hg18_v1_chr3_+_39484073_39484198	1.71355	SOX2.p2	NM_182935|MOBP|4336|myelin-associated oligodendrocyte basic protein	BC075796|MOBP|4336|myelin-associated oligodendrocyte basic protein	AK127034|MOBP|4336|myelin-associated oligodendrocyte basic protein	AK290187|MOBP|4336|myelin-associated oligodendrocyte basic protein	BC022471|MOBP|4336|myelin-associated oligodendrocyte basic protein	CR610306|MOBP|4336|myelin-associated oligodendrocyte basic protein
hg18_v1_chr11_-_16380967_16380988	1.70348	SOX2.p2	AL136780|SOX6|55553|SRY (sex determining region Y)-box 6	AK310506|SOX6|55553|SRY (sex determining region Y)-box 6	BC047064|SOX6|55553|SRY (sex determining region Y)-box 6	NM_001145819|SOX6|55553|SRY (sex determining region Y)-box 6	NM_017508|SOX6|55553|SRY (sex determining region Y)-box 6
hg18_v1_chr1_-_51660328_51660380	1.63266	SOX2.p2	AK090936|EPS15|2060|epidermal growth factor receptor pathway substrate 15	AK308128|EPS15|2060|epidermal growth factor receptor pathway substrate 15	BX647676|EPS15|2060|epidermal growth factor receptor pathway substrate 15	NM_001159969|EPS15|2060|epidermal growth factor receptor pathway substrate 15
hg18_v1_chr2_+_169631777_169631965	1.52609	SOX2.p2	AY017349|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9	NM_199204|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9	AK296625|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9	BC051797|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9	AK313220|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9
hg18_v1_chr1_-_7923464_7923473	1.33117	SOX2.p2	U03397|TNFRSF9|3604|tumor necrosis factor receptor superfamily, member 9	BC006196|TNFRSF9|3604|tumor necrosis factor receptor superfamily, member 9	L12964|TNFRSF9|3604|tumor necrosis factor receptor superfamily, member 9	NM_001561|TNFRSF9|3604|tumor necrosis factor receptor superfamily, member 9
hg18_v1_chr7_+_128802719_128802719	1.32724	SOX2.p2	AK316073|AHCYL2|23382|adenosylhomocysteinase-like 2	NM_001130722|AHCYL2|23382|adenosylhomocysteinase-like 2
hg18_v1_chr1_+_181028016_181028016	1.19486	SOX2.p2	AF338436|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)	NM_030769|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)
hg18_v1_chr8_-_38324809_38324889	1.15978	SOX2.p2	BC073858|WHSC1L1|54904|Wolf-Hirschhorn syndrome candidate 1-like 1
hg18_v1_chr7_+_106292932_106292967	1.15708	SOX2.p2	AK292684|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide
hg18_v1_chr22_-_25344037_25344088	1.15476	SOX2.p2	BC036790|CRYBB1|1414|crystallin, beta B1
hg18_v1_chr3_-_3127057_3127057	1.14262	SOX2.p2	AK304256|IL5RA|3568|interleukin 5 receptor, alpha	NM_000564|IL5RA|3568|interleukin 5 receptor, alpha	NM_175724|IL5RA|3568|interleukin 5 receptor, alpha	NM_175725|IL5RA|3568|interleukin 5 receptor, alpha	NM_175726|IL5RA|3568|interleukin 5 receptor, alpha	NM_175727|IL5RA|3568|interleukin 5 receptor, alpha	NM_175728|IL5RA|3568|interleukin 5 receptor, alpha
hg18_v1_chr15_-_48198697_48198819	1.09548	SOX2.p2	BC144298|ATP8B4|79895|ATPase, class I, type 8B, member 4	BC144297|ATP8B4|79895|ATPase, class I, type 8B, member 4	NM_024837|ATP8B4|79895|ATPase, class I, type 8B, member 4
hg18_v1_chr1_-_41398126_41398191	1.0661	SOX2.p2	AK301497|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)	AK299383|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)	NM_001172222|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)
hg18_v1_chr7_+_106292975_106293045	1.05668	SOX2.p2	AK313753|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide	BX648341|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide	BC035683|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide
hg18_v1_chr4_+_71806538_71806631	1.02709	SOX2.p2	NM_001037442|RUFY3|22902|RUN and FYVE domain containing 3	NM_014961|RUFY3|22902|RUN and FYVE domain containing 3	BC051716|RUFY3|22902|RUN and FYVE domain containing 3	CR598922|RUFY3|22902|RUN and FYVE domain containing 3	BC053837|RUFY3|22902|RUN and FYVE domain containing 3	BC098433|RUFY3|22902|RUN and FYVE domain containing 3	AB020678|RUFY3|22902|RUN and FYVE domain containing 3	BC071988|RUFY3|22902|RUN and FYVE domain containing 3
hg18_v1_chr21_+_34112456_34112625	1.01653	SOX2.p2	AY340592|ITSN1|6453|intersectin 1 (SH3 domain protein)	AY340593|ITSN1|6453|intersectin 1 (SH3 domain protein)	AF180522|ITSN1|6453|intersectin 1 (SH3 domain protein)	AY138139|ITSN1|6453|intersectin 1 (SH3 domain protein)
hg18_v1_chr7_-_112515068_112515084	1.00636	SOX2.p2	NM_001146265|GPR85|54329|G protein-coupled receptor 85	NM_018970|GPR85|54329|G protein-coupled receptor 85
hg18_v1_chr10_-_61570665_61570779	0.992442	SOX2.p2	AK292927|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	NM_001149|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	AK092527|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)
hg18_v1_chr22_-_25343959_25344007	0.99028	SOX2.p2	CR456425|CRYBB1|1414|crystallin, beta B1	NM_001887|CRYBB1|1414|crystallin, beta B1	U35340|CRYBB1|1414|crystallin, beta B1
hg18_v1_chr7_-_112515035_112515051	0.988709	SOX2.p2	AK309392|GPR85|54329|G protein-coupled receptor 85	AF250237|GPR85|54329|G protein-coupled receptor 85	AK302769|GPR85|54329|G protein-coupled receptor 85
hg18_v1_chr7_-_111633428_111633575	0.977979	SOX2.p2	AY233380|DOCK4|9732|dedicator of cytokinesis 4	BC117688|DOCK4|9732|dedicator of cytokinesis 4	BC117689|DOCK4|9732|dedicator of cytokinesis 4	BC117694|DOCK4|9732|dedicator of cytokinesis 4
hg18_v1_chr7_-_112514990_112515019	0.954658	SOX2.p2	CR609708|GPR85|54329|G protein-coupled receptor 85	BC030577|GPR85|54329|G protein-coupled receptor 85
hg18_v1_chr19_+_39402167_39402274	0.914052	SOX2.p2	AL117499|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)
hg18_v1_chr17_+_63252704_63252719	0.906918	SOX2.p2	AY282495|BPTF|2186|bromodomain PHD finger transcription factor
hg18_v1_chr1_-_151296611_151296611	0.902317	SOX2.p2	AK311939|SPRR2A|6700|small proline-rich protein 2A	NM_005988|SPRR2A|6700|small proline-rich protein 2A
hg18_v1_chr3_+_142587973_142587983	0.890369	SOX2.p2	
hg18_v1_chr2_+_101874809_101875119	0.874859	SOX2.p2	BC010909|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	BC040077|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	BC065036|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4
hg18_v1_chr9_+_100745531_100746077	0.842541	SOX2.p2	AK308438|COL15A1|1306|collagen, type XV, alpha 1	CR595376|COL15A1|1306|collagen, type XV, alpha 1	NM_001855|COL15A1|1306|collagen, type XV, alpha 1	AK095885|COL15A1|1306|collagen, type XV, alpha 1	L25286|COL15A1|1306|collagen, type XV, alpha 1	D21230|COL15A1|1306|collagen, type XV, alpha 1
hg18_v1_chrX_-_11194015_11194044	0.839083	SOX2.p2	AF177663|ARHGAP6|395|Rho GTPase activating protein 6	NM_013423|ARHGAP6|395|Rho GTPase activating protein 6	AK297713|ARHGAP6|395|Rho GTPase activating protein 6
hg18_v1_chr8_+_124263932_124264010	0.823089	SOX2.p2	NM_032899|FAM83A|84985|family with sequence similarity 83, member A	NM_207006|FAM83A|84985|family with sequence similarity 83, member A	BC052300|FAM83A|84985|family with sequence similarity 83, member A
hg18_v1_chr17_-_30909219_30909222	0.822072	SOX2.p2	BC140847|SLFN14|342618|schlafen family member 14	BC157877|SLFN14|342618|schlafen family member 14	BC157879|SLFN14|342618|schlafen family member 14	NM_001129820|SLFN14|342618|schlafen family member 14
hg18_v1_chr14_-_72563497_72563672	0.812487	SOX2.p2	AB046809|ZFYVE1|53349|zinc finger, FYVE domain containing 1	AJ310569|ZFYVE1|53349|zinc finger, FYVE domain containing 1	AK027399|ZFYVE1|53349|zinc finger, FYVE domain containing 1	BC014902|ZFYVE1|53349|zinc finger, FYVE domain containing 1	BC053520|ZFYVE1|53349|zinc finger, FYVE domain containing 1	NM_021260|ZFYVE1|53349|zinc finger, FYVE domain containing 1
hg18_v1_chr17_+_19930926_19930927	0.811787	SOX2.p2	AY816328|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1	AY816329|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1	NM_001033553|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1	NM_152904|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1	AB041533|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1
hg18_v1_chr7_-_92693716_92693722	0.808483	SOX2.p2	AK096002|HEPACAM2|253012|HEPACAM family member 2	AK298361|HEPACAM2|253012|HEPACAM family member 2	NM_001039372|HEPACAM2|253012|HEPACAM family member 2
hg18_v1_chr6_+_114285209_114285646	0.801769	SOX2.p2	AK074526|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	NM_002356|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	BC013004|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	BC028284|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	BC068059|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	D10522|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	M68956|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	BC089040|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	EU832331|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	EU832416|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate
hg18_v1_chr7_+_116447499_116447508	0.801696	SOX2.p2	AK093212|ST7|7982|suppression of tumorigenicity 7
hg18_v1_chr5_-_88235624_88235677	0.78306	SOX2.p2	AL833268|MEF2C|4208|myocyte enhancer factor 2C	AL833274|MEF2C|4208|myocyte enhancer factor 2C	NM_001131005|MEF2C|4208|myocyte enhancer factor 2C	NM_001193347|MEF2C|4208|myocyte enhancer factor 2C
hg18_v1_chr9_+_102275310_102275340	0.780156	SOX2.p2	NM_003692|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1
hg18_v1_chr17_+_63252668_63252691	0.773687	SOX2.p2	AK293224|BPTF|2186|bromodomain PHD finger transcription factor
hg18_v1_chr19_+_40824486_40824534	0.770253	SOX2.p2	NM_014209|ETV2|2116|ets variant 2	AK097439|ETV2|2116|ets variant 2	BC040908|ETV2|2116|ets variant 2
hg18_v1_chr3_-_197726587_197726633	0.769386	SOX2.p2	AK291522|C3orf43|255798|chromosome 3 open reading frame 43	BC118556|C3orf43|255798|chromosome 3 open reading frame 43	BC118636|C3orf43|255798|chromosome 3 open reading frame 43	AL833140|C3orf43|255798|chromosome 3 open reading frame 43	AL833443|C3orf43|255798|chromosome 3 open reading frame 43	AK123917|C3orf43|255798|chromosome 3 open reading frame 43	NM_001077657|C3orf43|255798|chromosome 3 open reading frame 43
hg18_v1_chr5_+_121493113_121493176	0.767088	SOX2.p2	AK057483|ZNF474|133923|zinc finger protein 474	AY461732|ZNF474|133923|zinc finger protein 474	NM_207317|ZNF474|133923|zinc finger protein 474	AK290985|ZNF474|133923|zinc finger protein 474
hg18_v1_chr11_-_5130174_5130174	0.766652	SOX2.p2	BC111691|OR52A1|23538|olfactory receptor, family 52, subfamily A, member 1	BC111722|OR52A1|23538|olfactory receptor, family 52, subfamily A, member 1	NM_012375|OR52A1|23538|olfactory receptor, family 52, subfamily A, member 1
hg18_v1_chr15_+_65145248_65145663	0.76491	SOX2.p2	NM_005902|SMAD3|4088|SMAD family member 3	BC050743|SMAD3|4088|SMAD family member 3	U68019|SMAD3|4088|SMAD family member 3	U76622|SMAD3|4088|SMAD family member 3	EU446487|SMAD3|4088|SMAD family member 3	AB209616|SMAD3|4088|SMAD family member 3
hg18_v1_chr10_-_76538859_76538981	0.763956	SOX2.p2	BC009778|DUSP13|51207|dual specificity phosphatase 13	AY040091|DUSP13|51207|dual specificity phosphatase 13	AK057012|DUSP13|51207|dual specificity phosphatase 13	AY674051|DUSP13|51207|dual specificity phosphatase 13	AK291897|DUSP13|51207|dual specificity phosphatase 13	AK300679|DUSP13|51207|dual specificity phosphatase 13	AK127886|DUSP13|51207|dual specificity phosphatase 13	NM_001007271|DUSP13|51207|dual specificity phosphatase 13	NM_001007272|DUSP13|51207|dual specificity phosphatase 13	NM_001007273|DUSP13|51207|dual specificity phosphatase 13	AK291891|DUSP13|51207|dual specificity phosphatase 13
hg18_v1_chrX_+_86659370_86659552	0.763747	SOX2.p2	NM_019117|KLHL4|56062|kelch-like 4 (Drosophila)	NM_057162|KLHL4|56062|kelch-like 4 (Drosophila)	AK056457|KLHL4|56062|kelch-like 4 (Drosophila)	AB051474|KLHL4|56062|kelch-like 4 (Drosophila)	BC161675|KLHL4|56062|kelch-like 4 (Drosophila)	AL832514|KLHL4|56062|kelch-like 4 (Drosophila)	AF284765|KLHL4|56062|kelch-like 4 (Drosophila)	AF284766|KLHL4|56062|kelch-like 4 (Drosophila)	BC140839|KLHL4|56062|kelch-like 4 (Drosophila)	BC140840|KLHL4|56062|kelch-like 4 (Drosophila)	BC142652|KLHL4|56062|kelch-like 4 (Drosophila)	BC146677|KLHL4|56062|kelch-like 4 (Drosophila)
hg18_v1_chr5_-_39238818_39238931	0.742159	SOX2.p2	AF198052|FYB|2533|FYN binding protein	U93049|FYB|2533|FYN binding protein	AF001862|FYB|2533|FYN binding protein
hg18_v1_chr1_-_165754325_165754470	0.73909	SOX2.p2	DQ893778|CD247|919|CD247 molecule	EU176191|CD247|919|CD247 molecule	CR625818|CD247|919|CD247 molecule	X55510|CD247|919|CD247 molecule	X55511|CD247|919|CD247 molecule	X55512|CD247|919|CD247 molecule	CR601423|CD247|919|CD247 molecule	CR615998|CD247|919|CD247 molecule	BC025703|CD247|919|CD247 molecule	AK128376|CD247|919|CD247 molecule	AK313946|CD247|919|CD247 molecule	J04132|CD247|919|CD247 molecule	AK223325|CD247|919|CD247 molecule	NM_000734|CD247|919|CD247 molecule	NM_198053|CD247|919|CD247 molecule
hg18_v1_chr1_-_31117948_31118022	0.738461	SOX2.p2	AL049426|SDC3|9672|syndecan 3
hg18_v1_chr1_+_87569889_87569938	0.735884	SOX2.p2	
hg18_v1_chr11_-_83071084_83071115	0.722457	SOX2.p2	AK299778|DLG2|1740|discs, large homolog 2 (Drosophila)	CR933674|DLG2|1740|discs, large homolog 2 (Drosophila)	NM_001142702|DLG2|1740|discs, large homolog 2 (Drosophila)
hg18_v1_chr2_+_27518736_27518816	0.719027	SOX2.p2	BC101689|KRTCAP3|200634|keratinocyte associated protein 3	NM_001168364|KRTCAP3|200634|keratinocyte associated protein 3	NM_173853|KRTCAP3|200634|keratinocyte associated protein 3	BC101687|KRTCAP3|200634|keratinocyte associated protein 3	BC143574|KRTCAP3|200634|keratinocyte associated protein 3	AY157576|KRTCAP3|200634|keratinocyte associated protein 3	AY358993|KRTCAP3|200634|keratinocyte associated protein 3
hg18_v1_chr1_-_611896_611915	0.715931	SOX2.p2	NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29	NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3	NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16	BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3	BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3
hg18_v1_chr2_+_101680594_101680974	0.708278	SOX2.p2	BC064691|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	AK296396|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	AF096300|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	NM_004834|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	NM_145686|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	NM_145687|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	AY212247|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	AY834276|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4
hg18_v1_chr6_-_130578110_130578186	0.703167	SOX2.p2	BC029851|SAMD3|154075|sterile alpha motif domain containing 3	BC119757|SAMD3|154075|sterile alpha motif domain containing 3	BC119758|SAMD3|154075|sterile alpha motif domain containing 3	BC127653|SAMD3|154075|sterile alpha motif domain containing 3	BC127654|SAMD3|154075|sterile alpha motif domain containing 3	NM_152552|SAMD3|154075|sterile alpha motif domain containing 3
hg18_v1_chr1_-_151780720_151780864	0.691166	SOX2.p2	BC093955|S100A5|6276|S100 calcium binding protein A5	BC093957|S100A5|6276|S100 calcium binding protein A5	NM_002962|S100A5|6276|S100 calcium binding protein A5	Z18954|S100A5|6276|S100 calcium binding protein A5
hg18_v1_chr17_+_55269974_55270203	0.691004	SOX2.p2	
hg18_v1_chr7_-_111633620_111633776	0.684178	SOX2.p2	AK095906|DOCK4|9732|dedicator of cytokinesis 4	AK309605|DOCK4|9732|dedicator of cytokinesis 4	NM_014705|DOCK4|9732|dedicator of cytokinesis 4
hg18_v1_chr14_+_19761708_19761708	0.675497	SOX2.p2	NM_001004480|OR11H6|122748|olfactory receptor, family 11, subfamily H, member 6
hg18_v1_chr1_+_87569959_87570047	0.662923	SOX2.p2	CR599134|LMO4|8543|LIM domain only 4	BC065818|LMO4|8543|LIM domain only 4
hg18_v1_chr10_+_63331018_63331018	0.654305	SOX2.p2	NM_032199|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)
hg18_v1_chr17_-_36915329_36915391	0.652528	SOX2.p2	DQ890652|KRT13|3860|keratin 13	DQ893832|KRT13|3860|keratin 13	BC126184|KRT13|3860|keratin 13	BC136494|KRT13|3860|keratin 13	BC077718|KRT13|3860|keratin 13	X14640|KRT13|3860|keratin 13	CR591347|KRT13|3860|keratin 13	BC002661|KRT13|3860|keratin 13	X52426|KRT13|3860|keratin 13	AK223051|KRT13|3860|keratin 13	AK223077|KRT13|3860|keratin 13	AK290244|KRT13|3860|keratin 13	AK296806|KRT13|3860|keratin 13	AK092276|KRT13|3860|keratin 13	AK309752|KRT13|3860|keratin 13	NM_002274|KRT13|3860|keratin 13	NM_153490|KRT13|3860|keratin 13
hg18_v1_chr2_-_174475528_174475673	0.652508	SOX2.p2	
hg18_v1_chr22_-_20314366_20314434	0.65242	SOX2.p2	BC133043|YDJC|150223|YdjC homolog (bacterial)	BC133047|YDJC|150223|YdjC homolog (bacterial)
hg18_v1_chr1_-_180624380_180624393	0.648909	SOX2.p2	BC127883|GLUL|2752|glutamate-ammonia ligase
hg18_v1_chr6_-_31789824_31789829	0.648323	SOX2.p2	
hg18_v1_chr1_-_41399632_41399690	0.647442	SOX2.p2	BC009752|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)	NM_001031694|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)
hg18_v1_chr11_+_60858611_60858725	0.645843	SOX2.p2	BC001341|DAK|26007|dihydroxyacetone kinase 2 homolog (S. cerevisiae)
hg18_v1_chr1_-_151280201_151280218	0.642733	SOX2.p2	BC093801|SPRR2D|6703|small proline-rich protein 2D	BC093803|SPRR2D|6703|small proline-rich protein 2D	BC120938|SPRR2D|6703|small proline-rich protein 2D	M21302|SPRR2D|6703|small proline-rich protein 2D	NM_006945|SPRR2D|6703|small proline-rich protein 2D	AK291317|SPRR2D|6703|small proline-rich protein 2D
hg18_v1_chr1_-_151310707_151310707	0.640442	SOX2.p2	NM_001017418|SPRR2B|6701|small proline-rich protein 2B
hg18_v1_chr1_-_229058404_229058404	0.635056	SOX2.p2	AK292433|C1orf198|84886|chromosome 1 open reading frame 198	NM_001136495|C1orf198|84886|chromosome 1 open reading frame 198
hg18_v1_chr3_-_13032130_13032306	0.632819	SOX2.p2	
hg18_v1_chr1_-_151352587_151352612	0.624903	SOX2.p2	BC096108|SPRR2A|6700|small proline-rich protein 2A	BC096109|SPRR2A|6700|small proline-rich protein 2A	BC096110|SPRR2A|6700|small proline-rich protein 2A	BC096111|SPRR2A|6700|small proline-rich protein 2A	NM_001014450|SPRR2F|6705|small proline-rich protein 2F
hg18_v1_chr22_-_20314274_20314356	0.621482	SOX2.p2	CR596616|YDJC|150223|YdjC homolog (bacterial)	CR597037|YDJC|150223|YdjC homolog (bacterial)	BC064568|YDJC|150223|YdjC homolog (bacterial)	CR590781|YDJC|150223|YdjC homolog (bacterial)	CR613078|YDJC|150223|YdjC homolog (bacterial)	CR614195|YDJC|150223|YdjC homolog (bacterial)	CR618402|YDJC|150223|YdjC homolog (bacterial)	BC053663|YDJC|150223|YdjC homolog (bacterial)	BC017281|YDJC|150223|YdjC homolog (bacterial)	CR620409|YDJC|150223|YdjC homolog (bacterial)	CR624561|YDJC|150223|YdjC homolog (bacterial)	BC110075|YDJC|150223|YdjC homolog (bacterial)	BC110799|YDJC|150223|YdjC homolog (bacterial)	CR613432|YDJC|150223|YdjC homolog (bacterial)	BC057814|YDJC|150223|YdjC homolog (bacterial)	NM_001017964|YDJC|150223|YdjC homolog (bacterial)	CR600451|YDJC|150223|YdjC homolog (bacterial)	BC096754|YDJC|150223|YdjC homolog (bacterial)
hg18_v1_chr18_+_3441589_3441674	0.620559	SOX2.p2	NM_170695|TGIF1|7050|TGFB-induced factor homeobox 1	NM_173210|TGIF1|7050|TGFB-induced factor homeobox 1	BC031268|TGIF1|7050|TGFB-induced factor homeobox 1
hg18_v1_chr13_-_38462857_38462995	0.616286	SOX2.p2	DQ891676|STOML3|161003|stomatin (EPB72)-like 3	EU176604|STOML3|161003|stomatin (EPB72)-like 3	AK313632|STOML3|161003|stomatin (EPB72)-like 3	BC025760|STOML3|161003|stomatin (EPB72)-like 3	AK304159|STOML3|161003|stomatin (EPB72)-like 3	NM_001144033|STOML3|161003|stomatin (EPB72)-like 3	NM_145286|STOML3|161003|stomatin (EPB72)-like 3
hg18_v1_chr1_+_116727514_116727514	0.615405	SOX2.p2	AK296362|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide	NM_001160234|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide
hg18_v1_chr22_+_21852743_21852858	0.611772	SOX2.p2	AB209991|BCR|613|breakpoint cluster region
hg18_v1_chr17_-_53761119_53761150	0.6105	SOX2.p2	AB014512|BZRAP1|9256|benzodiazapine receptor (peripheral) associated protein 1	BC150279|BZRAP1|9256|benzodiazapine receptor (peripheral) associated protein 1	NM_004758|BZRAP1|9256|benzodiazapine receptor (peripheral) associated protein 1	NM_024418|BZRAP1|9256|benzodiazapine receptor (peripheral) associated protein 1
hg18_v1_chr15_-_56093477_56093526	0.607413	SOX2.p2	AB015228|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2	AB015227|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2	NM_170697|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2
hg18_v1_chr18_-_27594696_27594840	0.596454	SOX2.p2	BC103999|MCART2|147407|mitochondrial carrier triple repeat 2	BC104000|MCART2|147407|mitochondrial carrier triple repeat 2	BC104001|MCART2|147407|mitochondrial carrier triple repeat 2	AK302337|MCART2|147407|mitochondrial carrier triple repeat 2	NM_001034172|MCART2|147407|mitochondrial carrier triple repeat 2
hg18_v1_chr7_+_123036312_123036347	0.59641	SOX2.p2	AF428257|ASB15|142685|ankyrin repeat and SOCS box containing 15	BC100874|ASB15|142685|ankyrin repeat and SOCS box containing 15	BC100875|ASB15|142685|ankyrin repeat and SOCS box containing 15	BC100876|ASB15|142685|ankyrin repeat and SOCS box containing 15	BC100877|ASB15|142685|ankyrin repeat and SOCS box containing 15	NM_080928|ASB15|142685|ankyrin repeat and SOCS box containing 15
hg18_v1_chr6_-_136829705_136829705	0.592961	SOX2.p2	AK299355|MAP7|9053|microtubule-associated protein 7	NM_001198615|MAP7|9053|microtubule-associated protein 7
hg18_v1_chr19_+_17923110_17923110	0.588565	SOX2.p2	NM_002248|KCNN1|3780|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1	U69883|KCNN1|3780|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1
hg18_v1_chr9_+_126460511_126460540	0.58758	SOX2.p2	
hg18_v1_chr1_+_85819004_85819256	0.587315	SOX2.p2	CR622169|CYR61|3491|cysteine-rich, angiogenic inducer, 61	AK223385|CYR61|3491|cysteine-rich, angiogenic inducer, 61	AK295430|CYR61|3491|cysteine-rich, angiogenic inducer, 61	AK314571|CYR61|3491|cysteine-rich, angiogenic inducer, 61	NM_001554|CYR61|3491|cysteine-rich, angiogenic inducer, 61	CR593662|CYR61|3491|cysteine-rich, angiogenic inducer, 61	CR597890|CYR61|3491|cysteine-rich, angiogenic inducer, 61	CR623495|CYR61|3491|cysteine-rich, angiogenic inducer, 61	CR623693|CYR61|3491|cysteine-rich, angiogenic inducer, 61	BC016952|CYR61|3491|cysteine-rich, angiogenic inducer, 61	CR603266|CYR61|3491|cysteine-rich, angiogenic inducer, 61	Y12084|CYR61|3491|cysteine-rich, angiogenic inducer, 61	Z98053|CYR61|3491|cysteine-rich, angiogenic inducer, 61	Y11307|CYR61|3491|cysteine-rich, angiogenic inducer, 61	BC009199|CYR61|3491|cysteine-rich, angiogenic inducer, 61	U62015|CYR61|3491|cysteine-rich, angiogenic inducer, 61	CR595937|CYR61|3491|cysteine-rich, angiogenic inducer, 61	BC001271|CYR61|3491|cysteine-rich, angiogenic inducer, 61	AF003594|CYR61|3491|cysteine-rich, angiogenic inducer, 61	AF031385|CYR61|3491|cysteine-rich, angiogenic inducer, 61	DQ891262|CYR61|3491|cysteine-rich, angiogenic inducer, 61	DQ894449|CYR61|3491|cysteine-rich, angiogenic inducer, 61	CR536519|CYR61|3491|cysteine-rich, angiogenic inducer, 61
hg18_v1_chr1_+_205068844_205068844	0.586867	SOX2.p2	AF453946|IL19|29949|interleukin 19	NM_013371|IL19|29949|interleukin 19
hg18_v1_chr5_+_149845503_149845761	0.582899	SOX2.p2	AB209107|NDST1|3340|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
hg18_v1_chr10_+_74323344_74323535	0.581467	SOX2.p2	AK096435|OIT3|170392|oncoprotein induced transcript 3	NM_152635|OIT3|170392|oncoprotein induced transcript 3	BC126440|OIT3|170392|oncoprotein induced transcript 3	AY358339|OIT3|170392|oncoprotein induced transcript 3	AY013707|OIT3|170392|oncoprotein induced transcript 3
hg18_v1_chr12_-_101396459_101396558	0.580959	SOX2.p2	M37484|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	NM_001111284|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg18_v1_chr1_+_165564904_165564941	0.580959	SOX2.p2	NM_001198783|POU2F1|5451|POU class 2 homeobox 1
hg18_v1_chr22_+_21852911_21853187	0.579205	SOX2.p2	X06418|BCR|613|breakpoint cluster region	EU216058|BCR|613|breakpoint cluster region	EU216059|BCR|613|breakpoint cluster region	EU216061|BCR|613|breakpoint cluster region	EU216062|BCR|613|breakpoint cluster region	EU216063|BCR|613|breakpoint cluster region	EU216064|BCR|613|breakpoint cluster region	EU216067|BCR|613|breakpoint cluster region	EU216069|BCR|613|breakpoint cluster region	EU216070|BCR|613|breakpoint cluster region
hg18_v1_chr1_-_160648429_160648551	0.578584	SOX2.p2	AF256653|SH2D1B|117157|SH2 domain containing 1B	AF403479|SH2D1B|117157|SH2 domain containing 1B	DQ891975|SH2D1B|117157|SH2 domain containing 1B	DQ895166|SH2D1B|117157|SH2 domain containing 1B	AK097162|SH2D1B|117157|SH2 domain containing 1B	AK314743|SH2D1B|117157|SH2 domain containing 1B	AF484964|SH2D1B|117157|SH2 domain containing 1B	BC066595|SH2D1B|117157|SH2 domain containing 1B	BC022407|SH2D1B|117157|SH2 domain containing 1B	NM_053282|SH2D1B|117157|SH2 domain containing 1B
hg18_v1_chr1_+_165565006_165565121	0.577875	SOX2.p2	AY113189|POU2F1|5451|POU class 2 homeobox 1	BC001664|POU2F1|5451|POU class 2 homeobox 1	BC003571|POU2F1|5451|POU class 2 homeobox 1
hg18_v1_chr1_+_160618143_160618276	0.577306	SOX2.p2	AK125122|C1orf226|400793|chromosome 1 open reading frame 226	NM_001085375|C1orf226|400793|chromosome 1 open reading frame 226	BC127743|C1orf226|400793|chromosome 1 open reading frame 226	BC127744|C1orf226|400793|chromosome 1 open reading frame 226
hg18_v1_chr21_+_29593607_29593607	0.576866	SOX2.p2	AF026199|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1	NM_206866|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1
hg18_v1_chr1_-_149955870_149955916	0.575214	SOX2.p2	BC004145|CELF3|11189|CUGBP, Elav-like family member 3	BC052491|CELF3|11189|CUGBP, Elav-like family member 3	AY165003|CELF3|11189|CUGBP, Elav-like family member 3	NM_007185|CELF3|11189|CUGBP, Elav-like family member 3
hg18_v1_chr5_-_71838875_71839004	0.574831	SOX2.p2	BC121053|ZNF366|167465|zinc finger protein 366	BC121054|ZNF366|167465|zinc finger protein 366	BX647592|ZNF366|167465|zinc finger protein 366	BC029955|ZNF366|167465|zinc finger protein 366	AK097115|ZNF366|167465|zinc finger protein 366	NM_152625|ZNF366|167465|zinc finger protein 366
hg18_v1_chr1_+_46910086_46910193	0.574347	SOX2.p2	BC067853|C1orf223|374973|chromosome 1 open reading frame 223	NM_001145474|C1orf223|374973|chromosome 1 open reading frame 223	BC057818|C1orf223|374973|chromosome 1 open reading frame 223	BC126318|C1orf223|374973|chromosome 1 open reading frame 223	BC144026|C1orf223|374973|chromosome 1 open reading frame 223	BC144027|C1orf223|374973|chromosome 1 open reading frame 223	FJ211596|C1orf223|374973|chromosome 1 open reading frame 223
