hg18_v1_chr1_-_108032645_108032650	5.89162	MSX1,2.p2	AF035442|VAV3|10451|vav 3 guanine nucleotide exchange factor	AK300474|VAV3|10451|vav 3 guanine nucleotide exchange factor	AK304088|VAV3|10451|vav 3 guanine nucleotide exchange factor	AK316295|VAV3|10451|vav 3 guanine nucleotide exchange factor	NM_001079874|VAV3|10451|vav 3 guanine nucleotide exchange factor
hg18_v1_chr14_-_64479198_64479339	4.11092	MSX1,2.p2	BC022820|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)	AK225871|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)	BC005277|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)	BC067221|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)	BC016756|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)	X68314|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)	X53463|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)	BC039850|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)	BC046164|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)	NM_002083|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)
hg18_v1_chr11_+_7574992_7574997	3.59432	MSX1,2.p2	AK296718|PPFIBP2|8495|PTPRF interacting protein, binding protein 2 (liprin beta 2)
hg18_v1_chr6_-_52060327_52060381	3.46302	MSX1,2.p2	AF480064|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)	AY092083|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)	AY074797|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)	NM_138694|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)	NM_170724|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)
hg18_v1_chr3_-_139315011_139315011	3.20367	MSX1,2.p2	AK057406|DZIP1L|199221|DAZ interacting protein 1-like	NM_001170538|DZIP1L|199221|DAZ interacting protein 1-like
hg18_v1_chr19_-_40696393_40696399	2.4861	MSX1,2.p2	BC035311|DMKN|93099|dermokine	AY358412|DMKN|93099|dermokine	NM_001126056|DMKN|93099|dermokine	NM_001126057|DMKN|93099|dermokine	NM_001126058|DMKN|93099|dermokine	NM_001190347|DMKN|93099|dermokine	NM_001190348|DMKN|93099|dermokine	NM_001190349|DMKN|93099|dermokine	NM_033317|DMKN|93099|dermokine
hg18_v1_chr5_-_148738980_148739050	2.19616	MSX1,2.p2	CR457192|IL17B|27190|interleukin 17B	BC113925|IL17B|27190|interleukin 17B	BC113946|IL17B|27190|interleukin 17B	AF152098|IL17B|27190|interleukin 17B	AF184969|IL17B|27190|interleukin 17B	AF218727|IL17B|27190|interleukin 17B	AY358931|IL17B|27190|interleukin 17B	AF110385|IL17B|27190|interleukin 17B	AF212311|IL17B|27190|interleukin 17B	NM_014443|IL17B|27190|interleukin 17B
hg18_v1_chr4_+_155703581_155703653	2.18138	MSX1,2.p2	AK312972|FGB|2244|fibrinogen beta chain	NM_001184741|FGB|2244|fibrinogen beta chain	NM_005141|FGB|2244|fibrinogen beta chain	AK303788|FGB|2244|fibrinogen beta chain	AK311683|FGB|2244|fibrinogen beta chain	BC106760|FGB|2244|fibrinogen beta chain	BC036007|FGB|2244|fibrinogen beta chain	BC007030|FGB|2244|fibrinogen beta chain	BC107766|FGB|2244|fibrinogen beta chain	BC060040|FGB|2244|fibrinogen beta chain	AK309592|FGB|2244|fibrinogen beta chain	BC070245|FGB|2244|fibrinogen beta chain	CR616572|FGB|2244|fibrinogen beta chain	CR617919|FGB|2244|fibrinogen beta chain	CR622186|FGB|2244|fibrinogen beta chain	CR617174|FGB|2244|fibrinogen beta chain	CR593920|FGB|2244|fibrinogen beta chain	CR594460|FGB|2244|fibrinogen beta chain	CR601700|FGB|2244|fibrinogen beta chain	CR624480|FGB|2244|fibrinogen beta chain	CR604002|FGB|2244|fibrinogen beta chain	CR590454|FGB|2244|fibrinogen beta chain	CR592797|FGB|2244|fibrinogen beta chain	CR593608|FGB|2244|fibrinogen beta chain	CR593807|FGB|2244|fibrinogen beta chain	CR594718|FGB|2244|fibrinogen beta chain	CR594769|FGB|2244|fibrinogen beta chain	CR595945|FGB|2244|fibrinogen beta chain	CR596719|FGB|2244|fibrinogen beta chain	CR597670|FGB|2244|fibrinogen beta chain	CR597709|FGB|2244|fibrinogen beta chain	CR597722|FGB|2244|fibrinogen beta chain	CR598606|FGB|2244|fibrinogen beta chain	CR600529|FGB|2244|fibrinogen beta chain	CR600866|FGB|2244|fibrinogen beta chain	CR601684|FGB|2244|fibrinogen beta chain	CR602453|FGB|2244|fibrinogen beta chain	CR603045|FGB|2244|fibrinogen beta chain	CR604009|FGB|2244|fibrinogen beta chain	CR605515|FGB|2244|fibrinogen beta chain	CR605964|FGB|2244|fibrinogen beta chain	CR607409|FGB|2244|fibrinogen beta chain	CR611317|FGB|2244|fibrinogen beta chain	CR611717|FGB|2244|fibrinogen beta chain	CR613391|FGB|2244|fibrinogen beta chain	CR614263|FGB|2244|fibrinogen beta chain	CR614265|FGB|2244|fibrinogen beta chain	CR615982|FGB|2244|fibrinogen beta chain	CR616718|FGB|2244|fibrinogen beta chain	CR617356|FGB|2244|fibrinogen beta chain	CR618890|FGB|2244|fibrinogen beta chain	CR620361|FGB|2244|fibrinogen beta chain	CR621559|FGB|2244|fibrinogen beta chain	CR621561|FGB|2244|fibrinogen beta chain	CR621650|FGB|2244|fibrinogen beta chain	CR623707|FGB|2244|fibrinogen beta chain	CR625535|FGB|2244|fibrinogen beta chain	CR626051|FGB|2244|fibrinogen beta chain	CR626504|FGB|2244|fibrinogen beta chain	CR595479|FGB|2244|fibrinogen beta chain	CR596051|FGB|2244|fibrinogen beta chain	CR609143|FGB|2244|fibrinogen beta chain	CR609458|FGB|2244|fibrinogen beta chain	CR620628|FGB|2244|fibrinogen beta chain	CR621038|FGB|2244|fibrinogen beta chain	CR623054|FGB|2244|fibrinogen beta chain	CR624989|FGB|2244|fibrinogen beta chain	CR625311|FGB|2244|fibrinogen beta chain	CR626133|FGB|2244|fibrinogen beta chain	CR592803|FGB|2244|fibrinogen beta chain	CR594764|FGB|2244|fibrinogen beta chain	CR594766|FGB|2244|fibrinogen beta chain	CR595550|FGB|2244|fibrinogen beta chain	CR613846|FGB|2244|fibrinogen beta chain	CR614201|FGB|2244|fibrinogen beta chain	CR617322|FGB|2244|fibrinogen beta chain	CR622369|FGB|2244|fibrinogen beta chain	CR623131|FGB|2244|fibrinogen beta chain	CR594367|FGB|2244|fibrinogen beta chain	CR597783|FGB|2244|fibrinogen beta chain	CR602828|FGB|2244|fibrinogen beta chain	CR622383|FGB|2244|fibrinogen beta chain	CR613960|FGB|2244|fibrinogen beta chain	CR594221|FGB|2244|fibrinogen beta chain	CR601953|FGB|2244|fibrinogen beta chain	CR604313|FGB|2244|fibrinogen beta chain	CR605676|FGB|2244|fibrinogen beta chain	CR606437|FGB|2244|fibrinogen beta chain	CR609453|FGB|2244|fibrinogen beta chain	CR618377|FGB|2244|fibrinogen beta chain	CR622096|FGB|2244|fibrinogen beta chain	CR623793|FGB|2244|fibrinogen beta chain	CR606336|FGB|2244|fibrinogen beta chain	CR597369|FGB|2244|fibrinogen beta chain	CR602793|FGB|2244|fibrinogen beta chain	CR614094|FGB|2244|fibrinogen beta chain	CR614404|FGB|2244|fibrinogen beta chain	CR621583|FGB|2244|fibrinogen beta chain	CR625744|FGB|2244|fibrinogen beta chain	CR595998|FGB|2244|fibrinogen beta chain	CR597353|FGB|2244|fibrinogen beta chain	CR605124|FGB|2244|fibrinogen beta chain	CR608241|FGB|2244|fibrinogen beta chain	J00129|FGB|2244|fibrinogen beta chain	CR621672|FGB|2244|fibrinogen beta chain	CR597172|FGB|2244|fibrinogen beta chain	CR618810|FGB|2244|fibrinogen beta chain	CR619840|FGB|2244|fibrinogen beta chain	CR600168|FGB|2244|fibrinogen beta chain	CR611382|FGB|2244|fibrinogen beta chain	CR624332|FGB|2244|fibrinogen beta chain	CR626502|FGB|2244|fibrinogen beta chain
hg18_v1_chrX_+_128966844_128966931	2.17931	MSX1,2.p2	NM_021946|BCORL1|63035|BCL6 corepressor-like 1	AK074089|BCORL1|63035|BCL6 corepressor-like 1
hg18_v1_chr2_+_113542017_113542029	2.17898	MSX1,2.p2	AY029413|IL1F10|84639|interleukin 1 family, member 10 (theta)	NM_173161|IL1F10|84639|interleukin 1 family, member 10 (theta)	BC103966|IL1F10|84639|interleukin 1 family, member 10 (theta)	BC103967|IL1F10|84639|interleukin 1 family, member 10 (theta)	BC103968|IL1F10|84639|interleukin 1 family, member 10 (theta)	AY358846|IL1F10|84639|interleukin 1 family, member 10 (theta)
hg18_v1_chr11_+_101693403_101693435	2.12645	MSX1,2.p2	NM_001165|BIRC3|330|baculoviral IAP repeat containing 3	NM_182962|BIRC3|330|baculoviral IAP repeat containing 3	AF070674|BIRC3|330|baculoviral IAP repeat containing 3
hg18_v1_chr17_-_25685175_25685202	2.07813	MSX1,2.p2	AK290266|TMIGD1|388364|transmembrane and immunoglobulin domain containing 1	BC137201|TMIGD1|388364|transmembrane and immunoglobulin domain containing 1	BC137202|TMIGD1|388364|transmembrane and immunoglobulin domain containing 1	AY358153|TMIGD1|388364|transmembrane and immunoglobulin domain containing 1	NM_206832|TMIGD1|388364|transmembrane and immunoglobulin domain containing 1	AK172838|TMIGD1|388364|transmembrane and immunoglobulin domain containing 1
hg18_v1_chrX_-_15530112_15530198	2.04265	MSX1,2.p2	AK315144|ACE2|59272|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2	NM_021804|ACE2|59272|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2	AB193259|ACE2|59272|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2
hg18_v1_chr17_-_19592178_19592337	1.94952	MSX1,2.p2	BC021194|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1	BC008892|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1	BC004370|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1	AK314584|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1	AK225513|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1	M74542|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1	AK093877|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1	AK225505|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1	BC004102|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1	NM_000691|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1
hg18_v1_chr21_-_36774257_36774257	1.92917	MSX1,2.p2	AF314090|CLDN14|23562|claudin 14	AY355348|CLDN14|23562|claudin 14	NM_001146079|CLDN14|23562|claudin 14	NM_144492|CLDN14|23562|claudin 14
hg18_v1_chr1_-_150328153_150328163	1.91961	MSX1,2.p2	BC137493|TCHHL1|126637|trichohyalin-like 1	AY456639|TCHHL1|126637|trichohyalin-like 1	NM_001008536|TCHHL1|126637|trichohyalin-like 1
hg18_v1_chr3_+_25445071_25445226	1.88323	MSX1,2.p2	BC060794|RARB|5915|retinoic acid receptor, beta	AK292032|RARB|5915|retinoic acid receptor, beta	AB307688|RARB|5915|retinoic acid receptor, beta
hg18_v1_chr6_-_48186868_48186901	1.86528	MSX1,2.p2	AK300335|C6orf138|442213|chromosome 6 open reading frame 138
hg18_v1_chr4_+_71096830_71096832	1.84568	MSX1,2.p2	EF113908|ODAM|54959|odontogenic, ameloblast asssociated	NM_017855|ODAM|54959|odontogenic, ameloblast asssociated
hg18_v1_chr2_-_180135559_180135559	1.81049	MSX1,2.p2	AK057999|ZNF385B|151126|zinc finger protein 385B	NM_001113398|ZNF385B|151126|zinc finger protein 385B
hg18_v1_chr11_-_85074848_85074967	1.66809	MSX1,2.p2	CR595564|CCDC89|220388|coiled-coil domain containing 89	BC044814|CCDC89|220388|coiled-coil domain containing 89	AK095478|CCDC89|220388|coiled-coil domain containing 89	NM_152723|CCDC89|220388|coiled-coil domain containing 89
hg18_v1_chr17_-_36113502_36113527	1.60325	MSX1,2.p2	BC111964|KRT24|192666|keratin 24	BC111968|KRT24|192666|keratin 24	CR607026|KRT24|192666|keratin 24	AK000268|KRT24|192666|keratin 24	NM_019016|KRT24|192666|keratin 24
hg18_v1_chr5_+_59819761_59819834	1.59641	MSX1,2.p2	AL050198|PART1|25859|prostate androgen-regulated transcript 1 (non-protein coding)	AK094518|PART1|25859|prostate androgen-regulated transcript 1 (non-protein coding)
hg18_v1_chr6_-_39801088_39801158	1.55499	MSX1,2.p2	BC117307|KIF6|221458|kinesin family member 6	BC143444|KIF6|221458|kinesin family member 6	BC143445|KIF6|221458|kinesin family member 6	AK131471|KIF6|221458|kinesin family member 6	NM_145027|KIF6|221458|kinesin family member 6
hg18_v1_chr1_+_31654998_31654998	1.52451	MSX1,2.p2	AK127659|SERINC2|347735|serine incorporator 2	NM_001199038|SERINC2|347735|serine incorporator 2
hg18_v1_chr3_-_101316038_101316046	1.51645	MSX1,2.p2	BC017987|FILIP1L|11259|filamin A interacting protein 1-like	NM_001042459|FILIP1L|11259|filamin A interacting protein 1-like	NM_182909|FILIP1L|11259|filamin A interacting protein 1-like	AF329092|FILIP1L|11259|filamin A interacting protein 1-like
hg18_v1_chr14_-_93324518_93324518	1.51142	MSX1,2.p2	AY225516|PRIMA1|145270|proline rich membrane anchor 1	AY225517|PRIMA1|145270|proline rich membrane anchor 1	NM_178013|PRIMA1|145270|proline rich membrane anchor 1
hg18_v1_chr4_+_89115862_89115890	1.44963	MSX1,2.p2	CR621274|SPP1|6696|secreted phosphoprotein 1	BX648003|SPP1|6696|secreted phosphoprotein 1	J04765|SPP1|6696|secreted phosphoprotein 1	AK057738|SPP1|6696|secreted phosphoprotein 1	AK075463|SPP1|6696|secreted phosphoprotein 1	AK290090|SPP1|6696|secreted phosphoprotein 1	AK296035|SPP1|6696|secreted phosphoprotein 1	BC007016|SPP1|6696|secreted phosphoprotein 1	BC017387|SPP1|6696|secreted phosphoprotein 1	BC022844|SPP1|6696|secreted phosphoprotein 1	AK295491|SPP1|6696|secreted phosphoprotein 1
hg18_v1_chr1_+_31655607_31655634	1.40711	MSX1,2.p2	NM_001199037|SERINC2|347735|serine incorporator 2	AK298512|SERINC2|347735|serine incorporator 2
hg18_v1_chr16_-_29817841_29818110	1.3793	MSX1,2.p2	EU176661|SEZ6L2|26470|seizure related 6 homolog (mouse)-like 2	BC000567|SEZ6L2|26470|seizure related 6 homolog (mouse)-like 2	AJ245820|SEZ6L2|26470|seizure related 6 homolog (mouse)-like 2	AJ245821|SEZ6L2|26470|seizure related 6 homolog (mouse)-like 2	AJ245822|SEZ6L2|26470|seizure related 6 homolog (mouse)-like 2	AK293675|SEZ6L2|26470|seizure related 6 homolog (mouse)-like 2	AY358404|SEZ6L2|26470|seizure related 6 homolog (mouse)-like 2	NM_001114099|SEZ6L2|26470|seizure related 6 homolog (mouse)-like 2	NM_001114100|SEZ6L2|26470|seizure related 6 homolog (mouse)-like 2	NM_012410|SEZ6L2|26470|seizure related 6 homolog (mouse)-like 2	NM_201575|SEZ6L2|26470|seizure related 6 homolog (mouse)-like 2	AK299103|SEZ6L2|26470|seizure related 6 homolog (mouse)-like 2
hg18_v1_chr4_-_159311959_159311984	1.37692	MSX1,2.p2	AL834177|FAM198B|51313|family with sequence similarity 198, member B	AM392540|FAM198B|51313|family with sequence similarity 198, member B	AM392704|FAM198B|51313|family with sequence similarity 198, member B
hg18_v1_chr3_+_25444753_25444805	1.33756	MSX1,2.p2	AF157483|RARB|5915|retinoic acid receptor, beta	NM_016152|RARB|5915|retinoic acid receptor, beta	CR621137|RARB|5915|retinoic acid receptor, beta
hg18_v1_chr7_-_96471544_96471550	1.3328	MSX1,2.p2	AK091367|DLX6-AS1|285987|DLX6 antisense RNA 1 (non-protein coding)	BC101445|DLX6-AS1|285987|DLX6 antisense RNA 1 (non-protein coding)	BC101446|DLX6-AS1|285987|DLX6 antisense RNA 1 (non-protein coding)	BC101447|DLX6-AS1|285987|DLX6 antisense RNA 1 (non-protein coding)	BC101985|DLX6-AS1|285987|DLX6 antisense RNA 1 (non-protein coding)	BC113049|DLX6-AS1|285987|DLX6 antisense RNA 1 (non-protein coding)
