ISMARA results: UAAGACG

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ENCODE cell lines, expression (Ernst 2011)

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Results for UAAGACG

Z-value: 0.26

Motif logo

miRNA associated with seed UAAGACG

Name	miRBASE accession
hsa-miR-208a-3p miRBase	MIMAT0000241
hsa-miR-208b-3p miRBase	MIMAT0004960

Activity profile of UAAGACG motif

Sorted Z-values of UAAGACG motif

Network of associatons between targets according to the STRING database.

First level regulatory network of UAAGACG

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Promoter	Score	Transcript	Gene	Gene Info
chr8_+_38614807	0.40	ENST00000330691.6 ENST00000348567.4	TACC1	transforming, acidic coiled-coil containing protein 1
chr10_+_11206925	0.29	ENST00000354440.2 ENST00000315874.4 ENST00000427450.1	CELF2	CUGBP, Elav-like family member 2
chr7_-_120498357	0.22	ENST00000415871.1 ENST00000222747.3 ENST00000430985.1	TSPAN12	tetraspanin 12
chr19_-_7293942	0.22	ENST00000341500.5 ENST00000302850.5	INSR	insulin receptor
chr1_-_154842741	0.19	ENST00000271915.4	KCNN3	potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3
chr10_+_112631547	0.18	ENST00000280154.7 ENST00000393104.2	PDCD4	programmed cell death 4 (neoplastic transformation inhibitor)
chr8_+_56014949	0.16	ENST00000327381.6	XKR4	XK, Kell blood group complex subunit-related family, member 4
chr12_-_92539614	0.13	ENST00000256015.3	BTG1	B-cell translocation gene 1, anti-proliferative
chr3_-_15374033	0.13	ENST00000253688.5 ENST00000383791.3	SH3BP5	SH3-domain binding protein 5 (BTK-associated)
chr16_-_46655538	0.13	ENST00000303383.3	SHCBP1	SHC SH2-domain binding protein 1

Showing 1 to 10 of 96 entries

Gene Ontology Analysis

Gene overrepresentation in C2:CP:REACTOME category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.2	REACTOME SIGNAL ATTENUATION	Genes involved in Signal attenuation

Showing 1 to 1 of 1 entries

Gene overrepresentation in cellular_component category:

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Total log-likelihood	Term	Description
0.2	GO:0005899	insulin receptor complex(GO:0005899)
0.1	GO:0000308	cytoplasmic cyclin-dependent protein kinase holoenzyme complex(GO:0000308)
0.1	GO:1990316	ATG1/ULK1 kinase complex(GO:1990316)
0.0	GO:0070557	PCNA-p21 complex(GO:0070557)
0.0	GO:0070695	FHF complex(GO:0070695)

Showing 1 to 5 of 5 entries

Gene overrepresentation in molecular_function category:

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Total log-likelihood	Term	Description
0.3	GO:0042813	Wnt-activated receptor activity(GO:0042813)
0.2	GO:0016286	small conductance calcium-activated potassium channel activity(GO:0016286)
0.2	GO:0043559	insulin binding(GO:0043559)
0.1	GO:1990460	leptin receptor binding(GO:1990460)
0.1	GO:0035368	selenocysteine insertion sequence binding(GO:0035368)
0.0	GO:0019912	cyclin-dependent protein kinase activating kinase activity(GO:0019912)

Showing 1 to 6 of 6 entries

Gene overrepresentation in biological_process category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.2	GO:0060940	epithelial to mesenchymal transition involved in cardiac fibroblast development(GO:0060940) negative regulation of vascular smooth muscle cell differentiation(GO:1905064)
0.1	0.2	GO:1990535	transformation of host cell by virus(GO:0019087) neuron projection maintenance(GO:1990535)
0.0	0.1	GO:0035910	ascending aorta development(GO:0035905) ascending aorta morphogenesis(GO:0035910)
0.0	0.1	GO:2000271	positive regulation of fibroblast apoptotic process(GO:2000271)
0.0	0.1	GO:0051534	negative regulation of NFAT protein import into nucleus(GO:0051534)
0.0	0.0	GO:0060535	trachea cartilage morphogenesis(GO:0060535)
0.0	0.0	GO:0060574	intestinal epithelial cell maturation(GO:0060574)
0.0	0.0	GO:0022027	interkinetic nuclear migration(GO:0022027)

Showing 1 to 8 of 8 entries

Results for UAAGACG

Z-value: 0.26

Motif logo

miRNA associated with seed UAAGACG

Activity profile of UAAGACG motif

Sorted Z-values of UAAGACG motif

Network of associatons between targets according to the STRING database.

First level regulatory network of UAAGACG

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Top targets:

Gene Ontology Analysis

Gene overrepresentation in C2:CP:REACTOME category:

Gene overrepresentation in cellular_component category:

Gene overrepresentation in molecular_function category:

Gene overrepresentation in biological_process category: