generation of Second Messengers
0.0 0.1 REACTOME APOBEC3G MEDIATED RESISTANCE TO HIV1 INFECTION Genes involved in APOBEC3G mediated resistance to HIV-1 infection
0.0 0.6 REACTOME CGMP EFFECTS Genes involved in cGMP effects
0.0 0.4 REACTOME REGULATION OF GENE EXPRESSION IN BETA CELLS Genes involved in Regulation of gene expression in beta cells
0.0 0.2 REACTOME PROCESSING OF INTRONLESS PRE MRNAS Genes involved in Processing of Intronless Pre-mRNAs
0.0 0.3 REACTOME OTHER SEMAPHORIN INTERACTIONS Genes involved in Other semaphorin interactions

Gene overrepresentation in C2:CP category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 5.7 PID MYC REPRESS PATHWAY Validated targets of C-MYC transcriptional repression
0.0 1.6 PID IL12 STAT4 PATHWAY IL12 signaling mediated by STAT4
0.0 1.9 PID ECADHERIN STABILIZATION PATHWAY Stabilization and expansion of the E-cadherin adherens junction
0.0 0.6 PID SYNDECAN 3 PATHWAY Syndecan-3-mediated signaling events
0.0 0.6 PID LIS1 PATHWAY Lissencephaly gene (LIS1) in neuronal migration and development
0.0 1.4 PID BCR 5PATHWAY BCR signaling pathway
0.0 0.1 PID IL27 PATHWAY IL27-mediated signaling events
0.0 0.4 PID IL2 STAT5 PATHWAY IL2 signaling events mediated by STAT5
0.0 0.3 PID HDAC CLASSIII PATHWAY Signaling events mediated by HDAC Class III
0.0 0.6 PID IL12 2PATHWAY IL12-mediated signaling events
0.0 0.2 PID LPA4 PATHWAY LPA4-mediated signaling events

Gene overrepresentation in cellular_component category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 1.2 GO:1990393 3M complex(GO:1990393)
0.2 1.4 GO:0032311 angiogenin-PRI complex(GO:0032311)
0.2 3.2 GO:0097418 neurofibrillary tangle(GO:0097418)
0.1 0.6 GO:0070695 FHF complex(GO:0070695)
0.1 0.7 GO:0019815 B cell receptor complex(GO:0019815)
0.1 1.4 GO:0042613 MHC class II protein complex(GO:0042613)
0.1 0.9 GO:0097227 sperm annulus(GO:0097227)
0.1 0.5 GO:0005964 phosphorylase kinase complex(GO:0005964)
0.1 0.6 GO:0070765 gamma-secretase complex(GO:0070765)
0.0 0.7 GO:0042622 photoreceptor outer segment membrane(GO:0042622)
0.0 0.3 GO:0046581 intercellular canaliculus(GO:0046581)
0.0 0.4 GO:0030126 COPI vesicle coat(GO:0030126)
0.0 0.2 GO:0033553 rDNA heterochromatin(GO:0033553)
0.0 0.1 GO:0005896 interleukin-6 receptor complex(GO:0005896)
0.0 0.1 GO:0035068 micro-ribonucleoprotein complex(GO:0035068)
0.0 1.0 GO:0031463 Cul3-RING ubiquitin ligase complex(GO:0031463)
0.0 0.2 GO:0042405 nuclear inclusion body(GO:0042405)
0.0 1.7 GO:0005923 bicellular tight junction(GO:0005923)
0.0 0.1 GO:0035985 senescence-associated heterochromatin focus(GO:0035985)
0.0 0.3 GO:0044298 neuronal cell body membrane(GO:0032809) cell body membrane(GO:0044298)