hg18_v1_chr12_+_32546243_32546370	1.29695	MSX1,2.p2	BC039708|FGD4|121512|FYVE, RhoGEF and PH domain containing 4	BC063403|FGD4|121512|FYVE, RhoGEF and PH domain containing 4	NM_139241|FGD4|121512|FYVE, RhoGEF and PH domain containing 4	BC096746|FGD4|121512|FYVE, RhoGEF and PH domain containing 4	AK057294|FGD4|121512|FYVE, RhoGEF and PH domain containing 4	BC045552|FGD4|121512|FYVE, RhoGEF and PH domain containing 4
hg18_v1_chr3_-_150422474_150422521	1.29143	MSX1,2.p2	BC070304|CP|1356|ceruloplasmin (ferroxidase)	NM_000096|CP|1356|ceruloplasmin (ferroxidase)
hg18_v1_chr4_+_89115825_89115843	1.28184	MSX1,2.p2	NM_000582|SPP1|6696|secreted phosphoprotein 1	NM_001040058|SPP1|6696|secreted phosphoprotein 1	NM_001040060|SPP1|6696|secreted phosphoprotein 1	BC093033|SPP1|6696|secreted phosphoprotein 1	CR602900|SPP1|6696|secreted phosphoprotein 1
hg18_v1_chr17_+_72380323_72380387	1.27343	MSX1,2.p2	AB114297|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B	NM_198955|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B	BC144361|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B
hg18_v1_chr12_-_6354818_6354975	1.22942	MSX1,2.p2	AY365119|SCNN1A|6337|sodium channel, nonvoltage-gated 1 alpha	X76180|SCNN1A|6337|sodium channel, nonvoltage-gated 1 alpha
hg18_v1_chr12_-_50871953_50872069	1.20629	MSX1,2.p2	AJ717743|KRT80|144501|keratin 80	BC033114|KRT80|144501|keratin 80	BC065180|KRT80|144501|keratin 80	NM_001081492|KRT80|144501|keratin 80	NM_182507|KRT80|144501|keratin 80
hg18_v1_chr2_+_84597087_84597089	1.19984	MSX1,2.p2	AK094676|DNAH6|1768|dynein, axonemal, heavy chain 6	NM_001370|DNAH6|1768|dynein, axonemal, heavy chain 6
hg18_v1_chr1_+_151456683_151456683	1.1959	MSX1,2.p2	NM_001195571|PRR9|574414|proline rich 9
hg18_v1_chr14_-_49543987_49543987	1.1907	MSX1,2.p2	AK091232|C14orf182|283551|chromosome 14 open reading frame 182	NM_001012706|C14orf182|283551|chromosome 14 open reading frame 182
hg18_v1_chr4_+_89115892_89115920	1.16923	MSX1,2.p2	AK290104|SPP1|6696|secreted phosphoprotein 1	M83248|SPP1|6696|secreted phosphoprotein 1	AK315461|SPP1|6696|secreted phosphoprotein 1	CR594911|SPP1|6696|secreted phosphoprotein 1	CR614125|SPP1|6696|secreted phosphoprotein 1	CR615073|SPP1|6696|secreted phosphoprotein 1	CR624176|SPP1|6696|secreted phosphoprotein 1	CR590765|SPP1|6696|secreted phosphoprotein 1	CR592228|SPP1|6696|secreted phosphoprotein 1	CR592500|SPP1|6696|secreted phosphoprotein 1	CR593010|SPP1|6696|secreted phosphoprotein 1	CR594618|SPP1|6696|secreted phosphoprotein 1	CR594667|SPP1|6696|secreted phosphoprotein 1	CR595305|SPP1|6696|secreted phosphoprotein 1	CR597759|SPP1|6696|secreted phosphoprotein 1	CR599125|SPP1|6696|secreted phosphoprotein 1	CR600744|SPP1|6696|secreted phosphoprotein 1	CR603247|SPP1|6696|secreted phosphoprotein 1	CR610220|SPP1|6696|secreted phosphoprotein 1	CR610546|SPP1|6696|secreted phosphoprotein 1	CR610609|SPP1|6696|secreted phosphoprotein 1	CR612096|SPP1|6696|secreted phosphoprotein 1	CR616812|SPP1|6696|secreted phosphoprotein 1	CR618220|SPP1|6696|secreted phosphoprotein 1	CR618369|SPP1|6696|secreted phosphoprotein 1	CR619881|SPP1|6696|secreted phosphoprotein 1	CR620974|SPP1|6696|secreted phosphoprotein 1	CR621360|SPP1|6696|secreted phosphoprotein 1	CR621428|SPP1|6696|secreted phosphoprotein 1	CR622075|SPP1|6696|secreted phosphoprotein 1	CR624537|SPP1|6696|secreted phosphoprotein 1	CR624945|SPP1|6696|secreted phosphoprotein 1	CR625643|SPP1|6696|secreted phosphoprotein 1	CR626718|SPP1|6696|secreted phosphoprotein 1	CR624416|SPP1|6696|secreted phosphoprotein 1	CR610252|SPP1|6696|secreted phosphoprotein 1	CR625710|SPP1|6696|secreted phosphoprotein 1	AF052124|SPP1|6696|secreted phosphoprotein 1	CR591902|SPP1|6696|secreted phosphoprotein 1	CR594254|SPP1|6696|secreted phosphoprotein 1	CR594979|SPP1|6696|secreted phosphoprotein 1	CR600714|SPP1|6696|secreted phosphoprotein 1	CR601143|SPP1|6696|secreted phosphoprotein 1	CR602328|SPP1|6696|secreted phosphoprotein 1	CR603218|SPP1|6696|secreted phosphoprotein 1	CR606646|SPP1|6696|secreted phosphoprotein 1	CR610677|SPP1|6696|secreted phosphoprotein 1	CR613156|SPP1|6696|secreted phosphoprotein 1	CR614191|SPP1|6696|secreted phosphoprotein 1	CR615383|SPP1|6696|secreted phosphoprotein 1	CR624157|SPP1|6696|secreted phosphoprotein 1	CR591781|SPP1|6696|secreted phosphoprotein 1	CR605902|SPP1|6696|secreted phosphoprotein 1	CR614122|SPP1|6696|secreted phosphoprotein 1	CR593792|SPP1|6696|secreted phosphoprotein 1	CR596475|SPP1|6696|secreted phosphoprotein 1	CR601537|SPP1|6696|secreted phosphoprotein 1	CR608403|SPP1|6696|secreted phosphoprotein 1	CR613454|SPP1|6696|secreted phosphoprotein 1	CR617515|SPP1|6696|secreted phosphoprotein 1	CR618080|SPP1|6696|secreted phosphoprotein 1	CR619414|SPP1|6696|secreted phosphoprotein 1	CR591447|SPP1|6696|secreted phosphoprotein 1	CR593987|SPP1|6696|secreted phosphoprotein 1	CR596445|SPP1|6696|secreted phosphoprotein 1	CR600682|SPP1|6696|secreted phosphoprotein 1	CR608709|SPP1|6696|secreted phosphoprotein 1	CR609665|SPP1|6696|secreted phosphoprotein 1	CR613613|SPP1|6696|secreted phosphoprotein 1	CR624029|SPP1|6696|secreted phosphoprotein 1	CR625747|SPP1|6696|secreted phosphoprotein 1	CR626471|SPP1|6696|secreted phosphoprotein 1	CR616615|SPP1|6696|secreted phosphoprotein 1	CR607920|SPP1|6696|secreted phosphoprotein 1	CR611180|SPP1|6696|secreted phosphoprotein 1	CR618956|SPP1|6696|secreted phosphoprotein 1	CR623036|SPP1|6696|secreted phosphoprotein 1	CR613121|SPP1|6696|secreted phosphoprotein 1	CR591466|SPP1|6696|secreted phosphoprotein 1	CR600336|SPP1|6696|secreted phosphoprotein 1
hg18_v1_chr2_-_192420168_192420265	1.15933	MSX1,2.p2	AK290378|SDPR|8436|serum deprivation response	NM_004657|SDPR|8436|serum deprivation response
hg18_v1_chr10_-_74384485_74384549	1.11684	MSX1,2.p2	AF349540|PLA2G12B|84647|phospholipase A2, group XIIB	BC093996|PLA2G12B|84647|phospholipase A2, group XIIB	BC111946|PLA2G12B|84647|phospholipase A2, group XIIB	BC143532|PLA2G12B|84647|phospholipase A2, group XIIB	AY358032|PLA2G12B|84647|phospholipase A2, group XIIB	NM_032562|PLA2G12B|84647|phospholipase A2, group XIIB	AF339053|PLA2G12B|84647|phospholipase A2, group XIIB	AK313712|PLA2G12B|84647|phospholipase A2, group XIIB
hg18_v1_chr8_-_110689396_110689408	1.08292	MSX1,2.p2	AK297182|SYBU|55638|syntabulin (syntaxin-interacting)
hg18_v1_chr20_-_48686832_48686832	1.05818	MSX1,2.p2	AK056792|FAM65C|140876|family with sequence similarity 65, member C	NM_080829|FAM65C|140876|family with sequence similarity 65, member C
hg18_v1_chr2_-_165133239_165133262	1.0377	MSX1,2.p2	AK309590|GRB14|2888|growth factor receptor-bound protein 14	AK301961|GRB14|2888|growth factor receptor-bound protein 14	AK302129|GRB14|2888|growth factor receptor-bound protein 14
hg18_v1_chr10_+_124310170_124310262	1.03718	MSX1,2.p2	AF159456|DMBT1|1755|deleted in malignant brain tumors 1	AJ000342|DMBT1|1755|deleted in malignant brain tumors 1	AJ243212|DMBT1|1755|deleted in malignant brain tumors 1	AJ243224|DMBT1|1755|deleted in malignant brain tumors 1	NM_004406|DMBT1|1755|deleted in malignant brain tumors 1	NM_007329|DMBT1|1755|deleted in malignant brain tumors 1	NM_017579|DMBT1|1755|deleted in malignant brain tumors 1	BC153299|DMBT1|1755|deleted in malignant brain tumors 1	AJ297935|DMBT1|1755|deleted in malignant brain tumors 1	AK304149|DMBT1|1755|deleted in malignant brain tumors 1	AK304128|DMBT1|1755|deleted in malignant brain tumors 1
hg18_v1_chr14_+_20595820_20595891	1.03647	MSX1,2.p2	BC137537|RNASE8|122665|ribonuclease, RNase A family, 8	BC137538|RNASE8|122665|ribonuclease, RNase A family, 8	NM_138331|RNASE8|122665|ribonuclease, RNase A family, 8
hg18_v1_chr3_+_187866464_187866493	1.02591	MSX1,2.p2	AK313381|HRG|3273|histidine-rich glycoprotein	BC069574|HRG|3273|histidine-rich glycoprotein	NM_000412|HRG|3273|histidine-rich glycoprotein	BC150591|HRG|3273|histidine-rich glycoprotein
hg18_v1_chr8_-_15140162_15140162	1.02108	MSX1,2.p2	NM_139167|SGCZ|137868|sarcoglycan, zeta
hg18_v1_chr4_+_77575276_77575276	1.01932	MSX1,2.p2	AB055660|SHROOM3|57619|shroom family member 3	NM_020859|SHROOM3|57619|shroom family member 3
hg18_v1_chr20_+_31613800_31613877	1.00512	MSX1,2.p2	BC015066|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2	NM_001039709|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2	NM_005093|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2	AF069747|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2	AF052212|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2
hg18_v1_chr13_+_51496679_51496827	0.983142	MSX1,2.p2	BC073862|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	D87455|UTP14C|9724|UTP14, U3 small nucleolar ribonucleoprotein, homolog C (yeast)	NM_021645|UTP14C|9724|UTP14, U3 small nucleolar ribonucleoprotein, homolog C (yeast)
hg18_v1_chr2_-_104834344_104834352	0.97276	MSX1,2.p2	AK096498|LOC100506421|100506421|hypothetical LOC100506421
hg18_v1_chr5_-_90645974_90646029	0.969889	MSX1,2.p2	AK091866|LOC100505994|100505994|hypothetical LOC100505994
hg18_v1_chr2_-_134042500_134042517	0.961794	MSX1,2.p2	AK057980|NCKAP5|344148|NCK-associated protein 5	NM_207363|NCKAP5|344148|NCK-associated protein 5	NM_207481|NCKAP5|344148|NCK-associated protein 5
hg18_v1_chr12_+_99712504_99712866	0.956587	MSX1,2.p2	NM_178826|ANO4|121601|anoctamin 4	AK091591|ANO4|121601|anoctamin 4	AK316105|ANO4|121601|anoctamin 4	AK293810|ANO4|121601|anoctamin 4
hg18_v1_chr10_-_62002672_62002721	0.952074	MSX1,2.p2	AB209308|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	AK126851|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)
hg18_v1_chr2_-_162808123_162808290	0.92516	MSX1,2.p2	BC026250|FAP|2191|fibroblast activation protein, alpha	AF007822|FAP|2191|fibroblast activation protein, alpha	U76833|FAP|2191|fibroblast activation protein, alpha	AK315448|FAP|2191|fibroblast activation protein, alpha	AK309260|FAP|2191|fibroblast activation protein, alpha	AK297118|FAP|2191|fibroblast activation protein, alpha	CR606795|FAP|2191|fibroblast activation protein, alpha	NM_004460|FAP|2191|fibroblast activation protein, alpha	U09278|FAP|2191|fibroblast activation protein, alpha
hg18_v1_chr7_+_111850367_111850490	0.922046	MSX1,2.p2	AK313211|IFRD1|3475|interferon-related developmental regulator 1	NM_001007245|IFRD1|3475|interferon-related developmental regulator 1	NM_001197080|IFRD1|3475|interferon-related developmental regulator 1	AK315967|IFRD1|3475|interferon-related developmental regulator 1	AK308066|IFRD1|3475|interferon-related developmental regulator 1
hg18_v1_chr5_+_34723420_34723420	0.916752	MSX1,2.p2	AY354204|RAI14|26064|retinoic acid induced 14	NM_001145523|RAI14|26064|retinoic acid induced 14
hg18_v1_chr3_+_25444837_25444905	0.915322	MSX1,2.p2	BC030234|RARB|5915|retinoic acid receptor, beta	NM_000965|RARB|5915|retinoic acid receptor, beta	X07282|RARB|5915|retinoic acid receptor, beta	Y00291|RARB|5915|retinoic acid receptor, beta
hg18_v1_chr3_-_150578207_150578257	0.903412	MSX1,2.p2	BC034145|TM4SF1|4071|transmembrane 4 L six family member 1	AK130271|TM4SF1|4071|transmembrane 4 L six family member 1	NM_014220|TM4SF1|4071|transmembrane 4 L six family member 1
hg18_v1_chr7_-_13992351_13992663	0.888458	MSX1,2.p2	AK293802|ETV1|2115|ets variant 1	AK311134|ETV1|2115|ets variant 1	AK311194|ETV1|2115|ets variant 1	CR627389|ETV1|2115|ets variant 1	AK294572|ETV1|2115|ets variant 1	AK311707|ETV1|2115|ets variant 1	AK316007|ETV1|2115|ets variant 1	AK299693|ETV1|2115|ets variant 1	NM_001163150|ETV1|2115|ets variant 1	NM_001163151|ETV1|2115|ets variant 1	NM_001163152|ETV1|2115|ets variant 1
hg18_v1_chr17_+_65582981_65583070	0.885961	MSX1,2.p2	BC030961|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	AF153815|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	AF153816|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	NM_018658|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	NM_170741|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	AK225944|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	AK290799|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16
hg18_v1_chr12_+_7039453_7039465	0.885229	MSX1,2.p2	
hg18_v1_chr10_-_74384569_74384587	0.880798	MSX1,2.p2	AK311349|PLA2G12B|84647|phospholipase A2, group XIIB
hg18_v1_chr3_-_150578148_150578176	0.880538	MSX1,2.p2	AK130073|TM4SF1|4071|transmembrane 4 L six family member 1
hg18_v1_chr4_-_66218777_66218807	0.879834	MSX1,2.p2	AB209375|EPHA5|2044|EPH receptor A5
hg18_v1_chr11_+_130745580_130745778	0.862509	MSX1,2.p2	NM_001048209|NTM|50863|neurotrimin	AK315964|NTM|50863|neurotrimin	AK293487|NTM|50863|neurotrimin	AY358331|NTM|50863|neurotrimin
hg18_v1_chr9_-_115880372_115880408	0.850718	MSX1,2.p2	X04225|AMBP|259|alpha-1-microglobulin/bikunin precursor	AK290837|AMBP|259|alpha-1-microglobulin/bikunin precursor
hg18_v1_chr10_+_7785331_7785345	0.843536	MSX1,2.p2	AK225329|ITIH2|3698|inter-alpha (globulin) inhibitor H2	AK297334|ITIH2|3698|inter-alpha (globulin) inhibitor H2	X07173|ITIH2|3698|inter-alpha (globulin) inhibitor H2
hg18_v1_chr4_+_90252990_90252990	0.841528	MSX1,2.p2	AK027653|TIGD2|166815|tigger transposable element derived 2	NM_145715|TIGD2|166815|tigger transposable element derived 2
hg18_v1_chr2_-_192419896_192420071	0.826244	MSX1,2.p2	DQ891440|SDPR|8436|serum deprivation response	DQ894617|SDPR|8436|serum deprivation response	BC016475|SDPR|8436|serum deprivation response	AF085481|SDPR|8436|serum deprivation response	AK026943|SDPR|8436|serum deprivation response
hg18_v1_chrX_-_19598912_19599042	0.810133	MSX1,2.p2	AK293237|SH3KBP1|30011|SH3-domain kinase binding protein 1	NM_001184960|SH3KBP1|30011|SH3-domain kinase binding protein 1
hg18_v1_chr10_+_7785360_7785406	0.805923	MSX1,2.p2	AK225277|ITIH2|3698|inter-alpha (globulin) inhibitor H2
hg18_v1_chr6_-_56615544_56615652	0.802204	MSX1,2.p2	AF400226|DST|667|dystonin	AF400227|DST|667|dystonin	M69225|DST|667|dystonin	BC065536|DST|667|dystonin	L11690|DST|667|dystonin	NM_001723|DST|667|dystonin	NM_015548|DST|667|dystonin
hg18_v1_chr6_+_71192862_71192894	0.796756	MSX1,2.p2	NM_001162529|FAM135A|57579|family with sequence similarity 135, member A	AB037832|FAM135A|57579|family with sequence similarity 135, member A
hg18_v1_chr9_-_126309510_126309540	0.788339	MSX1,2.p2	BC032501|NR5A1|2516|nuclear receptor subfamily 5, group A, member 1	NM_004959|NR5A1|2516|nuclear receptor subfamily 5, group A, member 1
hg18_v1_chr9_+_18464138_18464228	0.777456	MSX1,2.p2	AK291956|ADAMTSL1|92949|ADAMTS-like 1	BC030262|ADAMTSL1|92949|ADAMTS-like 1	AF176313|ADAMTSL1|92949|ADAMTS-like 1
hg18_v1_chr20_+_71230_71275	0.771551	MSX1,2.p2	AK225987|DEFB126|81623|defensin, beta 126	AJ236910|DEFB126|81623|defensin, beta 126	BC069294|DEFB126|81623|defensin, beta 126	NM_030931|DEFB126|81623|defensin, beta 126	AF525928|DEFB126|81623|defensin, beta 126	AY122478|DEFB126|81623|defensin, beta 126
hg18_v1_chr4_+_89115923_89115952	0.771379	MSX1,2.p2	AY956318|SPP1|6696|secreted phosphoprotein 1	X13694|SPP1|6696|secreted phosphoprotein 1	CR617116|SPP1|6696|secreted phosphoprotein 1	CR615698|SPP1|6696|secreted phosphoprotein 1	CR612712|SPP1|6696|secreted phosphoprotein 1	CR604739|SPP1|6696|secreted phosphoprotein 1	CR610632|SPP1|6696|secreted phosphoprotein 1
hg18_v1_chrX_+_115481774_115481817	0.767191	MSX1,2.p2	AK313390|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14	NM_007231|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14	AK304243|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14	AF151978|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14
hg18_v1_chr12_+_70119785_70119849	0.767014	MSX1,2.p2	AK294985|LGR5|8549|leucine-rich repeat containing G protein-coupled receptor 5	AK315133|LGR5|8549|leucine-rich repeat containing G protein-coupled receptor 5
hg18_v1_chr11_-_128567302_128567302	0.760878	MSX1,2.p2	EF127492|ARHGAP32|9743|Rho GTPase activating protein 32	NM_001142685|ARHGAP32|9743|Rho GTPase activating protein 32
hg18_v1_chr9_-_115880425_115880491	0.759065	MSX1,2.p2	AK310791|AMBP|259|alpha-1-microglobulin/bikunin precursor	CR615737|AMBP|259|alpha-1-microglobulin/bikunin precursor
hg18_v1_chr4_-_70760381_70760458	0.752325	MSX1,2.p2	S77383|SULT1E1|6783|sulfotransferase family 1E, estrogen-preferring, member 1	Y11195|SULT1E1|6783|sulfotransferase family 1E, estrogen-preferring, member 1	AK310845|SULT1E1|6783|sulfotransferase family 1E, estrogen-preferring, member 1	U08098|SULT1E1|6783|sulfotransferase family 1E, estrogen-preferring, member 1	BC027956|SULT1E1|6783|sulfotransferase family 1E, estrogen-preferring, member 1	NM_005420|SULT1E1|6783|sulfotransferase family 1E, estrogen-preferring, member 1
hg18_v1_chr15_-_64644758_64644888	0.737803	MSX1,2.p2	AY358729|LCTL|197021|lactase-like	NM_207338|LCTL|197021|lactase-like
hg18_v1_chr7_+_80145461_80145547	0.736423	MSX1,2.p2	CR604329|CD36|948|CD36 molecule (thrombospondin receptor)
hg18_v1_chr4_+_74566325_74566343	0.720354	MSX1,2.p2	AK290556|AFM|173|afamin	NM_001133|AFM|173|afamin	BC109020|AFM|173|afamin	BC109021|AFM|173|afamin	L35486|AFM|173|afamin
hg18_v1_chr12_-_69837831_69837886	0.70432	MSX1,2.p2	AK223022|TSPAN8|7103|tetraspanin 8	AK313112|TSPAN8|7103|tetraspanin 8
hg18_v1_chr5_-_56814310_56814392	0.69841	MSX1,2.p2	BC137470|ACTBL2|345651|actin, beta-like 2	BC137473|ACTBL2|345651|actin, beta-like 2	BX648504|ACTBL2|345651|actin, beta-like 2	NM_001017992|ACTBL2|345651|actin, beta-like 2
hg18_v1_chr6_-_31215089_31215105	0.686223	MSX1,2.p2	AB031480|PSORS1C2|170680|psoriasis susceptibility 1 candidate 2	AF484420|PSORS1C2|170680|psoriasis susceptibility 1 candidate 2	NM_014069|PSORS1C2|170680|psoriasis susceptibility 1 candidate 2
hg18_v1_chr1_+_31823097_31823185	0.684952	MSX1,2.p2	AK027839|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1
hg18_v1_chr18_+_19826734_19826851	0.661092	MSX1,2.p2	AK091080|TTC39C|125488|tetratricopeptide repeat domain 39C	NM_153211|TTC39C|125488|tetratricopeptide repeat domain 39C	BC121034|TTC39C|125488|tetratricopeptide repeat domain 39C	BC121035|TTC39C|125488|tetratricopeptide repeat domain 39C
hg18_v1_chr3_-_167037946_167037977	0.654437	MSX1,2.p2	NM_000055|BCHE|590|butyrylcholinesterase
hg18_v1_chr12_-_6354650_6354676	0.651404	MSX1,2.p2	AK172792|SCNN1A|6337|sodium channel, nonvoltage-gated 1 alpha	NM_001159576|SCNN1A|6337|sodium channel, nonvoltage-gated 1 alpha
hg18_v1_chr3_+_46591048_46591048	0.649783	MSX1,2.p2	NM_001174136|TDGF1|6997|teratocarcinoma-derived growth factor 1
hg18_v1_chr5_+_73145098_73145115	0.646727	MSX1,2.p2	AK304761|RGNEF|64283|190 kDa guanine nucleotide exchange factor
hg18_v1_chr6_+_50894397_50894591	0.644357	MSX1,2.p2	NM_003221|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)	BC037225|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)	AK291172|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)	AK313749|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)	X95694|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)	DQ891443|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)	DQ894621|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)
hg18_v1_chr9_-_115880281_115880362	0.635339	MSX1,2.p2	CR607981|AMBP|259|alpha-1-microglobulin/bikunin precursor	X04494|AMBP|259|alpha-1-microglobulin/bikunin precursor
hg18_v1_chr3_+_101316463_101316463	0.601376	MSX1,2.p2	AK300704|C3orf26|84319|chromosome 3 open reading frame 26	NM_001167924|C3orf26|84319|chromosome 3 open reading frame 26
hg18_v1_chr3_+_101720753_101720778	0.60104	MSX1,2.p2	BC040355|TMEM45A|55076|transmembrane protein 45A
hg18_v1_chr4_+_71330797_71330797	0.600118	MSX1,2.p2	NM_001145006|MUC7|4589|mucin 7, secreted
hg18_v1_chr6_+_16237300_16237532	0.591612	MSX1,2.p2	BC002860|MYLIP|29116|myosin regulatory light chain interacting protein	AF258586|MYLIP|29116|myosin regulatory light chain interacting protein	AF187016|MYLIP|29116|myosin regulatory light chain interacting protein	AF006003|MYLIP|29116|myosin regulatory light chain interacting protein	AF212221|MYLIP|29116|myosin regulatory light chain interacting protein	EU176184|MYLIP|29116|myosin regulatory light chain interacting protein	BT007055|MYLIP|29116|myosin regulatory light chain interacting protein
hg18_v1_chr9_+_110664366_110664423	0.583376	MSX1,2.p2	BC014610|ACTL7A|10881|actin-like 7A	AK314981|ACTL7A|10881|actin-like 7A	NM_006687|ACTL7A|10881|actin-like 7A
hg18_v1_chr6_-_31789824_31789829	0.574271	MSX1,2.p2	
hg18_v1_chr8_-_8276598_8276666	0.568107	MSX1,2.p2	AK122582|SGK223|157285|homolog of rat pragma of Rnd2	NM_001080826|SGK223|157285|homolog of rat pragma of Rnd2
hg18_v1_chr1_+_110361634_110361667	0.553969	MSX1,2.p2	BC003631|AHCYL1|10768|adenosylhomocysteinase-like 1
hg18_v1_chr11_-_8789457_8789457	0.550033	MSX1,2.p2	NM_139157|ST5|6764|suppression of tumorigenicity 5	U15131|ST5|6764|suppression of tumorigenicity 5	U15780|ST5|6764|suppression of tumorigenicity 5
hg18_v1_chr7_-_16471817_16471998	0.548774	MSX1,2.p2	AB059270|SOSTDC1|25928|sclerostin domain containing 1	CR614752|SOSTDC1|25928|sclerostin domain containing 1	AK315682|SOSTDC1|25928|sclerostin domain containing 1	BC008484|SOSTDC1|25928|sclerostin domain containing 1	CR606874|SOSTDC1|25928|sclerostin domain containing 1	AF361494|SOSTDC1|25928|sclerostin domain containing 1	NM_015464|SOSTDC1|25928|sclerostin domain containing 1
hg18_v1_chr5_+_68703036_68703036	0.541858	MSX1,2.p2	AF085736|RAD17|5884|RAD17 homolog (S. pombe)	NM_133339|RAD17|5884|RAD17 homolog (S. pombe)
hg18_v1_chr2_-_237987554_237987567	0.533724	MSX1,2.p2	X52022|COL6A3|1293|collagen, type VI, alpha 3
hg18_v1_chr2_+_102169864_102169897	0.533431	MSX1,2.p2	AF284434|IL1RL2|8808|interleukin 1 receptor-like 2	NM_003854|IL1RL2|8808|interleukin 1 receptor-like 2	U49065|IL1RL2|8808|interleukin 1 receptor-like 2	BC107064|IL1RL2|8808|interleukin 1 receptor-like 2
hg18_v1_chr17_-_15109315_15109372	0.530778	MSX1,2.p2	BC091499|PMP22|5376|peripheral myelin protein 22	D11428|PMP22|5376|peripheral myelin protein 22	NM_000304|PMP22|5376|peripheral myelin protein 22
hg18_v1_chr10_+_115501202_115501202	0.524722	MSX1,2.p2	AK128811|C10orf81|79949|chromosome 10 open reading frame 81	NM_001193434|C10orf81|79949|chromosome 10 open reading frame 81	NM_001193435|C10orf81|79949|chromosome 10 open reading frame 81	NM_024889|C10orf81|79949|chromosome 10 open reading frame 81
hg18_v1_chr2_-_237987579_237987588	0.516518	MSX1,2.p2	NM_004369|COL6A3|1293|collagen, type VI, alpha 3	NM_057164|COL6A3|1293|collagen, type VI, alpha 3	NM_057165|COL6A3|1293|collagen, type VI, alpha 3	NM_057166|COL6A3|1293|collagen, type VI, alpha 3	NM_057167|COL6A3|1293|collagen, type VI, alpha 3
hg18_v1_chr3_-_127810087_127810087	0.510584	MSX1,2.p2	AB113648|TXNRD3IT1|645840|thioredoxin reductase 3 intronic transcript 1	NM_001039783|TXNRD3IT1|645840|thioredoxin reductase 3 intronic transcript 1
hg18_v1_chr2_+_220033777_220033791	0.509135	MSX1,2.p2	NM_001173476|SPEG|10290|SPEG complex locus	CR619747|SPEG|10290|SPEG complex locus
hg18_v1_chr5_+_139856688_139856810	0.507697	MSX1,2.p2	AF217646|ANKHD1|54882|ankyrin repeat and KH domain containing 1
hg18_v1_chr21_-_30460841_30460914	0.505451	MSX1,2.p2	BC101503|CLDN17|26285|claudin 17	BC101505|CLDN17|26285|claudin 17	NM_012131|CLDN17|26285|claudin 17	AY358094|CLDN17|26285|claudin 17
hg18_v1_chr2_-_237987545_237987552	0.50474	MSX1,2.p2	AK308451|COL6A3|1293|collagen, type VI, alpha 3	BX647500|COL6A3|1293|collagen, type VI, alpha 3
hg18_v1_chr2_-_237987553_237987553	0.499098	MSX1,2.p2	AK303290|COL6A3|1293|collagen, type VI, alpha 3
hg18_v1_chrX_+_115481848_115481883	0.498325	MSX1,2.p2	BC093710|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14	BC093712|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14
hg18_v1_chr10_+_7785290_7785326	0.491505	MSX1,2.p2	AK291379|ITIH2|3698|inter-alpha (globulin) inhibitor H2
hg18_v1_chr10_+_7785347_7785354	0.483405	MSX1,2.p2	BC132685|ITIH2|3698|inter-alpha (globulin) inhibitor H2
hg18_v1_chr16_-_55042614_55042809	0.481346	MSX1,2.p2	AJ001810|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21	CR456919|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21	AM392991|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21	AM393219|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21	DQ892142|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21	DQ895336|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21	BC001403|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21	CR621599|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21	CR617016|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21	CR616196|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21	BX647665|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21	CR603883|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21	NM_007006|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21	AK312721|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21	BX537360|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21
hg18_v1_chr2_-_237987509_237987539	0.479744	MSX1,2.p2	AK092021|COL6A3|1293|collagen, type VI, alpha 3	AK304870|COL6A3|1293|collagen, type VI, alpha 3	BC144595|COL6A3|1293|collagen, type VI, alpha 3	BC150625|COL6A3|1293|collagen, type VI, alpha 3	BC171790|COL6A3|1293|collagen, type VI, alpha 3
hg18_v1_chr16_-_21197072_21197117	0.477767	MSX1,2.p2	DQ892377|CRYM|1428|crystallin, mu	DQ895591|CRYM|1428|crystallin, mu	AK310424|CRYM|1428|crystallin, mu	U85772|CRYM|1428|crystallin, mu	L02950|CRYM|1428|crystallin, mu	BC008398|CRYM|1428|crystallin, mu
hg18_v1_chr2_+_234209838_234209907	0.477279	MSX1,2.p2	BC020971|UGT1A10|54575|UDP glucuronosyltransferase 1 family, polypeptide A10	NM_019075|UGT1A10|54575|UDP glucuronosyltransferase 1 family, polypeptide A10	BC069210|UGT1A10|54575|UDP glucuronosyltransferase 1 family, polypeptide A10	BC053576|UGT1A10|54575|UDP glucuronosyltransferase 1 family, polypeptide A10	AY435137|UGT1A10|54575|UDP glucuronosyltransferase 1 family, polypeptide A10	U89508|UGT1A10|54575|UDP glucuronosyltransferase 1 family, polypeptide A10
hg18_v1_chr1_+_151596953_151596972	0.471654	MSX1,2.p2	AK311882|S100A9|6280|S100 calcium binding protein A9	NM_002965|S100A9|6280|S100 calcium binding protein A9	X06233|S100A9|6280|S100 calcium binding protein A9	BC047681|S100A9|6280|S100 calcium binding protein A9	AF086362|S100A9|6280|S100 calcium binding protein A9
hg18_v1_chr16_+_55042924_55042934	0.45959	MSX1,2.p2	NM_018233|OGFOD1|55239|2-oxoglutarate and iron-dependent oxygenase domain containing 1	AK022752|OGFOD1|55239|2-oxoglutarate and iron-dependent oxygenase domain containing 1
hg18_v1_chr16_+_55042936_55043020	0.439765	MSX1,2.p2	AK001688|OGFOD1|55239|2-oxoglutarate and iron-dependent oxygenase domain containing 1	AK022130|OGFOD1|55239|2-oxoglutarate and iron-dependent oxygenase domain containing 1	BC032919|OGFOD1|55239|2-oxoglutarate and iron-dependent oxygenase domain containing 1	CR615197|OGFOD1|55239|2-oxoglutarate and iron-dependent oxygenase domain containing 1	AK304584|OGFOD1|55239|2-oxoglutarate and iron-dependent oxygenase domain containing 1	AB046832|OGFOD1|55239|2-oxoglutarate and iron-dependent oxygenase domain containing 1
hg18_v1_chr5_-_13997588_13997588	0.436779	MSX1,2.p2	AY045575|DNAH5|1767|dynein, axonemal, heavy chain 5	NM_001369|DNAH5|1767|dynein, axonemal, heavy chain 5
hg18_v1_chr9_-_115880366_115880371	0.434241	MSX1,2.p2	AY544123|AMBP|259|alpha-1-microglobulin/bikunin precursor
hg18_v1_chr5_-_59819642_59819681	0.43199	MSX1,2.p2	AY245866|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	AK307363|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	NM_001165899|PDE4D|5144|phosphodiesterase 4D, cAMP-specific
hg18_v1_chr2_-_51112743_51112782	0.430918	MSX1,2.p2	BC046631|NRXN1|9378|neurexin 1
hg18_v1_chr16_+_80626402_80626455	0.422227	MSX1,2.p2	CR595758|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2	CR600847|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2	CR601534|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2	BC009581|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2	BC059170|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2	L11708|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2	CR590260|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2
hg18_v1_chr7_+_116238309_116238359	0.419268	MSX1,2.p2	DQ655956|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2
hg18_v1_chr14_+_51025604_51025604	0.416842	MSX1,2.p2	AL833158|FRMD6|122786|FERM domain containing 6	NM_001042481|FRMD6|122786|FERM domain containing 6
hg18_v1_chr1_+_162795328_162795425	0.416552	MSX1,2.p2	NM_002585|PBX1|5087|pre-B-cell leukemia homeobox 1
hg18_v1_chr1_-_149245503_149246008	0.414844	MSX1,2.p2	BC032321|FAM63A|55793|family with sequence similarity 63, member A	AK303962|FAM63A|55793|family with sequence similarity 63, member A	AK125493|FAM63A|55793|family with sequence similarity 63, member A	AK002142|FAM63A|55793|family with sequence similarity 63, member A	NM_001163259|FAM63A|55793|family with sequence similarity 63, member A	NM_001163260|FAM63A|55793|family with sequence similarity 63, member A	CR594376|FAM63A|55793|family with sequence similarity 63, member A	BC014447|FAM63A|55793|family with sequence similarity 63, member A	NM_001040217|FAM63A|55793|family with sequence similarity 63, member A
hg18_v1_chr13_+_100902942_100903050	0.408998	MSX1,2.p2	AF072752|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)	NM_004791|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)	AK095875|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)	AB008375|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)	AK297744|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)	BC036788|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)	AK291340|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)	AK308194|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)
hg18_v1_chr6_+_12622286_12622290	0.405029	MSX1,2.p2	
hg18_v1_chr8_-_22145795_22145795	0.3958	MSX1,2.p2	NM_001099335|PHYHIP|9796|phytanoyl-CoA 2-hydroxylase interacting protein	NM_014759|PHYHIP|9796|phytanoyl-CoA 2-hydroxylase interacting protein
hg18_v1_chr3_-_121884091_121884107	0.395447	MSX1,2.p2	AK313563|HGD|3081|homogentisate 1,2-dioxygenase	NM_000187|HGD|3081|homogentisate 1,2-dioxygenase
hg18_v1_chr16_+_80626459_80626545	0.394309	MSX1,2.p2	CR623916|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2	DQ893100|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2	DQ896372|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2	CR599647|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2
hg18_v1_chr10_-_51678318_51678375	0.390872	MSX1,2.p2	AF250847|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2	BC107105|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2	AF449759|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2	NM_001143974|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2	NM_019893|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2
hg18_v1_chr16_+_80626456_80626457	0.385557	MSX1,2.p2	CR614043|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2
hg18_v1_chr2_-_21087435_21087487	0.384596	MSX1,2.p2	X03326|APOB|338|apolipoprotein B (including Ag(x) antigen)
hg18_v1_chr16_-_67943157_67943212	0.377467	MSX1,2.p2	DQ891397|TMED6|146456|transmembrane emp24 protein transport domain containing 6	DQ894576|TMED6|146456|transmembrane emp24 protein transport domain containing 6	AY358268|TMED6|146456|transmembrane emp24 protein transport domain containing 6	BC020827|TMED6|146456|transmembrane emp24 protein transport domain containing 6	NM_144676|TMED6|146456|transmembrane emp24 protein transport domain containing 6
hg18_v1_chr1_+_200246370_200246444	0.376192	MSX1,2.p2	U66894|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )	AK225446|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )	CR598418|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )	CR597744|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )	AF517841|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )
hg18_v1_chr16_-_11918019_11918019	0.373905	MSX1,2.p2	NM_001130007|GSPT1|2935|G1 to S phase transition 1
hg18_v1_chr2_-_215957927_215957938	0.372014	MSX1,2.p2	U42458|FN1|2335|fibronectin 1
hg18_v1_chr8_-_145613058_145613106	0.369498	MSX1,2.p2	BC062625|SLC39A4|55630|solute carrier family 39 (zinc transporter), member 4	AK025537|SLC39A4|55630|solute carrier family 39 (zinc transporter), member 4	NM_130849|SLC39A4|55630|solute carrier family 39 (zinc transporter), member 4
hg18_v1_chr5_+_60969392_60969392	0.368782	MSX1,2.p2	AK094862|FLJ37543|285668|hypothetical protein FLJ37543	NM_173667|FLJ37543|285668|hypothetical protein FLJ37543
hg18_v1_chr4_-_155753332_155753410	0.368229	MSX1,2.p2	NM_000509|FGG|2266|fibrinogen gamma chain	NM_021870|FGG|2266|fibrinogen gamma chain
hg18_v1_chr19_+_53016910_53017024	0.366101	MSX1,2.p2	NM_000554|CRX|1406|cone-rod homeobox	DQ426868|CRX|1406|cone-rod homeobox	BC016664|CRX|1406|cone-rod homeobox	BC053672|CRX|1406|cone-rod homeobox
hg18_v1_chr9_+_134843918_134843918	0.364476	MSX1,2.p2	AY428733|GFI1B|8328|growth factor independent 1B transcription repressor	NM_001135031|GFI1B|8328|growth factor independent 1B transcription repressor	NM_004188|GFI1B|8328|growth factor independent 1B transcription repressor
hg18_v1_chr11_-_64484184_64484184	0.362339	MSX1,2.p2	BC106951|C11orf85|283129|chromosome 11 open reading frame 85	BC106952|C11orf85|283129|chromosome 11 open reading frame 85	NM_001037225|C11orf85|283129|chromosome 11 open reading frame 85
hg18_v1_chr9_-_110658030_110658095	0.360957	MSX1,2.p2	BC033789|ACTL7B|10880|actin-like 7B	AK313871|ACTL7B|10880|actin-like 7B	NM_006686|ACTL7B|10880|actin-like 7B
hg18_v1_chr17_+_38306339_38306419	0.359932	MSX1,2.p2	AK303771|G6PC|2538|glucose-6-phosphatase, catalytic subunit	NM_000151|G6PC|2538|glucose-6-phosphatase, catalytic subunit	U01120|G6PC|2538|glucose-6-phosphatase, catalytic subunit	AK313982|G6PC|2538|glucose-6-phosphatase, catalytic subunit	BC130478|G6PC|2538|glucose-6-phosphatase, catalytic subunit	BC136369|G6PC|2538|glucose-6-phosphatase, catalytic subunit
hg18_v1_chr8_+_67096344_67096402	0.359475	MSX1,2.p2	NM_033105|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta	BC016742|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta	AF368276|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta	AL133660|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta
hg18_v1_chr2_+_138438277_138438531	0.35808	MSX1,2.p2	NM_001024074|HNMT|3176|histamine N-methyltransferase	NM_001024075|HNMT|3176|histamine N-methyltransferase	NM_006895|HNMT|3176|histamine N-methyltransferase	AF523356|HNMT|3176|histamine N-methyltransferase	AF523357|HNMT|3176|histamine N-methyltransferase	AF523358|HNMT|3176|histamine N-methyltransferase	AF523359|HNMT|3176|histamine N-methyltransferase	AF523360|HNMT|3176|histamine N-methyltransferase	U08092|HNMT|3176|histamine N-methyltransferase	BC005907|HNMT|3176|histamine N-methyltransferase	AK301462|HNMT|3176|histamine N-methyltransferase	AK313804|HNMT|3176|histamine N-methyltransferase	BC020677|HNMT|3176|histamine N-methyltransferase	D16224|HNMT|3176|histamine N-methyltransferase	DQ891166|HNMT|3176|histamine N-methyltransferase	DQ894348|HNMT|3176|histamine N-methyltransferase
hg18_v1_chr14_+_22375632_22375648	0.356878	MSX1,2.p2	NM_004995|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)	AK312657|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)	AK291325|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)	BC064803|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)
hg18_v1_chr10_+_685887_686016	0.352846	MSX1,2.p2	AK096000|C10orf108|414235|chromosome 10 open reading frame 108	AK296168|C10orf108|414235|chromosome 10 open reading frame 108	AK096013|C10orf108|414235|chromosome 10 open reading frame 108
hg18_v1_chr19_-_14030970_14030970	0.351578	MSX1,2.p2	NM_001145028|PALM3|342979|paralemmin 3
hg18_v1_chr13_-_45577144_45577211	0.348999	MSX1,2.p2	BT006936|CPB2|1361|carboxypeptidase B2 (plasma)	DQ890567|CPB2|1361|carboxypeptidase B2 (plasma)	EU176478|CPB2|1361|carboxypeptidase B2 (plasma)	CR626525|CPB2|1361|carboxypeptidase B2 (plasma)	AK290829|CPB2|1361|carboxypeptidase B2 (plasma)	AB011969|CPB2|1361|carboxypeptidase B2 (plasma)	M75106|CPB2|1361|carboxypeptidase B2 (plasma)	BC007057|CPB2|1361|carboxypeptidase B2 (plasma)	NM_001872|CPB2|1361|carboxypeptidase B2 (plasma)	NM_016413|CPB2|1361|carboxypeptidase B2 (plasma)
hg18_v1_chr2_-_56266408_56266418	0.348863	MSX1,2.p2	AK311113|LOC100129434|100129434|hypothetical LOC100129434
hg18_v1_chr3_+_125586241_125586386	0.347114	MSX1,2.p2	AK131379|KALRN|8997|kalirin, RhoGEF kinase
hg18_v1_chr11_-_102100833_102100894	0.346598	MSX1,2.p2	BC074988|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)	BC074989|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)	BC144094|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)	J05556|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)	AK292659|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)	AK303388|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)	AK303511|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)	AK313374|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)	NM_002424|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)
hg18_v1_chr12_+_52105131_52105136	0.340533	MSX1,2.p2	CR627318|AMHR2|269|anti-Mullerian hormone receptor, type II
hg18_v1_chr6_-_26038817_26038924	0.33854	MSX1,2.p2	U90544|SLC17A2|10246|solute carrier family 17 (sodium phosphate), member 2	NM_005835|SLC17A2|10246|solute carrier family 17 (sodium phosphate), member 2
hg18_v1_chr3_-_167037861_167037914	0.337372	MSX1,2.p2	M16474|BCHE|590|butyrylcholinesterase	BC018141|BCHE|590|butyrylcholinesterase	BC008396|BCHE|590|butyrylcholinesterase	AK292063|BCHE|590|butyrylcholinesterase	CR611139|BCHE|590|butyrylcholinesterase	M16541|BCHE|590|butyrylcholinesterase
hg18_v1_chr1_+_78243181_78243223	0.332693	MSX1,2.p2	U40992|DNAJB4|11080|DnaJ (Hsp40) homolog, subfamily B, member 4	CR604945|DNAJB4|11080|DnaJ (Hsp40) homolog, subfamily B, member 4	AK313205|DNAJB4|11080|DnaJ (Hsp40) homolog, subfamily B, member 4	AB209922|DNAJB4|11080|DnaJ (Hsp40) homolog, subfamily B, member 4	BC034721|DNAJB4|11080|DnaJ (Hsp40) homolog, subfamily B, member 4	NM_007034|DNAJB4|11080|DnaJ (Hsp40) homolog, subfamily B, member 4
hg18_v1_chr8_-_145613034_145613039	0.33209	MSX1,2.p2	AK290563|SLC39A4|55630|solute carrier family 39 (zinc transporter), member 4
hg18_v1_chr1_+_195055483_195055605	0.329159	MSX1,2.p2	NM_002113|CFHR1|3078|complement factor H-related 1	BC107771|CFHR1|3078|complement factor H-related 1	AK290830|CFHR1|3078|complement factor H-related 1	BC016755|CFHR1|3078|complement factor H-related 1	M65292|CFHR1|3078|complement factor H-related 1	M65293|CFHR1|3078|complement factor H-related 1	X56210|CFHR1|3078|complement factor H-related 1	DQ892762|CFHR1|3078|complement factor H-related 1	DQ896007|CFHR1|3078|complement factor H-related 1	X56209|CFHR1|3078|complement factor H-related 1
hg18_v1_chr8_+_75899326_75899326	0.326054	MSX1,2.p2	CR749657|PI15|51050|peptidase inhibitor 15	NM_015886|PI15|51050|peptidase inhibitor 15
hg18_v1_chr5_+_36644187_36644320	0.323927	MSX1,2.p2	NM_001166695|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	U03504|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AY954110|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3
hg18_v1_chr3_-_150578103_150578142	0.31784	MSX1,2.p2	CR617959|TM4SF1|4071|transmembrane 4 L six family member 1	BC008442|TM4SF1|4071|transmembrane 4 L six family member 1
hg18_v1_chr13_-_85271329_85271551	0.317649	MSX1,2.p2	BX648640|SLITRK6|84189|SLIT and NTRK-like family, member 6	BC101070|SLITRK6|84189|SLIT and NTRK-like family, member 6	BC101071|SLITRK6|84189|SLIT and NTRK-like family, member 6	BC101072|SLITRK6|84189|SLIT and NTRK-like family, member 6	BC101073|SLITRK6|84189|SLIT and NTRK-like family, member 6	NM_032229|SLITRK6|84189|SLIT and NTRK-like family, member 6	AK292793|SLITRK6|84189|SLIT and NTRK-like family, member 6
hg18_v1_chr2_-_21081694_21081813	0.313674	MSX1,2.p2	X03325|APOB|338|apolipoprotein B (including Ag(x) antigen)
hg18_v1_chr12_+_108038774_108038787	0.313043	MSX1,2.p2	AY382667|ACACB|32|acetyl-CoA carboxylase beta
hg18_v1_chr5_+_126887056_126887131	0.308843	MSX1,2.p2	AK090486|PRRC1|133619|proline-rich coiled-coil 1	EU831910|PRRC1|133619|proline-rich coiled-coil 1	EU832004|PRRC1|133619|proline-rich coiled-coil 1
hg18_v1_chr2_-_219614481_219614492	0.308291	MSX1,2.p2	AK127189|CCDC108|255101|coiled-coil domain containing 108	AK302678|CCDC108|255101|coiled-coil domain containing 108	AK302688|CCDC108|255101|coiled-coil domain containing 108	BC031585|CCDC108|255101|coiled-coil domain containing 108	NM_152389|CCDC108|255101|coiled-coil domain containing 108	NM_194302|CCDC108|255101|coiled-coil domain containing 108	BC047637|CCDC108|255101|coiled-coil domain containing 108
hg18_v1_chr14_-_104330982_104330982	0.30811	MSX1,2.p2	BX648205|AKT1|207|v-akt murine thymoma viral oncogene homolog 1	NM_005163|AKT1|207|v-akt murine thymoma viral oncogene homolog 1
hg18_v1_chr12_-_9252227_9252232	0.302303	MSX1,2.p2	BC111756|PZP|5858|pregnancy-zone protein	AK313639|PZP|5858|pregnancy-zone protein	NM_002864|PZP|5858|pregnancy-zone protein	X54380|PZP|5858|pregnancy-zone protein
hg18_v1_chr12_+_79362256_79362256	0.299626	MSX1,2.p2	NM_001145026|PTPRQ|374462|protein tyrosine phosphatase, receptor type, Q
hg18_v1_chr1_+_100089118_100089186	0.298589	MSX1,2.p2	NM_000646|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	U84011|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	AB208867|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase
hg18_v1_chr3_+_161877640_161877658	0.292198	MSX1,2.p2	AK026248|ARL14|80117|ADP-ribosylation factor-like 14	NM_025047|ARL14|80117|ADP-ribosylation factor-like 14	BC034354|ARL14|80117|ADP-ribosylation factor-like 14
hg18_v1_chr10_+_7785235_7785288	0.290632	MSX1,2.p2	NM_002216|ITIH2|3698|inter-alpha (globulin) inhibitor H2
hg18_v1_chr4_+_15038726_15038765	0.284471	MSX1,2.p2	NM_031911|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7	AF329839|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7
hg18_v1_chr6_+_132901119_132901121	0.280579	MSX1,2.p2	BC069083|TAAR9|134860|trace amine associated receptor 9 (gene/pseudogene)	NM_175057|TAAR9|134860|trace amine associated receptor 9 (gene/pseudogene)	AY183469|TAAR9|134860|trace amine associated receptor 9 (gene/pseudogene)
hg18_v1_chr7_+_94377145_94377145	0.278783	MSX1,2.p2	NM_001166161|PPP1R9A|55607|protein phosphatase 1, regulatory (inhibitor) subunit 9A	NM_001166162|PPP1R9A|55607|protein phosphatase 1, regulatory (inhibitor) subunit 9A	NM_001166163|PPP1R9A|55607|protein phosphatase 1, regulatory (inhibitor) subunit 9A
hg18_v1_chr3_-_150578023_150578089	0.275051	MSX1,2.p2	CR456953|TM4SF1|4071|transmembrane 4 L six family member 1	BC010166|TM4SF1|4071|transmembrane 4 L six family member 1
hg18_v1_chr3_+_185300660_185300854	0.267567	MSX1,2.p2	AY159813|HTR3E|285242|5-hydroxytryptamine (serotonin) receptor 3, family member E	NM_182589|HTR3E|285242|5-hydroxytryptamine (serotonin) receptor 3, family member E	BC101182|HTR3E|285242|5-hydroxytryptamine (serotonin) receptor 3, family member E	BC101183|HTR3E|285242|5-hydroxytryptamine (serotonin) receptor 3, family member E	BC101184|HTR3E|285242|5-hydroxytryptamine (serotonin) receptor 3, family member E	BC101185|HTR3E|285242|5-hydroxytryptamine (serotonin) receptor 3, family member E	AY349353|HTR3E|285242|5-hydroxytryptamine (serotonin) receptor 3, family member E	EU165354|HTR3E|285242|5-hydroxytryptamine (serotonin) receptor 3, family member E
hg18_v1_chrX_-_43717864_43717864	0.266318	MSX1,2.p2	NM_000266|NDP|4693|Norrie disease (pseudoglioma)
hg18_v1_chr1_+_40977092_40977178	0.262753	MSX1,2.p2	CR596697|NFYC|4802|nuclear transcription factor Y, gamma	AF191744|NFYC|4802|nuclear transcription factor Y, gamma	BT020081|NFYC|4802|nuclear transcription factor Y, gamma	U62296|NFYC|4802|nuclear transcription factor Y, gamma
hg18_v1_chr14_-_34252695_34252784	0.262562	MSX1,2.p2	BC011444|CFL2|1073|cofilin 2 (muscle)	AK314157|CFL2|1073|cofilin 2 (muscle)	NM_021914|CFL2|1073|cofilin 2 (muscle)	AF134802|CFL2|1073|cofilin 2 (muscle)
hg18_v1_chr17_+_39213328_39213353	0.260803	MSX1,2.p2	BC054872|C17orf105|284067|chromosome 17 open reading frame 105	BC070324|C17orf105|284067|chromosome 17 open reading frame 105	NM_001136483|C17orf105|284067|chromosome 17 open reading frame 105	BC146971|C17orf105|284067|chromosome 17 open reading frame 105	AK125817|C17orf105|284067|chromosome 17 open reading frame 105
hg18_v1_chr17_+_30472710_30472825	0.259345	MSX1,2.p2	AK313775|FNDC8|54752|fibronectin type III domain containing 8	NM_017559|FNDC8|54752|fibronectin type III domain containing 8	BC024002|FNDC8|54752|fibronectin type III domain containing 8	AK225743|FNDC8|54752|fibronectin type III domain containing 8	AL133054|FNDC8|54752|fibronectin type III domain containing 8	EU831600|FNDC8|54752|fibronectin type III domain containing 8	EU831687|FNDC8|54752|fibronectin type III domain containing 8
hg18_v1_chr5_-_22248630_22248646	0.255261	MSX1,2.p2	AK314800|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)
hg18_v1_chr11_-_27637771_27637771	0.255175	MSX1,2.p2	EF689009|BDNF|627|brain-derived neurotrophic factor	EF689010|BDNF|627|brain-derived neurotrophic factor	NM_001143816|BDNF|627|brain-derived neurotrophic factor	NM_170735|BDNF|627|brain-derived neurotrophic factor
hg18_v1_chr5_+_68702617_68702671	0.254477	MSX1,2.p2	NM_133340|RAD17|5884|RAD17 homolog (S. pombe)	NM_133341|RAD17|5884|RAD17 homolog (S. pombe)	AJ001642|RAD17|5884|RAD17 homolog (S. pombe)	AJ004977|RAD17|5884|RAD17 homolog (S. pombe)	AF098533|RAD17|5884|RAD17 homolog (S. pombe)	AF098534|RAD17|5884|RAD17 homolog (S. pombe)
hg18_v1_chr9_-_115880494_115880576	0.253869	MSX1,2.p2	AK310776|AMBP|259|alpha-1-microglobulin/bikunin precursor	BC041593|AMBP|259|alpha-1-microglobulin/bikunin precursor	NM_001633|AMBP|259|alpha-1-microglobulin/bikunin precursor
hg18_v1_chr12_-_112058403_112058426	0.253489	MSX1,2.p2	AF086713|RASAL1|8437|RAS protein activator like 1 (GAP1 like)	AB208935|RASAL1|8437|RAS protein activator like 1 (GAP1 like)	AK294350|RASAL1|8437|RAS protein activator like 1 (GAP1 like)	NM_001193520|RASAL1|8437|RAS protein activator like 1 (GAP1 like)	NM_004658|RASAL1|8437|RAS protein activator like 1 (GAP1 like)
hg18_v1_chr4_+_106693225_106693237	0.251218	MSX1,2.p2	AK000191|ARHGEF38|54848|Rho guanine nucleotide exchange factor (GEF) 38	NM_017700|ARHGEF38|54848|Rho guanine nucleotide exchange factor (GEF) 38	BC105695|ARHGEF38|54848|Rho guanine nucleotide exchange factor (GEF) 38
hg18_v1_chr9_+_18464090_18464103	0.249941	MSX1,2.p2	AK290667|ADAMTSL1|92949|ADAMTS-like 1	AY358327|ADAMTSL1|92949|ADAMTS-like 1	NM_001040272|ADAMTSL1|92949|ADAMTS-like 1	NM_052866|ADAMTSL1|92949|ADAMTS-like 1
hg18_v1_chr7_+_38984133_38984133	0.249228	MSX1,2.p2	NM_001166018|POU6F2|11281|POU class 6 homeobox 2	NM_007252|POU6F2|11281|POU class 6 homeobox 2
hg18_v1_chr1_+_119851348_119851622	0.247599	MSX1,2.p2	CR622398|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	NM_000862|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR621102|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR603707|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR613080|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR615472|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR614968|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR601599|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR602148|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR611232|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR611960|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR626548|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR593718|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR617799|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR594828|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	S45679|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR590386|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR608288|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR617775|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR608233|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR615908|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR595151|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR600450|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR623220|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	AK291556|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR593000|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR625130|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR592878|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR599088|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR601348|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR609339|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR612644|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR615721|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR616641|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR617417|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR618495|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	BC031999|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR606137|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR592176|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR597734|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	M35493|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	X53321|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	CR619906|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	M27137|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	DQ891161|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	DQ894342|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	X55997|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1
hg18_v1_chr3_+_12367993_12368131	0.246939	MSX1,2.p2	NM_015869|PPARG|5468|peroxisome proliferator-activated receptor gamma	U79012|PPARG|5468|peroxisome proliferator-activated receptor gamma	AB451337|PPARG|5468|peroxisome proliferator-activated receptor gamma	AB451486|PPARG|5468|peroxisome proliferator-activated receptor gamma	U63415|PPARG|5468|peroxisome proliferator-activated receptor gamma	AJ563369|PPARG|5468|peroxisome proliferator-activated receptor gamma
hg18_v1_chrX_-_74292800_74292856	0.246908	MSX1,2.p2	AF078777|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7	AK307414|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7	AF133659|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7	BT009918|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7	DQ890692|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7	EU176476|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7	BC006323|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7	AF038950|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7	BX537833|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7	AK294657|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7	AK001418|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7	NM_004299|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7
hg18_v1_chr5_-_42847716_42847780	0.246197	MSX1,2.p2	Z11793|SEPP1|6414|selenoprotein P, plasma, 1	BC040075|SEPP1|6414|selenoprotein P, plasma, 1	BC046152|SEPP1|6414|selenoprotein P, plasma, 1	BC058919|SEPP1|6414|selenoprotein P, plasma, 1	AK225801|SEPP1|6414|selenoprotein P, plasma, 1	AL833145|SEPP1|6414|selenoprotein P, plasma, 1	BC005244|SEPP1|6414|selenoprotein P, plasma, 1	BC015875|SEPP1|6414|selenoprotein P, plasma, 1	BC030009|SEPP1|6414|selenoprotein P, plasma, 1	NM_001085486|SEPP1|6414|selenoprotein P, plasma, 1	NM_001093726|SEPP1|6414|selenoprotein P, plasma, 1	NM_005410|SEPP1|6414|selenoprotein P, plasma, 1
hg18_v1_chrX_+_38096679_38096857	0.242203	MSX1,2.p2	BC107153|OTC|5009|ornithine carbamoyltransferase	BC107154|OTC|5009|ornithine carbamoyltransferase	NM_000531|OTC|5009|ornithine carbamoyltransferase	BC114496|OTC|5009|ornithine carbamoyltransferase	AK292757|OTC|5009|ornithine carbamoyltransferase	K02100|OTC|5009|ornithine carbamoyltransferase	BC074745|OTC|5009|ornithine carbamoyltransferase
hg18_v1_chrX_+_54963953_54964012	0.241111	MSX1,2.p2	AK299568|TRO|7216|trophinin	AF349719|TRO|7216|trophinin	AF349720|TRO|7216|trophinin	AF349721|TRO|7216|trophinin	AF349722|TRO|7216|trophinin	NM_001039705|TRO|7216|trophinin	NM_016157|TRO|7216|trophinin	NM_177556|TRO|7216|trophinin	AK027489|TRO|7216|trophinin	AK296329|TRO|7216|trophinin	BC026914|TRO|7216|trophinin	AB029037|TRO|7216|trophinin	AK225841|TRO|7216|trophinin
hg18_v1_chr5_-_138238877_138238886	0.241001	MSX1,2.p2	CR600503|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2
hg18_v1_chr17_+_7732759_7732893	0.240594	MSX1,2.p2	NM_001005273|CHD3|1107|chromodomain helicase DNA binding protein 3	NM_005852|CHD3|1107|chromodomain helicase DNA binding protein 3	U91543|CHD3|1107|chromodomain helicase DNA binding protein 3
hg18_v1_chr1_-_145163520_145163618	0.240581	MSX1,2.p2	BC035687|FMO5|2330|flavin containing monooxygenase 5	L37080|FMO5|2330|flavin containing monooxygenase 5	Z47553|FMO5|2330|flavin containing monooxygenase 5	BC020872|FMO5|2330|flavin containing monooxygenase 5	AK222728|FMO5|2330|flavin containing monooxygenase 5	AK225739|FMO5|2330|flavin containing monooxygenase 5
hg18_v1_chrX_-_24600661_24600899	0.236464	MSX1,2.p2	BC045634|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	AK296333|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	AK226121|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	NM_001163264|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta
hg18_v1_chr5_-_35083996_35083996	0.232457	MSX1,2.p2	NM_031900|AGXT2|64902|alanine--glyoxylate aminotransferase 2
hg18_v1_chr10_+_49279647_49279709	0.229262	MSX1,2.p2	BC130570|MAPK8|5599|mitogen-activated protein kinase 8	BC130572|MAPK8|5599|mitogen-activated protein kinase 8	BC144063|MAPK8|5599|mitogen-activated protein kinase 8	L26318|MAPK8|5599|mitogen-activated protein kinase 8	NM_002750|MAPK8|5599|mitogen-activated protein kinase 8	NM_139046|MAPK8|5599|mitogen-activated protein kinase 8	NM_139047|MAPK8|5599|mitogen-activated protein kinase 8	NM_139049|MAPK8|5599|mitogen-activated protein kinase 8	U35004|MAPK8|5599|mitogen-activated protein kinase 8	U35005|MAPK8|5599|mitogen-activated protein kinase 8	U34822|MAPK8|5599|mitogen-activated protein kinase 8	AB451231|MAPK8|5599|mitogen-activated protein kinase 8	AB451271|MAPK8|5599|mitogen-activated protein kinase 8	AB451354|MAPK8|5599|mitogen-activated protein kinase 8	AB451398|MAPK8|5599|mitogen-activated protein kinase 8	DQ234352|MAPK8|5599|mitogen-activated protein kinase 8
hg18_v1_chr20_-_29360048_29360048	0.227454	MSX1,2.p2	DQ012020|DEFB116|245930|defensin, beta 116	NM_001037731|DEFB116|245930|defensin, beta 116
hg18_v1_chr1_-_85816520_85816637	0.223486	MSX1,2.p2	BX648145|DDAH1|23576|dimethylarginine dimethylaminohydrolase 1	NM_001134445|DDAH1|23576|dimethylarginine dimethylaminohydrolase 1	AK304876|DDAH1|23576|dimethylarginine dimethylaminohydrolase 1
hg18_v1_chr4_+_106851415_106851418	0.219499	MSX1,2.p2	AK292355|GSTCD|79807|glutathione S-transferase, C-terminal domain containing	BC032942|GSTCD|79807|glutathione S-transferase, C-terminal domain containing	NM_001031720|GSTCD|79807|glutathione S-transferase, C-terminal domain containing
hg18_v1_chr6_+_16237264_16237299	0.218635	MSX1,2.p2	AK074391|MYLIP|29116|myosin regulatory light chain interacting protein	AK314648|MYLIP|29116|myosin regulatory light chain interacting protein	NM_013262|MYLIP|29116|myosin regulatory light chain interacting protein
hg18_v1_chr4_-_54152480_54152522	0.218394	MSX1,2.p2	AK056823|LNX1|84708|ligand of numb-protein X 1	NM_001126328|LNX1|84708|ligand of numb-protein X 1
hg18_v1_chr1_+_66772393_66772552	0.217581	MSX1,2.p2	AK299941|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1	AK298970|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1	NM_032291|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1	AB210039|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1	AL136561|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1
hg18_v1_chr22_+_38296703_38296703	0.214007	MSX1,2.p2	AF129133|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit	AF142567|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit	AF211189|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit	AF393329|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit	NM_001003406|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit	NM_021096|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit
hg18_v1_chr4_-_186970366_186970403	0.212828	MSX1,2.p2	AK225327|SORBS2|8470|sorbin and SH3 domain containing 2	AF049884|SORBS2|8470|sorbin and SH3 domain containing 2	CR625998|SORBS2|8470|sorbin and SH3 domain containing 2	NM_003603|SORBS2|8470|sorbin and SH3 domain containing 2	NM_001145670|SORBS2|8470|sorbin and SH3 domain containing 2
hg18_v1_chr21_+_44729875_44729881	0.211315	MSX1,2.p2	
hg18_v1_chr2_-_208736533_208736610	0.208609	MSX1,2.p2	EF426311|CRYGA|1418|crystallin, gamma A	NM_014617|CRYGA|1418|crystallin, gamma A	BC114456|CRYGA|1418|crystallin, gamma A
hg18_v1_chr17_+_46176105_46176113	0.204049	MSX1,2.p2	AF147357|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)
hg18_v1_chr6_-_24491498_24491498	0.202457	MSX1,2.p2	BC050704|DCDC2|51473|doublecortin domain containing 2	NM_001195610|DCDC2|51473|doublecortin domain containing 2
hg18_v1_chr1_-_118273701_118273709	0.197607	MSX1,2.p2	BC013132|GDAP2|54834|ganglioside induced differentiation associated protein 2
hg18_v1_chr15_+_60726801_60726801	0.196165	MSX1,2.p2	AF402000|TLN2|83660|talin 2	NM_015059|TLN2|83660|talin 2
hg18_v1_chr16_-_88656092_88656233	0.19579	MSX1,2.p2	BC107033|PRDM7|11105|PR domain containing 7	AF274347|PRDM7|11105|PR domain containing 7	AF274348|PRDM7|11105|PR domain containing 7	NM_052996|PRDM7|11105|PR domain containing 7
hg18_v1_chr3_-_71262426_71262435	0.194408	MSX1,2.p2	AK297649|FOXP1|27086|forkhead box P1	BX647682|FOXP1|27086|forkhead box P1
hg18_v1_chr11_-_58099884_58099965	0.192537	MSX1,2.p2	BC007490|LPXN|9404|leupaxin	BC019035|LPXN|9404|leupaxin	CR591836|LPXN|9404|leupaxin	CR612739|LPXN|9404|leupaxin	AK313306|LPXN|9404|leupaxin	AK223165|LPXN|9404|leupaxin	AK301093|LPXN|9404|leupaxin	AF062075|LPXN|9404|leupaxin	NM_004811|LPXN|9404|leupaxin
hg18_v1_chr2_+_165804157_165804200	0.192309	MSX1,2.p2	AK289656|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	NM_001040142|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	BC029489|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	BC047398|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	BC048417|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit
hg18_v1_chr14_-_72523404_72523416	0.192015	MSX1,2.p2	AK098542|ZFYVE1|53349|zinc finger, FYVE domain containing 1	AF311602|ZFYVE1|53349|zinc finger, FYVE domain containing 1	NM_178441|ZFYVE1|53349|zinc finger, FYVE domain containing 1
hg18_v1_chr12_-_15757114_15757149	0.189879	MSX1,2.p2	AK292931|EPS8|2059|epidermal growth factor receptor pathway substrate 8
hg18_v1_chr3_+_45042754_45042858	0.189204	MSX1,2.p2	AK312093|CLEC3B|7123|C-type lectin domain family 3, member B	NM_003278|CLEC3B|7123|C-type lectin domain family 3, member B	X64559|CLEC3B|7123|C-type lectin domain family 3, member B	BC011024|CLEC3B|7123|C-type lectin domain family 3, member B	CR595857|CLEC3B|7123|C-type lectin domain family 3, member B	CR541981|CLEC3B|7123|C-type lectin domain family 3, member B	CR542009|CLEC3B|7123|C-type lectin domain family 3, member B
hg18_v1_chr14_-_94669547_94669592	0.18745	MSX1,2.p2	HM595745|DICER1|23405|dicer 1, ribonuclease type III	NM_001195573|DICER1|23405|dicer 1, ribonuclease type III
hg18_v1_chr16_+_19635199_19635278	0.187423	MSX1,2.p2	AF520569|IQCK|124152|IQ motif containing K	AF520570|IQCK|124152|IQ motif containing K	AK000122|IQCK|124152|IQ motif containing K	NM_153208|IQCK|124152|IQ motif containing K
hg18_v1_chr12_+_56114724_56114936	0.186426	MSX1,2.p2	AK314849|INHBC|3626|inhibin, beta C	BC020693|INHBC|3626|inhibin, beta C	NM_005538|INHBC|3626|inhibin, beta C	BC130324|INHBC|3626|inhibin, beta C	BC130326|INHBC|3626|inhibin, beta C
hg18_v1_chr1_+_205344200_205344345	0.186193	MSX1,2.p2	BC022312|C4BPA|722|complement component 4 binding protein, alpha	NM_000715|C4BPA|722|complement component 4 binding protein, alpha	AK303798|C4BPA|722|complement component 4 binding protein, alpha	AK313164|C4BPA|722|complement component 4 binding protein, alpha	M31452|C4BPA|722|complement component 4 binding protein, alpha	AK303793|C4BPA|722|complement component 4 binding protein, alpha
hg18_v1_chr20_-_34707971_34708012	0.185792	MSX1,2.p2	BC042041|SLA2|84174|Src-like-adaptor 2	NM_032214|SLA2|84174|Src-like-adaptor 2	NM_175077|SLA2|84174|Src-like-adaptor 2	AK291513|SLA2|84174|Src-like-adaptor 2
hg18_v1_chr20_+_43269051_43269108	0.184869	MSX1,2.p2	NM_003007|SEMG1|6406|semenogelin I	BC005229|SEMG1|6406|semenogelin I	BC007096|SEMG1|6406|semenogelin I	BC011442|SEMG1|6406|semenogelin I	BC055416|SEMG1|6406|semenogelin I	J04440|SEMG1|6406|semenogelin I	BT007177|SEMG1|6406|semenogelin I
hg18_v1_chr3_-_11660395_11660398	0.181889	MSX1,2.p2	NM_001128219|VGLL4|9686|vestigial like 4 (Drosophila)
hg18_v1_chr1_+_200246312_200246351	0.175413	MSX1,2.p2	NM_001114309|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )	NM_004433|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )	AK309265|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )	AK312273|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )	U97156|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )	BC003569|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )	CR609083|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )	U73843|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )	U73844|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )	AF016295|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )
hg18_v1_chr3_+_52803823_52803855	0.173816	MSX1,2.p2	NM_002217|ITIH3|3699|inter-alpha (globulin) inhibitor H3	X67055|ITIH3|3699|inter-alpha (globulin) inhibitor H3	AK222757|ITIH3|3699|inter-alpha (globulin) inhibitor H3	AK298450|ITIH3|3699|inter-alpha (globulin) inhibitor H3	BC107604|ITIH3|3699|inter-alpha (globulin) inhibitor H3	BC107605|ITIH3|3699|inter-alpha (globulin) inhibitor H3	BC107814|ITIH3|3699|inter-alpha (globulin) inhibitor H3
hg18_v1_chr11_-_10671608_10671704	0.172604	MSX1,2.p2	AK301296|MRVI1|10335|murine retrovirus integration site 1 homolog	AK127209|MRVI1|10335|murine retrovirus integration site 1 homolog	NM_001100167|MRVI1|10335|murine retrovirus integration site 1 homolog	BC117127|MRVI1|10335|murine retrovirus integration site 1 homolog
hg18_v1_chr5_-_35974493_35974637	0.171697	MSX1,2.p2	NM_001042625|CAPSL|133690|calcyphosine-like	BC017586|CAPSL|133690|calcyphosine-like	NM_144647|CAPSL|133690|calcyphosine-like
hg18_v1_chr11_+_114054409_114054507	0.170844	MSX1,2.p2	NM_182495|FAM55B|120406|family with sequence similarity 55, member B	AK057953|FAM55B|120406|family with sequence similarity 55, member B	BC111797|FAM55B|120406|family with sequence similarity 55, member B
hg18_v1_chr3_-_121883647_121883819	0.170387	MSX1,2.p2	EU831603|HGD|3081|homogentisate 1,2-dioxygenase	EU831690|HGD|3081|homogentisate 1,2-dioxygenase	BC071757|HGD|3081|homogentisate 1,2-dioxygenase	Z75048|HGD|3081|homogentisate 1,2-dioxygenase	U63008|HGD|3081|homogentisate 1,2-dioxygenase	AK290782|HGD|3081|homogentisate 1,2-dioxygenase	BC020792|HGD|3081|homogentisate 1,2-dioxygenase	AF045167|HGD|3081|homogentisate 1,2-dioxygenase
hg18_v1_chr1_+_118273869_118273884	0.169257	MSX1,2.p2	BC058836|WDR3|10885|WD repeat domain 3
hg18_v1_chr9_+_74326536_74326536	0.162336	MSX1,2.p2	AF417578|TMC1|117531|transmembrane channel-like 1	NM_138691|TMC1|117531|transmembrane channel-like 1
hg18_v1_chr17_-_64462976_64463127	0.158222	MSX1,2.p2	BC130280|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8	BC143971|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8	BC143972|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8	AK304286|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8	BC010392|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8	AB020629|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8	BC047765|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8	BC094689|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8	AK304360|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8	AK295876|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8	BC037309|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8	BC024003|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8	NM_007168|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8
hg18_v1_chr2_+_162908828_162908860	0.157606	MSX1,2.p2	NM_012198|GCA|25801|grancalcin, EF-hand calcium binding protein
hg18_v1_chr7_-_99555399_99555416	0.156243	MSX1,2.p2	AK300005|TAF6|6878|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa	NM_001190415|TAF6|6878|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa
hg18_v1_chr9_-_34652629_34652688	0.150159	MSX1,2.p2	AF082393|CCL27|10850|chemokine (C-C motif) ligand 27	BC148263|CCL27|10850|chemokine (C-C motif) ligand 27	AJ243542|CCL27|10850|chemokine (C-C motif) ligand 27	AB010445|CCL27|10850|chemokine (C-C motif) ligand 27	NM_006664|CCL27|10850|chemokine (C-C motif) ligand 27
hg18_v1_chr11_-_123414917_123414917	0.147991	MSX1,2.p2	NM_001004463|OR10G7|390265|olfactory receptor, family 10, subfamily G, member 7
hg18_v1_chr10_-_119124727_119125016	0.143939	MSX1,2.p2	BC012186|PDZD8|118987|PDZ domain containing 8	BC028375|PDZD8|118987|PDZ domain containing 8	NM_173791|PDZD8|118987|PDZ domain containing 8	AK091746|PDZD8|118987|PDZ domain containing 8	BC033019|PDZD8|118987|PDZ domain containing 8
hg18_v1_chr4_-_189263395_189263401	0.143362	MSX1,2.p2	BC111959|TRIML2|205860|tripartite motif family-like 2	BC111961|TRIML2|205860|tripartite motif family-like 2	BC143709|TRIML2|205860|tripartite motif family-like 2	AK098667|TRIML2|205860|tripartite motif family-like 2	NM_173553|TRIML2|205860|tripartite motif family-like 2
hg18_v1_chr3_+_8518539_8518624	0.139919	MSX1,2.p2	AK294455|LMCD1|29995|LIM and cysteine-rich domains 1	AK293849|LMCD1|29995|LIM and cysteine-rich domains 1	AF216709|LMCD1|29995|LIM and cysteine-rich domains 1	DQ891747|LMCD1|29995|LIM and cysteine-rich domains 1	DQ894926|LMCD1|29995|LIM and cysteine-rich domains 1
hg18_v1_chr1_+_22852268_22852352	0.139437	MSX1,2.p2	NM_000491|C1QB|713|complement component 1, q subcomponent, B chain	CR595684|C1QB|713|complement component 1, q subcomponent, B chain	CR603615|C1QB|713|complement component 1, q subcomponent, B chain	BC008983|C1QB|713|complement component 1, q subcomponent, B chain
hg18_v1_chr10_-_32707549_32707737	0.136232	MSX1,2.p2	AF286905|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)	AK309309|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)	AK299676|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)
hg18_v1_chr10_+_114123828_114123959	0.136051	MSX1,2.p2	NM_203379|ACSL5|51703|acyl-CoA synthetase long-chain family member 5
hg18_v1_chr5_+_140509803_140510022	0.134448	MSX1,2.p2	AK299661|PCDHB6|56130|protocadherin beta 6	AK313482|PCDHB6|56130|protocadherin beta 6	AF152499|PCDHB6|56130|protocadherin beta 6	AF217752|PCDHB6|56130|protocadherin beta 6	NM_018939|PCDHB6|56130|protocadherin beta 6
hg18_v1_chr1_-_19089971_19089971	0.134431	MSX1,2.p2	AK294552|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1	NM_001161504|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1
hg18_v1_chr1_+_118273887_118273916	0.132825	MSX1,2.p2	NM_006784|WDR3|10885|WD repeat domain 3	AK292438|WDR3|10885|WD repeat domain 3	AF083217|WDR3|10885|WD repeat domain 3
hg18_v1_chr17_-_61655915_61656017	0.132028	MSX1,2.p2	CR595640|APOH|350|apolipoprotein H (beta-2-glycoprotein I)	DQ891362|APOH|350|apolipoprotein H (beta-2-glycoprotein I)	DQ894542|APOH|350|apolipoprotein H (beta-2-glycoprotein I)	S80305|APOH|350|apolipoprotein H (beta-2-glycoprotein I)	AK313838|APOH|350|apolipoprotein H (beta-2-glycoprotein I)	CR591542|APOH|350|apolipoprotein H (beta-2-glycoprotein I)	BC020703|APOH|350|apolipoprotein H (beta-2-glycoprotein I)	X58100|APOH|350|apolipoprotein H (beta-2-glycoprotein I)	AK298416|APOH|350|apolipoprotein H (beta-2-glycoprotein I)	BC026283|APOH|350|apolipoprotein H (beta-2-glycoprotein I)	X53595|APOH|350|apolipoprotein H (beta-2-glycoprotein I)	X57847|APOH|350|apolipoprotein H (beta-2-glycoprotein I)	M62839|APOH|350|apolipoprotein H (beta-2-glycoprotein I)	NM_000042|APOH|350|apolipoprotein H (beta-2-glycoprotein I)
hg18_v1_chr21_+_39117064_39117101	0.131408	MSX1,2.p2	CR608636|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)
hg18_v1_chr5_+_149977398_149977398	0.131189	MSX1,2.p2	AK127049|SYNPO|11346|synaptopodin	NM_001166209|SYNPO|11346|synaptopodin
hg18_v1_chrX_-_129347101_129347191	0.129034	MSX1,2.p2	AY288416|GPR119|139760|G protein-coupled receptor 119	BC101166|GPR119|139760|G protein-coupled receptor 119	BC101167|GPR119|139760|G protein-coupled receptor 119	BC101168|GPR119|139760|G protein-coupled receptor 119	BC095502|GPR119|139760|G protein-coupled receptor 119	BC126179|GPR119|139760|G protein-coupled receptor 119	BC126181|GPR119|139760|G protein-coupled receptor 119	NM_178471|GPR119|139760|G protein-coupled receptor 119
hg18_v1_chr19_+_54068300_54068302	0.128578	MSX1,2.p2	DQ891855|PPP1R15A|23645|protein phosphatase 1, regulatory (inhibitor) subunit 15A	EU176641|PPP1R15A|23645|protein phosphatase 1, regulatory (inhibitor) subunit 15A	CR457259|PPP1R15A|23645|protein phosphatase 1, regulatory (inhibitor) subunit 15A
hg18_v1_chr17_+_7683958_7683959	0.127589	MSX1,2.p2	AB002344|KDM6B|23135|lysine (K)-specific demethylase 6B	NM_001080424|KDM6B|23135|lysine (K)-specific demethylase 6B
hg18_v1_chr6_+_64289585_64289643	0.12746	MSX1,2.p2	CR749458|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1
hg18_v1_chr21_-_26294332_26294369	0.126063	MSX1,2.p2	X06981|APP|351|amyloid beta (A4) precursor protein	X06982|APP|351|amyloid beta (A4) precursor protein
hg18_v1_chr14_+_22375656_22375697	0.125965	MSX1,2.p2	BC039581|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)
hg18_v1_chr3_-_188870799_188870894	0.125711	MSX1,2.p2	BC032625|SST|6750|somatostatin	AK312177|SST|6750|somatostatin	NM_001048|SST|6750|somatostatin
hg18_v1_chr11_-_55460451_55460451	0.12536	MSX1,2.p2	BC069093|OR5I1|10798|olfactory receptor, family 5, subfamily I, member 1	NM_006637|OR5I1|10798|olfactory receptor, family 5, subfamily I, member 1
hg18_v1_chr3_-_71262405_71262422	0.12464	MSX1,2.p2	AK027264|FOXP1|27086|forkhead box P1
hg18_v1_chr1_-_240679380_240679406	0.123731	MSX1,2.p2	AK091691|PLD5|200150|phospholipase D family, member 5	AK307857|PLD5|200150|phospholipase D family, member 5	AK295421|PLD5|200150|phospholipase D family, member 5	AY461578|PLD5|200150|phospholipase D family, member 5	NM_001195811|PLD5|200150|phospholipase D family, member 5	NM_001195812|PLD5|200150|phospholipase D family, member 5
hg18_v1_chr18_-_5286013_5286055	0.122744	MSX1,2.p2	AK313236|ZFP161|7541|zinc finger protein 161 homolog (mouse)	BC057282|ZFP161|7541|zinc finger protein 161 homolog (mouse)	NM_001143823|ZFP161|7541|zinc finger protein 161 homolog (mouse)	NM_003409|ZFP161|7541|zinc finger protein 161 homolog (mouse)
hg18_v1_chr6_+_33365445_33365527	0.122203	MSX1,2.p2	BC039033|PFDN6|10471|prefoldin subunit 6	BC059783|PFDN6|10471|prefoldin subunit 6	CR609151|PFDN6|10471|prefoldin subunit 6
hg18_v1_chrX_-_131089552_131089730	0.121995	MSX1,2.p2	FJ717411|FRMD7|90167|FERM domain containing 7	BC114371|FRMD7|90167|FERM domain containing 7	AK125336|FRMD7|90167|FERM domain containing 7	NM_194277|FRMD7|90167|FERM domain containing 7
hg18_v1_chr9_-_85773899_85773933	0.117639	MSX1,2.p2	BC013220|HNRNPK|3190|heterogeneous nuclear ribonucleoprotein K
hg18_v1_chr2_-_210726539_210726633	0.113487	MSX1,2.p2	AK074441|C2orf67|151050|chromosome 2 open reading frame 67	BC070141|C2orf67|151050|chromosome 2 open reading frame 67
hg18_v1_chr9_+_115970599_115970708	0.113265	MSX1,2.p2	AB058773|COL27A1|85301|collagen, type XXVII, alpha 1
hg18_v1_chrX_+_119621933_119622010	0.112329	MSX1,2.p2	BC095461|MCTS1|28985|malignant T cell amplified sequence 1
hg18_v1_chr6_-_119512035_119512056	0.110497	MSX1,2.p2	BX538186|FAM184A|79632|family with sequence similarity 184, member A	AK091682|FAM184A|79632|family with sequence similarity 184, member A	NM_001100411|FAM184A|79632|family with sequence similarity 184, member A
hg18_v1_chr16_+_64958025_64958043	0.108299	MSX1,2.p2	NM_001795|CDH5|1003|cadherin 5, type 2 (vascular endothelium)
hg18_v1_chr2_+_176695658_176695772	0.107483	MSX1,2.p2	BC044855|HOXD9|3235|homeobox D9	NM_014213|HOXD9|3235|homeobox D9	X59372|HOXD9|3235|homeobox D9
hg18_v1_chr8_-_72437020_72437039	0.106888	MSX1,2.p2	AJ000098|EYA1|2138|eyes absent homolog 1 (Drosophila)	NM_000503|EYA1|2138|eyes absent homolog 1 (Drosophila)
hg18_v1_chr2_-_239987629_239987641	0.105627	MSX1,2.p2	BC039904|HDAC4|9759|histone deacetylase 4
hg18_v1_chr3_-_99236520_99236520	0.105333	MSX1,2.p2	NM_001105580|GABRR3|200959|gamma-aminobutyric acid (GABA) receptor, rho 3
hg18_v1_chr21_+_42492867_42492990	0.100306	MSX1,2.p2	AF323660|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1	NM_207627|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1	AF323661|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1	NM_207628|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1
hg18_v1_chr1_-_100003936_100003936	0.0991714	MSX1,2.p2	AK131302|FRRS1|391059|ferric-chelate reductase 1	NM_001013660|FRRS1|391059|ferric-chelate reductase 1
hg18_v1_chr9_+_129870268_129870340	0.098941	MSX1,2.p2	AK290991|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25	NM_001006641|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25
hg18_v1_chr12_-_44877769_44877868	0.0946555	MSX1,2.p2	CR595454|SLC38A1|81539|solute carrier family 38, member 1
hg18_v1_chr14_-_23653965_23654083	0.0945658	MSX1,2.p2	BX161381|NRL|4901|neural retina leucine zipper	CR593888|NRL|4901|neural retina leucine zipper
hg18_v1_chr21_-_30720100_30720114	0.0943688	MSX1,2.p2	BC103965|KRTAP13-3|337960|keratin associated protein 13-3	NM_181622|KRTAP13-3|337960|keratin associated protein 13-3	AB096940|KRTAP13-3|337960|keratin associated protein 13-3
hg18_v1_chr5_-_138238891_138238934	0.0935962	MSX1,2.p2	AK309790|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2	AB007876|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2	BC028172|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2	AK291064|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2	AK297332|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa
hg18_v1_chr12_+_49634048_49634048	0.0933242	MSX1,2.p2	NM_001109619|HIGD1C|613227|HIG1 hypoxia inducible domain family, member 1C
hg18_v1_chr2_+_207115060_207115102	0.0931498	MSX1,2.p2	AK129906|ADAM23|8745|ADAM metallopeptidase domain 23
hg18_v1_chr4_+_71372422_71372527	0.0915994	MSX1,2.p2	NM_152291|MUC7|4589|mucin 7, secreted	AK093828|MUC7|4589|mucin 7, secreted	AK312855|MUC7|4589|mucin 7, secreted	BX647190|MUC7|4589|mucin 7, secreted	BC025688|MUC7|4589|mucin 7, secreted	L13283|MUC7|4589|mucin 7, secreted
hg18_v1_chr1_-_200182090_200182313	0.0914921	MSX1,2.p2	AK126474|LMOD1|25802|leiomodin 1 (smooth muscle)	BC001755|LMOD1|25802|leiomodin 1 (smooth muscle)	X54162|LMOD1|25802|leiomodin 1 (smooth muscle)	AK304852|LMOD1|25802|leiomodin 1 (smooth muscle)	BC080187|LMOD1|25802|leiomodin 1 (smooth muscle)	AK295824|LMOD1|25802|leiomodin 1 (smooth muscle)
hg18_v1_chr13_+_57103789_57103789	0.0908545	MSX1,2.p2	NM_001040429|PCDH17|27253|protocadherin 17
hg18_v1_chr4_+_110968594_110968607	0.0878735	MSX1,2.p2	AF012270|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog	NM_006583|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog	BC128120|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog	BC128121|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog	BC128401|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog
hg18_v1_chr7_+_30704125_30704171	0.0875604	MSX1,2.p2	AK309519|INMT|11185|indolethylamine N-methyltransferase
hg18_v1_chr6_+_131613196_131613400	0.0866744	MSX1,2.p2	NM_004842|AKAP7|9465|A kinase (PRKA) anchor protein 7	NM_138633|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC118601|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC118606|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC128398|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC128399|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC141926|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC141927|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC094732|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC073847|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC063499|AKAP7|9465|A kinase (PRKA) anchor protein 7	AK290271|AKAP7|9465|A kinase (PRKA) anchor protein 7	AK311820|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC110897|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC016927|AKAP7|9465|A kinase (PRKA) anchor protein 7	AF161075|AKAP7|9465|A kinase (PRKA) anchor protein 7	AB451273|AKAP7|9465|A kinase (PRKA) anchor protein 7	AB451400|AKAP7|9465|A kinase (PRKA) anchor protein 7
hg18_v1_chrX_+_119621771_119621862	0.0864064	MSX1,2.p2	NM_014060|MCTS1|28985|malignant T cell amplified sequence 1	AK311993|MCTS1|28985|malignant T cell amplified sequence 1	AB034206|MCTS1|28985|malignant T cell amplified sequence 1
hg18_v1_chr7_-_104696678_104696761	0.0851021	MSX1,2.p2	BC035214|SRPK2|6733|SRSF protein kinase 2	U88666|SRPK2|6733|SRSF protein kinase 2	NM_182691|SRPK2|6733|SRSF protein kinase 2
hg18_v1_chr17_-_36403910_36403963	0.0844839	MSX1,2.p2	AJ406933|KRTAP3-3|85293|keratin associated protein 3-3	BC069099|KRTAP3-3|85293|keratin associated protein 3-3	BC069448|KRTAP3-3|85293|keratin associated protein 3-3	NM_033185|KRTAP3-3|85293|keratin associated protein 3-3	BC093845|KRTAP3-3|85293|keratin associated protein 3-3	BC093847|KRTAP3-3|85293|keratin associated protein 3-3
hg18_v1_chr4_+_71372263_71372263	0.0815143	MSX1,2.p2	NM_001145007|MUC7|4589|mucin 7, secreted
hg18_v1_chr6_-_55848346_55848351	0.0799589	MSX1,2.p2	AK291559|BMP5|653|bone morphogenetic protein 5
hg18_v1_chr10_-_121592020_121592087	0.0780044	MSX1,2.p2	BC000935|MCMBP|79892|minichromosome maintenance complex binding protein
hg18_v1_chrX_+_16874651_16875056	0.0767915	MSX1,2.p2	AF010233|REPS2|9185|RALBP1 associated Eps domain containing 2	NM_001080975|REPS2|9185|RALBP1 associated Eps domain containing 2	NM_004726|REPS2|9185|RALBP1 associated Eps domain containing 2	AF511533|REPS2|9185|RALBP1 associated Eps domain containing 2	AF512951|REPS2|9185|RALBP1 associated Eps domain containing 2
hg18_v1_chr14_+_100365390_100365443	0.0766196	MSX1,2.p2	CR610233|MEG3|55384|maternally expressed 3 (non-protein coding)	CR609760|MEG3|55384|maternally expressed 3 (non-protein coding)
hg18_v1_chr2_+_137464931_137464931	0.0764082	MSX1,2.p2	NM_001080427|THSD7B|80731|thrombospondin, type I, domain containing 7B
hg18_v1_chr6_+_139136349_139136621	0.0744288	MSX1,2.p2	AY167571|CCDC28A|25901|coiled-coil domain containing 28A	CR598704|CCDC28A|25901|coiled-coil domain containing 28A	NM_015439|CCDC28A|25901|coiled-coil domain containing 28A	BC108717|CCDC28A|25901|coiled-coil domain containing 28A	AK300672|CCDC28A|25901|coiled-coil domain containing 28A	AL050197|CCDC28A|25901|coiled-coil domain containing 28A	AJ420568|CCDC28A|25901|coiled-coil domain containing 28A	CR626300|CCDC28A|25901|coiled-coil domain containing 28A	BC000758|CCDC28A|25901|coiled-coil domain containing 28A	BC004464|CCDC28A|25901|coiled-coil domain containing 28A	BC080566|CCDC28A|25901|coiled-coil domain containing 28A	BC013019|CCDC28A|25901|coiled-coil domain containing 28A	CR612663|CCDC28A|25901|coiled-coil domain containing 28A	CR626831|CCDC28A|25901|coiled-coil domain containing 28A
hg18_v1_chrX_+_99726445_99726670	0.0735649	MSX1,2.p2	NM_022144|TNMD|64102|tenomodulin	AF191770|TNMD|64102|tenomodulin	BC034030|TNMD|64102|tenomodulin	AF291656|TNMD|64102|tenomodulin	AF234259|TNMD|64102|tenomodulin	AY358706|TNMD|64102|tenomodulin	AB055421|TNMD|64102|tenomodulin
hg18_v1_chr1_+_144198658_144198802	0.0723274	MSX1,2.p2	CR627381|LIX1L|128077|Lix1 homolog (mouse)-like
hg18_v1_chr6_-_30633349_30633349	0.068141	MSX1,2.p2	NM_005275|GNL1|2794|guanine nucleotide binding protein-like 1
hg18_v1_chr3_+_50119261_50119280	0.0673913	MSX1,2.p2	CR618011|RBM5|10181|RNA binding motif protein 5
hg18_v1_chr3_+_9919295_9919352	0.0672769	MSX1,2.p2	NM_153483|IL17RE|132014|interleukin 17 receptor E	BC035478|IL17RE|132014|interleukin 17 receptor E	BC137077|IL17RE|132014|interleukin 17 receptor E	BC137078|IL17RE|132014|interleukin 17 receptor E
hg18_v1_chr20_+_18070867_18070963	0.0657331	MSX1,2.p2	NM_020536|CSRP2BP|57325|CSRP2 binding protein	BC007537|CSRP2BP|57325|CSRP2 binding protein
hg18_v1_chr16_+_33168191_33168191	0.0636683	MSX1,2.p2	NM_001099687|TP53TG3B|729355|TP53 target 3B
hg18_v1_chrX_+_103181171_103181171	0.0600108	MSX1,2.p2	AK093522|H2BFM|286436|H2B histone family, member M	NM_001164416|H2BFM|286436|H2B histone family, member M
hg18_v1_chr4_-_70547962_70548067	0.0592512	MSX1,2.p2	BC156239|UGT2A1|10941|UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus	BC157012|UGT2A1|10941|UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus	AJ006054|UGT2A1|10941|UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus	NM_006798|UGT2A1|10941|UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus	BC142640|UGT2A1|10941|UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus
hg18_v1_chr3_-_74652952_74653032	0.058585	MSX1,2.p2	BC150608|CNTN3|5067|contactin 3 (plasmacytoma associated)	NM_020872|CNTN3|5067|contactin 3 (plasmacytoma associated)
hg18_v1_chr2_-_77602843_77603009	0.0573516	MSX1,2.p2	BC098267|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4	BC098301|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4	BC099738|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4	BC110058|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4	AY358324|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4	AK122612|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4	AK126961|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4	NM_001134745|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4	NM_024993|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4
hg18_v1_chr11_+_64950402_64950455	0.0573128	MSX1,2.p2	
hg18_v1_chr11_-_72141064_72141164	0.055132	MSX1,2.p2	AY553630|ARAP1|116985|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	NM_001040118|ARAP1|116985|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
hg18_v1_chrX_+_153310171_153310217	0.0542896	MSX1,2.p2	NM_001183|ATP6AP1|537|ATPase, H+ transporting, lysosomal accessory protein 1	AK289452|ATP6AP1|537|ATPase, H+ transporting, lysosomal accessory protein 1	AK075284|ATP6AP1|537|ATPase, H+ transporting, lysosomal accessory protein 1	AK301603|ATP6AP1|537|ATPase, H+ transporting, lysosomal accessory protein 1	BC000724|ATP6AP1|537|ATPase, H+ transporting, lysosomal accessory protein 1	AK130616|ATP6AP1|537|ATPase, H+ transporting, lysosomal accessory protein 1
hg18_v1_chrX_+_153310219_153310244	0.0541171	MSX1,2.p2	CR625568|ATP6AP1|537|ATPase, H+ transporting, lysosomal accessory protein 1	AM392567|ATP6AP1|537|ATPase, H+ transporting, lysosomal accessory protein 1	AM393312|ATP6AP1|537|ATPase, H+ transporting, lysosomal accessory protein 1	AM393872|ATP6AP1|537|ATPase, H+ transporting, lysosomal accessory protein 1	DQ892139|ATP6AP1|537|ATPase, H+ transporting, lysosomal accessory protein 1	DQ895333|ATP6AP1|537|ATPase, H+ transporting, lysosomal accessory protein 1	CR592659|ATP6AP1|537|ATPase, H+ transporting, lysosomal accessory protein 1	CR615694|ATP6AP1|537|ATPase, H+ transporting, lysosomal accessory protein 1	AK090462|ATP6AP1|537|ATPase, H+ transporting, lysosomal accessory protein 1	AL136851|ATP6AP1|537|ATPase, H+ transporting, lysosomal accessory protein 1
hg18_v1_chr1_+_31542413_31542432	0.0533332	MSX1,2.p2	AK022506|ZCCHC17|51538|zinc finger, CCHC domain containing 17	NM_016505|ZCCHC17|51538|zinc finger, CCHC domain containing 17
hg18_v1_chr1_+_168767864_168767990	0.052461	MSX1,2.p2	AK308339|GORAB|92344|golgin, RAB6-interacting	NM_001146039|GORAB|92344|golgin, RAB6-interacting	NM_152281|GORAB|92344|golgin, RAB6-interacting	AK021814|GORAB|92344|golgin, RAB6-interacting	BC064945|GORAB|92344|golgin, RAB6-interacting	BC047476|GORAB|92344|golgin, RAB6-interacting	AK057661|GORAB|92344|golgin, RAB6-interacting
hg18_v1_chr19_-_51109875_51109967	0.0512036	MSX1,2.p2	BC042883|NANOS2|339345|nanos homolog 2 (Drosophila)	NM_001029861|NANOS2|339345|nanos homolog 2 (Drosophila)	BC117484|NANOS2|339345|nanos homolog 2 (Drosophila)	BC117486|NANOS2|339345|nanos homolog 2 (Drosophila)
hg18_v1_chrX_+_154097894_154097968	0.0487313	MSX1,2.p2	NM_003372|VBP1|7411|von Hippel-Lindau binding protein 1	CR625553|VBP1|7411|von Hippel-Lindau binding protein 1	BC009570|VBP1|7411|von Hippel-Lindau binding protein 1	CR609299|VBP1|7411|von Hippel-Lindau binding protein 1	AK313420|VBP1|7411|von Hippel-Lindau binding protein 1	CR624898|VBP1|7411|von Hippel-Lindau binding protein 1	CR616139|VBP1|7411|von Hippel-Lindau binding protein 1	BC046094|VBP1|7411|von Hippel-Lindau binding protein 1	Y17394|VBP1|7411|von Hippel-Lindau binding protein 1	BC040002|VBP1|7411|von Hippel-Lindau binding protein 1	CR623613|VBP1|7411|von Hippel-Lindau binding protein 1	CR618821|VBP1|7411|von Hippel-Lindau binding protein 1	BT019604|VBP1|7411|von Hippel-Lindau binding protein 1	CR596441|VBP1|7411|von Hippel-Lindau binding protein 1	CR595254|VBP1|7411|von Hippel-Lindau binding protein 1	CR604493|VBP1|7411|von Hippel-Lindau binding protein 1	CR608323|VBP1|7411|von Hippel-Lindau binding protein 1	CR616685|VBP1|7411|von Hippel-Lindau binding protein 1	CR611663|VBP1|7411|von Hippel-Lindau binding protein 1	CR600706|VBP1|7411|von Hippel-Lindau binding protein 1	CR612569|VBP1|7411|von Hippel-Lindau binding protein 1
hg18_v1_chr7_+_143437539_143437608	0.0486155	MSX1,2.p2	BC136742|OR2A2|442361|olfactory receptor, family 2, subfamily A, member 2	NM_001005480|OR2A2|442361|olfactory receptor, family 2, subfamily A, member 2
hg18_v1_chr16_+_64958086_64958120	0.0484936	MSX1,2.p2	AK300461|CDH5|1003|cadherin 5, type 2 (vascular endothelium)	X59796|CDH5|1003|cadherin 5, type 2 (vascular endothelium)	AK300299|CDH5|1003|cadherin 5, type 2 (vascular endothelium)	AB209908|CDH5|1003|cadherin 5, type 2 (vascular endothelium)	AB035304|CDH5|1003|cadherin 5, type 2 (vascular endothelium)	BC096363|CDH5|1003|cadherin 5, type 2 (vascular endothelium)	BC096364|CDH5|1003|cadherin 5, type 2 (vascular endothelium)	BC096365|CDH5|1003|cadherin 5, type 2 (vascular endothelium)	BC117520|CDH5|1003|cadherin 5, type 2 (vascular endothelium)
hg18_v1_chr12_-_14024187_14024319	0.0479553	MSX1,2.p2	BC113618|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B	BC113620|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B	NM_000834|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B	U88963|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B	U90278|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B	U11287|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B
hg18_v1_chr1_-_165789586_165789628	0.0477197	MSX1,2.p2	CR609800|CREG1|8804|cellular repressor of E1A-stimulated genes 1	CR623745|CREG1|8804|cellular repressor of E1A-stimulated genes 1	CR626333|CREG1|8804|cellular repressor of E1A-stimulated genes 1	DQ891131|CREG1|8804|cellular repressor of E1A-stimulated genes 1	DQ894310|CREG1|8804|cellular repressor of E1A-stimulated genes 1	CR616545|CREG1|8804|cellular repressor of E1A-stimulated genes 1	AY359071|CREG1|8804|cellular repressor of E1A-stimulated genes 1	CR611446|CREG1|8804|cellular repressor of E1A-stimulated genes 1	BC006786|CREG1|8804|cellular repressor of E1A-stimulated genes 1	BC008628|CREG1|8804|cellular repressor of E1A-stimulated genes 1	CR607435|CREG1|8804|cellular repressor of E1A-stimulated genes 1	AK130006|CREG1|8804|cellular repressor of E1A-stimulated genes 1	CR625312|CREG1|8804|cellular repressor of E1A-stimulated genes 1	AK315497|CREG1|8804|cellular repressor of E1A-stimulated genes 1	AK075375|CREG1|8804|cellular repressor of E1A-stimulated genes 1	AK095456|CREG1|8804|cellular repressor of E1A-stimulated genes 1	AF084523|CREG1|8804|cellular repressor of E1A-stimulated genes 1	CR622061|CREG1|8804|cellular repressor of E1A-stimulated genes 1
hg18_v1_chr21_+_38550533_38550533	0.0469605	MSX1,2.p2	BC013327|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15	NM_002243|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15
hg18_v1_chr6_-_123999640_123999844	0.045959	MSX1,2.p2	NM_006073|TRDN|10345|triadin	U18985|TRDN|10345|triadin	BC139910|TRDN|10345|triadin	AK291867|TRDN|10345|triadin	BC012590|TRDN|10345|triadin	BC029393|TRDN|10345|triadin	BC057222|TRDN|10345|triadin	BC070290|TRDN|10345|triadin	AJ489257|TRDN|10345|triadin	AK307619|TRDN|10345|triadin
hg18_v1_chr5_+_86712376_86712511	0.0454513	MSX1,2.p2	
hg18_v1_chrX_-_110542040_110542115	0.0445494	MSX1,2.p2	AF040254|DCX|1641|doublecortin	AF040255|DCX|1641|doublecortin	BC027925|DCX|1641|doublecortin	AK290455|DCX|1641|doublecortin	AK299822|DCX|1641|doublecortin	NM_178151|DCX|1641|doublecortin	NM_001195553|DCX|1641|doublecortin	NM_178152|DCX|1641|doublecortin	NM_178153|DCX|1641|doublecortin
hg18_v1_chr3_+_120375053_120375156	0.0444839	MSX1,2.p2	AK303924|UPK1B|7348|uroplakin 1B	AK313787|UPK1B|7348|uroplakin 1B	NM_006952|UPK1B|7348|uroplakin 1B	CR624397|UPK1B|7348|uroplakin 1B	AB002155|UPK1B|7348|uroplakin 1B
hg18_v1_chr12_-_21545751_21545869	0.0424206	MSX1,2.p2	BC001052|RECQL|5965|RecQ protein-like (DNA helicase Q1-like)	AK291627|RECQL|5965|RecQ protein-like (DNA helicase Q1-like)	NM_002907|RECQL|5965|RecQ protein-like (DNA helicase Q1-like)	NM_032941|RECQL|5965|RecQ protein-like (DNA helicase Q1-like)
hg18_v1_chr6_-_49862858_49863011	0.0420206	MSX1,2.p2	BC038843|PGK2|5232|phosphoglycerate kinase 2	AK312770|PGK2|5232|phosphoglycerate kinase 2	NM_138733|PGK2|5232|phosphoglycerate kinase 2
hg18_v1_chr9_+_124416768_124416837	0.0400644	MSX1,2.p2	BC140713|OR1Q1|158131|olfactory receptor, family 1, subfamily Q, member 1	NM_012364|OR1Q1|158131|olfactory receptor, family 1, subfamily Q, member 1
hg18_v1_chr1_+_32438788_32438839	0.0381655	MSX1,2.p2	AK092702|CCDC28B|79140|coiled-coil domain containing 28B	NM_024296|CCDC28B|79140|coiled-coil domain containing 28B	AK225113|CCDC28B|79140|coiled-coil domain containing 28B	BC002462|CCDC28B|79140|coiled-coil domain containing 28B	BC022848|CCDC28B|79140|coiled-coil domain containing 28B
hg18_v1_chr12_+_21545965_21546006	0.0361736	MSX1,2.p2	NM_016072|GOLT1B|51026|golgi transport 1B	AK311331|GOLT1B|51026|golgi transport 1B	AF068292|GOLT1B|51026|golgi transport 1B	AK309736|GOLT1B|51026|golgi transport 1B
hg18_v1_chr5_-_36337756_36337767	0.0359087	MSX1,2.p2	BC017951|RANBP3L|202151|RAN binding protein 3-like	AK058151|RANBP3L|202151|RAN binding protein 3-like	AK302947|RANBP3L|202151|RAN binding protein 3-like	BC047660|RANBP3L|202151|RAN binding protein 3-like	NM_001161429|RANBP3L|202151|RAN binding protein 3-like	NM_145000|RANBP3L|202151|RAN binding protein 3-like
hg18_v1_chr14_-_72995012_72995029	0.0355453	MSX1,2.p2	BX248781|NUMB|8650|numb homolog (Drosophila)
hg18_v1_chr7_+_17349425_17349438	0.0333439	MSX1,2.p2	BC021696|AHR|196|aryl hydrocarbon receptor
hg18_v1_chr12_+_54172413_54172413	0.0324589	MSX1,2.p2	NM_001005519|OR6C68|403284|olfactory receptor, family 6, subfamily C, member 68
hg18_v1_chr16_+_64958060_64958063	0.0311295	MSX1,2.p2	U84722|CDH5|1003|cadherin 5, type 2 (vascular endothelium)
hg18_v1_chr3_+_157321030_157321060	0.0297597	MSX1,2.p2	NM_172160|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1	L47665|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1	AK292693|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1	AK303287|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1
hg18_v1_chr6_-_55848317_55848333	0.0287614	MSX1,2.p2	M60314|BMP5|653|bone morphogenetic protein 5	BC027958|BMP5|653|bone morphogenetic protein 5	NM_021073|BMP5|653|bone morphogenetic protein 5
hg18_v1_chr8_+_76614757_76614781	0.0284904	MSX1,2.p2	BX571750|HNF4G|3174|hepatocyte nuclear factor 4, gamma	NM_004133|HNF4G|3174|hepatocyte nuclear factor 4, gamma	EU832451|HNF4G|3174|hepatocyte nuclear factor 4, gamma
hg18_v1_chr14_+_19458580_19458605	0.0266534	MSX1,2.p2	BC140947|OR4K5|79317|olfactory receptor, family 4, subfamily K, member 5	NM_001005483|OR4K5|79317|olfactory receptor, family 4, subfamily K, member 5
hg18_v1_chr1_+_151209751_151209764	0.0263551	MSX1,2.p2	NM_173080|SPRR4|163778|small proline-rich protein 4	BC112170|SPRR4|163778|small proline-rich protein 4	BC112172|SPRR4|163778|small proline-rich protein 4	BC069445|SPRR4|163778|small proline-rich protein 4	BC069549|SPRR4|163778|small proline-rich protein 4
hg18_v1_chr5_+_140757787_140757878	0.0234743	MSX1,2.p2	BC093877|PCDHGB5|56101|protocadherin gamma subfamily B, 5	BC093879|PCDHGB5|56101|protocadherin gamma subfamily B, 5	AF152334|PCDHGB5|56101|protocadherin gamma subfamily B, 5	AF152521|PCDHGB5|56101|protocadherin gamma subfamily B, 5	NM_018925|PCDHGB5|56101|protocadherin gamma subfamily B, 5	NM_032099|PCDHGB5|56101|protocadherin gamma subfamily B, 5
hg18_v1_chr2_+_233029076_233029153	0.0212119	MSX1,2.p2	AK313163|ALPI|248|alkaline phosphatase, intestinal	NM_001631|ALPI|248|alkaline phosphatase, intestinal	BC132678|ALPI|248|alkaline phosphatase, intestinal	M31008|ALPI|248|alkaline phosphatase, intestinal	M15694|ALPI|248|alkaline phosphatase, intestinal
hg18_v1_chr12_-_11030777_11030777	0.0211538	MSX1,2.p2	BC112100|TAS2R50|259296|taste receptor, type 2, member 50	NM_176890|TAS2R50|259296|taste receptor, type 2, member 50
hg18_v1_chr16_-_32596378_32596378	0.0202344	MSX1,2.p2	NM_001099687|TP53TG3B|729355|TP53 target 3B
hg18_v1_chr9_-_85784987_85785003	0.0196218	MSX1,2.p2	NM_031263|HNRNPK|3190|heterogeneous nuclear ribonucleoprotein K
hg18_v1_chr8_-_95556460_95556531	0.0165326	MSX1,2.p2	BC001965|RAD54B|25788|RAD54 homolog B (S. cerevisiae)	CR602319|RAD54B|25788|RAD54 homolog B (S. cerevisiae)	AF112481|RAD54B|25788|RAD54 homolog B (S. cerevisiae)	BC020668|RAD54B|25788|RAD54 homolog B (S. cerevisiae)	NM_012415|RAD54B|25788|RAD54 homolog B (S. cerevisiae)	AK290437|RAD54B|25788|RAD54 homolog B (S. cerevisiae)
hg18_v1_chr5_+_161210280_161210394	0.015991	MSX1,2.p2	NM_001127648|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1	DQ890915|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1
hg18_v1_chr1_+_54132447_54132471	0.0139284	MSX1,2.p2	AK290780|DIO1|1733|deiodinase, iodothyronine, type I	BC017955|DIO1|1733|deiodinase, iodothyronine, type I	BC107170|DIO1|1733|deiodinase, iodothyronine, type I	BC107171|DIO1|1733|deiodinase, iodothyronine, type I	NM_000792|DIO1|1733|deiodinase, iodothyronine, type I	NM_001039715|DIO1|1733|deiodinase, iodothyronine, type I	NM_001039716|DIO1|1733|deiodinase, iodothyronine, type I	NM_213593|DIO1|1733|deiodinase, iodothyronine, type I	FJ002243|DIO1|1733|deiodinase, iodothyronine, type I	FJ002244|DIO1|1733|deiodinase, iodothyronine, type I	AY560374|DIO1|1733|deiodinase, iodothyronine, type I	AY560375|DIO1|1733|deiodinase, iodothyronine, type I	AY560376|DIO1|1733|deiodinase, iodothyronine, type I	AY560377|DIO1|1733|deiodinase, iodothyronine, type I	AY560378|DIO1|1733|deiodinase, iodothyronine, type I	AY560379|DIO1|1733|deiodinase, iodothyronine, type I	AY560380|DIO1|1733|deiodinase, iodothyronine, type I	AY560381|DIO1|1733|deiodinase, iodothyronine, type I	AY560382|DIO1|1733|deiodinase, iodothyronine, type I	AY560383|DIO1|1733|deiodinase, iodothyronine, type I
hg18_v1_chr8_-_114518194_114518417	0.0126577	MSX1,2.p2	BX648252|CSMD3|114788|CUB and Sushi multiple domains 3	AY210419|CSMD3|114788|CUB and Sushi multiple domains 3	BC140003|CSMD3|114788|CUB and Sushi multiple domains 3	AB114604|CSMD3|114788|CUB and Sushi multiple domains 3	NM_052900|CSMD3|114788|CUB and Sushi multiple domains 3	NM_198123|CSMD3|114788|CUB and Sushi multiple domains 3
hg18_v1_chr16_+_52037186_52037193	0.0121398	MSX1,2.p2	BX537767|RBL2|5934|retinoblastoma-like 2 (p130)
hg18_v1_chr20_+_2224612_2224686	0.0120352	MSX1,2.p2	NM_003245|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)	AK298637|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)	AK299447|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)	AK308249|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)	AK290324|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)	AK291351|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)	AK315236|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)	L10386|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)	BC109075|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)	BC109076|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)
hg18_v1_chr3_+_129690735_129690768	0.0113529	MSX1,2.p2	
hg18_v1_chr11_+_91724909_91724909	0.0100308	MSX1,2.p2	NM_001008781|FAT3|120114|FAT tumor suppressor homolog 3 (Drosophila)
hg18_v1_chr11_-_40272239_40272239	0.00986848	MSX1,2.p2	AB046800|LRRC4C|57689|leucine rich repeat containing 4C	NM_020929|LRRC4C|57689|leucine rich repeat containing 4C
hg18_v1_chr7_+_136203938_136203955	0.00878921	MSX1,2.p2	AY034603|CHRM2|1129|cholinergic receptor, muscarinic 2	AY219704|CHRM2|1129|cholinergic receptor, muscarinic 2	NM_001006627|CHRM2|1129|cholinergic receptor, muscarinic 2	NM_001006630|CHRM2|1129|cholinergic receptor, muscarinic 2	AK290236|CHRM2|1129|cholinergic receptor, muscarinic 2	AL832585|CHRM2|1129|cholinergic receptor, muscarinic 2
hg18_v1_chr12_+_105602606_105602721	0.00863529	MSX1,2.p2	BC028582|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)	AF332192|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)	NM_032491|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)	AK315698|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)	BC030644|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)	DQ890831|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)	DQ893986|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)
hg18_v1_chr3_-_194579207_194579325	0.00782821	MSX1,2.p2	AY823163|ATP13A5|344905|ATPase type 13A5	NM_198505|ATP13A5|344905|ATPase type 13A5	AK122613|ATP13A5|344905|ATPase type 13A5
hg18_v1_chr20_+_19985289_19985351	0.00733543	MSX1,2.p2	NM_001167816|C20orf26|26074|chromosome 20 open reading frame 26	AL117439|C20orf26|26074|chromosome 20 open reading frame 26
hg18_v1_chr11_-_13474101_13474142	0.00642844	MSX1,2.p2	V00597|PTH|5741|parathyroid hormone	BC096142|PTH|5741|parathyroid hormone	BC096143|PTH|5741|parathyroid hormone	BC096144|PTH|5741|parathyroid hormone	BC096145|PTH|5741|parathyroid hormone	NM_000315|PTH|5741|parathyroid hormone
hg18_v1_chr5_+_140714951_140714951	0.00615555	MSX1,2.p2	AF152324|PCDHGA4|56111|protocadherin gamma subfamily A, 4	AF152511|PCDHGA4|56111|protocadherin gamma subfamily A, 4	NM_018917|PCDHGA4|56111|protocadherin gamma subfamily A, 4	NM_032053|PCDHGA4|56111|protocadherin gamma subfamily A, 4
hg18_v1_chrX_-_100920493_100920637	0.00476883	MSX1,2.p2	BC018009|GK|2710|glycerol kinase
hg18_v1_chr2_-_96238234_96238288	0.00464279	MSX1,2.p2	AF270647|STARD7|56910|StAR-related lipid transfer (START) domain containing 7	BC012774|STARD7|56910|StAR-related lipid transfer (START) domain containing 7	BC014076|STARD7|56910|StAR-related lipid transfer (START) domain containing 7	BC012793|STARD7|56910|StAR-related lipid transfer (START) domain containing 7	BC007894|STARD7|56910|StAR-related lipid transfer (START) domain containing 7	BC009998|STARD7|56910|StAR-related lipid transfer (START) domain containing 7	BC032106|STARD7|56910|StAR-related lipid transfer (START) domain containing 7	BC014274|STARD7|56910|StAR-related lipid transfer (START) domain containing 7	BC003028|STARD7|56910|StAR-related lipid transfer (START) domain containing 7	BC008894|STARD7|56910|StAR-related lipid transfer (START) domain containing 7	BC013279|STARD7|56910|StAR-related lipid transfer (START) domain containing 7
hg18_v1_chr3_+_110338250_110338256	0.00369899	MSX1,2.p2	AK026416|FLJ22763|401081|hypothetical LOC401081
hg18_v1_chr1_+_103999663_103999664	0.0036279	MSX1,2.p2	NM_001008221|AMY1A|276|amylase, alpha 1A (salivary)	AK292341|AMY1A|276|amylase, alpha 1A (salivary)
hg18_v1_chr6_-_150109324_150109395	0.00335284	MSX1,2.p2	AM392678|NUP43|348995|nucleoporin 43kDa	BC065028|NUP43|348995|nucleoporin 43kDa	AK304244|NUP43|348995|nucleoporin 43kDa	AF514997|NUP43|348995|nucleoporin 43kDa	AK301027|NUP43|348995|nucleoporin 43kDa	BX647097|NUP43|348995|nucleoporin 43kDa	AK074311|NUP43|348995|nucleoporin 43kDa	AK095994|NUP43|348995|nucleoporin 43kDa	NM_198887|NUP43|348995|nucleoporin 43kDa	AK304505|NUP43|348995|nucleoporin 43kDa
hg18_v1_chr17_+_18027538_18027591	0.00271367	MSX1,2.p2	NM_017758|ALKBH5|54890|alkB, alkylation repair homolog 5 (E. coli)
hg18_v1_chr1_+_110683580_110683580	0.00262439	MSX1,2.p2	BC047479|RBM15|64783|RNA binding motif protein 15
hg18_v1_chr1_+_195179533_195179632	0.00204922	MSX1,2.p2	BC022283|CFHR2|3080|complement factor H-related 2	NM_005666|CFHR2|3080|complement factor H-related 2	X64877|CFHR2|3080|complement factor H-related 2	DQ891405|CFHR2|3080|complement factor H-related 2	DQ894582|CFHR2|3080|complement factor H-related 2
hg18_v1_chr10_+_95507555_95507717	0.00181948	MSX1,2.p2	NM_005097|LGI1|9211|leucine-rich, glioma inactivated 1	BC022500|LGI1|9211|leucine-rich, glioma inactivated 1	AF055636|LGI1|9211|leucine-rich, glioma inactivated 1	AF473548|LGI1|9211|leucine-rich, glioma inactivated 1	CR621199|LGI1|9211|leucine-rich, glioma inactivated 1	CR621328|LGI1|9211|leucine-rich, glioma inactivated 1	AK309416|LGI1|9211|leucine-rich, glioma inactivated 1	AY358885|LGI1|9211|leucine-rich, glioma inactivated 1	AK303956|LGI1|9211|leucine-rich, glioma inactivated 1
hg18_v1_chr1_+_3531410_3531439	0.00108853	MSX1,2.p2	NM_182752|TPRG1L|127262|tumor protein p63 regulated 1-like	CR617441|TPRG1L|127262|tumor protein p63 regulated 1-like	AK096427|TPRG1L|127262|tumor protein p63 regulated 1-like