Gene overrepresentation in biological_process category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 3.2 GO:0061518 macrophage proliferation(GO:0061517) microglial cell proliferation(GO:0061518) regulation of neuronal signal transduction(GO:1902847) positive regulation of neurofibrillary tangle assembly(GO:1902998)
0.3 1.4 GO:0002503 peptide antigen assembly with MHC class II protein complex(GO:0002503)
0.3 1.4 GO:0006651 diacylglycerol biosynthetic process(GO:0006651)
0.3 2.1 GO:0051388 positive regulation of neurotrophin TRK receptor signaling pathway(GO:0051388)
0.2 0.7 GO:0002316 follicular B cell differentiation(GO:0002316) negative regulation of dendritic cell antigen processing and presentation(GO:0002605) regulation of cytotoxic T cell degranulation(GO:0043317) negative regulation of cytotoxic T cell degranulation(GO:0043318)
0.2 2.0 GO:0071847 TNFSF11-mediated signaling pathway(GO:0071847)
0.2 0.6 GO:1903413 cellular response to bile acid(GO:1903413)
0.2 0.7 GO:2000768 glomerular parietal epithelial cell differentiation(GO:0072139) positive regulation of nephron tubule epithelial cell differentiation(GO:2000768)
0.1 0.6 GO:0022027 interkinetic nuclear migration(GO:0022027)
0.1 0.4 GO:0021529 spinal cord oligodendrocyte cell differentiation(GO:0021529) spinal cord oligodendrocyte cell fate specification(GO:0021530) oligodendrocyte cell fate specification(GO:0021778) oligodendrocyte cell fate commitment(GO:0021779) glial cell fate specification(GO:0021780)
0.1 0.4 GO:0002874 regulation of chronic inflammatory response to antigenic stimulus(GO:0002874)
0.1 0.5 GO:1902498 regulation of protein autoubiquitination(GO:1902498)
0.1 0.6 GO:0033031 positive regulation of neutrophil apoptotic process(GO:0033031)
0.1 0.3 GO:0070105 positive regulation of interleukin-6-mediated signaling pathway(GO:0070105)
0.1 0.5 GO:1901509 regulation of endothelial tube morphogenesis(GO:1901509)
0.1 0.3 GO:0042109 negative regulation of tolerance induction(GO:0002644) lymphotoxin A production(GO:0032641) interleukin-4 biosynthetic process(GO:0042097) lymphotoxin A biosynthetic process(GO:0042109) regulation of interleukin-4 biosynthetic process(GO:0045402) positive regulation of interleukin-4 biosynthetic process(GO:0045404)
0.1 0.4 GO:0017196 N-terminal peptidyl-methionine acetylation(GO:0017196)
0.1 0.6 GO:2000503 positive regulation of natural killer cell chemotaxis(GO:2000503)
0.1 0.5 GO:0045819 positive regulation of glycogen catabolic process(GO:0045819)
0.1 0.2 GO:1904300 positive regulation of neutrophil degranulation(GO:0043315) cellular response to gravity(GO:0071258) positive regulation of neutrophil activation(GO:1902565) regulation of transcytosis(GO:1904298) positive regulation of transcytosis(GO:1904300) regulation of maternal process involved in parturition(GO:1904301) positive regulation of maternal process involved in parturition(GO:1904303) response to 2-O-acetyl-1-O-hexadecyl-sn-glycero-3-phosphocholine(GO:1904316) cellular response to 2-O-acetyl-1-O-hexadecyl-sn-glycero-3-phosphocholine(GO:1904317)
0.1 0.3 GO:0030037 actin filament reorganization involved in cell cycle(GO:0030037)
0.1 0.2 GO:1904247 positive regulation of polynucleotide adenylyltransferase activity(GO:1904247)
0.1 0.2 GO:0051097 negative regulation of helicase activity(GO:0051097)
0.1 0.2 GO:0038165 oncostatin-M-mediated signaling pathway(GO:0038165)
0.1 1.6 GO:0010669 epithelial structure maintenance(GO:0010669)
0.0 0.4 GO:0010991 negative regulation of SMAD protein complex assembly(GO:0010991)
0.0 1.0 GO:0050860 negative regulation of T cell receptor signaling pathway(GO:0050860)
0.0 0.1 GO:0018076 N-terminal peptidyl-lysine acetylation(GO:0018076)
0.0 0.3 GO:0070544 histone H3-K36 demethylation(GO:0070544)
0.0 0.4 GO:0034356 NAD biosynthesis via nicotinamide riboside salvage pathway(GO:0034356)
0.0 0.1 GO:0090402 oncogene-induced cell senescence(GO:0090402)
0.0 0.6 GO:0007220 Notch receptor processing(GO:0007220)
0.0 0.1 GO:0090625 mRNA cleavage involved in gene silencing by miRNA(GO:0035279) mRNA cleavage involved in gene silencing by siRNA(GO:0090625) mRNA cleavage involved in gene silencing(GO:0098795)
0.0 0.3 GO:2001224 positive regulation of neuron migration(GO:2001224)
0.0 0.2 GO:0009082 branched-chain amino acid biosynthetic process(GO:0009082) leucine biosynthetic process(GO:0009098) valine biosynthetic process(GO:0009099)
0.0 0.1 GO:0005997 xylulose metabolic process(GO:0005997)
0.0 1.2 GO:0050775 positive regulation of dendrite morphogenesis(GO:0050775)
0.0 0.2 GO:0001955 blood vessel maturation(GO:0001955)
0.0 0.2 GO:0032020 ISG15-protein conjugation(GO:0032020)
0.0 0.4 GO:0051683 establishment of Golgi localization(GO:0051683)
0.0 0.2 GO:0070257 positive regulation of mucus secretion(GO:0070257)
0.0 0.2 GO:0045078 positive regulation of interferon-gamma biosynthetic process(GO:0045078)
0.0 0.3 GO:0010739 positive regulation of protein kinase A signaling(GO:0010739)
0.0 0.1 GO:0034983 peptidyl-lysine deacetylation(GO:0034983)
0.0 1.0 GO:0006977 DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest(GO:0006977)