hg18_v1_chr22_+_21852699_21852728	0.571637	SOX2.p2	BC066122|BCR|613|breakpoint cluster region
hg18_v1_chr12_-_53065758_53065853	0.570851	SOX2.p2	AK092724|ZNF385A|25946|zinc finger protein 385A	AY461717|ZNF385A|25946|zinc finger protein 385A
hg18_v1_chr17_+_53761293_53761374	0.562437	SOX2.p2	AK311311|LOC100506779|100506779|hypothetical LOC100506779	AK311208|LOC100506779|100506779|hypothetical LOC100506779
hg18_v1_chr1_+_32251988_32252183	0.562164	SOX2.p2	AK293369|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	AK091346|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	AK312916|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	AK303218|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	CR606103|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	CR625346|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	BC000717|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	BC019109|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	M88108|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	NM_006559|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	BC010132|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	CR616264|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	DQ895323|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	U78971|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1
hg18_v1_chr10_+_11246934_11247016	0.558611	SOX2.p2	AK299983|CELF2|10659|CUGBP, Elav-like family member 2	NM_001025076|CELF2|10659|CUGBP, Elav-like family member 2	NM_001083591|CELF2|10659|CUGBP, Elav-like family member 2
hg18_v1_chr3_-_192531018_192531018	0.555939	SOX2.p2	AK090630|UTS2D|257313|urotensin 2 domain containing	NM_198152|UTS2D|257313|urotensin 2 domain containing
hg18_v1_chr3_+_112743729_112743785	0.553694	SOX2.p2	AK290719|CD96|10225|CD96 molecule	AK315237|CD96|10225|CD96 molecule	AL833681|CD96|10225|CD96 molecule
hg18_v1_chr8_+_21833162_21833227	0.553465	SOX2.p2	AK291472|XPO7|23039|exportin 7	AB018288|XPO7|23039|exportin 7	AF064729|XPO7|23039|exportin 7
hg18_v1_chr6_-_11887265_11887265	0.552849	SOX2.p2	NM_001143948|C6orf105|84830|chromosome 6 open reading frame 105	NM_032744|C6orf105|84830|chromosome 6 open reading frame 105
hg18_v1_chr1_-_114215768_114215897	0.551952	SOX2.p2	AF001846|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	GU479452|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	AF150732|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	AF077031|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	BC071670|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	AK303124|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	AK310570|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	AK310698|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	BC017785|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	NM_001193431|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	NM_012411|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	NM_015967|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)
hg18_v1_chr12_-_107551783_107551800	0.550727	SOX2.p2	AK127638|SELPLG|6404|selectin P ligand	AK098315|SELPLG|6404|selectin P ligand	NM_003006|SELPLG|6404|selectin P ligand
hg18_v1_chr7_+_156128431_156128481	0.550089	SOX2.p2	NM_001184997|RNF32|140545|ring finger protein 32	AF325690|RNF32|140545|ring finger protein 32
hg18_v1_chr1_+_61320213_61321079	0.547695	SOX2.p2	AB037860|NFIA|4774|nuclear factor I/A	NM_001134673|NFIA|4774|nuclear factor I/A	NM_005595|NFIA|4774|nuclear factor I/A	AK299356|NFIA|4774|nuclear factor I/A	BC022264|NFIA|4774|nuclear factor I/A	DQ893250|NFIA|4774|nuclear factor I/A	DQ896579|NFIA|4774|nuclear factor I/A
hg18_v1_chr22_+_38652555_38652598	0.546353	SOX2.p2	AK303280|GRAP2|9402|GRB2-related adaptor protein 2	AK303657|GRAP2|9402|GRB2-related adaptor protein 2	AK312830|GRAP2|9402|GRB2-related adaptor protein 2	AK303470|GRAP2|9402|GRB2-related adaptor protein 2
hg18_v1_chr12_-_107551744_107551780	0.545245	SOX2.p2	AK290395|SELPLG|6404|selectin P ligand	BC029782|SELPLG|6404|selectin P ligand
hg18_v1_chr1_-_155095289_155095335	0.544855	SOX2.p2	AF064078|INSRR|3645|insulin receptor-related receptor	NM_014215|INSRR|3645|insulin receptor-related receptor	AK310760|INSRR|3645|insulin receptor-related receptor
hg18_v1_chr7_-_104696678_104696761	0.539994	SOX2.p2	BC035214|SRPK2|6733|SRSF protein kinase 2	U88666|SRPK2|6733|SRSF protein kinase 2	NM_182691|SRPK2|6733|SRSF protein kinase 2
hg18_v1_chr1_-_154665807_154665994	0.533483	SOX2.p2	NM_006365|C1orf61|10485|chromosome 1 open reading frame 61	U49857|C1orf61|10485|chromosome 1 open reading frame 61	BC059943|C1orf61|10485|chromosome 1 open reading frame 61	BC107686|C1orf61|10485|chromosome 1 open reading frame 61	BC050448|C1orf61|10485|chromosome 1 open reading frame 61	AK095626|C1orf61|10485|chromosome 1 open reading frame 61	BC054045|C1orf61|10485|chromosome 1 open reading frame 61
hg18_v1_chr7_+_111633972_111634041	0.533318	SOX2.p2	AL713791|ZNF277|11179|zinc finger protein 277	AK314630|ZNF277|11179|zinc finger protein 277	BC020626|ZNF277|11179|zinc finger protein 277	AK027128|ZNF277|11179|zinc finger protein 277	AF308819|ZNF277|11179|zinc finger protein 277
hg18_v1_chr7_-_5429702_5429702	0.531084	SOX2.p2	NM_001080495|TNRC18|84629|trinucleotide repeat containing 18
hg18_v1_chr1_+_1062137_1062259	0.530363	SOX2.p2	BC028014|LOC254099|254099|hypothetical protein LOC254099
hg18_v1_chr1_-_21375891_21375931	0.528891	SOX2.p2	BC072413|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3	AB209119|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3
hg18_v1_chr1_-_32574185_32574443	0.528854	SOX2.p2	CR602280|MARCKSL1|65108|MARCKS-like 1	AM393505|MARCKSL1|65108|MARCKS-like 1	DQ893237|MARCKSL1|65108|MARCKS-like 1	DQ896567|MARCKSL1|65108|MARCKS-like 1	X70326|MARCKSL1|65108|MARCKS-like 1	CR593904|MARCKSL1|65108|MARCKS-like 1	CR611715|MARCKSL1|65108|MARCKS-like 1	CR611461|MARCKSL1|65108|MARCKS-like 1	CR607885|MARCKSL1|65108|MARCKS-like 1	CR625318|MARCKSL1|65108|MARCKS-like 1	CR599424|MARCKSL1|65108|MARCKS-like 1	CR608551|MARCKSL1|65108|MARCKS-like 1	CR603178|MARCKSL1|65108|MARCKS-like 1	AL713653|MARCKSL1|65108|MARCKS-like 1	AY007131|MARCKSL1|65108|MARCKS-like 1	CR595141|MARCKSL1|65108|MARCKS-like 1	CR595693|MARCKSL1|65108|MARCKS-like 1	BC007904|MARCKSL1|65108|MARCKS-like 1	CR602564|MARCKSL1|65108|MARCKS-like 1	BC066915|MARCKSL1|65108|MARCKS-like 1	NM_023009|MARCKSL1|65108|MARCKS-like 1	CR625187|MARCKSL1|65108|MARCKS-like 1	CR590657|MARCKSL1|65108|MARCKS-like 1	CR594797|MARCKSL1|65108|MARCKS-like 1	CR596259|MARCKSL1|65108|MARCKS-like 1	CR596703|MARCKSL1|65108|MARCKS-like 1	CR596974|MARCKSL1|65108|MARCKS-like 1	CR597180|MARCKSL1|65108|MARCKS-like 1	CR599096|MARCKSL1|65108|MARCKS-like 1	CR617460|MARCKSL1|65108|MARCKS-like 1	CR621540|MARCKSL1|65108|MARCKS-like 1	CR624801|MARCKSL1|65108|MARCKS-like 1
hg18_v1_chr5_+_140215778_140215817	0.526272	SOX2.p2	BC130447|PCDHA10|56139|protocadherin alpha 10	AF152306|PCDHA10|56139|protocadherin alpha 10	AF152475|PCDHA10|56139|protocadherin alpha 10	AF169689|PCDHA10|56139|protocadherin alpha 10	NM_018901|PCDHA10|56139|protocadherin alpha 10	NM_031859|PCDHA10|56139|protocadherin alpha 10	NM_031860|PCDHA10|56139|protocadherin alpha 10
hg18_v1_chr15_-_43280664_43280664	0.52616	SOX2.p2	AK096267|SHF|90525|Src homology 2 domain containing F	NM_138356|SHF|90525|Src homology 2 domain containing F
hg18_v1_chr17_-_36232366_36232396	0.520721	SOX2.p2	J04029|KRT10|3858|keratin 10	DQ893356|KRT10|3858|keratin 10	DQ896675|KRT10|3858|keratin 10	BC034697|KRT10|3858|keratin 10	NM_000421|KRT10|3858|keratin 10
hg18_v1_chr1_-_180624494_180624558	0.520661	SOX2.p2	AY486122|GLUL|2752|glutamate-ammonia ligase	S70290|GLUL|2752|glutamate-ammonia ligase	DQ893278|GLUL|2752|glutamate-ammonia ligase	DQ896609|GLUL|2752|glutamate-ammonia ligase	EU832658|GLUL|2752|glutamate-ammonia ligase	EU832735|GLUL|2752|glutamate-ammonia ligase
hg18_v1_chr3_-_143230124_143230196	0.518422	SOX2.p2	AK303634|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	U18422|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	BC007976|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	AK303181|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	NM_001178141|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	NM_001178142|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	NM_006286|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)
hg18_v1_chr7_-_158304062_158304201	0.516374	SOX2.p2	AK126214|ESYT2|57488|extended synaptotagmin-like protein 2
hg18_v1_chr1_+_154120170_154120225	0.512346	SOX2.p2	AK026178|SYT11|23208|synaptotagmin XI
hg18_v1_chr2_+_33213111_33213308	0.512147	SOX2.p2	NM_000627|LTBP1|4052|latent transforming growth factor beta binding protein 1	NM_001166264|LTBP1|4052|latent transforming growth factor beta binding protein 1	NM_001166265|LTBP1|4052|latent transforming growth factor beta binding protein 1	NM_001166266|LTBP1|4052|latent transforming growth factor beta binding protein 1	AB208801|LTBP1|4052|latent transforming growth factor beta binding protein 1	BC130289|LTBP1|4052|latent transforming growth factor beta binding protein 1	BC144127|LTBP1|4052|latent transforming growth factor beta binding protein 1	BC144128|LTBP1|4052|latent transforming growth factor beta binding protein 1	M34057|LTBP1|4052|latent transforming growth factor beta binding protein 1	AF489528|LTBP1|4052|latent transforming growth factor beta binding protein 1
hg18_v1_chrX_+_70419766_70419766	0.512046	SOX2.p2	NM_001145408|NONO|4841|non-POU domain containing, octamer-binding	NM_001145409|NONO|4841|non-POU domain containing, octamer-binding	NM_001145410|NONO|4841|non-POU domain containing, octamer-binding	NM_007363|NONO|4841|non-POU domain containing, octamer-binding
hg18_v1_chr22_-_20419975_20420122	0.511276	SOX2.p2	BC034486|YPEL1|29799|yippee-like 1 (Drosophila)	BC074501|YPEL1|29799|yippee-like 1 (Drosophila)	BC048303|YPEL1|29799|yippee-like 1 (Drosophila)	NM_013313|YPEL1|29799|yippee-like 1 (Drosophila)	AB098734|YPEL1|29799|yippee-like 1 (Drosophila)	AB098735|YPEL1|29799|yippee-like 1 (Drosophila)
hg18_v1_chr16_-_20610078_20610078	0.50931	SOX2.p2	AB059429|ACSM1|116285|acyl-CoA synthetase medium-chain family member 1	BC125177|ACSM1|116285|acyl-CoA synthetase medium-chain family member 1	BC125178|ACSM1|116285|acyl-CoA synthetase medium-chain family member 1	NM_052956|ACSM1|116285|acyl-CoA synthetase medium-chain family member 1
hg18_v1_chr1_-_21375939_21375975	0.509294	SOX2.p2	NM_001198801|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3	NM_001198802|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3
hg18_v1_chr1_-_26105954_26105954	0.504784	SOX2.p2	NM_203399|STMN1|3925|stathmin 1
hg18_v1_chr4_-_76817635_76817717	0.502665	SOX2.p2	NM_203504|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2	NM_203505|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2
hg18_v1_chr6_-_76022565_76022647	0.498253	SOX2.p2	AJ420517|TMEM30A|55754|transmembrane protein 30A
hg18_v1_chr2_+_220017617_220017638	0.497483	SOX2.p2	AY603755|SPEG|10290|SPEG complex locus
hg18_v1_chr2_+_101874765_101874783	0.496157	SOX2.p2	BC045694|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4
hg18_v1_chr11_-_4555625_4555626	0.495076	SOX2.p2	AF439154|C11orf40|143501|chromosome 11 open reading frame 40	NM_144663|C11orf40|143501|chromosome 11 open reading frame 40
hg18_v1_chr7_+_106293112_106293218	0.491685	SOX2.p2	NM_002649|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide	X83368|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide
hg18_v1_chr7_-_142293382_142293628	0.491433	SOX2.p2	AF304463|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6	AF365928|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6	AJ243500|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6	AJ243501|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6	AF365927|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6	NM_018646|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6	AK291707|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6	AJ487964|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6
hg18_v1_chr14_+_59934178_59934231	0.49098	SOX2.p2	
hg18_v1_chr1_-_24112345_24112438	0.489841	SOX2.p2	BC069722|CNR2|1269|cannabinoid receptor 2 (macrophage)	NM_001841|CNR2|1269|cannabinoid receptor 2 (macrophage)	X74328|CNR2|1269|cannabinoid receptor 2 (macrophage)
hg18_v1_chr2_-_38683119_38683272	0.488713	SOX2.p2	CR600541|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like
hg18_v1_chr1_+_198975227_198975361	0.487006	SOX2.p2	AK095640|CAMSAP1L1|23271|calmodulin regulated spectrin-associated protein 1-like 1	NM_203459|CAMSAP1L1|23271|calmodulin regulated spectrin-associated protein 1-like 1
hg18_v1_chr17_-_44006808_44006847	0.487001	SOX2.p2	NM_002146|HOXB3|3213|homeobox B3	AK027609|HOXB3|3213|homeobox B3
hg18_v1_chr1_+_39647762_39647762	0.486803	SOX2.p2	NM_015038|KIAA0754|643314|KIAA0754
hg18_v1_chr12_-_107551694_107551713	0.486136	SOX2.p2	AK225644|SELPLG|6404|selectin P ligand	U02297|SELPLG|6404|selectin P ligand	AK295238|SELPLG|6404|selectin P ligand
hg18_v1_chr13_+_92677012_92677845	0.485935	SOX2.p2	NM_005708|GPC6|10082|glypican 6	AF105267|GPC6|10082|glypican 6	AY358462|GPC6|10082|glypican 6	BC106947|GPC6|10082|glypican 6	AK304338|GPC6|10082|glypican 6	AK130013|GPC6|10082|glypican 6	AK290144|GPC6|10082|glypican 6	AK074741|GPC6|10082|glypican 6
hg18_v1_chr8_+_124264054_124264274	0.484547	SOX2.p2	BC007828|FAM83A|84985|family with sequence similarity 83, member A
hg18_v1_chrX_-_151370325_151370486	0.484518	SOX2.p2	S62908|GABRA3|2556|gamma-aminobutyric acid (GABA) A receptor, alpha 3	BC028629|GABRA3|2556|gamma-aminobutyric acid (GABA) A receptor, alpha 3	NM_000808|GABRA3|2556|gamma-aminobutyric acid (GABA) A receptor, alpha 3
hg18_v1_chr14_-_80475636_80475636	0.482685	SOX2.p2	NM_152446|C14orf145|145508|chromosome 14 open reading frame 145
hg18_v1_chr5_+_140871107_140871323	0.482581	SOX2.p2	
hg18_v1_chr3_-_158704056_158704108	0.48163	SOX2.p2	BC078142|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)	BC057999|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)	NM_001167915|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)	NM_001167916|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)
hg18_v1_chr10_+_70517823_70517861	0.480102	SOX2.p2	NM_002727|SRGN|5552|serglycin	CR626092|SRGN|5552|serglycin	CR626802|SRGN|5552|serglycin
hg18_v1_chr4_-_40211324_40211358	0.479371	SOX2.p2	BX648404|RBM47|54502|RNA binding motif protein 47	AF262323|RBM47|54502|RNA binding motif protein 47
hg18_v1_chr4_-_68793928_68794006	0.47763	SOX2.p2	BC126195|TMPRSS11B|132724|transmembrane protease, serine 11B	AK310210|TMPRSS11B|132724|transmembrane protease, serine 11B	AL833167|TMPRSS11B|132724|transmembrane protease, serine 11B	BX537945|TMPRSS11B|132724|transmembrane protease, serine 11B	AK290904|TMPRSS11B|132724|transmembrane protease, serine 11B	NM_182502|TMPRSS11B|132724|transmembrane protease, serine 11B
hg18_v1_chr1_+_36121382_36121399	0.466311	SOX2.p2	AF093097|EIF2C1|26523|eukaryotic translation initiation factor 2C, 1	NM_012199|EIF2C1|26523|eukaryotic translation initiation factor 2C, 1
hg18_v1_chr2_-_30883775_30883820	0.464063	SOX2.p2	BC117345|CAPN13|92291|calpain 13	BC117347|CAPN13|92291|calpain 13	AK308037|CAPN13|92291|calpain 13	AK074418|CAPN13|92291|calpain 13	BX640793|CAPN13|92291|calpain 13	NM_144575|CAPN13|92291|calpain 13	AK290298|CAPN13|92291|calpain 13
hg18_v1_chr10_+_70517863_70517960	0.460162	SOX2.p2	D28395|SRGN|5552|serglycin	BC022313|SRGN|5552|serglycin	AK311873|SRGN|5552|serglycin	BC015516|SRGN|5552|serglycin	J03223|SRGN|5552|serglycin	CR603277|SRGN|5552|serglycin	CR612769|SRGN|5552|serglycin	CR609954|SRGN|5552|serglycin	CR610350|SRGN|5552|serglycin	X17042|SRGN|5552|serglycin	CR616782|SRGN|5552|serglycin
hg18_v1_chr19_+_12810258_12810385	0.459398	SOX2.p2	NM_014975|MAST1|22983|microtubule associated serine/threonine kinase 1	CR609181|MAST1|22983|microtubule associated serine/threonine kinase 1	AB023190|MAST1|22983|microtubule associated serine/threonine kinase 1	AK297553|MAST1|22983|microtubule associated serine/threonine kinase 1
hg18_v1_chr11_-_117600918_117601018	0.459182	SOX2.p2	AK090409|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1	AY138965|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1	AY358362|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1	AY093686|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1	AK298722|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1	AK300851|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1	AK301099|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1	AJ515553|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1	NM_001098526|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1
hg18_v1_chr12_+_14429499_14429579	0.455833	SOX2.p2	AK304184|ATF7IP|55729|activating transcription factor 7 interacting protein	BX648096|ATF7IP|55729|activating transcription factor 7 interacting protein
hg18_v1_chr17_-_1195096_1195116	0.45534	SOX2.p2	L13388|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)
hg18_v1_chr5_-_178977441_178977522	0.454197	SOX2.p2	AK298193|HNRNPH1|3187|heterogeneous nuclear ribonucleoprotein H1 (H)
hg18_v1_chr5_+_180726874_180726893	0.448337	SOX2.p2	BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3	BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3	NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29	NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3	NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16
hg18_v1_chr7_+_115637795_115637996	0.448234	SOX2.p2	AK299104|TES|26136|testis derived transcript (3 LIM domains)	BC001451|TES|26136|testis derived transcript (3 LIM domains)	NM_015641|TES|26136|testis derived transcript (3 LIM domains)	AK021575|TES|26136|testis derived transcript (3 LIM domains)	AK300546|TES|26136|testis derived transcript (3 LIM domains)	AK309324|TES|26136|testis derived transcript (3 LIM domains)	AK222840|TES|26136|testis derived transcript (3 LIM domains)	AF245356|TES|26136|testis derived transcript (3 LIM domains)	AJ250865|TES|26136|testis derived transcript (3 LIM domains)	AK315644|TES|26136|testis derived transcript (3 LIM domains)	EU176352|TES|26136|testis derived transcript (3 LIM domains)	EU176694|TES|26136|testis derived transcript (3 LIM domains)
hg18_v1_chr10_-_74863303_74863375	0.448057	SOX2.p2	BC094693|ZMYND17|118490|zinc finger, MYND-type containing 17	AK309870|ZMYND17|118490|zinc finger, MYND-type containing 17	CR936824|ZMYND17|118490|zinc finger, MYND-type containing 17	AK096884|ZMYND17|118490|zinc finger, MYND-type containing 17	NM_001024593|ZMYND17|118490|zinc finger, MYND-type containing 17	BX537678|ZMYND17|118490|zinc finger, MYND-type containing 17
hg18_v1_chr8_-_107023_107023	0.447716	SOX2.p2	NM_001005504|OR4F21|441308|olfactory receptor, family 4, subfamily F, member 21
hg18_v1_chr1_-_223907283_223907538	0.447142	SOX2.p2	AF519769|ENAH|55740|enabled homolog (Drosophila)	AY345143|ENAH|55740|enabled homolog (Drosophila)	AK290179|ENAH|55740|enabled homolog (Drosophila)	BC095481|ENAH|55740|enabled homolog (Drosophila)	NM_001008493|ENAH|55740|enabled homolog (Drosophila)	NM_018212|ENAH|55740|enabled homolog (Drosophila)
hg18_v1_chr1_-_152431175_152431232	0.447109	SOX2.p2	X04201|TPM3|7170|tropomyosin 3	BC062740|TPM3|7170|tropomyosin 3	AK092690|TPM3|7170|tropomyosin 3	BC008407|TPM3|7170|tropomyosin 3	BC008425|TPM3|7170|tropomyosin 3	AK056997|TPM3|7170|tropomyosin 3	NM_152263|TPM3|7170|tropomyosin 3
hg18_v1_chr1_+_242283906_242283930	0.446954	SOX2.p2	
hg18_v1_chr1_+_36121400_36121402	0.446219	SOX2.p2	BC063275|EIF2C1|26523|eukaryotic translation initiation factor 2C, 1
hg18_v1_chr7_+_142670624_142670710	0.445933	SOX2.p2	NM_001143679|GSTK1|373156|glutathione S-transferase kappa 1	NM_001143680|GSTK1|373156|glutathione S-transferase kappa 1	NM_001143681|GSTK1|373156|glutathione S-transferase kappa 1	NM_015917|GSTK1|373156|glutathione S-transferase kappa 1	AK295592|GSTK1|373156|glutathione S-transferase kappa 1	AL136938|GSTK1|373156|glutathione S-transferase kappa 1	AF087849|GSTK1|373156|glutathione S-transferase kappa 1	CR614943|GSTK1|373156|glutathione S-transferase kappa 1	AY520571|GSTK1|373156|glutathione S-transferase kappa 1	CR600089|GSTK1|373156|glutathione S-transferase kappa 1	AF070657|GSTK1|373156|glutathione S-transferase kappa 1	AK000640|GSTK1|373156|glutathione S-transferase kappa 1	BC001231|GSTK1|373156|glutathione S-transferase kappa 1	AK095263|GSTK1|373156|glutathione S-transferase kappa 1	AK289580|GSTK1|373156|glutathione S-transferase kappa 1	CR615801|GSTK1|373156|glutathione S-transferase kappa 1	AK289570|GSTK1|373156|glutathione S-transferase kappa 1
hg18_v1_chr7_-_106088565_106088914	0.445842	SOX2.p2	AK093350|FLJ36031|168455|hypothetical protein FLJ36031	BC013906|FLJ36031|168455|hypothetical protein FLJ36031	NM_175884|FLJ36031|168455|hypothetical protein FLJ36031
hg18_v1_chr1_+_22107137_22107137	0.443028	SOX2.p2	D28406|RPL21|6144|ribosomal protein L21
hg18_v1_chr11_-_5523328_5523354	0.440013	SOX2.p2	NM_001005289|OR52H1|390067|olfactory receptor, family 52, subfamily H, member 1	BC136998|OR52H1|390067|olfactory receptor, family 52, subfamily H, member 1
hg18_v1_chr1_+_86785346_86785513	0.439484	SOX2.p2	NM_012128|CLCA4|22802|chloride channel accessory 4	AK000072|CLCA4|22802|chloride channel accessory 4	AK314430|CLCA4|22802|chloride channel accessory 4	BC113687|CLCA4|22802|chloride channel accessory 4	BC113689|CLCA4|22802|chloride channel accessory 4	AF127035|CLCA4|22802|chloride channel accessory 4	AY358470|CLCA4|22802|chloride channel accessory 4	AK307785|CLCA4|22802|chloride channel accessory 4	AK307898|CLCA4|22802|chloride channel accessory 4	AK293766|CLCA4|22802|chloride channel accessory 4
hg18_v1_chr1_+_207668787_207668790	0.43652	SOX2.p2	NM_001104548|LOC642587|642587|NPC-A-5
hg18_v1_chr1_+_242283129_242283204	0.434994	SOX2.p2	BC078175|ZNF238|10472|zinc finger protein 238	AJ001388|ZNF238|10472|zinc finger protein 238	NM_006352|ZNF238|10472|zinc finger protein 238
hg18_v1_chr11_+_5667494_5667687	0.43485	SOX2.p2	NM_006074|TRIM22|10346|tripartite motif containing 22	AK308221|TRIM22|10346|tripartite motif containing 22	AK310098|TRIM22|10346|tripartite motif containing 22	BC022281|TRIM22|10346|tripartite motif containing 22	AK298715|TRIM22|10346|tripartite motif containing 22	BC035582|TRIM22|10346|tripartite motif containing 22	AK290434|TRIM22|10346|tripartite motif containing 22	X82200|TRIM22|10346|tripartite motif containing 22	AK308796|TRIM22|10346|tripartite motif containing 22	AK301192|TRIM22|10346|tripartite motif containing 22
hg18_v1_chr3_+_112743615_112743697	0.434304	SOX2.p2	NM_005816|CD96|10225|CD96 molecule	NM_198196|CD96|10225|CD96 molecule	BC020749|CD96|10225|CD96 molecule	BC027914|CD96|10225|CD96 molecule
hg18_v1_chr3_+_49543374_49543452	0.4332	SOX2.p2	
hg18_v1_chr4_+_48180033_48180335	0.432425	SOX2.p2	AK126542|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4	NM_152679|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4	BC019066|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4	BC012048|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4	DQ892628|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4	EU176704|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4	AY704414|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4
hg18_v1_chrX_+_106336517_106336517	0.432021	SOX2.p2	BC033510|CXorf41|139212|chromosome X open reading frame 41	NM_001169154|CXorf41|139212|chromosome X open reading frame 41	NM_173494|CXorf41|139212|chromosome X open reading frame 41
hg18_v1_chr5_+_137701122_137701185	0.431937	SOX2.p2	NM_001135647|FAM53C|51307|family with sequence similarity 53, member C	BC052993|FAM53C|51307|family with sequence similarity 53, member C
hg18_v1_chr22_+_38213174_38213298	0.431027	SOX2.p2	NM_001098270|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase	AK313664|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase	CR456519|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase	D13789|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase	CU013119|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase	CU013407|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase
hg18_v1_chr22_+_18091065_18091070	0.429007	SOX2.p2	NM_000407|GP1BB|2812|glycoprotein Ib (platelet), beta polypeptide	J03259|GP1BB|2812|glycoprotein Ib (platelet), beta polypeptide
hg18_v1_chr14_+_31868229_31868346	0.429005	SOX2.p2	NM_004274|AKAP6|9472|A kinase (PRKA) anchor protein 6	U17195|AKAP6|9472|A kinase (PRKA) anchor protein 6	AB002309|AKAP6|9472|A kinase (PRKA) anchor protein 6	BC150288|AKAP6|9472|A kinase (PRKA) anchor protein 6	BC150185|AKAP6|9472|A kinase (PRKA) anchor protein 6	BC154413|AKAP6|9472|A kinase (PRKA) anchor protein 6	BC137232|AKAP6|9472|A kinase (PRKA) anchor protein 6	BC137233|AKAP6|9472|A kinase (PRKA) anchor protein 6
hg18_v1_chr2_+_62787534_62787535	0.428194	SOX2.p2	BC029477|EHBP1|23301|EH domain binding protein 1	NM_001142614|EHBP1|23301|EH domain binding protein 1
hg18_v1_chr22_+_25347927_25347935	0.425187	SOX2.p2	BC069404|CRYBA4|1413|crystallin, beta A4	CR456424|CRYBA4|1413|crystallin, beta A4	NM_001886|CRYBA4|1413|crystallin, beta A4	U59057|CRYBA4|1413|crystallin, beta A4	CU012985|CRYBA4|1413|crystallin, beta A4	CU013273|CRYBA4|1413|crystallin, beta A4	BC096171|CRYBA4|1413|crystallin, beta A4	BC096172|CRYBA4|1413|crystallin, beta A4	BC096173|CRYBA4|1413|crystallin, beta A4	BC096174|CRYBA4|1413|crystallin, beta A4
hg18_v1_chr7_+_111633878_111633938	0.42084	SOX2.p2	AF209198|ZNF277|11179|zinc finger protein 277	NM_021994|ZNF277|11179|zinc finger protein 277
hg18_v1_chr19_+_11510578_11510740	0.41973	SOX2.p2	BC022015|CNN1|1264|calponin 1, basic, smooth muscle	NM_001299|CNN1|1264|calponin 1, basic, smooth muscle	AK316406|CNN1|1264|calponin 1, basic, smooth muscle	BC036307|CNN1|1264|calponin 1, basic, smooth muscle	D17408|CNN1|1264|calponin 1, basic, smooth muscle	CR620483|CNN1|1264|calponin 1, basic, smooth muscle	U37019|CNN1|1264|calponin 1, basic, smooth muscle	AK223234|CNN1|1264|calponin 1, basic, smooth muscle	AK301888|CNN1|1264|calponin 1, basic, smooth muscle	AK313255|CNN1|1264|calponin 1, basic, smooth muscle	S80560|CNN1|1264|calponin 1, basic, smooth muscle	CR615873|CNN1|1264|calponin 1, basic, smooth muscle
hg18_v1_chr3_-_15348811_15349080	0.419469	SOX2.p2	BC023195|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)	DQ892875|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)	EU176725|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)	AB005047|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)	CR601004|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)	CR592833|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)	BC010123|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)
hg18_v1_chr17_-_72151314_72151488	0.417228	SOX2.p2	AY096001|ST6GALNAC1|55808|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1	BC022462|ST6GALNAC1|55808|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1	AK310906|ST6GALNAC1|55808|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1	AY358918|ST6GALNAC1|55808|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1	BC063830|ST6GALNAC1|55808|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1	NM_018414|ST6GALNAC1|55808|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1
hg18_v1_chr13_-_98757634_98757749	0.416361	SOX2.p2	CR597919|GPR183|1880|G protein-coupled receptor 183	CR609579|GPR183|1880|G protein-coupled receptor 183	AK223390|GPR183|1880|G protein-coupled receptor 183	BC020752|GPR183|1880|G protein-coupled receptor 183	CR614065|GPR183|1880|G protein-coupled receptor 183	AK292091|GPR183|1880|G protein-coupled receptor 183	AK313443|GPR183|1880|G protein-coupled receptor 183	NM_004951|GPR183|1880|G protein-coupled receptor 183
hg18_v1_chr11_-_64403712_64403762	0.416283	SOX2.p2	AK302930|EHD1|10938|EH-domain containing 1	AK097842|EHD1|10938|EH-domain containing 1
hg18_v1_chr1_-_117011824_117011989	0.415127	SOX2.p2	NM_001007237|IGSF3|3321|immunoglobulin superfamily, member 3	NM_001542|IGSF3|3321|immunoglobulin superfamily, member 3	BC110651|IGSF3|3321|immunoglobulin superfamily, member 3
hg18_v1_chr1_-_115039614_115039761	0.413849	SOX2.p2	AK291349|AMPD1|270|adenosine monophosphate deaminase 1	AK314252|AMPD1|270|adenosine monophosphate deaminase 1	BC056678|AMPD1|270|adenosine monophosphate deaminase 1	M60092|AMPD1|270|adenosine monophosphate deaminase 1	AK097077|AMPD1|270|adenosine monophosphate deaminase 1	NM_000036|AMPD1|270|adenosine monophosphate deaminase 1	NM_001172626|AMPD1|270|adenosine monophosphate deaminase 1
hg18_v1_chr10_+_114699953_114700631	0.411283	SOX2.p2	AK225809|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001146274|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001146283|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001146284|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001146285|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001146286|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001198525|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001198526|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001198527|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001198528|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001198529|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001198530|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001198531|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_030756|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	FJ010174|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	Y11306|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	AK315243|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	FJ010168|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	FJ010169|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	FJ010172|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	FJ010166|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	FJ010167|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	FJ010170|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	BC032656|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	FJ010171|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	AK299295|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	AB440195|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	AB451266|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	CR536574|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352838|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352839|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352840|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352841|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352842|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352843|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352844|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352845|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352846|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352847|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352848|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352849|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352850|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352851|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	BX648364|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)
hg18_v1_chr17_-_53515563_53515669	0.410649	SOX2.p2	
hg18_v1_chr15_+_49760841_49761005	0.408922	SOX2.p2	AF453583|SCG3|29106|secretogranin III	NM_001165257|SCG3|29106|secretogranin III	NM_013243|SCG3|29106|secretogranin III	AF078851|SCG3|29106|secretogranin III	AY359093|SCG3|29106|secretogranin III	AK075314|SCG3|29106|secretogranin III	AK296466|SCG3|29106|secretogranin III	AK290175|SCG3|29106|secretogranin III
hg18_v1_chrX_+_133952633_133952722	0.408696	SOX2.p2	BC008642|LOC644538|644538|hypothetical protein LOC644538	NM_001163438|LOC644538|644538|hypothetical protein LOC644538
hg18_v1_chr11_+_123625632_123625632	0.407587	SOX2.p2	NM_001002905|OR8G1|26494|olfactory receptor, family 8, subfamily G, member 1
hg18_v1_chr1_+_116744992_116745102	0.405184	SOX2.p2	CR614469|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide
hg18_v1_chr19_+_56990222_56990227	0.40339	SOX2.p2	AK123030|FPR3|2359|formyl peptide receptor 3	AK292541|FPR3|2359|formyl peptide receptor 3	NM_002030|FPR3|2359|formyl peptide receptor 3	BC059388|FPR3|2359|formyl peptide receptor 3
hg18_v1_chr19_+_60580015_60580015	0.400041	SOX2.p2	AF442729|TMEM190|147744|transmembrane protein 190	BC128189|TMEM190|147744|transmembrane protein 190	BC128190|TMEM190|147744|transmembrane protein 190	NM_139172|TMEM190|147744|transmembrane protein 190
hg18_v1_chr15_+_72397934_72397983	0.399232	SOX2.p2	AK290709|CCDC33|80125|coiled-coil domain containing 33	AK310852|CCDC33|80125|coiled-coil domain containing 33	AK026821|CCDC33|80125|coiled-coil domain containing 33	NM_182791|CCDC33|80125|coiled-coil domain containing 33	BC025689|CCDC33|80125|coiled-coil domain containing 33
hg18_v1_chr1_-_25619863_25619991	0.399174	SOX2.p2	AB018644|RHCE|6006|Rh blood group, CcEe antigens	AB018645|RHCE|6006|Rh blood group, CcEe antigens	AB030388|RHCE|6006|Rh blood group, CcEe antigens	AB049753|RHCE|6006|Rh blood group, CcEe antigens	AF056965|RHCE|6006|Rh blood group, CcEe antigens	AF177938|RHD|6007|Rh blood group, D antigen	AM295506|RHCE|6006|Rh blood group, CcEe antigens	DQ178642|RHCE|6006|Rh blood group, CcEe antigens	DQ266353|RHCE|6006|Rh blood group, CcEe antigens	DQ266400|RHCE|6006|Rh blood group, CcEe antigens	DQ322275|RHCE|6006|Rh blood group, CcEe antigens	GU474431|RHCE|6006|Rh blood group, CcEe antigens	GU563377|RHCE|6006|Rh blood group, CcEe antigens	S57967|RHCE|6006|Rh blood group, CcEe antigens	X63096|RHCE|6006|Rh blood group, CcEe antigens	X63095|RHCE|6006|Rh blood group, CcEe antigens	AY603478|RHCE|6006|Rh blood group, CcEe antigens	X63098|RHCE|6006|Rh blood group, CcEe antigens	Z97026|RHD|6007|Rh blood group, D antigen	BC075081|RHCE|6006|Rh blood group, CcEe antigens	M34015|RHCE|6006|Rh blood group, CcEe antigens	AF312679|RHD|6007|Rh blood group, D antigen	AF510065|RHCE|6006|Rh blood group, CcEe antigens	AF510066|RHCE|6006|Rh blood group, CcEe antigens	AF510067|RHCE|6006|Rh blood group, CcEe antigens	AF510068|RHCE|6006|Rh blood group, CcEe antigens	X54534|RHCE|6006|Rh blood group, CcEe antigens	NM_020485|RHCE|6006|Rh blood group, CcEe antigens	NM_138616|RHCE|6006|Rh blood group, CcEe antigens	NM_138617|RHCE|6006|Rh blood group, CcEe antigens	NM_138618|RHCE|6006|Rh blood group, CcEe antigens	BC139905|RHCE|6006|Rh blood group, CcEe antigens
hg18_v1_chr13_-_98428244_98428338	0.398871	SOX2.p2	AB028981|DOCK9|23348|dedicator of cytokinesis 9	CR936820|DOCK9|23348|dedicator of cytokinesis 9	AK126492|DOCK9|23348|dedicator of cytokinesis 9	NM_001130048|DOCK9|23348|dedicator of cytokinesis 9	NM_001130050|DOCK9|23348|dedicator of cytokinesis 9
hg18_v1_chr7_-_148356433_148356543	0.396524	SOX2.p2	DQ893573|PDIA4|9601|protein disulfide isomerase family A, member 4	DQ894347|PDIA4|9601|protein disulfide isomerase family A, member 4	BC000425|PDIA4|9601|protein disulfide isomerase family A, member 4	BC001928|PDIA4|9601|protein disulfide isomerase family A, member 4	AK290971|PDIA4|9601|protein disulfide isomerase family A, member 4
hg18_v1_chr22_-_48865907_48865956	0.394028	SOX2.p2	NM_139202|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1	AK297341|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1
hg18_v1_chr5_-_138746840_138746901	0.393957	SOX2.p2	AF058317|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1	AJ269477|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1	AK290789|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1	AF170911|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1	BC050261|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1	AK300935|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1	AF098277|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1	AK298337|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1	AJ250807|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1	BC019225|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1
hg18_v1_chr16_-_45339605_45339721	0.392731	SOX2.p2	AB451455|MYLK3|91807|myosin light chain kinase 3	BC109096|MYLK3|91807|myosin light chain kinase 3	BC109097|MYLK3|91807|myosin light chain kinase 3	AJ247087|MYLK3|91807|myosin light chain kinase 3	NM_182493|MYLK3|91807|myosin light chain kinase 3
hg18_v1_chr5_+_140181405_140181544	0.391897	SOX2.p2	BC033735|PCDHA5|56143|protocadherin alpha 5	AF152313|PCDHA5|56143|protocadherin alpha 5	AF152483|PCDHA5|56143|protocadherin alpha 5	NM_018908|PCDHA5|56143|protocadherin alpha 5	NM_031501|PCDHA5|56143|protocadherin alpha 5
hg18_v1_chr11_-_10786095_10786206	0.386054	SOX2.p2	BC065276|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	NM_001172705|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	BX647799|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	AK123338|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2
hg18_v1_chr1_-_51560469_51560525	0.38598	SOX2.p2	BC028374|TTC39A|22996|tetratricopeptide repeat domain 39A	NM_001080494|TTC39A|22996|tetratricopeptide repeat domain 39A
hg18_v1_chr15_-_81667773_81667828	0.384957	SOX2.p2	BC040554|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3
hg18_v1_chr2_-_160181206_160181325	0.3846	SOX2.p2	BX647250|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B	AL834381|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B	NM_013450|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B	AB040909|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B
hg18_v1_chr1_+_154855709_154855912	0.383324	SOX2.p2	AB049054|HAPLN2|60484|hyaluronan and proteoglycan link protein 2	NM_021817|HAPLN2|60484|hyaluronan and proteoglycan link protein 2	AK294131|HAPLN2|60484|hyaluronan and proteoglycan link protein 2	AK310758|HAPLN2|60484|hyaluronan and proteoglycan link protein 2	AK308805|HAPLN2|60484|hyaluronan and proteoglycan link protein 2	AK090712|HAPLN2|60484|hyaluronan and proteoglycan link protein 2	AK308980|HAPLN2|60484|hyaluronan and proteoglycan link protein 2	AK293797|HAPLN2|60484|hyaluronan and proteoglycan link protein 2	BC029864|HAPLN2|60484|hyaluronan and proteoglycan link protein 2
hg18_v1_chr1_+_145841569_145841569	0.382755	SOX2.p2	NM_005267|GJA8|2703|gap junction protein, alpha 8, 50kDa
hg18_v1_chr22_-_48865980_48866160	0.381399	SOX2.p2	AK295106|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1	AK299841|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1	AF319633|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1	D25217|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1
hg18_v1_chr1_-_143708467_143708467	0.380751	SOX2.p2	NM_001195260|PDE4DIP|9659|phosphodiesterase 4D interacting protein
hg18_v1_chrX_+_12903145_12903177	0.378864	SOX2.p2	BC107789|TMSB4X|7114|thymosin beta 4, X-linked	NM_183049|TMSL3|7117|thymosin-like 3	NM_021109|TMSB4X|7114|thymosin beta 4, X-linked	M17733|TMSB4X|7114|thymosin beta 4, X-linked	AK055976|TMSB4X|7114|thymosin beta 4, X-linked	AK057827|TMSB4X|7114|thymosin beta 4, X-linked	AK311747|TMSB4X|7114|thymosin beta 4, X-linked	BC016732|TMSB4X|7114|thymosin beta 4, X-linked	BC022857|TMSB4X|7114|thymosin beta 4, X-linked	BC062436|TMSB4X|7114|thymosin beta 4, X-linked	BC070248|TMSB4X|7114|thymosin beta 4, X-linked	BC070249|TMSB4X|7114|thymosin beta 4, X-linked	BC083509|TMSB4X|7114|thymosin beta 4, X-linked	BC092437|TMSB4X|7114|thymosin beta 4, X-linked	BC104666|TMSB4X|7114|thymosin beta 4, X-linked	BC061586|TMSB4X|7114|thymosin beta 4, X-linked	BC151215|TMSB4X|7114|thymosin beta 4, X-linked	BC139925|TMSB4X|7114|thymosin beta 4, X-linked	CR621963|TMSL3|7117|thymosin-like 3	CR624038|TMSL3|7117|thymosin-like 3	BC101790|TMSB4X|7114|thymosin beta 4, X-linked	BC101792|TMSB4X|7114|thymosin beta 4, X-linked	BC001631|TMSB4X|7114|thymosin beta 4, X-linked	BC064954|TMSB4X|7114|thymosin beta 4, X-linked	BC128103|TMSB4X|7114|thymosin beta 4, X-linked	BC141975|TMSB4X|7114|thymosin beta 4, X-linked	BC141976|TMSB4X|7114|thymosin beta 4, X-linked	BC128102|TMSB4X|7114|thymosin beta 4, X-linked
hg18_v1_chr7_+_139175420_139175703	0.375673	SOX2.p2	NM_001061|TBXAS1|6916|thromboxane A synthase 1 (platelet)	NM_001166253|TBXAS1|6916|thromboxane A synthase 1 (platelet)	NM_030984|TBXAS1|6916|thromboxane A synthase 1 (platelet)	BC041157|TBXAS1|6916|thromboxane A synthase 1 (platelet)	CR625096|TBXAS1|6916|thromboxane A synthase 1 (platelet)	AK296069|TBXAS1|6916|thromboxane A synthase 1 (platelet)	AK301164|TBXAS1|6916|thromboxane A synthase 1 (platelet)	AK303440|TBXAS1|6916|thromboxane A synthase 1 (platelet)	AK301049|TBXAS1|6916|thromboxane A synthase 1 (platelet)	M74055|TBXAS1|6916|thromboxane A synthase 1 (platelet)	S60133|TBXAS1|6916|thromboxane A synthase 1 (platelet)
hg18_v1_chr16_-_4792857_4792951	0.374898	SOX2.p2	CR603174|ROGDI|79641|rogdi homolog (Drosophila)
hg18_v1_chr8_+_21833111_21833160	0.373273	SOX2.p2	NM_015024|XPO7|23039|exportin 7	BC030785|XPO7|23039|exportin 7
hg18_v1_chr17_+_24598000_24598007	0.372673	SOX2.p2	NM_005208|CRYBA1|1411|crystallin, beta A1	BC113693|CRYBA1|1411|crystallin, beta A1	BC069537|CRYBA1|1411|crystallin, beta A1
hg18_v1_chr4_-_72868598_72868805	0.370265	SOX2.p2	CR624576|GC|2638|group-specific component (vitamin D binding protein)	CR615579|GC|2638|group-specific component (vitamin D binding protein)	CR592599|GC|2638|group-specific component (vitamin D binding protein)	CR597042|GC|2638|group-specific component (vitamin D binding protein)	CR600650|GC|2638|group-specific component (vitamin D binding protein)	CR615455|GC|2638|group-specific component (vitamin D binding protein)	CR618111|GC|2638|group-specific component (vitamin D binding protein)	CR589987|GC|2638|group-specific component (vitamin D binding protein)	CR604515|GC|2638|group-specific component (vitamin D binding protein)	CR615226|GC|2638|group-specific component (vitamin D binding protein)	CR625283|GC|2638|group-specific component (vitamin D binding protein)	CR593132|GC|2638|group-specific component (vitamin D binding protein)	CR612125|GC|2638|group-specific component (vitamin D binding protein)	CR625359|GC|2638|group-specific component (vitamin D binding protein)	CR626806|GC|2638|group-specific component (vitamin D binding protein)	CR605798|GC|2638|group-specific component (vitamin D binding protein)	CR611556|GC|2638|group-specific component (vitamin D binding protein)	CR623633|GC|2638|group-specific component (vitamin D binding protein)	CR591786|GC|2638|group-specific component (vitamin D binding protein)	CR598387|GC|2638|group-specific component (vitamin D binding protein)	CR599900|GC|2638|group-specific component (vitamin D binding protein)	CR600738|GC|2638|group-specific component (vitamin D binding protein)	CR601461|GC|2638|group-specific component (vitamin D binding protein)	CR606955|GC|2638|group-specific component (vitamin D binding protein)	CR622285|GC|2638|group-specific component (vitamin D binding protein)	CR591437|GC|2638|group-specific component (vitamin D binding protein)	AK290827|GC|2638|group-specific component (vitamin D binding protein)	AK298433|GC|2638|group-specific component (vitamin D binding protein)	AK312971|GC|2638|group-specific component (vitamin D binding protein)	BC057228|GC|2638|group-specific component (vitamin D binding protein)	BC022310|GC|2638|group-specific component (vitamin D binding protein)	NM_000583|GC|2638|group-specific component (vitamin D binding protein)	X03178|GC|2638|group-specific component (vitamin D binding protein)	CR602970|GC|2638|group-specific component (vitamin D binding protein)	AK315853|GC|2638|group-specific component (vitamin D binding protein)
hg18_v1_chr5_-_138746917_138746937	0.370037	SOX2.p2	NM_005847|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1	NM_152685|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1
hg18_v1_chrX_-_134013644_134013946	0.369582	SOX2.p2	BC008096|FAM127B|26071|family with sequence similarity 127, member B	BC071991|FAM127B|26071|family with sequence similarity 127, member B	AL117556|FAM127B|26071|family with sequence similarity 127, member B	BC000393|FAM127B|26071|family with sequence similarity 127, member B	BC019300|FAM127B|26071|family with sequence similarity 127, member B	CR601523|FAM127B|26071|family with sequence similarity 127, member B	NM_001078172|FAM127B|26071|family with sequence similarity 127, member B	NM_001134321|FAM127B|26071|family with sequence similarity 127, member B
hg18_v1_chr2_+_203207912_203207957	0.368532	SOX2.p2	AK096090|FAM117B|150864|family with sequence similarity 117, member B
hg18_v1_chr3_-_47932479_47932615	0.3664	SOX2.p2	
hg18_v1_chr1_+_111215343_111215361	0.365928	SOX2.p2	NM_001040033|CD53|963|CD53 molecule	BC035456|CD53|963|CD53 molecule
hg18_v1_chr6_+_111242516_111242536	0.365281	SOX2.p2	AK304351|AMD1|262|adenosylmethionine decarboxylase 1
hg18_v1_chr7_-_26198673_26198679	0.364506	SOX2.p2	BX538099|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1
hg18_v1_chr7_-_148356697_148356714	0.36394	SOX2.p2	NM_004911|PDIA4|9601|protein disulfide isomerase family A, member 4
hg18_v1_chr3_+_38238080_38238094	0.363226	SOX2.p2	AF087893|OXSR1|9943|oxidative-stress responsive 1
hg18_v1_chr1_+_36121403_36121609	0.358777	SOX2.p2	AK314148|EIF2C1|26523|eukaryotic translation initiation factor 2C, 1
hg18_v1_chr1_-_199259133_199259221	0.358254	SOX2.p2	AM177180|KIF21B|23046|kinesin family member 21B	BC137281|KIF21B|23046|kinesin family member 21B	BC144557|KIF21B|23046|kinesin family member 21B
hg18_v1_chr7_+_142270634_142270640	0.358003	SOX2.p2	BC110606|EPHB6|2051|EPH receptor B6	BC110607|EPHB6|2051|EPH receptor B6
hg18_v1_chr11_-_118739838_118740067	0.35761	SOX2.p2	AF079564|USP2|9099|ubiquitin specific peptidase 2	AK301805|USP2|9099|ubiquitin specific peptidase 2	AK292255|USP2|9099|ubiquitin specific peptidase 2
hg18_v1_chr22_-_48865864_48865869	0.357569	SOX2.p2	BC028425|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1	BC070042|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1
hg18_v1_chr6_-_134415311_134415481	0.357482	SOX2.p2	AK226098|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12	BC070149|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12	AY046419|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12	AL833602|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12	AK122628|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12	BX648889|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12	NM_145176|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12
hg18_v1_chr1_+_109450116_109450221	0.356859	SOX2.p2	
hg18_v1_chr5_-_168204430_168204444	0.356462	SOX2.p2	
hg18_v1_chr5_-_160211623_160211796	0.355275	SOX2.p2	AB018258|ATP10B|23120|ATPase, class V, type 10B	AK295081|ATP10B|23120|ATPase, class V, type 10B	AK090832|ATP10B|23120|ATPase, class V, type 10B	NM_025153|ATP10B|23120|ATPase, class V, type 10B
hg18_v1_chr15_+_50098700_50098723	0.354657	SOX2.p2	NM_002748|MAPK6|5597|mitogen-activated protein kinase 6
hg18_v1_chr14_-_46882144_46882187	0.353064	SOX2.p2	BC028193|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2	NM_182830|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2
hg18_v1_chr12_+_56230110_56230318	0.352925	SOX2.p2	BC146670|KIF5A|3798|kinesin family member 5A	BC150208|KIF5A|3798|kinesin family member 5A	NM_004984|KIF5A|3798|kinesin family member 5A	U06698|KIF5A|3798|kinesin family member 5A	AB210045|KIF5A|3798|kinesin family member 5A
hg18_v1_chr11_-_57173823_57173992	0.352117	SOX2.p2	BC029228|YPEL4|219539|yippee-like 4 (Drosophila)	BC104781|YPEL4|219539|yippee-like 4 (Drosophila)	BC112119|YPEL4|219539|yippee-like 4 (Drosophila)	BC064995|YPEL4|219539|yippee-like 4 (Drosophila)	AB098738|YPEL4|219539|yippee-like 4 (Drosophila)	AK054775|YPEL4|219539|yippee-like 4 (Drosophila)	AK124577|YPEL4|219539|yippee-like 4 (Drosophila)	NM_145008|YPEL4|219539|yippee-like 4 (Drosophila)
hg18_v1_chr16_+_55373241_55373268	0.351949	SOX2.p2	AK056637|NUP93|9688|nucleoporin 93kDa
hg18_v1_chr12_+_43972732_43972732	0.350665	SOX2.p2	AL832340|ANO6|196527|anoctamin 6	NM_001142678|ANO6|196527|anoctamin 6
hg18_v1_chr11_-_118740069_118740116	0.348147	SOX2.p2	AF440755|USP2|9099|ubiquitin specific peptidase 2	NM_171997|USP2|9099|ubiquitin specific peptidase 2
hg18_v1_chr5_+_132037271_132037271	0.347484	SOX2.p2	NM_000589|IL4|3565|interleukin 4	NM_172348|IL4|3565|interleukin 4
hg18_v1_chr21_-_36870736_36870736	0.346857	SOX2.p2	AJ566766|CLDN14|23562|claudin 14	NM_001146077|CLDN14|23562|claudin 14
hg18_v1_chr11_-_123816190_123816263	0.346419	SOX2.p2	AF238488|OR8B8|26493|olfactory receptor, family 8, subfamily B, member 8	NM_012378|OR8B8|26493|olfactory receptor, family 8, subfamily B, member 8	BC130393|OR8B8|26493|olfactory receptor, family 8, subfamily B, member 8	BC130419|OR8B8|26493|olfactory receptor, family 8, subfamily B, member 8
hg18_v1_chr1_+_84540921_84540921	0.34634	SOX2.p2	BC037973|SAMD13|148418|sterile alpha motif domain containing 13	NM_001134664|SAMD13|148418|sterile alpha motif domain containing 13
hg18_v1_chr3_-_99236520_99236520	0.346008	SOX2.p2	NM_001105580|GABRR3|200959|gamma-aminobutyric acid (GABA) receptor, rho 3
hg18_v1_chr19_-_47498768_47498794	0.345716	SOX2.p2	NM_001145939|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)	NM_001145940|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)
hg18_v1_chr5_-_75044001_75044035	0.344488	SOX2.p2	BC101325|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)	AK093098|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)	BC101326|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)	BC101327|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)	BC101328|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)	NM_152408|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)
hg18_v1_chr1_-_166149867_166150076	0.343975	SOX2.p2	BC117366|ADCY10|55811|adenylate cyclase 10 (soluble)	BC117372|ADCY10|55811|adenylate cyclase 10 (soluble)	AF176813|ADCY10|55811|adenylate cyclase 10 (soluble)	AF299350|ADCY10|55811|adenylate cyclase 10 (soluble)	AF331033|ADCY10|55811|adenylate cyclase 10 (soluble)	AK310395|ADCY10|55811|adenylate cyclase 10 (soluble)	AK310531|ADCY10|55811|adenylate cyclase 10 (soluble)	AK302884|ADCY10|55811|adenylate cyclase 10 (soluble)	NM_001167749|ADCY10|55811|adenylate cyclase 10 (soluble)	NM_018417|ADCY10|55811|adenylate cyclase 10 (soluble)
hg18_v1_chr1_-_149698516_149698594	0.343591	SOX2.p2	AJ242979|POGZ|23126|pogo transposable element with ZNF domain	BX537838|POGZ|23126|pogo transposable element with ZNF domain	NM_001194937|POGZ|23126|pogo transposable element with ZNF domain	NM_001194938|POGZ|23126|pogo transposable element with ZNF domain	NM_015100|POGZ|23126|pogo transposable element with ZNF domain	NM_145796|POGZ|23126|pogo transposable element with ZNF domain
hg18_v1_chr17_-_35017650_35017686	0.34014	SOX2.p2	CR624963|NEUROD2|4761|neurogenic differentiation 2	CR590531|NEUROD2|4761|neurogenic differentiation 2
hg18_v1_chr1_-_232810443_232810465	0.34002	SOX2.p2	
hg18_v1_chr15_-_99609197_99609321	0.339746	SOX2.p2	AB071402|CHSY1|22856|chondroitin sulfate synthase 1
hg18_v1_chr7_+_116380590_116380653	0.338637	SOX2.p2	BC075855|ST7|7982|suppression of tumorigenicity 7	NM_018412|ST7|7982|suppression of tumorigenicity 7	NM_021908|ST7|7982|suppression of tumorigenicity 7	AF234882|ST7|7982|suppression of tumorigenicity 7	AF234883|ST7|7982|suppression of tumorigenicity 7
hg18_v1_chr17_-_59817722_59817742	0.338279	SOX2.p2	BC022512|PECAM1|5175|platelet/endothelial cell adhesion molecule	BC051822|PECAM1|5175|platelet/endothelial cell adhesion molecule	NM_000442|PECAM1|5175|platelet/endothelial cell adhesion molecule
hg18_v1_chr11_+_10439253_10439262	0.338146	SOX2.p2	NM_001172430|AMPD3|272|adenosine monophosphate deaminase 3	AK302970|AMPD3|272|adenosine monophosphate deaminase 3
hg18_v1_chr10_+_17310475_17310610	0.337979	SOX2.p2	BC066956|VIM|7431|vimentin
hg18_v1_chr17_+_34114924_34115326	0.334673	SOX2.p2	BC064612|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6
hg18_v1_chr12_+_7348194_7348194	0.334619	SOX2.p2	NM_001080454|ACSM4|341392|acyl-CoA synthetase medium-chain family member 4
hg18_v1_chr6_+_89847019_89847181	0.334212	SOX2.p2	CR618392|PNRC1|10957|proline-rich nuclear receptor coactivator 1	NM_006813|PNRC1|10957|proline-rich nuclear receptor coactivator 1
hg18_v1_chr5_+_176494690_176494747	0.333749	SOX2.p2	AF322907|NSD1|64324|nuclear receptor binding SET domain protein 1	AY049721|NSD1|64324|nuclear receptor binding SET domain protein 1	BC144629|NSD1|64324|nuclear receptor binding SET domain protein 1	BC150628|NSD1|64324|nuclear receptor binding SET domain protein 1	BC139789|NSD1|64324|nuclear receptor binding SET domain protein 1
hg18_v1_chr1_-_232810478_232810484	0.33364	SOX2.p2	
hg18_v1_chr12_-_31635089_31635281	0.331863	SOX2.p2	BC068580|DENND5B|160518|DENN/MADD domain containing 5B	NM_144973|DENND5B|160518|DENN/MADD domain containing 5B
hg18_v1_chr11_-_72057755_72057755	0.331403	SOX2.p2	AY495087|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated	NM_001146209|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated
hg18_v1_chr15_+_50098730_50098776	0.330747	SOX2.p2	BC035492|MAPK6|5597|mitogen-activated protein kinase 6
hg18_v1_chr10_-_25281510_25281567	0.330686	SOX2.p2	AF226056|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	CR615591|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	AB209792|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	AK222674|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	AK294130|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	AK021950|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	NM_020200|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	BC008662|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	AK309614|PRTFDC1|56952|phosphoribosyl transferase domain containing 1
hg18_v1_chr10_-_75080784_75080805	0.330445	SOX2.p2	BC142635|SYNPO2L|79933|synaptopodin 2-like	BC131776|SYNPO2L|79933|synaptopodin 2-like	AK022983|SYNPO2L|79933|synaptopodin 2-like	NM_024875|SYNPO2L|79933|synaptopodin 2-like
hg18_v1_chr7_+_44754978_44755054	0.330185	SOX2.p2	AK090415|ZMIZ2|83637|zinc finger, MIZ-type containing 2	NM_031449|ZMIZ2|83637|zinc finger, MIZ-type containing 2
hg18_v1_chr18_+_27281729_27281755	0.329842	SOX2.p2	AK290367|DSG3|1830|desmoglein 3	NM_001944|DSG3|1830|desmoglein 3	M76482|DSG3|1830|desmoglein 3
hg18_v1_chr10_+_88975184_88975236	0.328791	SOX2.p2	BC092519|FAM22A|728118|family with sequence similarity 22, member A	NM_001099338|FAM22A|728118|family with sequence similarity 22, member A	AB095940|FAM22D|728130|family with sequence similarity 22, member D
hg18_v1_chr1_+_183281173_183281321	0.328786	SOX2.p2	NM_007212|RNF2|6045|ring finger protein 2	AF141327|RNF2|6045|ring finger protein 2	CR597914|RNF2|6045|ring finger protein 2	AK091574|RNF2|6045|ring finger protein 2	BC012583|RNF2|6045|ring finger protein 2	AK314793|RNF2|6045|ring finger protein 2
hg18_v1_chr11_+_10786137_10786218	0.326883	SOX2.p2	AK055888|LOC144017|144017|hypothetical protein LOC144017
hg18_v1_chr5_-_32439067_32439153	0.326646	SOX2.p2	BC062986|ZFR|51663|zinc finger RNA binding protein	BC051893|ZFR|51663|zinc finger RNA binding protein
hg18_v1_chr1_-_31154023_31154247	0.325096	SOX2.p2	AF248634|SDC3|9672|syndecan 3	NM_014654|SDC3|9672|syndecan 3
hg18_v1_chr11_-_60880799_60880936	0.322735	SOX2.p2	AK225754|CYBASC3|220002|cytochrome b, ascorbate dependent 3	AK310167|CYBASC3|220002|cytochrome b, ascorbate dependent 3	NM_001161452|CYBASC3|220002|cytochrome b, ascorbate dependent 3
hg18_v1_chr3_+_190831909_190831998	0.322706	SOX2.p2	BC039815|TP63|8626|tumor protein p63	NM_001114978|TP63|8626|tumor protein p63	NM_001114979|TP63|8626|tumor protein p63	NM_003722|TP63|8626|tumor protein p63	AB016072|TP63|8626|tumor protein p63	AB016073|TP63|8626|tumor protein p63	AF116771|TP63|8626|tumor protein p63	Y16961|TP63|8626|tumor protein p63	EU446669|TP63|8626|tumor protein p63
hg18_v1_chr7_+_73341640_73341807	0.322236	SOX2.p2	AB006629|CLIP2|7461|CAP-GLY domain containing linker protein 2	BC150332|CLIP2|7461|CAP-GLY domain containing linker protein 2	NM_003388|CLIP2|7461|CAP-GLY domain containing linker protein 2	NM_032421|CLIP2|7461|CAP-GLY domain containing linker protein 2
hg18_v1_chr22_+_38627031_38627109	0.322106	SOX2.p2	AY069959|GRAP2|9402|GRB2-related adaptor protein 2	NM_004810|GRAP2|9402|GRB2-related adaptor protein 2	AK303332|GRAP2|9402|GRB2-related adaptor protein 2	AK303512|GRAP2|9402|GRB2-related adaptor protein 2	AF236119|GRAP2|9402|GRB2-related adaptor protein 2	CR604186|GRAP2|9402|GRB2-related adaptor protein 2	AJ011736|GRAP2|9402|GRB2-related adaptor protein 2	BC025692|GRAP2|9402|GRB2-related adaptor protein 2	AF042380|GRAP2|9402|GRB2-related adaptor protein 2	AF102694|GRAP2|9402|GRB2-related adaptor protein 2
hg18_v1_chr10_-_21475493_21475493	0.321894	SOX2.p2	BC140744|C10orf113|387638|chromosome 10 open reading frame 113	BC144447|C10orf113|387638|chromosome 10 open reading frame 113	NM_001010896|C10orf113|387638|chromosome 10 open reading frame 113	NM_001177483|C10orf113|387638|chromosome 10 open reading frame 113
hg18_v1_chr9_+_95886625_95886645	0.32138	SOX2.p2	AK124912|PTPDC1|138639|protein tyrosine phosphatase domain containing 1
hg18_v1_chr1_+_25471470_25471688	0.321052	SOX2.p2	AK297151|RHD|6007|Rh blood group, D antigen	NM_001127691|RHD|6007|Rh blood group, D antigen	NM_016124|RHD|6007|Rh blood group, D antigen	X63094|RHD|6007|Rh blood group, D antigen	BC139922|RHD|6007|Rh blood group, D antigen	AF510069|RHD|6007|Rh blood group, D antigen	AF510070|RHD|6007|Rh blood group, D antigen	AF312679|RHD|6007|Rh blood group, D antigen	Z97026|RHD|6007|Rh blood group, D antigen	DQ451878|RHD|6007|Rh blood group, D antigen	X63097|RHD|6007|Rh blood group, D antigen	AB018966|RHD|6007|Rh blood group, D antigen	AB018967|RHD|6007|Rh blood group, D antigen	AB018968|RHD|6007|Rh blood group, D antigen	AB018969|RHD|6007|Rh blood group, D antigen	AB037270|RHD|6007|Rh blood group, D antigen	AB046420|RHD|6007|Rh blood group, D antigen	AB049754|RHD|6007|Rh blood group, D antigen	AF037626|RHD|6007|Rh blood group, D antigen	AF177938|RHD|6007|Rh blood group, D antigen	AF187846|RHD|6007|Rh blood group, D antigen	AJ704215|RHD|6007|Rh blood group, D antigen	AM183924|RHD|6007|Rh blood group, D antigen	AY449381|RHD|6007|Rh blood group, D antigen	AY449382|RHD|6007|Rh blood group, D antigen	AY449383|RHD|6007|Rh blood group, D antigen	AY449384|RHD|6007|Rh blood group, D antigen	AY449385|RHD|6007|Rh blood group, D antigen	AY751491|RHD|6007|Rh blood group, D antigen	AY751492|RHD|6007|Rh blood group, D antigen	AY751493|RHD|6007|Rh blood group, D antigen	AY751494|RHD|6007|Rh blood group, D antigen	AY751495|RHD|6007|Rh blood group, D antigen	AY751496|RHD|6007|Rh blood group, D antigen	L08429|RHD|6007|Rh blood group, D antigen	S57971|RHD|6007|Rh blood group, D antigen	S70174|RHD|6007|Rh blood group, D antigen	S73913|RHD|6007|Rh blood group, D antigen	S78509|RHD|6007|Rh blood group, D antigen	S82449|RHD|6007|Rh blood group, D antigen	EU557240|RHD|6007|Rh blood group, D antigen	EU557241|RHD|6007|Rh blood group, D antigen	EU661905|RHD|6007|Rh blood group, D antigen	EU661906|RHD|6007|Rh blood group, D antigen
hg18_v1_chr5_-_39460687_39460730	0.320818	SOX2.p2	BC003064|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)	U53446|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)
hg18_v1_chr12_+_92595281_92595348	0.320725	SOX2.p2	NM_003805|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain	AK296225|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain	AK314861|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain	U79115|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain	BC017042|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain	U84388|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain
hg18_v1_chr10_+_49184658_49184926	0.320716	SOX2.p2	CR614448|MAPK8|5599|mitogen-activated protein kinase 8	AK292523|MAPK8|5599|mitogen-activated protein kinase 8
hg18_v1_chr1_-_180822686_180822730	0.319445	SOX2.p2	BC114433|RNASEL|6041|ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent)	BC115697|RNASEL|6041|ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent)	NM_021133|RNASEL|6041|ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent)
hg18_v1_chr8_+_67201684_67202105	0.318157	SOX2.p2	AK091310|TRIM55|84675|tripartite motif containing 55	AJ243488|TRIM55|84675|tripartite motif containing 55	AJ243489|TRIM55|84675|tripartite motif containing 55	AJ277493|TRIM55|84675|tripartite motif containing 55	AJ431704|TRIM55|84675|tripartite motif containing 55	NM_033058|TRIM55|84675|tripartite motif containing 55	NM_184085|TRIM55|84675|tripartite motif containing 55	NM_184086|TRIM55|84675|tripartite motif containing 55	NM_184087|TRIM55|84675|tripartite motif containing 55	AJ291712|TRIM55|84675|tripartite motif containing 55	BC007750|TRIM55|84675|tripartite motif containing 55	AK091728|TRIM55|84675|tripartite motif containing 55	BT007212|TRIM55|84675|tripartite motif containing 55
hg18_v1_chr12_-_106678910_106679029	0.317943	SOX2.p2	AK056378|PRDM4|11108|PR domain containing 4
hg18_v1_chr2_-_37752272_37752294	0.317771	SOX2.p2	AK128735|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3	BC019270|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3	AK313483|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3
hg18_v1_chr1_-_219977424_219977424	0.31761	SOX2.p2	NM_144728|DUSP10|11221|dual specificity phosphatase 10
hg18_v1_chr3_+_123526700_123526829	0.317323	SOX2.p2	NM_005213|CSTA|1475|cystatin A (stefin A)	AK291308|CSTA|1475|cystatin A (stefin A)	BC010379|CSTA|1475|cystatin A (stefin A)	X05978|CSTA|1475|cystatin A (stefin A)	CR456914|CSTA|1475|cystatin A (stefin A)
hg18_v1_chr1_-_52791309_52791374	0.317305	SOX2.p2	BC012047|ZCCHC11|23318|zinc finger, CCHC domain containing 11	BC018753|ZCCHC11|23318|zinc finger, CCHC domain containing 11	BC035820|ZCCHC11|23318|zinc finger, CCHC domain containing 11	NM_001009881|ZCCHC11|23318|zinc finger, CCHC domain containing 11	NM_015269|ZCCHC11|23318|zinc finger, CCHC domain containing 11	AK307579|ZCCHC11|23318|zinc finger, CCHC domain containing 11	AK095733|ZCCHC11|23318|zinc finger, CCHC domain containing 11
hg18_v1_chr10_-_13429397_13429798	0.317263	SOX2.p2	CR604492|SEPHS1|22929|selenophosphate synthetase 1
hg18_v1_chr17_-_74361620_74361680	0.317235	SOX2.p2	CR621263|TIMP2|7077|TIMP metallopeptidase inhibitor 2
hg18_v1_chr19_-_45016587_45016689	0.316892	SOX2.p2	AF205861|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	BC025291|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	AK074971|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	BC009688|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	AK302127|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	BC018751|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	NM_004714|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	NM_006483|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	NM_006484|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	Y17999|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B
hg18_v1_chr22_-_21814208_21814279	0.316287	SOX2.p2	BC008986|RTDR1|27156|rhabdoid tumor deletion region gene 1	AF133587|RTDR1|27156|rhabdoid tumor deletion region gene 1	NM_014433|RTDR1|27156|rhabdoid tumor deletion region gene 1	AK299530|RTDR1|27156|rhabdoid tumor deletion region gene 1	AK310327|RTDR1|27156|rhabdoid tumor deletion region gene 1
hg18_v1_chr16_-_22293097_22293496	0.314986	SOX2.p2	DQ892203|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	DQ892204|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	DQ895399|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	D12981|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	AK292273|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	M63256|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	BC017503|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	NM_001802|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa
hg18_v1_chr4_+_115762971_115762971	0.314764	SOX2.p2	NM_003360|UGT8|7368|UDP glycosyltransferase 8	U30930|UGT8|7368|UDP glycosyltransferase 8
hg18_v1_chr6_-_11340886_11340886	0.314323	SOX2.p2	L43821|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9
hg18_v1_chr10_+_97461525_97461525	0.313862	SOX2.p2	AJ133133|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	AJ133134|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001098175|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1
hg18_v1_chr2_-_160765008_160765075	0.312417	SOX2.p2	AK304203|ITGB6|3694|integrin, beta 6	AL831998|ITGB6|3694|integrin, beta 6	AK290300|ITGB6|3694|integrin, beta 6	AK313944|ITGB6|3694|integrin, beta 6
hg18_v1_chr19_+_44785003_44785047	0.312335	SOX2.p2	BC066304|LGALS13|29124|lectin, galactoside-binding, soluble, 13	AY055826|LGALS13|29124|lectin, galactoside-binding, soluble, 13	BC069312|LGALS13|29124|lectin, galactoside-binding, soluble, 13	NM_013268|LGALS13|29124|lectin, galactoside-binding, soluble, 13	FJ613336|LGALS13|29124|lectin, galactoside-binding, soluble, 13	FJ613337|LGALS13|29124|lectin, galactoside-binding, soluble, 13	FJ613338|LGALS13|29124|lectin, galactoside-binding, soluble, 13	AF117383|LGALS13|29124|lectin, galactoside-binding, soluble, 13
hg18_v1_chr7_-_99536214_99536321	0.307535	SOX2.p2	AK055379|MCM7|4176|minichromosome maintenance complex component 7	NM_182776|MCM7|4176|minichromosome maintenance complex component 7
hg18_v1_chr7_-_148356664_148356688	0.306989	SOX2.p2	BC006344|PDIA4|9601|protein disulfide isomerase family A, member 4	BC011754|PDIA4|9601|protein disulfide isomerase family A, member 4	AK313299|PDIA4|9601|protein disulfide isomerase family A, member 4
hg18_v1_chr22_-_17798998_17799102	0.306505	SOX2.p2	CU013101|HIRA|7290|HIR histone cell cycle regulation defective homolog A (S. cerevisiae)	CU013389|HIRA|7290|HIR histone cell cycle regulation defective homolog A (S. cerevisiae)	CR456503|HIRA|7290|HIR histone cell cycle regulation defective homolog A (S. cerevisiae)	X81844|HIRA|7290|HIR histone cell cycle regulation defective homolog A (S. cerevisiae)
hg18_v1_chr6_-_10523424_10523485	0.306474	SOX2.p2	BC071713|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)	CR601719|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)	NM_003220|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)
hg18_v1_chr11_-_64484184_64484184	0.305987	SOX2.p2	BC106951|C11orf85|283129|chromosome 11 open reading frame 85	BC106952|C11orf85|283129|chromosome 11 open reading frame 85	NM_001037225|C11orf85|283129|chromosome 11 open reading frame 85
hg18_v1_chr17_-_35017691_35017707	0.305153	SOX2.p2	BC022481|NEUROD2|4761|neurogenic differentiation 2	NM_006160|NEUROD2|4761|neurogenic differentiation 2
hg18_v1_chr5_+_143171918_143171984	0.304975	SOX2.p2	AF103884|HMHB1|57824|histocompatibility (minor) HB-1	NM_021182|HMHB1|57824|histocompatibility (minor) HB-1	BC096711|HMHB1|57824|histocompatibility (minor) HB-1	BC098145|HMHB1|57824|histocompatibility (minor) HB-1	BC098244|HMHB1|57824|histocompatibility (minor) HB-1	BC098251|HMHB1|57824|histocompatibility (minor) HB-1	BC104412|HMHB1|57824|histocompatibility (minor) HB-1	BC104413|HMHB1|57824|histocompatibility (minor) HB-1	BC113894|HMHB1|57824|histocompatibility (minor) HB-1	BC113971|HMHB1|57824|histocompatibility (minor) HB-1
hg18_v1_chr1_-_232810111_232810187	0.304903	SOX2.p2	BC020516|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2
hg18_v1_chr19_-_59476734_59476844	0.304647	SOX2.p2	BC036827|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2	AF283986|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2	AF025528|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2	BC025766|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2	AK297071|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2	AK226015|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2	AK297041|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2	NM_001080978|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2	NM_005874|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2
hg18_v1_chr12_+_67919583_67919618	0.303745	SOX2.p2	NM_007007|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	AK223568|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	AK299928|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa
hg18_v1_chr1_+_29113589_29113747	0.303259	SOX2.p2	NM_001166006|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)	BC039079|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)	AK310655|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)
hg18_v1_chr1_-_224563461_224563577	0.303217	SOX2.p2	AY786184|LIN9|286826|lin-9 homolog (C. elegans)	BC043444|LIN9|286826|lin-9 homolog (C. elegans)	BX537869|LIN9|286826|lin-9 homolog (C. elegans)	AK126177|LIN9|286826|lin-9 homolog (C. elegans)	AF190323|LIN9|286826|lin-9 homolog (C. elegans)	AF190324|LIN9|286826|lin-9 homolog (C. elegans)	AK308823|LIN9|286826|lin-9 homolog (C. elegans)
hg18_v1_chr1_+_165225121_165225212	0.303024	SOX2.p2	CR597287|MAEL|84944|maelstrom homolog (Drosophila)	AK302253|MAEL|84944|maelstrom homolog (Drosophila)	AK131066|MAEL|84944|maelstrom homolog (Drosophila)	DQ076156|MAEL|84944|maelstrom homolog (Drosophila)	AK027810|MAEL|84944|maelstrom homolog (Drosophila)	NM_032858|MAEL|84944|maelstrom homolog (Drosophila)	CR614428|MAEL|84944|maelstrom homolog (Drosophila)	CR624981|MAEL|84944|maelstrom homolog (Drosophila)	BC028595|MAEL|84944|maelstrom homolog (Drosophila)
hg18_v1_chr10_+_5976354_5976354	0.302959	SOX2.p2	AF380349|FBXO18|84893|F-box protein, helicase, 18	NM_032807|FBXO18|84893|F-box protein, helicase, 18
hg18_v1_chr20_-_48980858_48981403	0.301119	SOX2.p2	AF250860|ADNP|23394|activity-dependent neuroprotector homeobox	NM_015339|ADNP|23394|activity-dependent neuroprotector homeobox	NM_181442|ADNP|23394|activity-dependent neuroprotector homeobox	BC075794|ADNP|23394|activity-dependent neuroprotector homeobox
hg18_v1_chr1_+_38033666_38033746	0.299755	SOX2.p2	AK301399|MANEAL|149175|mannosidase, endo-alpha-like	AK055996|MANEAL|149175|mannosidase, endo-alpha-like	NM_152496|MANEAL|149175|mannosidase, endo-alpha-like
hg18_v1_chr2_-_74634569_74634595	0.299516	SOX2.p2	AF311313|LOXL3|84695|lysyl oxidase-like 3	NM_032603|LOXL3|84695|lysyl oxidase-like 3	AF284815|LOXL3|84695|lysyl oxidase-like 3	AF282619|LOXL3|84695|lysyl oxidase-like 3	AK309474|LOXL3|84695|lysyl oxidase-like 3
hg18_v1_chr3_+_69895310_69895396	0.299137	SOX2.p2	AK296129|MITF|4286|microphthalmia-associated transcription factor	NM_001184967|MITF|4286|microphthalmia-associated transcription factor
hg18_v1_chr12_-_120270035_120270066	0.298695	SOX2.p2	BC034243|ANAPC5|51433|anaphase promoting complex subunit 5
hg18_v1_chr17_+_65582981_65583070	0.298603	SOX2.p2	BC030961|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	AF153815|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	AF153816|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	NM_018658|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	NM_170741|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	AK225944|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	AK290799|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16
hg18_v1_chrX_+_44588192_44588322	0.298426	SOX2.p2	AF533018|DUSP21|63904|dual specificity phosphatase 21	NM_022076|DUSP21|63904|dual specificity phosphatase 21	AF143321|DUSP21|63904|dual specificity phosphatase 21	AY121807|DUSP21|63904|dual specificity phosphatase 21	AY156515|DUSP21|63904|dual specificity phosphatase 21	BC119755|DUSP21|63904|dual specificity phosphatase 21	BC119756|DUSP21|63904|dual specificity phosphatase 21	CR457159|DUSP21|63904|dual specificity phosphatase 21
hg18_v1_chr10_+_11247059_11247146	0.298075	SOX2.p2	AK297313|CELF2|10659|CUGBP, Elav-like family member 2	AK299992|CELF2|10659|CUGBP, Elav-like family member 2	AF036956|CELF2|10659|CUGBP, Elav-like family member 2	AK293164|CELF2|10659|CUGBP, Elav-like family member 2	AF432906|CELF2|10659|CUGBP, Elav-like family member 2
hg18_v1_chr2_-_74455161_74455369	0.297963	SOX2.p2	AK315014|DCTN1|1639|dynactin 1	BC071583|DCTN1|1639|dynactin 1	NM_001135041|DCTN1|1639|dynactin 1	NM_023019|DCTN1|1639|dynactin 1
hg18_v1_chr1_-_156923111_156923129	0.297149	SOX2.p2	M61877|SPTA1|6708|spectrin, alpha, erythrocytic 1 (elliptocytosis 2)	NM_003126|SPTA1|6708|spectrin, alpha, erythrocytic 1 (elliptocytosis 2)
hg18_v1_chr2_+_108751033_108751198	0.297035	SOX2.p2	AY170822|RANBP2|5903|RAN binding protein 2
hg18_v1_chr9_+_102275455_102275646	0.296928	SOX2.p2	BC035056|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1	DQ891732|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1	DQ894909|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1
hg18_v1_chr11_-_111287657_111287749	0.296148	SOX2.p2	BT006770|CRYAB|1410|crystallin, alpha B	FJ876064|CRYAB|1410|crystallin, alpha B	AM392549|CRYAB|1410|crystallin, alpha B	AM393027|CRYAB|1410|crystallin, alpha B	DQ892517|CRYAB|1410|crystallin, alpha B	DQ895729|CRYAB|1410|crystallin, alpha B	AF007162|CRYAB|1410|crystallin, alpha B	NM_001885|CRYAB|1410|crystallin, alpha B	S45630|CRYAB|1410|crystallin, alpha B	AK314029|CRYAB|1410|crystallin, alpha B	BC007008|CRYAB|1410|crystallin, alpha B	AK295498|CRYAB|1410|crystallin, alpha B
hg18_v1_chr15_+_41672543_41672585	0.295839	SOX2.p2	NM_020990|CKMT1B|1159|creatine kinase, mitochondrial 1B	CR599511|CKMT1A|548596|creatine kinase, mitochondrial 1A	AK316124|CKMT1A|548596|creatine kinase, mitochondrial 1A
hg18_v1_chr1_-_52791218_52791292	0.295748	SOX2.p2	BC131734|ZCCHC11|23318|zinc finger, CCHC domain containing 11	BC048301|ZCCHC11|23318|zinc finger, CCHC domain containing 11
hg18_v1_chr2_+_12775814_12775883	0.295541	SOX2.p2	
hg18_v1_chr10_-_32707549_32707737	0.295325	SOX2.p2	AF286905|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)	AK309309|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)	AK299676|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)
hg18_v1_chr11_-_77730573_77730573	0.295238	SOX2.p2	AB011143|GAB2|9846|GRB2-associated binding protein 2	BC152459|GAB2|9846|GRB2-associated binding protein 2	NM_012296|GAB2|9846|GRB2-associated binding protein 2
hg18_v1_chr12_-_69434650_69434805	0.294883	SOX2.p2	BC092469|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	U77916|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	BX571751|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	AK304457|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	AK304672|PTPRR|5801|protein tyrosine phosphatase, receptor type, R
hg18_v1_chrX_+_84385693_84385791	0.293179	SOX2.p2	BC006349|ZNF711|7552|zinc finger protein 711	AK308097|ZNF711|7552|zinc finger protein 711
hg18_v1_chr1_+_203106600_203106612	0.293028	SOX2.p2	AK308686|NFASC|23114|neurofascin
hg18_v1_chrX_+_65152004_65152029	0.293025	SOX2.p2	
hg18_v1_chr4_+_110968594_110968607	0.293009	SOX2.p2	AF012270|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog	NM_006583|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog	BC128120|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog	BC128121|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog	BC128401|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog
hg18_v1_chrX_+_152562013_152562125	0.292789	SOX2.p2	BC034936|DUSP9|1852|dual specificity phosphatase 9	BC042166|DUSP9|1852|dual specificity phosphatase 9
hg18_v1_chr2_-_55053398_55053426	0.291654	SOX2.p2	
hg18_v1_chr1_+_180836050_180836088	0.290239	SOX2.p2	
hg18_v1_chr4_-_83569476_83569571	0.289747	SOX2.p2	D89678|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	AK300122|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	AY453824|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	AB066484|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR590310|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like
hg18_v1_chr22_+_38627129_38627258	0.28972	SOX2.p2	AF129476|GRAP2|9402|GRB2-related adaptor protein 2	AF090456|GRAP2|9402|GRB2-related adaptor protein 2	CR456498|GRAP2|9402|GRB2-related adaptor protein 2	Y18051|GRAP2|9402|GRB2-related adaptor protein 2
hg18_v1_chr4_-_74307637_74307650	0.288999	SOX2.p2	BX648035|ANKRD17|26057|ankyrin repeat domain 17	AK300302|ANKRD17|26057|ankyrin repeat domain 17
hg18_v1_chr14_+_19365447_19365447	0.288427	SOX2.p2	NM_001004723|OR4N2|390429|olfactory receptor, family 4, subfamily N, member 2
hg18_v1_chr12_+_48047428_48047895	0.287169	SOX2.p2	BC017767|SPATS2|65244|spermatogenesis associated, serine-rich 2	AL833614|SPATS2|65244|spermatogenesis associated, serine-rich 2	BC048299|SPATS2|65244|spermatogenesis associated, serine-rich 2	AK292334|SPATS2|65244|spermatogenesis associated, serine-rich 2	AK023202|SPATS2|65244|spermatogenesis associated, serine-rich 2	BX648916|SPATS2|65244|spermatogenesis associated, serine-rich 2	BC032441|SPATS2|65244|spermatogenesis associated, serine-rich 2
hg18_v1_chr11_+_57285809_57286021	0.28687	SOX2.p2	NM_001085458|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085459|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085460|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085461|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085462|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085463|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085464|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085465|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085466|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085467|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085468|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085469|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001331|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062317|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062318|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062319|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062320|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062321|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062322|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062323|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062324|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062325|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062326|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062327|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062328|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062329|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062330|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062331|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062332|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062333|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062334|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062335|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062336|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062337|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062338|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062339|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062340|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062341|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062342|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062343|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062344|CTNND1|1500|catenin (cadherin-associated protein), delta 1	BC075795|CTNND1|1500|catenin (cadherin-associated protein), delta 1
hg18_v1_chr11_-_16454493_16454510	0.286741	SOX2.p2	AF309034|SOX6|55553|SRY (sex determining region Y)-box 6	NM_033326|SOX6|55553|SRY (sex determining region Y)-box 6
hg18_v1_chr14_+_22059174_22059204	0.286616	SOX2.p2	
hg18_v1_chr20_-_42457717_42457759	0.286517	SOX2.p2	
hg18_v1_chr15_+_91244563_91244606	0.286174	SOX2.p2	BC007347|CHD2|1106|chromodomain helicase DNA binding protein 2	BC020810|CHD2|1106|chromodomain helicase DNA binding protein 2
hg18_v1_chr9_-_14303509_14303718	0.284823	SOX2.p2	BT007266|NFIB|4781|nuclear factor I/B	DQ891097|NFIB|4781|nuclear factor I/B	DQ894279|NFIB|4781|nuclear factor I/B	EU832141|NFIB|4781|nuclear factor I/B	EU832234|NFIB|4781|nuclear factor I/B	AK290603|NFIB|4781|nuclear factor I/B	BC001283|NFIB|4781|nuclear factor I/B	U85193|NFIB|4781|nuclear factor I/B
hg18_v1_chr6_+_100161370_100161370	0.28464	SOX2.p2	AY004253|PRDM13|59336|PR domain containing 13	NM_021620|PRDM13|59336|PR domain containing 13
hg18_v1_chr7_-_150352484_150352518	0.284576	SOX2.p2	BC128587|ATG9B|285973|ATG9 autophagy related 9 homolog B (S. cerevisiae)	AK096734|ATG9B|285973|ATG9 autophagy related 9 homolog B (S. cerevisiae)	AY515311|ATG9B|285973|ATG9 autophagy related 9 homolog B (S. cerevisiae)	NM_173681|ATG9B|285973|ATG9 autophagy related 9 homolog B (S. cerevisiae)
hg18_v1_chr1_+_151498802_151498802	0.283797	SOX2.p2	BC108290|LOR|4014|loricrin	NM_000427|LOR|4014|loricrin
hg18_v1_chr6_-_11340869_11340885	0.283335	SOX2.p2	U64317|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9	BC020686|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9	BC050740|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9	BC040207|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9
hg18_v1_chr1_+_144152864_144153034	0.283261	SOX2.p2	CR612183|TXNIP|10628|thioredoxin interacting protein	CR593638|TXNIP|10628|thioredoxin interacting protein	CR614030|TXNIP|10628|thioredoxin interacting protein
hg18_v1_chr12_-_10464308_10464460	0.282765	SOX2.p2	AF078550|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3	AF350016|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3	L14542|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3	NM_002261|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3	NM_007333|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3
hg18_v1_chr18_-_21186107_21186215	0.282711	SOX2.p2	AJ518106|ZNF521|25925|zinc finger protein 521	BC032869|ZNF521|25925|zinc finger protein 521	AK027354|ZNF521|25925|zinc finger protein 521	AK293067|ZNF521|25925|zinc finger protein 521	NM_015461|ZNF521|25925|zinc finger protein 521
hg18_v1_chr9_+_136358145_136358298	0.282629	SOX2.p2	BC110998|RXRA|6256|retinoid X receptor, alpha	X52773|RXRA|6256|retinoid X receptor, alpha	EU446653|RXRA|6256|retinoid X receptor, alpha	AB307705|RXRA|6256|retinoid X receptor, alpha
hg18_v1_chr13_+_45174446_45174446	0.282242	SOX2.p2	AK093129|SPERT|220082|spermatid associated	NM_152719|SPERT|220082|spermatid associated
hg18_v1_chr7_+_106897737_106897740	0.282193	SOX2.p2	NM_005295|GPR22|2845|G protein-coupled receptor 22	AK122621|GPR22|2845|G protein-coupled receptor 22	AK307393|GPR22|2845|G protein-coupled receptor 22
hg18_v1_chr12_-_69434598_69434637	0.282188	SOX2.p2	X82635|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	CR625935|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	NM_130846|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	U77917|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	BC072386|PTPRR|5801|protein tyrosine phosphatase, receptor type, R
hg18_v1_chr10_-_64698831_64699011	0.280375	SOX2.p2	BC126403|JMJD1C|221037|jumonji domain containing 1C	BC143722|JMJD1C|221037|jumonji domain containing 1C	BX537954|JMJD1C|221037|jumonji domain containing 1C	NM_004241|JMJD1C|221037|jumonji domain containing 1C	BC108649|JMJD1C|221037|jumonji domain containing 1C
hg18_v1_chr7_+_129634935_129634953	0.28014	SOX2.p2	BC017587|C7orf45|136263|chromosome 7 open reading frame 45	NM_145268|C7orf45|136263|chromosome 7 open reading frame 45	AK097635|C7orf45|136263|chromosome 7 open reading frame 45
hg18_v1_chr4_+_71986927_71987035	0.280133	SOX2.p2	AK093545|MOBKL1A|92597|MOB1, Mps One Binder kinase activator-like 1A (yeast)	NM_173468|MOBKL1A|92597|MOB1, Mps One Binder kinase activator-like 1A (yeast)	AK299481|MOBKL1A|92597|MOB1, Mps One Binder kinase activator-like 1A (yeast)	BC038112|MOBKL1A|92597|MOB1, Mps One Binder kinase activator-like 1A (yeast)	AK313513|MOBKL1A|92597|MOB1, Mps One Binder kinase activator-like 1A (yeast)
hg18_v1_chr17_-_59817654_59817680	0.279897	SOX2.p2	M37780|PECAM1|5175|platelet/endothelial cell adhesion molecule	M28526|PECAM1|5175|platelet/endothelial cell adhesion molecule
hg18_v1_chr4_+_24923490_24923601	0.279121	SOX2.p2	NM_024936|ZCCHC4|29063|zinc finger, CCHC domain containing 4	BC157834|ZCCHC4|29063|zinc finger, CCHC domain containing 4	BC171821|ZCCHC4|29063|zinc finger, CCHC domain containing 4	AK299211|ZCCHC4|29063|zinc finger, CCHC domain containing 4	AK309675|ZCCHC4|29063|zinc finger, CCHC domain containing 4	AY629351|ZCCHC4|29063|zinc finger, CCHC domain containing 4	BC016914|ZCCHC4|29063|zinc finger, CCHC domain containing 4	AF161537|ZCCHC4|29063|zinc finger, CCHC domain containing 4
hg18_v1_chr22_-_34566367_34566575	0.276994	SOX2.p2	AF229058|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	AL009266|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	AK314632|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	CR600481|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	BC013115|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	BC025281|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	AK291460|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_001031695|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_001082576|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_001082577|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_014309|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2
hg18_v1_chr6_-_10523203_10523320	0.276315	SOX2.p2	FJ794945|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)	M61156|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)	M36711|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)	X52611|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)
hg18_v1_chr10_+_82287637_82287637	0.275897	SOX2.p2	AK123885|SH2D4B|387694|SH2 domain containing 4B	NM_207372|SH2D4B|387694|SH2 domain containing 4B
hg18_v1_chr1_-_21373816_21373837	0.274958	SOX2.p2	BC030578|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3	NM_001198803|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3
hg18_v1_chr11_-_5247948_5247948	0.274025	SOX2.p2	NM_005330|HBE1|3046|hemoglobin, epsilon 1
hg18_v1_chr17_-_60088459_60088600	0.273716	SOX2.p2	AF310676|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2	AF301463|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2	BC051283|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2	BC093876|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2	BC111945|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2
hg18_v1_chr8_+_103633023_103633052	0.273495	SOX2.p2	NM_024410|ODF1|4956|outer dense fiber of sperm tails 1	AK315276|ODF1|4956|outer dense fiber of sperm tails 1	BC104456|ODF1|4956|outer dense fiber of sperm tails 1	BC104457|ODF1|4956|outer dense fiber of sperm tails 1
hg18_v1_chr9_+_71009746_71009897	0.273403	SOX2.p2	NM_001170415|TJP2|9414|tight junction protein 2 (zona occludens 2)	AK302483|TJP2|9414|tight junction protein 2 (zona occludens 2)	AK295034|TJP2|9414|tight junction protein 2 (zona occludens 2)	NM_001170416|TJP2|9414|tight junction protein 2 (zona occludens 2)
hg18_v1_chr7_-_150555153_150555263	0.272922	SOX2.p2	BC001661|ABCF2|10061|ATP-binding cassette, sub-family F (GCN20), member 2	AF261092|ABCF2|10061|ATP-binding cassette, sub-family F (GCN20), member 2	AF261091|ABCF2|10061|ATP-binding cassette, sub-family F (GCN20), member 2	NM_005692|ABCF2|10061|ATP-binding cassette, sub-family F (GCN20), member 2	NM_007189|ABCF2|10061|ATP-binding cassette, sub-family F (GCN20), member 2
hg18_v1_chr6_-_49820030_49820126	0.271639	SOX2.p2	AK223380|CRISP3|10321|cysteine-rich secretory protein 3	X94323|CRISP3|10321|cysteine-rich secretory protein 3	AK303966|CRISP3|10321|cysteine-rich secretory protein 3	AK313387|CRISP3|10321|cysteine-rich secretory protein 3	AK292786|CRISP3|10321|cysteine-rich secretory protein 3	NM_001190986|CRISP3|10321|cysteine-rich secretory protein 3	NM_006061|CRISP3|10321|cysteine-rich secretory protein 3
hg18_v1_chr12_+_62524778_62524849	0.271209	SOX2.p2	BC053903|SRGAP1|57522|SLIT-ROBO Rho GTPase activating protein 1	NM_020762|SRGAP1|57522|SLIT-ROBO Rho GTPase activating protein 1	BC029919|SRGAP1|57522|SLIT-ROBO Rho GTPase activating protein 1
hg18_v1_chr1_-_154318412_154318433	0.271129	SOX2.p2	AY950677|MEX3A|92312|mex-3 homolog A (C. elegans)	NM_001093725|MEX3A|92312|mex-3 homolog A (C. elegans)
hg18_v1_chr22_-_48865797_48865842	0.270886	SOX2.p2	AK294048|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1
hg18_v1_chr3_+_157877146_157877146	0.270744	SOX2.p2	BC034397|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase	NM_001184718|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase
hg18_v1_chr6_-_133076873_133076889	0.270391	SOX2.p2	U39664|VNN1|8876|vanin 1	BC096268|VNN1|8876|vanin 1	AJ132099|VNN1|8876|vanin 1	BC096265|VNN1|8876|vanin 1	BC096266|VNN1|8876|vanin 1	BC096267|VNN1|8876|vanin 1	AK290425|VNN1|8876|vanin 1	AK314265|VNN1|8876|vanin 1	NM_004666|VNN1|8876|vanin 1
hg18_v1_chr9_+_95886558_95886614	0.270267	SOX2.p2	BC031279|PTPDC1|138639|protein tyrosine phosphatase domain containing 1	NM_152422|PTPDC1|138639|protein tyrosine phosphatase domain containing 1	AK310403|PTPDC1|138639|protein tyrosine phosphatase domain containing 1	AK289692|PTPDC1|138639|protein tyrosine phosphatase domain containing 1
hg18_v1_chr1_-_152445432_152445522	0.269788	SOX2.p2	NM_001010979|C1orf189|388701|chromosome 1 open reading frame 189	BC127710|C1orf189|388701|chromosome 1 open reading frame 189	BC130509|C1orf189|388701|chromosome 1 open reading frame 189
hg18_v1_chr6_-_159386007_159386171	0.269709	SOX2.p2	BC111731|TAGAP|117289|T-cell activation RhoGTPase activating protein	AK097090|TAGAP|117289|T-cell activation RhoGTPase activating protein	BC015859|TAGAP|117289|T-cell activation RhoGTPase activating protein	AL832662|TAGAP|117289|T-cell activation RhoGTPase activating protein	AF385429|TAGAP|117289|T-cell activation RhoGTPase activating protein	AF385430|TAGAP|117289|T-cell activation RhoGTPase activating protein	NM_054114|TAGAP|117289|T-cell activation RhoGTPase activating protein	NM_138810|TAGAP|117289|T-cell activation RhoGTPase activating protein	NM_152133|TAGAP|117289|T-cell activation RhoGTPase activating protein
hg18_v1_chr22_-_15453440_15453699	0.268984	SOX2.p2	BC139842|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2	BC139926|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2	DQ892082|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2	DQ895275|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2	GQ129410|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2	GQ129411|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2	CR456508|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2	BC100811|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2	BC100812|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2	BC100813|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2	BC022006|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2	BC033797|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2	NM_014406|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2
hg18_v1_chr2_+_232281491_232281663	0.26894	SOX2.p2	CR592067|PTMA|5757|prothymosin, alpha	CR595284|PTMA|5757|prothymosin, alpha	CR612313|PTMA|5757|prothymosin, alpha	CR617850|PTMA|5757|prothymosin, alpha	BC098420|PTMA|5757|prothymosin, alpha	BC070480|PTMA|5757|prothymosin, alpha	CR592101|PTMA|5757|prothymosin, alpha	CR597059|PTMA|5757|prothymosin, alpha	CR599711|PTMA|5757|prothymosin, alpha	CR611351|PTMA|5757|prothymosin, alpha	CR612721|PTMA|5757|prothymosin, alpha	CR616215|PTMA|5757|prothymosin, alpha	CR623981|PTMA|5757|prothymosin, alpha	BC003510|PTMA|5757|prothymosin, alpha	BC051265|PTMA|5757|prothymosin, alpha	CR605128|PTMA|5757|prothymosin, alpha	CR626005|PTMA|5757|prothymosin, alpha	BC071879|PTMA|5757|prothymosin, alpha	BC071647|PTMA|5757|prothymosin, alpha	CR602673|PTMA|5757|prothymosin, alpha	CR599993|PTMA|5757|prothymosin, alpha	CR621770|PTMA|5757|prothymosin, alpha	M26708|PTMA|5757|prothymosin, alpha	CR623382|PTMA|5757|prothymosin, alpha	CR623715|PTMA|5757|prothymosin, alpha	CR621405|PTMA|5757|prothymosin, alpha	M14483|PTMA|5757|prothymosin, alpha	CR593816|PTMA|5757|prothymosin, alpha	CR592291|PTMA|5757|prothymosin, alpha	BC066905|PTMA|5757|prothymosin, alpha	CR601616|PTMA|5757|prothymosin, alpha	M14794|PTMA|5757|prothymosin, alpha	DQ892963|PTMA|5757|prothymosin, alpha	DQ896210|PTMA|5757|prothymosin, alpha	AF348514|PTMA|5757|prothymosin, alpha	AY169282|PTMA|5757|prothymosin, alpha	CR619087|PTMA|5757|prothymosin, alpha	CR599378|PTMA|5757|prothymosin, alpha	CR600163|PTMA|5757|prothymosin, alpha
hg18_v1_chr6_+_57062760_57062787	0.266731	SOX2.p2	AY055204|ZNF451|26036|zinc finger protein 451	NM_001031623|ZNF451|26036|zinc finger protein 451	NM_015555|ZNF451|26036|zinc finger protein 451
hg18_v1_chr3_+_44665220_44665280	0.265668	SOX2.p2	NM_003420|ZNF35|7584|zinc finger protein 35	AK300581|ZNF35|7584|zinc finger protein 35	AK314821|ZNF35|7584|zinc finger protein 35	BC013597|ZNF35|7584|zinc finger protein 35	BC015892|ZNF35|7584|zinc finger protein 35	X07289|ZNF35|7584|zinc finger protein 35
hg18_v1_chr4_-_95482994_95483049	0.265441	SOX2.p2	CR622166|HPGDS|27306|hematopoietic prostaglandin D synthase	CR619711|HPGDS|27306|hematopoietic prostaglandin D synthase	BC020734|HPGDS|27306|hematopoietic prostaglandin D synthase	AK290075|HPGDS|27306|hematopoietic prostaglandin D synthase	NM_014485|HPGDS|27306|hematopoietic prostaglandin D synthase
hg18_v1_chr3_+_20056527_20056527	0.264881	SOX2.p2	NM_003884|KAT2B|8850|K(lysine) acetyltransferase 2B	U57317|KAT2B|8850|K(lysine) acetyltransferase 2B
hg18_v1_chr15_+_50098724_50098728	0.26402	SOX2.p2	CR749401|MAPK6|5597|mitogen-activated protein kinase 6
hg18_v1_chr1_-_202730135_202730642	0.26381	SOX2.p2	BC094741|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide
hg18_v1_chr6_-_11340887_11340906	0.262959	SOX2.p2	NM_006403|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9	NM_182966|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9
hg18_v1_chr1_+_165075304_165075329	0.262402	SOX2.p2	AK293946|POGK|57645|pogo transposable element with KRAB domain	AK299537|POGK|57645|pogo transposable element with KRAB domain
hg18_v1_chr13_-_74799898_74799949	0.262135	SOX2.p2	CR749622|TBC1D4|9882|TBC1 domain family, member 4
hg18_v1_chr1_-_1701313_1701367	0.261702	SOX2.p2	AF250320|NADK|65220|NAD kinase	NM_001198994|NADK|65220|NAD kinase
hg18_v1_chr11_-_101828563_101829084	0.261137	SOX2.p2	DQ891654|TMEM123|114908|transmembrane protein 123	DQ894842|TMEM123|114908|transmembrane protein 123	AY358696|TMEM123|114908|transmembrane protein 123	BC032296|TMEM123|114908|transmembrane protein 123	AY157580|TMEM123|114908|transmembrane protein 123	AK075420|TMEM123|114908|transmembrane protein 123	AY008283|TMEM123|114908|transmembrane protein 123	AK225790|TMEM123|114908|transmembrane protein 123	NM_052932|TMEM123|114908|transmembrane protein 123
hg18_v1_chr1_+_196874839_196874857	0.260475	SOX2.p2	AK307635|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	AK130573|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	AK292131|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	AK299986|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	AK303539|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	BC017863|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	Y00638|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	BC014239|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	BC031525|PTPRC|5788|protein tyrosine phosphatase, receptor type, C
hg18_v1_chr12_-_69434330_69434503	0.26036	SOX2.p2	BC119777|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	BC122866|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	BC110900|PTPRR|5801|protein tyrosine phosphatase, receptor type, R
hg18_v1_chr7_-_139523187_139523475	0.260296	SOX2.p2	AK131497|JHDM1D|80853|jumonji C domain containing histone demethylase 1 homolog D (S. cerevisiae)	NM_030647|JHDM1D|80853|jumonji C domain containing histone demethylase 1 homolog D (S. cerevisiae)
hg18_v1_chr3_-_158703821_158703829	0.260161	SOX2.p2	BC111017|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)	AB051479|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)	NM_001167911|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)	NM_001167912|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)
hg18_v1_chr5_-_176833197_176833256	0.260094	SOX2.p2	U00802|DBN1|1627|drebrin 1	D17530|DBN1|1627|drebrin 1	BC000283|DBN1|1627|drebrin 1	BC007281|DBN1|1627|drebrin 1	BC007567|DBN1|1627|drebrin 1	AK094125|DBN1|1627|drebrin 1	AK225523|DBN1|1627|drebrin 1	AK314645|DBN1|1627|drebrin 1
hg18_v1_chr22_+_20316968_20317085	0.260056	SOX2.p2	AK302030|CCDC116|164592|coiled-coil domain containing 116	AK093365|CCDC116|164592|coiled-coil domain containing 116	BC033499|CCDC116|164592|coiled-coil domain containing 116	NM_152612|CCDC116|164592|coiled-coil domain containing 116
hg18_v1_chr19_+_54530546_54530609	0.259549	SOX2.p2	X14046|CD37|951|CD37 molecule	CR612129|CD37|951|CD37 molecule	BC106752|CD37|951|CD37 molecule	BT019851|CD37|951|CD37 molecule	CR541877|CD37|951|CD37 molecule
hg18_v1_chr17_-_59817456_59817545	0.259341	SOX2.p2	AK304166|PECAM1|5175|platelet/endothelial cell adhesion molecule	DQ893644|PECAM1|5175|platelet/endothelial cell adhesion molecule	AK290692|PECAM1|5175|platelet/endothelial cell adhesion molecule
hg18_v1_chr4_+_155707089_155707104	0.259032	SOX2.p2	CR598319|FGB|2244|fibrinogen beta chain	CR615740|FGB|2244|fibrinogen beta chain	CR596720|FGB|2244|fibrinogen beta chain
hg18_v1_chr15_-_74091817_74091839	0.258805	SOX2.p2	CR749519|NRG4|145957|neuregulin 4	AK311507|NRG4|145957|neuregulin 4	BC017568|NRG4|145957|neuregulin 4	NM_138573|NRG4|145957|neuregulin 4
hg18_v1_chr11_+_4564596_4564596	0.258536	SOX2.p2	BC136921|OR52I2|143502|olfactory receptor, family 52, subfamily I, member 2	BC151144|OR52I2|143502|olfactory receptor, family 52, subfamily I, member 2	NM_001005170|OR52I2|143502|olfactory receptor, family 52, subfamily I, member 2
hg18_v1_chr4_+_3288042_3288159	0.25804	SOX2.p2	BC106944|RGS12|6002|regulator of G-protein signaling 12
hg18_v1_chr12_-_10479810_10479882	0.256117	SOX2.p2	BC106069|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2	AK295525|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2	AF260134|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2	AF350017|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3	NM_002260|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2	X54869|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2	Y13055|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2	AF461157|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3	BC093644|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2	BC112039|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2
hg18_v1_chr4_-_76817582_76817586	0.255964	SOX2.p2	AF053535|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2	AF145284|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2
hg18_v1_chr1_-_205210567_205210592	0.255409	SOX2.p2	AK298394|FCAMR|83953|Fc receptor, IgA, IgM, high affinity	NM_001122979|FCAMR|83953|Fc receptor, IgA, IgM, high affinity	NM_001170631|FCAMR|83953|Fc receptor, IgA, IgM, high affinity	NM_032029|FCAMR|83953|Fc receptor, IgA, IgM, high affinity
hg18_v1_chr1_-_47468029_47468029	0.254462	SOX2.p2	M61108|TAL1|6886|T-cell acute lymphocytic leukemia 1	NM_003189|TAL1|6886|T-cell acute lymphocytic leukemia 1
hg18_v1_chr5_-_176833259_176833299	0.254443	SOX2.p2	NM_004395|DBN1|1627|drebrin 1
hg18_v1_chr12_-_112057650_112057941	0.254258	SOX2.p2	DQ892315|RASAL1|8437|RAS protein activator like 1 (GAP1 like)	EU176685|RASAL1|8437|RAS protein activator like 1 (GAP1 like)	EU832646|RASAL1|8437|RAS protein activator like 1 (GAP1 like)	EU832723|RASAL1|8437|RAS protein activator like 1 (GAP1 like)	BC093724|RASAL1|8437|RAS protein activator like 1 (GAP1 like)	BC143258|RASAL1|8437|RAS protein activator like 1 (GAP1 like)	BC143261|RASAL1|8437|RAS protein activator like 1 (GAP1 like)	BC143262|RASAL1|8437|RAS protein activator like 1 (GAP1 like)	BC014420|RASAL1|8437|RAS protein activator like 1 (GAP1 like)	AK309562|RASAL1|8437|RAS protein activator like 1 (GAP1 like)	NM_001193521|RASAL1|8437|RAS protein activator like 1 (GAP1 like)
hg18_v1_chr11_+_61943082_61943143	0.254166	SOX2.p2	AK312165|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)	NM_003357|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)	BC004481|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)	U01101|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)	DQ893375|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)	DQ896769|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)	X13197|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)	CR541780|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)
hg18_v1_chr1_+_179269183_179269183	0.253671	SOX2.p2	NM_001194999|MR1|3140|major histocompatibility complex, class I-related	NM_001195000|MR1|3140|major histocompatibility complex, class I-related	NM_001195035|MR1|3140|major histocompatibility complex, class I-related	NM_001531|MR1|3140|major histocompatibility complex, class I-related
hg18_v1_chr12_-_94135154_94135581	0.253644	SOX2.p2	BC125225|FGD6|55785|FYVE, RhoGEF and PH domain containing 6	BC125226|FGD6|55785|FYVE, RhoGEF and PH domain containing 6	BX538322|FGD6|55785|FYVE, RhoGEF and PH domain containing 6	AK124904|FGD6|55785|FYVE, RhoGEF and PH domain containing 6	NM_018351|FGD6|55785|FYVE, RhoGEF and PH domain containing 6
hg18_v1_chr16_+_68238460_68238571	0.253549	SOX2.p2	AF134870|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive
hg18_v1_chr10_+_126620681_126620681	0.253362	SOX2.p2	NM_017580|ZRANB1|54764|zinc finger, RAN-binding domain containing 1
hg18_v1_chr19_+_1200882_1200886	0.253296	SOX2.p2	BC060848|MIDN|90007|midnolin	BC094778|MIDN|90007|midnolin
hg18_v1_chr7_+_153633127_153633510	0.253053	SOX2.p2	AK309760|DPP6|1804|dipeptidyl-peptidase 6	AK308993|DPP6|1804|dipeptidyl-peptidase 6	AK293582|DPP6|1804|dipeptidyl-peptidase 6	NM_001936|DPP6|1804|dipeptidyl-peptidase 6	M96860|DPP6|1804|dipeptidyl-peptidase 6	AK294483|DPP6|1804|dipeptidyl-peptidase 6
hg18_v1_chr14_+_59782222_59782227	0.252614	SOX2.p2	AK097843|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A	NM_177952|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A	AK313337|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A
hg18_v1_chr4_-_76817587_76817620	0.252506	SOX2.p2	BC011731|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2	AK291772|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2
hg18_v1_chr1_-_155834357_155834493	0.251677	SOX2.p2	AF329490|FCRL4|83417|Fc receptor-like 4	AF397452|FCRL4|83417|Fc receptor-like 4	BC143628|FCRL4|83417|Fc receptor-like 4	BC125173|FCRL4|83417|Fc receptor-like 4	BC125174|FCRL4|83417|Fc receptor-like 4	AF343659|FCRL4|83417|Fc receptor-like 4	AF343660|FCRL4|83417|Fc receptor-like 4	AF343661|FCRL4|83417|Fc receptor-like 4	NM_031282|FCRL4|83417|Fc receptor-like 4
hg18_v1_chr10_+_35934343_35934343	0.249939	SOX2.p2	AK074504|GJD4|219770|gap junction protein, delta 4, 40.1kDa	NM_153368|GJD4|219770|gap junction protein, delta 4, 40.1kDa
hg18_v1_chr4_+_83570980_83571006	0.249685	SOX2.p2	CR457141|ENOPH1|58478|enolase-phosphatase 1
hg18_v1_chr17_-_59817575_59817633	0.248952	SOX2.p2	AF281287|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF281288|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF281289|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF281290|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF281291|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF281292|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF281293|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF281294|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF281295|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF281296|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF281297|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF281298|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF281299|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF281300|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF281301|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF393676|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF393677|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF393678|PECAM1|5175|platelet/endothelial cell adhesion molecule
hg18_v1_chr9_+_94766379_94766403	0.248745	SOX2.p2	CR591538|FGD3|89846|FYVE, RhoGEF and PH domain containing 3
hg18_v1_chr1_+_150005754_150005815	0.248701	SOX2.p2	AF175296|OAZ3|51686|ornithine decarboxylase antizyme 3	NM_016178|OAZ3|51686|ornithine decarboxylase antizyme 3	BC128558|OAZ3|51686|ornithine decarboxylase antizyme 3	BC128559|OAZ3|51686|ornithine decarboxylase antizyme 3	AY713300|OAZ3|51686|ornithine decarboxylase antizyme 3
hg18_v1_chr17_+_28279283_28279349	0.248386	SOX2.p2	AL117619|TMEM98|26022|transmembrane protein 98	CR593283|TMEM98|26022|transmembrane protein 98	CR597085|TMEM98|26022|transmembrane protein 98	AK313569|TMEM98|26022|transmembrane protein 98	CR596889|TMEM98|26022|transmembrane protein 98	CR613257|TMEM98|26022|transmembrane protein 98	AY358573|TMEM98|26022|transmembrane protein 98	CR617431|TMEM98|26022|transmembrane protein 98	CR606539|TMEM98|26022|transmembrane protein 98	BC000526|TMEM98|26022|transmembrane protein 98
hg18_v1_chr22_+_25383392_25383552	0.247986	SOX2.p2	AB263414|MIAT|440823|myocardial infarction associated transcript (non-protein coding)	AB263415|MIAT|440823|myocardial infarction associated transcript (non-protein coding)	AB263416|MIAT|440823|myocardial infarction associated transcript (non-protein coding)	AB263417|MIAT|440823|myocardial infarction associated transcript (non-protein coding)	AK098833|MIAT|440823|myocardial infarction associated transcript (non-protein coding)
hg18_v1_chrX_-_110541029_110541029	0.247618	SOX2.p2	AJ003112|DCX|1641|doublecortin	NM_000555|DCX|1641|doublecortin
hg18_v1_chr15_+_81906983_81907145	0.246892	SOX2.p2	AK309086|SH3GL3|6457|SH3-domain GRB2-like 3	NM_003027|SH3GL3|6457|SH3-domain GRB2-like 3	AK307442|SH3GL3|6457|SH3-domain GRB2-like 3	BC042864|SH3GL3|6457|SH3-domain GRB2-like 3
hg18_v1_chrX_+_119379967_119380024	0.246817	SOX2.p2	AK309999|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide	NM_001142447|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide	NM_012069|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide	AF158383|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide	AF158384|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide	BC117227|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide	BC143404|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide	BC143406|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide	BC143407|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide
hg18_v1_chr15_-_32398220_32398320	0.246762	SOX2.p2	BC126241|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6	BC126243|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6	AF108831|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6	AK315283|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6	NM_005135|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6
hg18_v1_chr7_-_5533621_5533848	0.246609	SOX2.p2	CR604039|ACTB|60|actin, beta	CR614609|ACTB|60|actin, beta	CR593025|ACTB|60|actin, beta	CR617617|ACTB|60|actin, beta	BC009636|ACTB|60|actin, beta
hg18_v1_chr4_-_109307325_109307401	0.246548	SOX2.p2	AK303272|LEF1|51176|lymphoid enhancer-binding factor 1	NM_001166119|LEF1|51176|lymphoid enhancer-binding factor 1
hg18_v1_chr12_-_120725210_120725271	0.246481	SOX2.p2	CR611200|LOC338799|338799|hypothetical LOC338799
hg18_v1_chr7_-_128203079_128203079	0.24614	SOX2.p2	DQ822478|OPN1SW|611|opsin 1 (cone pigments), short-wave-sensitive	NM_001708|OPN1SW|611|opsin 1 (cone pigments), short-wave-sensitive
hg18_v1_chr15_-_72281904_72281919	0.246125	SOX2.p2	AK298921|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)	BX537413|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)
hg18_v1_chr16_+_54158084_54158168	0.245039	SOX2.p2	BC006000|CAPNS2|84290|calpain, small subunit 2	NM_032330|CAPNS2|84290|calpain, small subunit 2	BC005397|CAPNS2|84290|calpain, small subunit 2	AY052551|CAPNS2|84290|calpain, small subunit 2	EU832656|CAPNS2|84290|calpain, small subunit 2
hg18_v1_chr5_+_132237253_132237258	0.244856	SOX2.p2	AJ306405|LEAP2|116842|liver expressed antimicrobial peptide 2	AY052782|LEAP2|116842|liver expressed antimicrobial peptide 2	NM_052971|LEAP2|116842|liver expressed antimicrobial peptide 2	BC070199|LEAP2|116842|liver expressed antimicrobial peptide 2
hg18_v1_chr12_-_91063441_91063803	0.244331	SOX2.p2	BT019839|BTG1|694|B-cell translocation gene 1, anti-proliferative	BT019840|BTG1|694|B-cell translocation gene 1, anti-proliferative	BT019841|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR456876|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR541782|BTG1|694|B-cell translocation gene 1, anti-proliferative	EU176394|BTG1|694|B-cell translocation gene 1, anti-proliferative	EU176740|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR590022|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR620161|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR595512|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR601264|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR609466|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR616928|BTG1|694|B-cell translocation gene 1, anti-proliferative	BC016759|BTG1|694|B-cell translocation gene 1, anti-proliferative	BC064953|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR617798|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR604248|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR604369|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR606339|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR609805|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR614716|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR615938|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR616550|BTG1|694|B-cell translocation gene 1, anti-proliferative	X61123|BTG1|694|B-cell translocation gene 1, anti-proliferative	AK313309|BTG1|694|B-cell translocation gene 1, anti-proliferative	AK307057|BTG1|694|B-cell translocation gene 1, anti-proliferative	NM_001731|BTG1|694|B-cell translocation gene 1, anti-proliferative
hg18_v1_chr1_+_67404756_67404756	0.243611	SOX2.p2	AF461422|IL23R|149233|interleukin 23 receptor	NM_144701|IL23R|149233|interleukin 23 receptor
hg18_v1_chr1_+_165075345_165075394	0.24262	SOX2.p2	AB040946|POGK|57645|pogo transposable element with KRAB domain	NM_017542|POGK|57645|pogo transposable element with KRAB domain	AK056711|POGK|57645|pogo transposable element with KRAB domain	BC131624|POGK|57645|pogo transposable element with KRAB domain
hg18_v1_chr1_-_171905593_171905625	0.242352	SOX2.p2	AK127170|ANKRD45|339416|ankyrin repeat domain 45	BC126353|ANKRD45|339416|ankyrin repeat domain 45	BC126355|ANKRD45|339416|ankyrin repeat domain 45	NM_198493|ANKRD45|339416|ankyrin repeat domain 45
hg18_v1_chr9_+_96807107_96807126	0.241857	SOX2.p2	CR626738|C9orf3|84909|chromosome 9 open reading frame 3
hg18_v1_chr5_+_34723420_34723420	0.24165	SOX2.p2	AY354204|RAI14|26064|retinoic acid induced 14	NM_001145523|RAI14|26064|retinoic acid induced 14
hg18_v1_chr15_-_47125788_47126069	0.241317	SOX2.p2	D87445|SECISBP2L|9728|SECIS binding protein 2-like	AK307480|SECISBP2L|9728|SECIS binding protein 2-like	AK308183|SECISBP2L|9728|SECIS binding protein 2-like	BC008635|SECISBP2L|9728|SECIS binding protein 2-like	BC033001|SECISBP2L|9728|SECIS binding protein 2-like	NM_001193489|SECISBP2L|9728|SECIS binding protein 2-like	NM_014701|SECISBP2L|9728|SECIS binding protein 2-like
hg18_v1_chr4_+_39874921_39875152	0.240903	SOX2.p2	NM_004310|RHOH|399|ras homolog gene family, member H	CR619539|RHOH|399|ras homolog gene family, member H	Z35227|RHOH|399|ras homolog gene family, member H	CR607001|RHOH|399|ras homolog gene family, member H	BC014261|RHOH|399|ras homolog gene family, member H	AK313744|RHOH|399|ras homolog gene family, member H
hg18_v1_chr6_+_122762449_122762581	0.240899	SOX2.p2	AK225593|HSF2|3298|heat shock transcription factor 2	AK225594|HSF2|3298|heat shock transcription factor 2	BC112323|HSF2|3298|heat shock transcription factor 2	M65217|HSF2|3298|heat shock transcription factor 2	AK294624|HSF2|3298|heat shock transcription factor 2	BC005329|HSF2|3298|heat shock transcription factor 2	CR604546|HSF2|3298|heat shock transcription factor 2	BC064622|HSF2|3298|heat shock transcription factor 2	BC121050|HSF2|3298|heat shock transcription factor 2	BC121051|HSF2|3298|heat shock transcription factor 2	BC128420|HSF2|3298|heat shock transcription factor 2	AK316377|HSF2|3298|heat shock transcription factor 2	EU446897|HSF2|3298|heat shock transcription factor 2
hg18_v1_chr22_-_34566276_34566297	0.239811	SOX2.p2	CR456559|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2
hg18_v1_chr15_+_21361546_21361546	0.239681	SOX2.p2	NM_005664|MKRN3|7681|makorin ring finger protein 3
hg18_v1_chr15_+_49831030_49831200	0.239474	SOX2.p2	NM_001142885|TMOD2|29767|tropomodulin 2 (neuronal)	NM_014548|TMOD2|29767|tropomodulin 2 (neuronal)	BC036184|TMOD2|29767|tropomodulin 2 (neuronal)	BC064961|TMOD2|29767|tropomodulin 2 (neuronal)	AF177169|TMOD2|29767|tropomodulin 2 (neuronal)	AK293823|TMOD2|29767|tropomodulin 2 (neuronal)	AK292733|TMOD2|29767|tropomodulin 2 (neuronal)
hg18_v1_chr6_+_122762384_122762405	0.239277	SOX2.p2	NM_001135564|HSF2|3298|heat shock transcription factor 2	NM_004506|HSF2|3298|heat shock transcription factor 2
hg18_v1_chr15_-_72281833_72281878	0.239213	SOX2.p2	AF352728|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)	AY359089|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)
hg18_v1_chr6_+_134800533_134800550	0.238929	SOX2.p2	AK055166|LOC154092|154092|hypothetical LOC154092
hg18_v1_chr14_+_65205750_65205885	0.238053	SOX2.p2	AF052088|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	BC093889|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	BC101816|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	AJ514324|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	AJ514325|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	NM_178157|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)
hg18_v1_chr6_+_53043729_53043729	0.237232	SOX2.p2	AF176704|FBXO9|26268|F-box protein 9	NM_012347|FBXO9|26268|F-box protein 9
hg18_v1_chr7_+_150321771_150321824	0.237177	SOX2.p2	AK292928|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	AK302686|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	M93718|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	AK315213|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	AK223636|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	AK225827|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	M95296|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	BC069465|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	AF400594|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	DQ256129|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	DQ256130|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	DQ256131|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	NM_001160109|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	NM_001160110|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	NM_001160111|NOS3|4846|nitric oxide synthase 3 (endothelial cell)
hg18_v1_chr12_-_116983276_116983360	0.237016	SOX2.p2	AK310892|WSB2|55884|WD repeat and SOCS box containing 2	BC015887|WSB2|55884|WD repeat and SOCS box containing 2	AK298513|WSB2|55884|WD repeat and SOCS box containing 2	AF229181|WSB2|55884|WD repeat and SOCS box containing 2	NM_018639|WSB2|55884|WD repeat and SOCS box containing 2
hg18_v1_chr11_+_93940121_93940331	0.236986	SOX2.p2	NM_152431|PIWIL4|143689|piwi-like 4 (Drosophila)	AB079366|PIWIL4|143689|piwi-like 4 (Drosophila)	AK093475|PIWIL4|143689|piwi-like 4 (Drosophila)	BC031060|PIWIL4|143689|piwi-like 4 (Drosophila)	DQ891240|PIWIL4|143689|piwi-like 4 (Drosophila)	DQ894425|PIWIL4|143689|piwi-like 4 (Drosophila)
hg18_v1_chr19_+_45564549_45564697	0.236926	SOX2.p2	BC000553|PLD3|23646|phospholipase D family, member 3
hg18_v1_chr19_-_6453224_6453411	0.236924	SOX2.p2	EU831818|TUBB4|10382|tubulin, beta 4	EU831895|TUBB4|10382|tubulin, beta 4	BC006570|TUBB4|10382|tubulin, beta 4	AK095202|TUBB4|10382|tubulin, beta 4	AK295917|TUBB4|10382|tubulin, beta 4	AK075307|TUBB4|10382|tubulin, beta 4	BC013683|TUBB4|10382|tubulin, beta 4	NM_006087|TUBB4|10382|tubulin, beta 4	AK293503|TUBB4|10382|tubulin, beta 4
hg18_v1_chr20_+_2892918_2892935	0.236152	SOX2.p2	DQ891155|PTPRA|5786|protein tyrosine phosphatase, receptor type, A	DQ894334|PTPRA|5786|protein tyrosine phosphatase, receptor type, A
hg18_v1_chr4_-_145281237_145281353	0.235908	SOX2.p2	AY950614|GYPA|2993|glycophorin A (MNS blood group)	DQ893046|GYPA|2993|glycophorin A (MNS blood group)	L07251|GYPA|2993|glycophorin A (MNS blood group)	L07253|GYPA|2993|glycophorin A (MNS blood group)	U00177|GYPA|2993|glycophorin A (MNS blood group)	U00178|GYPA|2993|glycophorin A (MNS blood group)	U00179|GYPA|2993|glycophorin A (MNS blood group)	X57023|GYPA|2993|glycophorin A (MNS blood group)	M12857|GYPA|2993|glycophorin A (MNS blood group)	M36281|GYPA|2993|glycophorin A (MNS blood group)	X51798|GYPA|2993|glycophorin A (MNS blood group)	BC013328|GYPA|2993|glycophorin A (MNS blood group)	EU338231|GYPA|2993|glycophorin A (MNS blood group)	EU338232|GYPA|2993|glycophorin A (MNS blood group)	EU338233|GYPA|2993|glycophorin A (MNS blood group)	EU338234|GYPA|2993|glycophorin A (MNS blood group)	CR619929|GYPA|2993|glycophorin A (MNS blood group)	L31860|GYPA|2993|glycophorin A (MNS blood group)	X08054|GYPA|2993|glycophorin A (MNS blood group)	BC005319|GYPA|2993|glycophorin A (MNS blood group)	AK290561|GYPA|2993|glycophorin A (MNS blood group)	NM_002099|GYPA|2993|glycophorin A (MNS blood group)
hg18_v1_chr8_-_42742729_42742931	0.235778	SOX2.p2	Y16282|CHRNA6|8973|cholinergic receptor, nicotinic, alpha 6	BC014456|CHRNA6|8973|cholinergic receptor, nicotinic, alpha 6	NM_004198|CHRNA6|8973|cholinergic receptor, nicotinic, alpha 6	U62435|CHRNA6|8973|cholinergic receptor, nicotinic, alpha 6	AK298798|CHRNA6|8973|cholinergic receptor, nicotinic, alpha 6	AK313521|CHRNA6|8973|cholinergic receptor, nicotinic, alpha 6
hg18_v1_chr19_-_44920451_44920507	0.235293	SOX2.p2	FJ613334|CLC|1178|Charcot-Leyden crystal protein	BC119711|CLC|1178|Charcot-Leyden crystal protein	BC119712|CLC|1178|Charcot-Leyden crystal protein	FJ613335|CLC|1178|Charcot-Leyden crystal protein	L01664|CLC|1178|Charcot-Leyden crystal protein	NM_001828|CLC|1178|Charcot-Leyden crystal protein
hg18_v1_chr9_+_90193807_90193830	0.23514	SOX2.p2	AK315854|SPIN1|10927|spindlin 1
hg18_v1_chrX_+_65300803_65300931	0.234905	SOX2.p2	NM_001130860|HEPH|9843|hephaestin	AK311043|HEPH|9843|hephaestin	AB014598|HEPH|9843|hephaestin	NM_014799|HEPH|9843|hephaestin	AY358990|HEPH|9843|hephaestin	AK307761|HEPH|9843|hephaestin
hg18_v1_chr11_+_6854431_6854454	0.234519	SOX2.p2	BC137024|OR10A4|283297|olfactory receptor, family 10, subfamily A, member 4	BC137027|OR10A4|283297|olfactory receptor, family 10, subfamily A, member 4	NM_207186|OR10A4|283297|olfactory receptor, family 10, subfamily A, member 4	AF209506|OR10A4|283297|olfactory receptor, family 10, subfamily A, member 4
hg18_v1_chr12_-_56159631_56159692	0.23359	SOX2.p2	AK092763|ARHGAP9|64333|Rho GTPase activating protein 9	NM_001080157|ARHGAP9|64333|Rho GTPase activating protein 9
hg18_v1_chr1_+_157441824_157441850	0.23358	SOX2.p2	NM_001122951|DARC|2532|Duffy blood group, chemokine receptor	AF030521|DARC|2532|Duffy blood group, chemokine receptor	BC095496|DARC|2532|Duffy blood group, chemokine receptor
hg18_v1_chr11_-_20138445_20138445	0.233371	SOX2.p2	NM_001029865|DBX1|120237|developing brain homeobox 1
hg18_v1_chr9_-_124370576_124370658	0.23335	SOX2.p2	NM_001004454|OR1L8|138881|olfactory receptor, family 1, subfamily L, member 8	BC140910|OR1L8|138881|olfactory receptor, family 1, subfamily L, member 8
hg18_v1_chr7_-_141187689_141187753	0.233305	SOX2.p2	AK172866|PRSS37|136242|protease, serine, 37	NM_001008270|PRSS37|136242|protease, serine, 37	NM_001171951|PRSS37|136242|protease, serine, 37	AK097648|PRSS37|136242|protease, serine, 37
hg18_v1_chr9_-_85773899_85773933	0.233144	SOX2.p2	BC013220|HNRNPK|3190|heterogeneous nuclear ribonucleoprotein K
hg18_v1_chr16_-_83703496_83703614	0.232862	SOX2.p2	BC093665|FAM92B|339145|family with sequence similarity 92, member B	BC111944|FAM92B|339145|family with sequence similarity 92, member B	AK126284|FAM92B|339145|family with sequence similarity 92, member B	NM_198491|FAM92B|339145|family with sequence similarity 92, member B
hg18_v1_chr2_+_152900076_152900362	0.232287	SOX2.p2	BC113878|FMNL2|114793|formin-like 2	BC114438|FMNL2|114793|formin-like 2	AB067489|FMNL2|114793|formin-like 2	BC167159|FMNL2|114793|formin-like 2
hg18_v1_chr7_+_149200937_149201013	0.232251	SOX2.p2	AF452639|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2	AK057700|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2	NM_001100592|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2	NM_145230|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2
hg18_v1_chr12_-_101398503_101398521	0.232196	SOX2.p2	AB209184|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	NM_000618|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	NM_001111283|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	NM_001111285|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg18_v1_chr8_+_102574012_102574172	0.23209	SOX2.p2	AK023844|GRHL2|79977|grainyhead-like 2 (Drosophila)	AK292853|GRHL2|79977|grainyhead-like 2 (Drosophila)	BC069618|GRHL2|79977|grainyhead-like 2 (Drosophila)	BC069633|GRHL2|79977|grainyhead-like 2 (Drosophila)	BC069638|GRHL2|79977|grainyhead-like 2 (Drosophila)	BC129822|GRHL2|79977|grainyhead-like 2 (Drosophila)	BC129823|GRHL2|79977|grainyhead-like 2 (Drosophila)
hg18_v1_chr6_-_42527760_42527842	0.231555	SOX2.p2	AF297872|TRERF1|55809|transcriptional regulating factor 1	NM_033502|TRERF1|55809|transcriptional regulating factor 1	AM404182|TRERF1|55809|transcriptional regulating factor 1	AM404183|TRERF1|55809|transcriptional regulating factor 1	AM404259|TRERF1|55809|transcriptional regulating factor 1	AK308473|TRERF1|55809|transcriptional regulating factor 1
hg18_v1_chr1_-_54644269_54644483	0.231448	SOX2.p2	AK289474|SSBP3|23648|single stranded DNA binding protein 3	BC003605|SSBP3|23648|single stranded DNA binding protein 3	BC066365|SSBP3|23648|single stranded DNA binding protein 3	AF500116|SSBP3|23648|single stranded DNA binding protein 3
hg18_v1_chr5_+_138706029_138706097	0.231315	SOX2.p2	BC048106|PAIP2|51247|poly(A) binding protein interacting protein 2	NM_001033112|PAIP2|51247|poly(A) binding protein interacting protein 2	BC062718|PAIP2|51247|poly(A) binding protein interacting protein 2	BC039337|PAIP2|51247|poly(A) binding protein interacting protein 2
hg18_v1_chr12_-_51173238_51173447	0.230589	SOX2.p2	BT006899|KRT6A|3853|keratin 6A	BC125058|KRT6A|3853|keratin 6A	BC139753|KRT6A|3853|keratin 6A	DQ890619|KRT6A|3853|keratin 6A	DQ893788|KRT6A|3853|keratin 6A	BC069269|KRT6A|3853|keratin 6A	BC008807|KRT6A|3853|keratin 6A	BC014152|KRT6A|3853|keratin 6A	AK299386|KRT6A|3853|keratin 6A	AK299428|KRT6A|3853|keratin 6A	AK301686|KRT6A|3853|keratin 6A	AK290245|KRT6A|3853|keratin 6A	NM_005554|KRT6A|3853|keratin 6A
hg18_v1_chr18_+_3584056_3584228	0.230088	SOX2.p2	AK093095|FLJ35776|649446|hypothetical LOC649446	BC137437|FLJ35776|649446|hypothetical LOC649446
hg18_v1_chr16_-_3870121_3870121	0.230088	SOX2.p2	AB210043|CREBBP|1387|CREB binding protein	NM_001079846|CREBBP|1387|CREB binding protein	NM_004380|CREBBP|1387|CREB binding protein
hg18_v1_chr11_-_123353607_123353697	0.229688	SOX2.p2	NM_001004474|OR10S1|219873|olfactory receptor, family 10, subfamily S, member 1	BC137037|OR10S1|219873|olfactory receptor, family 10, subfamily S, member 1	BC137038|OR10S1|219873|olfactory receptor, family 10, subfamily S, member 1
hg18_v1_chr1_+_154318954_154319041	0.22946	SOX2.p2	AK056143|LMNA|4000|lamin A/C
hg18_v1_chr12_-_119733062_119733071	0.229138	SOX2.p2	AK074916|SPPL3|121665|signal peptide peptidase 3
hg18_v1_chr4_+_77575276_77575276	0.228929	SOX2.p2	AB055660|SHROOM3|57619|shroom family member 3	NM_020859|SHROOM3|57619|shroom family member 3
hg18_v1_chr2_-_157890400_157890661	0.228796	SOX2.p2	AB033015|ERMN|57471|ermin, ERM-like protein	DQ334271|ERMN|57471|ermin, ERM-like protein	BC026345|ERMN|57471|ermin, ERM-like protein	AK295844|ERMN|57471|ermin, ERM-like protein	NM_020711|ERMN|57471|ermin, ERM-like protein
hg18_v1_chr3_+_9748769_9748804	0.228543	SOX2.p2	M91585|BRPF1|7862|bromodomain and PHD finger containing, 1
hg18_v1_chr7_+_142670711_142670738	0.228515	SOX2.p2	BC063425|GSTK1|373156|glutathione S-transferase kappa 1	CR597274|GSTK1|373156|glutathione S-transferase kappa 1	AM393732|GSTK1|373156|glutathione S-transferase kappa 1	BC050715|GSTK1|373156|glutathione S-transferase kappa 1	CR613327|GSTK1|373156|glutathione S-transferase kappa 1	AK299968|GSTK1|373156|glutathione S-transferase kappa 1	CR533445|GSTK1|373156|glutathione S-transferase kappa 1	CR605600|GSTK1|373156|glutathione S-transferase kappa 1
hg18_v1_chr7_-_135263737_135263901	0.22813	SOX2.p2	AF130088|LUZP6|767558|leucine zipper protein 6	CR625657|MTPN|136319|myotrophin	CR611568|MTPN|136319|myotrophin	CR599361|MTPN|136319|myotrophin
hg18_v1_chr15_+_64781723_64781734	0.227838	SOX2.p2	AF035528|SMAD6|4091|SMAD family member 6	NM_005585|SMAD6|4091|SMAD family member 6
hg18_v1_chr5_-_95184221_95184464	0.227792	SOX2.p2	NM_001118890|GLRX|2745|glutaredoxin (thioltransferase)	NM_002064|GLRX|2745|glutaredoxin (thioltransferase)	CR593859|GLRX|2745|glutaredoxin (thioltransferase)
hg18_v1_chr1_+_179269689_179269760	0.226855	SOX2.p2	AK304645|MR1|3140|major histocompatibility complex, class I-related	AK290374|MR1|3140|major histocompatibility complex, class I-related	AK222910|MR1|3140|major histocompatibility complex, class I-related	CR602405|MR1|3140|major histocompatibility complex, class I-related
hg18_v1_chr1_+_196874759_196874833	0.226772	SOX2.p2	NM_002838|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	NM_080921|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	NM_080923|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	AK308217|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	AK310898|PTPRC|5788|protein tyrosine phosphatase, receptor type, C
hg18_v1_chr18_+_70352649_70352721	0.226339	SOX2.p2	AK308716|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	NM_032649|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	AY358756|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	CR610360|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)
hg18_v1_chr1_-_205186330_205186438	0.226163	SOX2.p2	BC110494|PIGR|5284|polymeric immunoglobulin receptor	BC110495|PIGR|5284|polymeric immunoglobulin receptor	CR749533|PIGR|5284|polymeric immunoglobulin receptor	S62403|PIGR|5284|polymeric immunoglobulin receptor	AF272149|PIGR|5284|polymeric immunoglobulin receptor	X73079|PIGR|5284|polymeric immunoglobulin receptor	AK225471|PIGR|5284|polymeric immunoglobulin receptor	NM_002644|PIGR|5284|polymeric immunoglobulin receptor
hg18_v1_chr18_-_3864252_3864316	0.225502	SOX2.p2	AK299880|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1
hg18_v1_chr11_+_5466490_5466490	0.225327	SOX2.p2	BC136928|OR52D1|390066|olfactory receptor, family 52, subfamily D, member 1	BC136930|OR52D1|390066|olfactory receptor, family 52, subfamily D, member 1	NM_001005163|OR52D1|390066|olfactory receptor, family 52, subfamily D, member 1
hg18_v1_chr18_-_31178415_31178423	0.225229	SOX2.p2	AK291246|ZNF24|7572|zinc finger protein 24	NM_006965|ZNF24|7572|zinc finger protein 24
hg18_v1_chr14_-_56342097_56342097	0.225209	SOX2.p2	NM_172337|OTX2|5015|orthodenticle homeobox 2
hg18_v1_chr7_-_107667728_107667849	0.225104	SOX2.p2	AJ001057|NRCAM|4897|neuronal cell adhesion molecule	NM_001037132|NRCAM|4897|neuronal cell adhesion molecule
hg18_v1_chr15_-_72282146_72282272	0.224912	SOX2.p2	AK298928|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)	AF370419|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)	BC025256|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)	AK309676|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)	NM_001199042|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)	NM_022369|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)
hg18_v1_chr17_+_16886491_16886887	0.224756	SOX2.p2	BC136479|MPRIP|23164|myosin phosphatase Rho interacting protein	AB098507|MPRIP|23164|myosin phosphatase Rho interacting protein	NM_015134|MPRIP|23164|myosin phosphatase Rho interacting protein	NM_201274|MPRIP|23164|myosin phosphatase Rho interacting protein	AB189741|MPRIP|23164|myosin phosphatase Rho interacting protein	AY296247|MPRIP|23164|myosin phosphatase Rho interacting protein
hg18_v1_chrX_-_41667174_41667365	0.22362	SOX2.p2	AB208859|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	AY705392|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	AF035582|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	BC117311|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	BC143454|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	BC143456|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	AF032119|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	NM_001126054|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	NM_001126055|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	NM_003688|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	AK313399|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)
hg18_v1_chr15_-_81037554_81037627	0.223452	SOX2.p2	BC035348|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1	AK023265|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1	AK301728|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1	AF329403|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1	NM_001079533|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1	NM_001079534|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1	NM_001079535|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1
hg18_v1_chr20_-_30703219_30703443	0.222912	SOX2.p2	BC105014|C20orf203|284805|chromosome 20 open reading frame 203	BC105042|C20orf203|284805|chromosome 20 open reading frame 203	AK091025|C20orf203|284805|chromosome 20 open reading frame 203	NM_182584|C20orf203|284805|chromosome 20 open reading frame 203
hg18_v1_chrX_+_10084984_10085125	0.222437	SOX2.p2	NM_001830|CLCN4|1183|chloride channel 4	AK225287|CLCN4|1183|chloride channel 4	X77197|CLCN4|1183|chloride channel 4	AK289564|CLCN4|1183|chloride channel 4	BC130278|CLCN4|1183|chloride channel 4
hg18_v1_chr7_-_86526880_86526949	0.220658	SOX2.p2	NM_001142749|KIAA1324L|222223|KIAA1324-like
hg18_v1_chr12_-_9804682_9804763	0.220017	SOX2.p2	AY238518|CD69|969|CD69 molecule	DQ893175|CD69|969|CD69 molecule	DQ896474|CD69|969|CD69 molecule	L07555|CD69|969|CD69 molecule	AK291869|CD69|969|CD69 molecule	AK303174|CD69|969|CD69 molecule	AK303383|CD69|969|CD69 molecule	BC007037|CD69|969|CD69 molecule	NM_001781|CD69|969|CD69 molecule	Z22576|CD69|969|CD69 molecule
hg18_v1_chr1_+_1351370_1351388	0.219951	SOX2.p2	NM_001146685|TMEM88B|643965|transmembrane protein 88B
hg18_v1_chr1_+_199259664_199259757	0.219931	SOX2.p2	
hg18_v1_chr5_+_139008052_139008065	0.219417	SOX2.p2	AK024338|CXXC5|51523|CXXC finger protein 5
hg18_v1_chr1_+_203503214_203503300	0.218592	SOX2.p2	AY358192|TMCC2|9911|transmembrane and coiled-coil domain family 2
hg18_v1_chr4_+_71713324_71713324	0.218378	SOX2.p2	AF125373|ENAM|10117|enamelin	NM_031889|ENAM|10117|enamelin
hg18_v1_chr2_+_190981257_190981360	0.21796	SOX2.p2	AK127176|MFSD6|54842|major facilitator superfamily domain containing 6	NM_017694|MFSD6|54842|major facilitator superfamily domain containing 6
hg18_v1_chr4_-_54152480_54152522	0.217048	SOX2.p2	AK056823|LNX1|84708|ligand of numb-protein X 1	NM_001126328|LNX1|84708|ligand of numb-protein X 1
hg18_v1_chr1_-_120240635_120240660	0.215975	SOX2.p2	NM_021794|ADAM30|11085|ADAM metallopeptidase domain 30	BC028372|ADAM30|11085|ADAM metallopeptidase domain 30	AY358734|ADAM30|11085|ADAM metallopeptidase domain 30	AK292483|ADAM30|11085|ADAM metallopeptidase domain 30
hg18_v1_chr1_+_109221271_109221349	0.215775	SOX2.p2	AK295563|GPSM2|29899|G-protein signaling modulator 2	BC027732|GPSM2|29899|G-protein signaling modulator 2
hg18_v1_chr5_-_39461054_39461095	0.215678	SOX2.p2	NM_001343|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)
hg18_v1_chr6_+_14032655_14032655	0.215605	SOX2.p2	NM_001165034|RNF182|221687|ring finger protein 182
hg18_v1_chr9_+_136358134_136358139	0.215549	SOX2.p2	BC063827|RXRA|6256|retinoid X receptor, alpha	NM_002957|RXRA|6256|retinoid X receptor, alpha
hg18_v1_chr3_+_38282301_38282400	0.215548	SOX2.p2	NM_004256|SLC22A13|9390|solute carrier family 22 (organic anion transporter), member 13	AK315301|SLC22A13|9390|solute carrier family 22 (organic anion transporter), member 13	BC035973|SLC22A13|9390|solute carrier family 22 (organic anion transporter), member 13	AB010438|SLC22A13|9390|solute carrier family 22 (organic anion transporter), member 13	AK298375|SLC22A13|9390|solute carrier family 22 (organic anion transporter), member 13
hg18_v1_chr15_-_99609648_99609668	0.215498	SOX2.p2	BC046247|CHSY1|22856|chondroitin sulfate synthase 1	AY358529|CHSY1|22856|chondroitin sulfate synthase 1	AB023207|CHSY1|22856|chondroitin sulfate synthase 1	NM_014918|CHSY1|22856|chondroitin sulfate synthase 1
hg18_v1_chr12_-_101398470_101398474	0.214933	SOX2.p2	M11568|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg18_v1_chr7_+_2638108_2638150	0.214639	SOX2.p2	NM_025250|TTYH3|80727|tweety homolog 3 (Drosophila)	AB051478|TTYH3|80727|tweety homolog 3 (Drosophila)	BC152447|TTYH3|80727|tweety homolog 3 (Drosophila)
hg18_v1_chr5_-_114659863_114659885	0.214392	SOX2.p2	BC031242|CCDC112|153733|coiled-coil domain containing 112	NM_152549|CCDC112|153733|coiled-coil domain containing 112
hg18_v1_chr1_+_90233238_90233371	0.214343	SOX2.p2	NM_182975|ZNF326|284695|zinc finger protein 326	NM_182976|ZNF326|284695|zinc finger protein 326	BC052645|ZNF326|284695|zinc finger protein 326	BC061521|ZNF326|284695|zinc finger protein 326	BC038454|ZNF326|284695|zinc finger protein 326	BC090866|ZNF326|284695|zinc finger protein 326	AK000410|ZNF326|284695|zinc finger protein 326	BC053888|ZNF326|284695|zinc finger protein 326	BC014899|ZNF326|284695|zinc finger protein 326	BC070341|ZNF326|284695|zinc finger protein 326	BC013102|ZNF326|284695|zinc finger protein 326	AK303707|ZNF326|284695|zinc finger protein 326	AK297073|ZNF326|284695|zinc finger protein 326
hg18_v1_chr1_+_216585298_216585370	0.214314	SOX2.p2	NM_001135599|TGFB2|7042|transforming growth factor, beta 2	NM_003238|TGFB2|7042|transforming growth factor, beta 2	AB209842|TGFB2|7042|transforming growth factor, beta 2
hg18_v1_chr3_-_152478843_152478919	0.21383	SOX2.p2	BC034989|P2RY14|9934|purinergic receptor P2Y, G-protein coupled, 14	D13626|P2RY14|9934|purinergic receptor P2Y, G-protein coupled, 14	NM_014879|P2RY14|9934|purinergic receptor P2Y, G-protein coupled, 14
hg18_v1_chr14_+_73884918_73884927	0.213487	SOX2.p2	NM_018228|VRTN|55237|vertebrae development homolog (pig)
hg18_v1_chr13_-_40491491_40491507	0.213427	SOX2.p2	NM_172373|ELF1|1997|E74-like factor 1 (ets domain transcription factor)
hg18_v1_chr17_+_69939130_69939269	0.213231	SOX2.p2	BC110848|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C	BC004925|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C	BC069202|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C	NM_022036|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C	BC125080|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C	BC125081|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C
hg18_v1_chr13_-_40491405_40491482	0.213161	SOX2.p2	M82882|ELF1|1997|E74-like factor 1 (ets domain transcription factor)
hg18_v1_chrX_-_137649180_137649180	0.21311	SOX2.p2	AF100144|FGF13|2258|fibroblast growth factor 13	NM_033642|FGF13|2258|fibroblast growth factor 13
hg18_v1_chr7_+_129771865_129771936	0.211648	SOX2.p2	NM_001127441|CPA5|93979|carboxypeptidase A5	NM_001127442|CPA5|93979|carboxypeptidase A5	NM_080385|CPA5|93979|carboxypeptidase A5	AK093288|CPA5|93979|carboxypeptidase A5	AK315256|CPA5|93979|carboxypeptidase A5	BC039362|CPA5|93979|carboxypeptidase A5	AY155230|CPA5|93979|carboxypeptidase A5	BC053681|CPA5|93979|carboxypeptidase A5	BC042996|CPA5|93979|carboxypeptidase A5	AK131191|CPA5|93979|carboxypeptidase A5	AY155229|CPA5|93979|carboxypeptidase A5
hg18_v1_chr12_-_101398451_101398453	0.211483	SOX2.p2	AK312231|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	X57025|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg18_v1_chr3_+_138159396_138159645	0.21131	SOX2.p2	AY358305|IL20RB|53833|interleukin 20 receptor beta	NM_144717|IL20RB|53833|interleukin 20 receptor beta	AK316084|IL20RB|53833|interleukin 20 receptor beta	AK296832|IL20RB|53833|interleukin 20 receptor beta	BC063696|IL20RB|53833|interleukin 20 receptor beta	CR590848|IL20RB|53833|interleukin 20 receptor beta	CR604488|IL20RB|53833|interleukin 20 receptor beta	BC033292|IL20RB|53833|interleukin 20 receptor beta
hg18_v1_chr1_+_6607796_6607865	0.211207	SOX2.p2	NM_001195752|THAP3|90326|THAP domain containing, apoptosis associated protein 3	NM_138350|THAP3|90326|THAP domain containing, apoptosis associated protein 3	CR601567|THAP3|90326|THAP domain containing, apoptosis associated protein 3	AK096217|THAP3|90326|THAP domain containing, apoptosis associated protein 3	BC022081|THAP3|90326|THAP domain containing, apoptosis associated protein 3	CR609298|THAP3|90326|THAP domain containing, apoptosis associated protein 3	CR600833|THAP3|90326|THAP domain containing, apoptosis associated protein 3	CR620139|THAP3|90326|THAP domain containing, apoptosis associated protein 3	DQ891670|THAP3|90326|THAP domain containing, apoptosis associated protein 3	DQ894856|THAP3|90326|THAP domain containing, apoptosis associated protein 3
hg18_v1_chr2_-_152299229_152299246	0.210861	SOX2.p2	AK096903|NEB|4703|nebulin	AK307607|NEB|4703|nebulin	BC029384|NEB|4703|nebulin	BC012533|NEB|4703|nebulin	BC056251|NEB|4703|nebulin	BC105590|NEB|4703|nebulin	NM_001164507|NEB|4703|nebulin	NM_001164508|NEB|4703|nebulin	NM_004543|NEB|4703|nebulin
hg18_v1_chr3_+_185253528_185253537	0.210261	SOX2.p2	AF459285|HTR3C|170572|5-hydroxytryptamine (serotonin) receptor 3, family member C	NM_130770|HTR3C|170572|5-hydroxytryptamine (serotonin) receptor 3, family member C	BC131799|HTR3C|170572|5-hydroxytryptamine (serotonin) receptor 3, family member C
hg18_v1_chr2_-_39201631_39201695	0.210084	SOX2.p2	AK290228|SOS1|6654|son of sevenless homolog 1 (Drosophila)
hg18_v1_chr1_+_43628186_43628226	0.209795	SOX2.p2	BC051343|C1orf84|149469|chromosome 1 open reading frame 84	AK091821|C1orf84|149469|chromosome 1 open reading frame 84
hg18_v1_chr15_-_87565813_87566007	0.209622	SOX2.p2	AK312457|RLBP1|6017|retinaldehyde binding protein 1	BC004199|RLBP1|6017|retinaldehyde binding protein 1	NM_000326|RLBP1|6017|retinaldehyde binding protein 1	DQ980611|RLBP1|6017|retinaldehyde binding protein 1
hg18_v1_chrX_-_33267646_33267646	0.209488	SOX2.p2	NM_000109|DMD|1756|dystrophin
hg18_v1_chr1_-_203592538_203592788	0.209257	SOX2.p2	AK299227|KLHDC8A|55220|kelch domain containing 8A	AK001610|KLHDC8A|55220|kelch domain containing 8A	NM_018203|KLHDC8A|55220|kelch domain containing 8A	AK096590|KLHDC8A|55220|kelch domain containing 8A
hg18_v1_chr7_+_73136254_73136286	0.208946	SOX2.p2	AF134379|LIMK1|3984|LIM domain kinase 1
hg18_v1_chr17_+_52688842_52689102	0.208499	SOX2.p2	BC001526|MSI2|124540|musashi homolog 2 (Drosophila)	NM_138962|MSI2|124540|musashi homolog 2 (Drosophila)	DQ892317|MSI2|124540|musashi homolog 2 (Drosophila)	DQ895519|MSI2|124540|musashi homolog 2 (Drosophila)
hg18_v1_chr2_+_187163232_187163312	0.208374	SOX2.p2	EF560727|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)	M14648|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)
hg18_v1_chr12_+_94135645_94136005	0.208226	SOX2.p2	NM_017599|VEZT|55591|vezatin, adherens junctions transmembrane protein	AK001338|VEZT|55591|vezatin, adherens junctions transmembrane protein	AK225303|VEZT|55591|vezatin, adherens junctions transmembrane protein	AK309943|VEZT|55591|vezatin, adherens junctions transmembrane protein	AK225356|VEZT|55591|vezatin, adherens junctions transmembrane protein	BC014443|VEZT|55591|vezatin, adherens junctions transmembrane protein	AK307864|VEZT|55591|vezatin, adherens junctions transmembrane protein	AL137497|VEZT|55591|vezatin, adherens junctions transmembrane protein	BC064939|VEZT|55591|vezatin, adherens junctions transmembrane protein	BC028597|VEZT|55591|vezatin, adherens junctions transmembrane protein
hg18_v1_chr10_+_69314714_69314882	0.208154	SOX2.p2	AL136741|SIRT1|23411|sirtuin 1	BC012499|SIRT1|23411|sirtuin 1
hg18_v1_chrX_+_11221453_11221474	0.207683	SOX2.p2	AF436849|AMELX|265|amelogenin, X-linked	BC069118|AMELX|265|amelogenin, X-linked	M86932|AMELX|265|amelogenin, X-linked	NM_001142|AMELX|265|amelogenin, X-linked	NM_182680|AMELX|265|amelogenin, X-linked	NM_182681|AMELX|265|amelogenin, X-linked	BC074951|AMELX|265|amelogenin, X-linked
hg18_v1_chr1_+_144004589_144004727	0.207639	SOX2.p2	AY894562|NBPF8|728841|neuroblastoma breakpoint family, member 8	AY894565|NBPF10|100132406|neuroblastoma breakpoint family, member 10	AY894570|NBPF8|728841|neuroblastoma breakpoint family, member 8	NM_001039703|NBPF10|100132406|neuroblastoma breakpoint family, member 10
hg18_v1_chr3_+_38470782_38470813	0.207631	SOX2.p2	NM_001106|ACVR2B|93|activin A receptor, type IIB	BC096243|ACVR2B|93|activin A receptor, type IIB	BC096244|ACVR2B|93|activin A receptor, type IIB	BC096245|ACVR2B|93|activin A receptor, type IIB	BC099642|ACVR2B|93|activin A receptor, type IIB	X77533|ACVR2B|93|activin A receptor, type IIB
hg18_v1_chr8_-_96030719_96030948	0.207576	SOX2.p2	AK315071|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1	AF409114|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1	AF409115|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1	AK125880|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1	NM_001135733|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1	NM_033285|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1
hg18_v1_chr11_+_59001421_59001478	0.207393	SOX2.p2	BC136893|OR4D10|390197|olfactory receptor, family 4, subfamily D, member 10	BC136894|OR4D10|390197|olfactory receptor, family 4, subfamily D, member 10	NM_001004705|OR4D10|390197|olfactory receptor, family 4, subfamily D, member 10
hg18_v1_chr19_-_55046718_55046780	0.20719	SOX2.p2	BC043359|LOC100506033|100506033|hypothetical LOC100506033
hg18_v1_chr16_+_68284252_68284329	0.206445	SOX2.p2	U80231|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive	AK000312|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive
hg18_v1_chrX_-_106336199_106336325	0.206134	SOX2.p2	AK000137|NUP62CL|54830|nucleoporin 62kDa C-terminal like	CR605049|NUP62CL|54830|nucleoporin 62kDa C-terminal like	BC016327|NUP62CL|54830|nucleoporin 62kDa C-terminal like	BC017799|NUP62CL|54830|nucleoporin 62kDa C-terminal like	NM_017681|NUP62CL|54830|nucleoporin 62kDa C-terminal like
hg18_v1_chr21_+_34658192_34658241	0.206038	SOX2.p2	AF302095|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2	DQ192290|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2	NM_172201|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2	BC112087|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2	BC093892|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2
hg18_v1_chr10_+_92970302_92970474	0.205825	SOX2.p2	NM_032373|PCGF5|84333|polycomb group ring finger 5
hg18_v1_chr5_+_140460240_140460417	0.205625	SOX2.p2	AK313451|PCDHB3|56132|protocadherin beta 3	BC104817|PCDHB3|56132|protocadherin beta 3	AF152496|PCDHB3|56132|protocadherin beta 3	AF217755|PCDHB3|56132|protocadherin beta 3	NM_018937|PCDHB3|56132|protocadherin beta 3
hg18_v1_chr4_+_123311207_123311207	0.205543	SOX2.p2	DQ335469|KIAA1109|84162|KIAA1109	NM_015312|KIAA1109|84162|KIAA1109
hg18_v1_chr8_-_8788149_8788547	0.205442	SOX2.p2	NM_004225|MFHAS1|9258|malignant fibrous histiocytoma amplified sequence 1
hg18_v1_chr6_-_30763650_30763650	0.205141	SOX2.p2	AK124880|KIAA1949|170954|KIAA1949	NM_133471|KIAA1949|170954|KIAA1949
hg18_v1_chr13_-_93929719_93929936	0.205045	SOX2.p2	AK293115|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	BC028311|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	DQ902581|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	S69231|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	L18967|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	AJ000503|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	D17547|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	NM_001129889|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	NM_001922|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)
hg18_v1_chr4_-_47709717_47709717	0.204973	SOX2.p2	AK292021|CNGA1|1259|cyclic nucleotide gated channel alpha 1	NM_000087|CNGA1|1259|cyclic nucleotide gated channel alpha 1
hg18_v1_chr18_-_31178379_31178414	0.204958	SOX2.p2	AF038964|ZNF24|7572|zinc finger protein 24	BC003566|ZNF24|7572|zinc finger protein 24	U68536|ZNF24|7572|zinc finger protein 24	BC016801|ZNF24|7572|zinc finger protein 24
hg18_v1_chr1_-_27802688_27802729	0.204688	SOX2.p2	NM_001029882|AHDC1|27245|AT hook, DNA binding motif, containing 1
hg18_v1_chr8_-_108579270_108579458	0.204413	SOX2.p2	U83508|ANGPT1|284|angiopoietin 1	BC152411|ANGPT1|284|angiopoietin 1	BC152419|ANGPT1|284|angiopoietin 1	D13628|ANGPT1|284|angiopoietin 1	AY055342|ANGPT1|284|angiopoietin 1	NM_001146|ANGPT1|284|angiopoietin 1	BX648814|ANGPT1|284|angiopoietin 1
hg18_v1_chr10_-_50066386_50066479	0.204013	SOX2.p2	DQ884399|C10orf128|170371|chromosome 10 open reading frame 128	BC047724|C10orf128|170371|chromosome 10 open reading frame 128	BC104438|C10orf128|170371|chromosome 10 open reading frame 128	BC104439|C10orf128|170371|chromosome 10 open reading frame 128	NM_001010863|C10orf128|170371|chromosome 10 open reading frame 128	CR624206|C10orf128|170371|chromosome 10 open reading frame 128	CR618023|C10orf128|170371|chromosome 10 open reading frame 128	CR607332|C10orf128|170371|chromosome 10 open reading frame 128	BC037922|C10orf128|170371|chromosome 10 open reading frame 128	BC042857|C10orf128|170371|chromosome 10 open reading frame 128
hg18_v1_chr22_-_34566210_34566264	0.204011	SOX2.p2	AY960684|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	CU013159|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	CU013447|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	DQ891720|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	DQ894897|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	DQ894898|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2
hg18_v1_chr6_+_29902734_29902734	0.204	SOX2.p2	AK302054|HLA-G|3135|major histocompatibility complex, class I, G	NM_002127|HLA-G|3135|major histocompatibility complex, class I, G
hg18_v1_chr3_+_186563529_186563723	0.203863	SOX2.p2	AK296961|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13	AB001872|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13	NM_004721|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13	BC111726|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13
hg18_v1_chr12_-_106679038_106679043	0.203086	SOX2.p2	NM_012406|PRDM4|11108|PR domain containing 4
hg18_v1_chr3_-_46879883_46879976	0.202562	SOX2.p2	AF174483|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow	X07373|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow	M24122|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow	AK312044|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow	BC009790|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow	NM_000258|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow
hg18_v1_chr9_+_90193058_90193248	0.202495	SOX2.p2	NM_006717|SPIN1|10927|spindlin 1	BC013571|SPIN1|10927|spindlin 1	AL136719|SPIN1|10927|spindlin 1	AK092017|SPIN1|10927|spindlin 1	AF087864|SPIN1|10927|spindlin 1	AF106682|SPIN1|10927|spindlin 1	AK290009|SPIN1|10927|spindlin 1
hg18_v1_chr1_-_205161821_205162000	0.202269	SOX2.p2	BT006797|FAIM3|9214|Fas apoptotic inhibitory molecule 3	DQ890699|FAIM3|9214|Fas apoptotic inhibitory molecule 3	HM480394|FAIM3|9214|Fas apoptotic inhibitory molecule 3	AF057557|FAIM3|9214|Fas apoptotic inhibitory molecule 3	NM_001193338|FAIM3|9214|Fas apoptotic inhibitory molecule 3	GQ160900|FAIM3|9214|Fas apoptotic inhibitory molecule 3	GQ160901|FAIM3|9214|Fas apoptotic inhibitory molecule 3	CR625287|FAIM3|9214|Fas apoptotic inhibitory molecule 3	AK292007|FAIM3|9214|Fas apoptotic inhibitory molecule 3	AK297053|FAIM3|9214|Fas apoptotic inhibitory molecule 3	AK301187|FAIM3|9214|Fas apoptotic inhibitory molecule 3	AK316336|FAIM3|9214|Fas apoptotic inhibitory molecule 3	BC006401|FAIM3|9214|Fas apoptotic inhibitory molecule 3	NM_001142473|FAIM3|9214|Fas apoptotic inhibitory molecule 3	NM_005449|FAIM3|9214|Fas apoptotic inhibitory molecule 3
hg18_v1_chr8_+_75899326_75899326	0.202266	SOX2.p2	CR749657|PI15|51050|peptidase inhibitor 15	NM_015886|PI15|51050|peptidase inhibitor 15
hg18_v1_chrX_+_84385649_84385658	0.20226	SOX2.p2	NM_021998|ZNF711|7552|zinc finger protein 711
hg18_v1_chr1_-_53566171_53566330	0.201419	SOX2.p2	Z75190|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	D50678|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	BC051836|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	NM_001018054|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	NM_004631|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	NM_017522|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
hg18_v1_chr17_+_69939806_69939877	0.201415	SOX2.p2	CR597806|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C	AK075397|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C	AF207989|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C	CR592340|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C	AK222909|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C	AK000249|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C
hg18_v1_chr10_+_63331401_63331474	0.201221	SOX2.p2	AK296921|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)	BC107800|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)	BC056680|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)
hg18_v1_chr19_-_53081383_53081465	0.201199	SOX2.p2	BC020755|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1	CR608228|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1	L02337|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1	S43859|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1	U08025|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1	AK313415|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1	AK289380|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1	NM_003167|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1
hg18_v1_chr12_-_86947276_86947306	0.200519	SOX2.p2	AL833338|C12orf50|160419|chromosome 12 open reading frame 50	BC062424|C12orf50|160419|chromosome 12 open reading frame 50	AK093140|C12orf50|160419|chromosome 12 open reading frame 50	NM_152589|C12orf50|160419|chromosome 12 open reading frame 50
hg18_v1_chr12_+_67919619_67919693	0.200325	SOX2.p2	CR623508|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	BC005000|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	BC000714|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	X67337|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	CR601123|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	AK292024|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	DQ892159|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	EU176688|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa
hg18_v1_chr3_-_120761092_120761170	0.200156	SOX2.p2	M27533|CD80|941|CD80 molecule	BC042665|CD80|941|CD80 molecule	AK292129|CD80|941|CD80 molecule	NM_005191|CD80|941|CD80 molecule
hg18_v1_chr5_+_176955595_176955637	0.19997	SOX2.p2	
hg18_v1_chr1_-_163680941_163681215	0.199903	SOX2.p2	BC012063|RXRG|6258|retinoid X receptor, gamma	CR596807|RXRG|6258|retinoid X receptor, gamma	AK312922|RXRG|6258|retinoid X receptor, gamma	NM_006917|RXRG|6258|retinoid X receptor, gamma
hg18_v1_chr11_+_94398069_94398069	0.19977	SOX2.p2	BC157851|KDM4DL|390245|lysine (K)-specific demethylase 4D-like	NM_001161630|KDM4DL|390245|lysine (K)-specific demethylase 4D-like
hg18_v1_chr5_+_139008091_139008137	0.199694	SOX2.p2	BC006428|CXXC5|51523|CXXC finger protein 5	CR611313|CXXC5|51523|CXXC finger protein 5	CR614582|CXXC5|51523|CXXC finger protein 5
hg18_v1_chr15_-_72282452_72282498	0.199512	SOX2.p2	AK310878|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)	AK291966|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)
hg18_v1_chrX_+_64625339_64625430	0.199448	SOX2.p2	BC140767|ZC3H12B|340554|zinc finger CCCH-type containing 12B	BC171781|ZC3H12B|340554|zinc finger CCCH-type containing 12B	NM_001010888|ZC3H12B|340554|zinc finger CCCH-type containing 12B	BX647241|ZC3H12B|340554|zinc finger CCCH-type containing 12B
hg18_v1_chr19_-_52426055_52426316	0.199074	SOX2.p2	U82987|BBC3|27113|BCL2 binding component 3	BC136481|BBC3|27113|BCL2 binding component 3	AF332558|BBC3|27113|BCL2 binding component 3	NM_014417|BBC3|27113|BCL2 binding component 3
hg18_v1_chr3_-_161765765_161765812	0.198888	SOX2.p2	AB002533|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)	DQ890866|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)	DQ894021|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)
hg18_v1_chr1_-_180626804_180626884	0.198609	SOX2.p2	BC031964|GLUL|2752|glutamate-ammonia ligase
hg18_v1_chr15_-_53349775_53349876	0.198201	SOX2.p2	AF125393|RAB27A|5873|RAB27A, member RAS oncogene family	NM_183234|RAB27A|5873|RAB27A, member RAS oncogene family	U57094|RAB27A|5873|RAB27A, member RAS oncogene family	NM_004580|RAB27A|5873|RAB27A, member RAS oncogene family	U38654|RAB27A|5873|RAB27A, member RAS oncogene family
hg18_v1_chr1_+_149395728_149395781	0.197276	SOX2.p2	NM_024575|TNFAIP8L2|79626|tumor necrosis factor, alpha-induced protein 8-like 2	AF271774|TNFAIP8L2|79626|tumor necrosis factor, alpha-induced protein 8-like 2	AL833373|TNFAIP8L2|79626|tumor necrosis factor, alpha-induced protein 8-like 2	AK027120|TNFAIP8L2|79626|tumor necrosis factor, alpha-induced protein 8-like 2	AK225472|TNFAIP8L2|79626|tumor necrosis factor, alpha-induced protein 8-like 2	BC063014|TNFAIP8L2|79626|tumor necrosis factor, alpha-induced protein 8-like 2
hg18_v1_chr3_+_3056307_3056307	0.197144	SOX2.p2	AF464063|CNTN4|152330|contactin 4	NM_175612|CNTN4|152330|contactin 4
hg18_v1_chr2_+_74913289_74913289	0.196913	SOX2.p2	AF086198|HK2|3099|hexokinase 2	NM_000189|HK2|3099|hexokinase 2
hg18_v1_chr15_+_91244422_91244559	0.196884	SOX2.p2	AF006514|CHD2|1106|chromodomain helicase DNA binding protein 2	NM_001042572|CHD2|1106|chromodomain helicase DNA binding protein 2	NM_001271|CHD2|1106|chromodomain helicase DNA binding protein 2	AK292850|CHD2|1106|chromodomain helicase DNA binding protein 2	BC107885|CHD2|1106|chromodomain helicase DNA binding protein 2
hg18_v1_chr12_-_47869067_47869133	0.196467	SOX2.p2	CR617927|TUBA1A|7846|tubulin, alpha 1a	BC006468|TUBA1A|7846|tubulin, alpha 1a	CR621641|TUBA1A|7846|tubulin, alpha 1a	CR596750|TUBA1A|7846|tubulin, alpha 1a	CR606172|TUBA1A|7846|tubulin, alpha 1a	CR608442|TUBA1A|7846|tubulin, alpha 1a	CR610265|TUBA1A|7846|tubulin, alpha 1a	CR607378|TUBA1A|7846|tubulin, alpha 1a	CR615137|TUBA1A|7846|tubulin, alpha 1a	CR618187|TUBA1A|7846|tubulin, alpha 1a	CR620195|TUBA1A|7846|tubulin, alpha 1a	CR595876|TUBA1A|7846|tubulin, alpha 1a	CR608373|TUBA1A|7846|tubulin, alpha 1a	CR605491|TUBA1A|7846|tubulin, alpha 1a	CR607118|TUBA1A|7846|tubulin, alpha 1a	CR590541|TUBA1A|7846|tubulin, alpha 1a	CR591654|TUBA1A|7846|tubulin, alpha 1a	CR597918|TUBA1A|7846|tubulin, alpha 1a	CR598057|TUBA1A|7846|tubulin, alpha 1a	CR598989|TUBA1A|7846|tubulin, alpha 1a	CR602824|TUBA1A|7846|tubulin, alpha 1a	CR604529|TUBA1A|7846|tubulin, alpha 1a	CR605616|TUBA1A|7846|tubulin, alpha 1a	CR607200|TUBA1A|7846|tubulin, alpha 1a	CR610101|TUBA1A|7846|tubulin, alpha 1a	CR611043|TUBA1A|7846|tubulin, alpha 1a	CR616036|TUBA1A|7846|tubulin, alpha 1a	CR621097|TUBA1A|7846|tubulin, alpha 1a	CR622155|TUBA1A|7846|tubulin, alpha 1a	CR623663|TUBA1A|7846|tubulin, alpha 1a	CR624192|TUBA1A|7846|tubulin, alpha 1a	BC050637|TUBA1A|7846|tubulin, alpha 1a	CR590950|TUBA1A|7846|tubulin, alpha 1a	CR592146|TUBA1A|7846|tubulin, alpha 1a	CR593050|TUBA1A|7846|tubulin, alpha 1a	CR595385|TUBA1A|7846|tubulin, alpha 1a	CR596815|TUBA1A|7846|tubulin, alpha 1a	CR597522|TUBA1A|7846|tubulin, alpha 1a	CR598945|TUBA1A|7846|tubulin, alpha 1a	CR601913|TUBA1A|7846|tubulin, alpha 1a	CR602723|TUBA1A|7846|tubulin, alpha 1a	CR604076|TUBA1A|7846|tubulin, alpha 1a	CR606863|TUBA1A|7846|tubulin, alpha 1a	CR607886|TUBA1A|7846|tubulin, alpha 1a	CR608895|TUBA1A|7846|tubulin, alpha 1a	CR609424|TUBA1A|7846|tubulin, alpha 1a	CR610065|TUBA1A|7846|tubulin, alpha 1a	CR612996|TUBA1A|7846|tubulin, alpha 1a	CR616525|TUBA1A|7846|tubulin, alpha 1a	CR616897|TUBA1A|7846|tubulin, alpha 1a	CR605985|TUBA1A|7846|tubulin, alpha 1a	CR593320|TUBA1A|7846|tubulin, alpha 1a	CR621268|TUBA1A|7846|tubulin, alpha 1a	CR594062|TUBA1A|7846|tubulin, alpha 1a	CR596970|TUBA1A|7846|tubulin, alpha 1a	CR596983|TUBA1A|7846|tubulin, alpha 1a	CR600175|TUBA1A|7846|tubulin, alpha 1a	CR604014|TUBA1A|7846|tubulin, alpha 1a	CR614212|TUBA1A|7846|tubulin, alpha 1a	CR624073|TUBA1A|7846|tubulin, alpha 1a	CR591504|TUBA1A|7846|tubulin, alpha 1a	CR593739|TUBA1A|7846|tubulin, alpha 1a	CR604006|TUBA1A|7846|tubulin, alpha 1a	CR622591|TUBA1A|7846|tubulin, alpha 1a	CR623826|TUBA1A|7846|tubulin, alpha 1a	CR625536|TUBA1A|7846|tubulin, alpha 1a	AF141347|TUBA1A|7846|tubulin, alpha 1a	CR592638|TUBA1A|7846|tubulin, alpha 1a	CR614316|TUBA1A|7846|tubulin, alpha 1a	CR593244|TUBA1A|7846|tubulin, alpha 1a	CR593317|TUBA1A|7846|tubulin, alpha 1a	CR600113|TUBA1A|7846|tubulin, alpha 1a	CR600854|TUBA1A|7846|tubulin, alpha 1a	CR602040|TUBA1A|7846|tubulin, alpha 1a	CR606118|TUBA1A|7846|tubulin, alpha 1a	CR607379|TUBA1A|7846|tubulin, alpha 1a	CR608614|TUBA1A|7846|tubulin, alpha 1a	CR614334|TUBA1A|7846|tubulin, alpha 1a	CR616625|TUBA1A|7846|tubulin, alpha 1a	CR618923|TUBA1A|7846|tubulin, alpha 1a	CR619222|TUBA1A|7846|tubulin, alpha 1a	CR621713|TUBA1A|7846|tubulin, alpha 1a	CR626181|TUBA1A|7846|tubulin, alpha 1a	CR592123|TUBA1A|7846|tubulin, alpha 1a	CR593994|TUBA1A|7846|tubulin, alpha 1a	CR601586|TUBA1A|7846|tubulin, alpha 1a	CR609811|TUBA1A|7846|tubulin, alpha 1a	CR612526|TUBA1A|7846|tubulin, alpha 1a	CR598412|TUBA1A|7846|tubulin, alpha 1a	CR607887|TUBA1A|7846|tubulin, alpha 1a	CR619513|TUBA1A|7846|tubulin, alpha 1a	CR600932|TUBA1A|7846|tubulin, alpha 1a	CR604714|TUBA1A|7846|tubulin, alpha 1a	CR605195|TUBA1A|7846|tubulin, alpha 1a	CR614350|TUBA1A|7846|tubulin, alpha 1a	CR616051|TUBA1A|7846|tubulin, alpha 1a	CR621897|TUBA1A|7846|tubulin, alpha 1a	CR626048|TUBA1A|7846|tubulin, alpha 1a	CR591464|TUBA1A|7846|tubulin, alpha 1a	CR618255|TUBA1A|7846|tubulin, alpha 1a	CR592696|TUBA1A|7846|tubulin, alpha 1a	CR600390|TUBA1A|7846|tubulin, alpha 1a	CR604534|TUBA1A|7846|tubulin, alpha 1a	CR616952|TUBA1A|7846|tubulin, alpha 1a	CR618736|TUBA1A|7846|tubulin, alpha 1a	CR625013|TUBA1A|7846|tubulin, alpha 1a	CR590305|TUBA1A|7846|tubulin, alpha 1a	CR590348|TUBA1A|7846|tubulin, alpha 1a	CR590896|TUBA1A|7846|tubulin, alpha 1a	CR591133|TUBA1A|7846|tubulin, alpha 1a	CR591241|TUBA1A|7846|tubulin, alpha 1a	CR591515|TUBA1A|7846|tubulin, alpha 1a	CR593877|TUBA1A|7846|tubulin, alpha 1a	CR594034|TUBA1A|7846|tubulin, alpha 1a	CR594060|TUBA1A|7846|tubulin, alpha 1a	CR594066|TUBA1A|7846|tubulin, alpha 1a	CR594647|TUBA1A|7846|tubulin, alpha 1a	CR595260|TUBA1A|7846|tubulin, alpha 1a	CR595514|TUBA1A|7846|tubulin, alpha 1a	CR596417|TUBA1A|7846|tubulin, alpha 1a	CR596908|TUBA1A|7846|tubulin, alpha 1a	CR598075|TUBA1A|7846|tubulin, alpha 1a	CR598102|TUBA1A|7846|tubulin, alpha 1a	CR598675|TUBA1A|7846|tubulin, alpha 1a	CR599102|TUBA1A|7846|tubulin, alpha 1a	CR599543|TUBA1A|7846|tubulin, alpha 1a	CR600172|TUBA1A|7846|tubulin, alpha 1a	CR600829|TUBA1A|7846|tubulin, alpha 1a	CR602196|TUBA1A|7846|tubulin, alpha 1a	CR602663|TUBA1A|7846|tubulin, alpha 1a	CR602913|TUBA1A|7846|tubulin, alpha 1a	CR603945|TUBA1A|7846|tubulin, alpha 1a	CR604782|TUBA1A|7846|tubulin, alpha 1a	CR604788|TUBA1A|7846|tubulin, alpha 1a	CR605308|TUBA1A|7846|tubulin, alpha 1a	CR605536|TUBA1A|7846|tubulin, alpha 1a	CR608160|TUBA1A|7846|tubulin, alpha 1a	CR608525|TUBA1A|7846|tubulin, alpha 1a	CR608804|TUBA1A|7846|tubulin, alpha 1a	CR608850|TUBA1A|7846|tubulin, alpha 1a	CR610612|TUBA1A|7846|tubulin, alpha 1a	CR610649|TUBA1A|7846|tubulin, alpha 1a	CR611347|TUBA1A|7846|tubulin, alpha 1a	CR612458|TUBA1A|7846|tubulin, alpha 1a	CR612699|TUBA1A|7846|tubulin, alpha 1a	CR613508|TUBA1A|7846|tubulin, alpha 1a	CR613952|TUBA1A|7846|tubulin, alpha 1a	CR615495|TUBA1A|7846|tubulin, alpha 1a	CR615697|TUBA1A|7846|tubulin, alpha 1a	CR615711|TUBA1A|7846|tubulin, alpha 1a	CR615724|TUBA1A|7846|tubulin, alpha 1a	CR616370|TUBA1A|7846|tubulin, alpha 1a	CR616410|TUBA1A|7846|tubulin, alpha 1a	CR616875|TUBA1A|7846|tubulin, alpha 1a	CR616978|TUBA1A|7846|tubulin, alpha 1a	CR616979|TUBA1A|7846|tubulin, alpha 1a	CR616980|TUBA1A|7846|tubulin, alpha 1a	CR618385|TUBA1A|7846|tubulin, alpha 1a	CR618711|TUBA1A|7846|tubulin, alpha 1a	CR618941|TUBA1A|7846|tubulin, alpha 1a	CR619454|TUBA1A|7846|tubulin, alpha 1a	CR619658|TUBA1A|7846|tubulin, alpha 1a	CR619965|TUBA1A|7846|tubulin, alpha 1a	CR620710|TUBA1A|7846|tubulin, alpha 1a	CR620745|TUBA1A|7846|tubulin, alpha 1a	CR620859|TUBA1A|7846|tubulin, alpha 1a	CR622451|TUBA1A|7846|tubulin, alpha 1a	CR622843|TUBA1A|7846|tubulin, alpha 1a	CR624888|TUBA1A|7846|tubulin, alpha 1a	CR625134|TUBA1A|7846|tubulin, alpha 1a	CR625301|TUBA1A|7846|tubulin, alpha 1a	CR626848|TUBA1A|7846|tubulin, alpha 1a	CR592034|TUBA1A|7846|tubulin, alpha 1a	CR593029|TUBA1A|7846|tubulin, alpha 1a	CR603623|TUBA1A|7846|tubulin, alpha 1a	CR613183|TUBA1A|7846|tubulin, alpha 1a	CR618339|TUBA1A|7846|tubulin, alpha 1a	CR623665|TUBA1A|7846|tubulin, alpha 1a	CR626392|TUBA1A|7846|tubulin, alpha 1a	CR604467|TUBA1A|7846|tubulin, alpha 1a	CR601584|TUBA1A|7846|tubulin, alpha 1a	CR604072|TUBA1A|7846|tubulin, alpha 1a	CR614572|TUBA1A|7846|tubulin, alpha 1a	CR617729|TUBA1A|7846|tubulin, alpha 1a	CR618708|TUBA1A|7846|tubulin, alpha 1a	CR590784|TUBA1A|7846|tubulin, alpha 1a	CR615205|TUBA1A|7846|tubulin, alpha 1a	CR590984|TUBA1A|7846|tubulin, alpha 1a	CR591011|TUBA1A|7846|tubulin, alpha 1a	CR591275|TUBA1A|7846|tubulin, alpha 1a	CR591653|TUBA1A|7846|tubulin, alpha 1a	CR591655|TUBA1A|7846|tubulin, alpha 1a	CR592062|TUBA1A|7846|tubulin, alpha 1a	CR592132|TUBA1A|7846|tubulin, alpha 1a	CR592293|TUBA1A|7846|tubulin, alpha 1a	CR592430|TUBA1A|7846|tubulin, alpha 1a	CR592537|TUBA1A|7846|tubulin, alpha 1a	CR592708|TUBA1A|7846|tubulin, alpha 1a	CR593264|TUBA1A|7846|tubulin, alpha 1a	CR593488|TUBA1A|7846|tubulin, alpha 1a	CR594084|TUBA1A|7846|tubulin, alpha 1a	CR594550|TUBA1A|7846|tubulin, alpha 1a	CR595041|TUBA1A|7846|tubulin, alpha 1a	CR595457|TUBA1A|7846|tubulin, alpha 1a	CR596285|TUBA1A|7846|tubulin, alpha 1a	CR596409|TUBA1A|7846|tubulin, alpha 1a	CR596836|TUBA1A|7846|tubulin, alpha 1a	CR597413|TUBA1A|7846|tubulin, alpha 1a	CR597725|TUBA1A|7846|tubulin, alpha 1a	CR598217|TUBA1A|7846|tubulin, alpha 1a	CR598369|TUBA1A|7846|tubulin, alpha 1a	CR598408|TUBA1A|7846|tubulin, alpha 1a	CR598516|TUBA1A|7846|tubulin, alpha 1a	CR598719|TUBA1A|7846|tubulin, alpha 1a	CR598958|TUBA1A|7846|tubulin, alpha 1a	CR598973|TUBA1A|7846|tubulin, alpha 1a	CR599248|TUBA1A|7846|tubulin, alpha 1a	CR599666|TUBA1A|7846|tubulin, alpha 1a	CR599962|TUBA1A|7846|tubulin, alpha 1a	CR600079|TUBA1A|7846|tubulin, alpha 1a	CR600126|TUBA1A|7846|tubulin, alpha 1a	CR600236|TUBA1A|7846|tubulin, alpha 1a	CR600237|TUBA1A|7846|tubulin, alpha 1a	CR601427|TUBA1A|7846|tubulin, alpha 1a	CR601535|TUBA1A|7846|tubulin, alpha 1a	CR601951|TUBA1A|7846|tubulin, alpha 1a	CR602360|TUBA1A|7846|tubulin, alpha 1a	CR602775|TUBA1A|7846|tubulin, alpha 1a	CR603584|TUBA1A|7846|tubulin, alpha 1a	CR603604|TUBA1A|7846|tubulin, alpha 1a	CR603752|TUBA1A|7846|tubulin, alpha 1a	CR603942|TUBA1A|7846|tubulin, alpha 1a	CR603969|TUBA1A|7846|tubulin, alpha 1a	CR605154|TUBA1A|7846|tubulin, alpha 1a	CR605304|TUBA1A|7846|tubulin, alpha 1a	CR606121|TUBA1A|7846|tubulin, alpha 1a	CR606970|TUBA1A|7846|tubulin, alpha 1a	CR607235|TUBA1A|7846|tubulin, alpha 1a	CR607284|TUBA1A|7846|tubulin, alpha 1a	CR607806|TUBA1A|7846|tubulin, alpha 1a	CR607938|TUBA1A|7846|tubulin, alpha 1a	CR607971|TUBA1A|7846|tubulin, alpha 1a	CR608399|TUBA1A|7846|tubulin, alpha 1a	CR608967|TUBA1A|7846|tubulin, alpha 1a	CR609323|TUBA1A|7846|tubulin, alpha 1a	CR609686|TUBA1A|7846|tubulin, alpha 1a	CR610674|TUBA1A|7846|tubulin, alpha 1a	CR610761|TUBA1A|7846|tubulin, alpha 1a	CR611047|TUBA1A|7846|tubulin, alpha 1a	CR611222|TUBA1A|7846|tubulin, alpha 1a	CR611610|TUBA1A|7846|tubulin, alpha 1a	CR611647|TUBA1A|7846|tubulin, alpha 1a	CR612520|TUBA1A|7846|tubulin, alpha 1a	CR613002|TUBA1A|7846|tubulin, alpha 1a	CR614113|TUBA1A|7846|tubulin, alpha 1a	CR614118|TUBA1A|7846|tubulin, alpha 1a	CR614378|TUBA1A|7846|tubulin, alpha 1a	CR614551|TUBA1A|7846|tubulin, alpha 1a	CR615075|TUBA1A|7846|tubulin, alpha 1a	CR615166|TUBA1A|7846|tubulin, alpha 1a	CR616032|TUBA1A|7846|tubulin, alpha 1a	CR616068|TUBA1A|7846|tubulin, alpha 1a	CR616371|TUBA1A|7846|tubulin, alpha 1a	CR616965|TUBA1A|7846|tubulin, alpha 1a	CR617030|TUBA1A|7846|tubulin, alpha 1a	CR617789|TUBA1A|7846|tubulin, alpha 1a	CR618788|TUBA1A|7846|tubulin, alpha 1a	CR619179|TUBA1A|7846|tubulin, alpha 1a	CR619445|TUBA1A|7846|tubulin, alpha 1a	CR619898|TUBA1A|7846|tubulin, alpha 1a	CR620189|TUBA1A|7846|tubulin, alpha 1a	CR620492|TUBA1A|7846|tubulin, alpha 1a	CR620793|TUBA1A|7846|tubulin, alpha 1a	CR621215|TUBA1A|7846|tubulin, alpha 1a	CR621574|TUBA1A|7846|tubulin, alpha 1a	CR621901|TUBA1A|7846|tubulin, alpha 1a	CR622543|TUBA1A|7846|tubulin, alpha 1a	CR623135|TUBA1A|7846|tubulin, alpha 1a	CR623412|TUBA1A|7846|tubulin, alpha 1a	CR623579|TUBA1A|7846|tubulin, alpha 1a	CR624173|TUBA1A|7846|tubulin, alpha 1a	CR624183|TUBA1A|7846|tubulin, alpha 1a	CR624685|TUBA1A|7846|tubulin, alpha 1a	CR624772|TUBA1A|7846|tubulin, alpha 1a	CR625764|TUBA1A|7846|tubulin, alpha 1a	CR626641|TUBA1A|7846|tubulin, alpha 1a	CR594477|TUBA1A|7846|tubulin, alpha 1a	AK057842|TUBA1A|7846|tubulin, alpha 1a	AK297775|TUBA1A|7846|tubulin, alpha 1a	BC057823|TUBA1A|7846|tubulin, alpha 1a	NM_006009|TUBA1A|7846|tubulin, alpha 1a	AK298838|TUBA1A|7846|tubulin, alpha 1a	CR612808|TUBA1A|7846|tubulin, alpha 1a	CR624125|TUBA1A|7846|tubulin, alpha 1a
hg18_v1_chr21_+_37713076_37713076	0.196095	SOX2.p2	D86550|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A	NM_130436|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A
hg18_v1_chr1_-_200380321_200380473	0.195729	SOX2.p2	AB118752|ARL8A|127829|ADP-ribosylation factor-like 8A	BC015408|ARL8A|127829|ADP-ribosylation factor-like 8A	AK127138|ARL8A|127829|ADP-ribosylation factor-like 8A	AK313122|ARL8A|127829|ADP-ribosylation factor-like 8A
hg18_v1_chr12_-_56159895_56159899	0.195683	SOX2.p2	AK304107|ARHGAP9|64333|Rho GTPase activating protein 9	AB051853|ARHGAP9|64333|Rho GTPase activating protein 9	NM_032496|ARHGAP9|64333|Rho GTPase activating protein 9
hg18_v1_chr6_-_18095672_18095806	0.195604	SOX2.p2	AJ291578|KIF13A|63971|kinesin family member 13A	AJ291579|KIF13A|63971|kinesin family member 13A	BC127115|KIF13A|63971|kinesin family member 13A	BC127116|KIF13A|63971|kinesin family member 13A	AY014403|KIF13A|63971|kinesin family member 13A	AY014404|KIF13A|63971|kinesin family member 13A	NM_001105566|KIF13A|63971|kinesin family member 13A	NM_001105567|KIF13A|63971|kinesin family member 13A	NM_001105568|KIF13A|63971|kinesin family member 13A	NM_022113|KIF13A|63971|kinesin family member 13A
hg18_v1_chr7_+_142885087_142885087	0.194633	SOX2.p2	BC101157|TAS2R41|259287|taste receptor, type 2, member 41	BC101158|TAS2R41|259287|taste receptor, type 2, member 41	NM_176883|TAS2R41|259287|taste receptor, type 2, member 41
hg18_v1_chr1_+_109221124_109221144	0.194566	SOX2.p2	AB445462|GPSM2|29899|G-protein signaling modulator 2	NM_013296|GPSM2|29899|G-protein signaling modulator 2	AK314249|GPSM2|29899|G-protein signaling modulator 2
hg18_v1_chr6_-_123999640_123999844	0.194243	SOX2.p2	NM_006073|TRDN|10345|triadin	U18985|TRDN|10345|triadin	BC139910|TRDN|10345|triadin	AK291867|TRDN|10345|triadin	BC012590|TRDN|10345|triadin	BC029393|TRDN|10345|triadin	BC057222|TRDN|10345|triadin	BC070290|TRDN|10345|triadin	AJ489257|TRDN|10345|triadin	AK307619|TRDN|10345|triadin
hg18_v1_chr9_-_90456824_90456894	0.193743	SOX2.p2	BC101432|LOC286238|286238|hypothetical protein LOC286238	BC101439|LOC286238|286238|hypothetical protein LOC286238	BC101440|LOC286238|286238|hypothetical protein LOC286238	BC101442|LOC286238|286238|hypothetical protein LOC286238	AK098532|LOC286238|286238|hypothetical protein LOC286238	NM_001100111|LOC286238|286238|hypothetical protein LOC286238
hg18_v1_chr1_+_89871212_89871230	0.193367	SOX2.p2	BC036122|LRRC8C|84230|leucine rich repeat containing 8 family, member C
hg18_v1_chr17_-_53847937_53848133	0.193269	SOX2.p2	AK296769|RNF43|54894|ring finger protein 43	AK000322|RNF43|54894|ring finger protein 43	BC109028|RNF43|54894|ring finger protein 43
hg18_v1_chr4_-_123761615_123761661	0.193202	SOX2.p2	DQ645417|IL21|59067|interleukin 21	BC069124|IL21|59067|interleukin 21	BC066258|IL21|59067|interleukin 21	BC066259|IL21|59067|interleukin 21	BC066260|IL21|59067|interleukin 21	BC066261|IL21|59067|interleukin 21	BC066262|IL21|59067|interleukin 21	NM_021803|IL21|59067|interleukin 21	AF254069|IL21|59067|interleukin 21
hg18_v1_chr15_+_66133625_66133708	0.19247	SOX2.p2	AF167160|PIAS1|8554|protein inhibitor of activated STAT, 1	NM_016166|PIAS1|8554|protein inhibitor of activated STAT, 1	BC118587|PIAS1|8554|protein inhibitor of activated STAT, 1	BC121797|PIAS1|8554|protein inhibitor of activated STAT, 1	AK314515|PIAS1|8554|protein inhibitor of activated STAT, 1	BC104646|PIAS1|8554|protein inhibitor of activated STAT, 1
hg18_v1_chr6_-_29752909_29752909	0.192166	SOX2.p2	BC157878|ZFP57|346171|zinc finger protein 57 homolog (mouse)	BC171888|ZFP57|346171|zinc finger protein 57 homolog (mouse)	NM_001109809|ZFP57|346171|zinc finger protein 57 homolog (mouse)
hg18_v1_chr5_-_88155360_88155499	0.19207	SOX2.p2	EU446634|MEF2C|4208|myocyte enhancer factor 2C	EU832832|MEF2C|4208|myocyte enhancer factor 2C	FM163484|MEF2C|4208|myocyte enhancer factor 2C	FM180475|MEF2C|4208|myocyte enhancer factor 2C	GQ129219|MEF2C|4208|myocyte enhancer factor 2C	GQ129221|MEF2C|4208|myocyte enhancer factor 2C	GQ129392|MEF2C|4208|myocyte enhancer factor 2C	GQ129393|MEF2C|4208|myocyte enhancer factor 2C	NM_001193348|MEF2C|4208|myocyte enhancer factor 2C	NM_001193349|MEF2C|4208|myocyte enhancer factor 2C
hg18_v1_chr2_+_170298700_170298767	0.191918	SOX2.p2	BC010437|KLHL23|151230|kelch-like 23 (Drosophila)
hg18_v1_chr1_-_200380477_200380489	0.191891	SOX2.p2	CR597275|ARL8A|127829|ADP-ribosylation factor-like 8A	NM_138795|ARL8A|127829|ADP-ribosylation factor-like 8A
hg18_v1_chr2_-_207738858_207738944	0.191348	SOX2.p2	AB015132|KLF7|8609|Kruppel-like factor 7 (ubiquitous)	NM_003709|KLF7|8609|Kruppel-like factor 7 (ubiquitous)	AK314439|KLF7|8609|Kruppel-like factor 7 (ubiquitous)
hg18_v1_chr11_+_8016755_8016755	0.191	SOX2.p2	NM_003320|TUB|7275|tubby homolog (mouse)	U82467|TUB|7275|tubby homolog (mouse)
hg18_v1_chr1_+_87567164_87567375	0.190194	SOX2.p2	BC017673|LMO4|8543|LIM domain only 4	BC003600|LMO4|8543|LIM domain only 4
hg18_v1_chr7_+_128795280_128795369	0.190141	SOX2.p2	AK025372|AHCYL2|23382|adenosylhomocysteinase-like 2
hg18_v1_chr19_+_10932713_10932718	0.190048	SOX2.p2	BC007302|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
hg18_v1_chr15_-_81667169_81667668	0.189877	SOX2.p2	BC015483|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	CR598906|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	CR611705|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	AB029156|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	AF110642|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	AF151900|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	AK001280|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	NM_016073|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3
hg18_v1_chr22_-_17799177_17799214	0.189533	SOX2.p2	BC039835|HIRA|7290|HIR histone cell cycle regulation defective homolog A (S. cerevisiae)
hg18_v1_chr7_+_113853790_113853942	0.189468	SOX2.p2	AF467253|FOXP2|93986|forkhead box P2	NM_001172767|FOXP2|93986|forkhead box P2	NM_148899|FOXP2|93986|forkhead box P2	AF467258|FOXP2|93986|forkhead box P2	AF467259|FOXP2|93986|forkhead box P2
hg18_v1_chr15_-_49830941_49831073	0.18896	SOX2.p2	NM_001143917|LYSMD2|256586|LysM, putative peptidoglycan-binding, domain containing 2	BC022075|LYSMD2|256586|LysM, putative peptidoglycan-binding, domain containing 2
hg18_v1_chr1_-_199259447_199259462	0.188738	SOX2.p2	AB007918|KIF21B|23046|kinesin family member 21B	NM_017596|KIF21B|23046|kinesin family member 21B
hg18_v1_chr3_+_23904086_23904139	0.188733	SOX2.p2	CR609756|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1 (UBC4/5 homolog, yeast)
hg18_v1_chr10_+_18280773_18280897	0.188325	SOX2.p2	NM_001145195|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12	NM_152725|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12	AK055061|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12	BC035118|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12	BC047635|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12	AK295294|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12	BC094700|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12
hg18_v1_chr6_+_144649142_144649204	0.1882	SOX2.p2	AK292506|UTRN|7402|utrophin
hg18_v1_chr20_+_41628150_41628150	0.188138	SOX2.p2	AF186470|SGK2|10110|serum/glucocorticoid regulated kinase 2	NM_016276|SGK2|10110|serum/glucocorticoid regulated kinase 2
hg18_v1_chrX_+_15435351_15435351	0.187811	SOX2.p2	NM_001721|BMX|660|BMX non-receptor tyrosine kinase
hg18_v1_chr2_+_157822355_157822723	0.187695	SOX2.p2	BC142676|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)	BC142703|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)	AY277591|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)	NM_014568|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)	AK292154|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)	BC144211|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)
hg18_v1_chr7_+_128136347_128136379	0.187453	SOX2.p2	AK093161|FAM71F1|84691|family with sequence similarity 71, member F1	AK302221|FAM71F1|84691|family with sequence similarity 71, member F1	BC040906|FAM71F1|84691|family with sequence similarity 71, member F1	AK310426|FAM71F1|84691|family with sequence similarity 71, member F1
hg18_v1_chr19_-_1062972_1063003	0.187449	SOX2.p2	BC106021|SBNO2|22904|strawberry notch homolog 2 (Drosophila)
hg18_v1_chr17_-_36928604_36928795	0.187438	SOX2.p2	BT007261|KRT15|3866|keratin 15	DQ892990|KRT15|3866|keratin 15	DQ896238|KRT15|3866|keratin 15	BC110649|KRT15|3866|keratin 15	BC002641|KRT15|3866|keratin 15	X07696|KRT15|3866|keratin 15	AK304059|KRT15|3866|keratin 15	NM_002275|KRT15|3866|keratin 15
hg18_v1_chr11_+_125258718_125258718	0.18725	SOX2.p2	AK057477|HYLS1|219844|hydrolethalus syndrome 1	NM_145014|HYLS1|219844|hydrolethalus syndrome 1
hg18_v1_chr12_-_47790604_47790780	0.18687	SOX2.p2	DQ892407|LMBR1L|55716|limb region 1 homolog (mouse)-like	DQ895619|LMBR1L|55716|limb region 1 homolog (mouse)-like	BC015015|LMBR1L|55716|limb region 1 homolog (mouse)-like	BC031550|LMBR1L|55716|limb region 1 homolog (mouse)-like	AB033000|LMBR1L|55716|limb region 1 homolog (mouse)-like	AK001356|LMBR1L|55716|limb region 1 homolog (mouse)-like	CR625783|LMBR1L|55716|limb region 1 homolog (mouse)-like
hg18_v1_chrX_+_21868635_21868859	0.186448	SOX2.p2	CR591649|SMS|6611|spermine synthase	NM_004595|SMS|6611|spermine synthase	CR591187|SMS|6611|spermine synthase	CR617235|SMS|6611|spermine synthase	CR617125|SMS|6611|spermine synthase	CR619263|SMS|6611|spermine synthase	CR624838|SMS|6611|spermine synthase	CR608120|SMS|6611|spermine synthase	AD001528|SMS|6611|spermine synthase	AK293455|SMS|6611|spermine synthase	AK313834|SMS|6611|spermine synthase	CR594549|SMS|6611|spermine synthase	BC009898|SMS|6611|spermine synthase	CR598032|SMS|6611|spermine synthase	CR620002|SMS|6611|spermine synthase	CR607592|SMS|6611|spermine synthase	BC085621|SMS|6611|spermine synthase	CR591729|SMS|6611|spermine synthase	EU176347|SMS|6611|spermine synthase
hg18_v1_chr6_+_116939500_116939528	0.186324	SOX2.p2	BC032556|FAM26E|254228|family with sequence similarity 26, member E	NM_153711|FAM26E|254228|family with sequence similarity 26, member E	AK094140|FAM26E|254228|family with sequence similarity 26, member E	AK315572|FAM26E|254228|family with sequence similarity 26, member E
hg18_v1_chr3_+_19164973_19165044	0.185985	SOX2.p2	AK295633|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8	AY053503|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8	NM_144633|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8	AB209053|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8	AK309034|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8
hg18_v1_chr1_-_191422346_191422365	0.18598	SOX2.p2	AF288390|B3GALT2|8707|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2	BC022507|B3GALT2|8707|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2	NM_003783|B3GALT2|8707|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2
hg18_v1_chrX_-_24600661_24600899	0.185954	SOX2.p2	BC045634|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	AK296333|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	AK226121|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	NM_001163264|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta
hg18_v1_chr17_+_51585834_51585837	0.185603	SOX2.p2	NM_153228|ANKFN1|162282|ankyrin-repeat and fibronectin type III domain containing 1	AK095654|ANKFN1|162282|ankyrin-repeat and fibronectin type III domain containing 1
hg18_v1_chr6_+_57062848_57062883	0.184956	SOX2.p2	BC021712|ZNF451|26036|zinc finger protein 451
hg18_v1_chr12_-_101398429_101398436	0.184912	SOX2.p2	BC152321|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	M27544|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg18_v1_chr21_-_32026276_32026338	0.18424	SOX2.p2	BC014921|SCAF4|57466|SR-related CTD-associated factor 4	NM_001145444|SCAF4|57466|SR-related CTD-associated factor 4	NM_001145445|SCAF4|57466|SR-related CTD-associated factor 4	NM_020706|SCAF4|57466|SR-related CTD-associated factor 4
hg18_v1_chr19_-_53081326_53081372	0.183789	SOX2.p2	DQ891165|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1	DQ894346|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1	U08024|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1	L20000|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1	X70222|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1	X84816|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1
hg18_v1_chr1_-_206125877_206126015	0.183665	SOX2.p2	
hg18_v1_chr19_+_47498089_47498123	0.183573	SOX2.p2	BC063021|PRR19|284338|proline rich 19	AK291528|PRR19|284338|proline rich 19	NM_199285|PRR19|284338|proline rich 19
hg18_v1_chr5_+_61637701_61637759	0.182984	SOX2.p2	NM_001098511|KIF2A|3796|kinesin heavy chain member 2A	NM_004520|KIF2A|3796|kinesin heavy chain member 2A
hg18_v1_chr12_+_52665196_52665310	0.182969	SOX2.p2	AK313759|HOXC10|3226|homeobox C10	NM_017409|HOXC10|3226|homeobox C10	BC001293|HOXC10|3226|homeobox C10	CR622939|HOXC10|3226|homeobox C10	AF255675|HOXC10|3226|homeobox C10	BT009921|HOXC10|3226|homeobox C10
hg18_v1_chr12_-_47869134_47869153	0.182907	SOX2.p2	CR593163|TUBA1A|7846|tubulin, alpha 1a	CR592605|TUBA1A|7846|tubulin, alpha 1a
hg18_v1_chr22_-_17892859_17892893	0.18252	SOX2.p2	AK092561|CLDN5|7122|claudin 5	NM_001130861|CLDN5|7122|claudin 5	NM_003277|CLDN5|7122|claudin 5	CR626038|CLDN5|7122|claudin 5
hg18_v1_chr6_+_108987703_108987742	0.182198	SOX2.p2	NM_201559|FOXO3|2309|forkhead box O3	BC020227|FOXO3|2309|forkhead box O3	BC021224|FOXO3|2309|forkhead box O3	CR623727|FOXO3|2309|forkhead box O3
hg18_v1_chr17_-_60439764_60439772	0.182164	SOX2.p2	AK026902|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13
hg18_v1_chr3_-_161766055_161766110	0.182097	SOX2.p2	BC034493|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)	NM_002268|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)
hg18_v1_chr14_+_19681734_19681734	0.181943	SOX2.p2	NM_001004724|OR4N5|390437|olfactory receptor, family 4, subfamily N, member 5
hg18_v1_chr12_-_38300109_38300109	0.181871	SOX2.p2	AK314254|ABCD2|225|ATP-binding cassette, sub-family D (ALD), member 2	NM_005164|ABCD2|225|ATP-binding cassette, sub-family D (ALD), member 2
hg18_v1_chr3_+_69895651_69895651	0.181703	SOX2.p2	AB006988|MITF|4286|microphthalmia-associated transcription factor	NM_006722|MITF|4286|microphthalmia-associated transcription factor
hg18_v1_chr1_-_200182338_200182340	0.181598	SOX2.p2	NM_012134|LMOD1|25802|leiomodin 1 (smooth muscle)
hg18_v1_chr6_-_33028790_33028876	0.181322	SOX2.p2	CR450324|HLA-DMA|3108|major histocompatibility complex, class II, DM alpha	DQ892839|HLA-DMA|3108|major histocompatibility complex, class II, DM alpha	DQ896086|HLA-DMA|3108|major histocompatibility complex, class II, DM alpha	BC026279|HLA-DMA|3108|major histocompatibility complex, class II, DM alpha	AK291858|HLA-DMA|3108|major histocompatibility complex, class II, DM alpha	X62744|HLA-DMA|3108|major histocompatibility complex, class II, DM alpha	BC011447|HLA-DMA|3108|major histocompatibility complex, class II, DM alpha	NM_006120|HLA-DMA|3108|major histocompatibility complex, class II, DM alpha
hg18_v1_chr5_+_69356827_69357015	0.181236	SOX2.p2	NM_021967|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	NM_022968|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC021174|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	NM_001178087|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	NM_022978|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	AF073519|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	AF073518|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC035932|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	CR626737|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC093880|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC171749|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC101970|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC103687|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC104738|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC143260|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC093882|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC143255|SERF1B|728492|small EDRK-rich factor 1B (centromeric)
hg18_v1_chr7_-_86433139_86433226	0.18075	SOX2.p2	AK296250|KIAA1324L|222223|KIAA1324-like	NM_152748|KIAA1324L|222223|KIAA1324-like
hg18_v1_chr7_+_26644014_26644014	0.180595	SOX2.p2	AK093321|C7orf71|285941|chromosome 7 open reading frame 71	NM_001145531|C7orf71|285941|chromosome 7 open reading frame 71
hg18_v1_chr6_+_41622267_41622363	0.180385	SOX2.p2	BC052803|FOXP4|116113|forkhead box P4
hg18_v1_chr5_-_95044415_95044469	0.180379	SOX2.p2	AY027526|SPATA9|83890|spermatogenesis associated 9	AK292338|SPATA9|83890|spermatogenesis associated 9	AK310260|SPATA9|83890|spermatogenesis associated 9	BC047333|SPATA9|83890|spermatogenesis associated 9	AK093225|SPATA9|83890|spermatogenesis associated 9	BC032832|SPATA9|83890|spermatogenesis associated 9	NM_031952|SPATA9|83890|spermatogenesis associated 9
hg18_v1_chr5_+_71538456_71538583	0.179992	SOX2.p2	AK125194|MAP1B|4131|microtubule-associated protein 1B
hg18_v1_chr21_+_40161216_40161278	0.179807	SOX2.p2	NM_006198|PCP4|5121|Purkinje cell protein 4	U52969|PCP4|5121|Purkinje cell protein 4	AK289964|PCP4|5121|Purkinje cell protein 4	BC013791|PCP4|5121|Purkinje cell protein 4	X93349|PCP4|5121|Purkinje cell protein 4	AF416716|PCP4|5121|Purkinje cell protein 4	AM183336|PCP4|5121|Purkinje cell protein 4
hg18_v1_chr6_+_88024152_88024156	0.179203	SOX2.p2	BC016386|ZNF292|23036|zinc finger protein 292
hg18_v1_chr12_-_68379331_68379462	0.178989	SOX2.p2	BC151138|BEST3|144453|bestrophin 3	CR612373|BEST3|144453|bestrophin 3	BC006440|BEST3|144453|bestrophin 3	CR614874|BEST3|144453|bestrophin 3	AF440758|BEST3|144453|bestrophin 3	AK096459|BEST3|144453|bestrophin 3	NM_032735|BEST3|144453|bestrophin 3
hg18_v1_chr19_-_57924946_57924946	0.178835	SOX2.p2	AK097434|ZNF611|81856|zinc finger protein 611	NM_030972|ZNF611|81856|zinc finger protein 611
hg18_v1_chr4_+_57468792_57468833	0.178814	SOX2.p2	NM_005612|REST|5978|RE1-silencing transcription factor
hg18_v1_chr1_+_24158887_24158897	0.178756	SOX2.p2	NM_017761|PNRC2|55629|proline-rich nuclear receptor coactivator 2
hg18_v1_chr12_-_88573949_88574015	0.178531	SOX2.p2	J04027|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1	M95541|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1	NM_001001323|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1	NM_001682|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1	BC015346|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1
hg18_v1_chr15_+_72861470_72861488	0.178323	SOX2.p2	BC106073|CSK|1445|c-src tyrosine kinase	NM_001127190|CSK|1445|c-src tyrosine kinase	NM_004383|CSK|1445|c-src tyrosine kinase	AK290531|CSK|1445|c-src tyrosine kinase	CR620625|CSK|1445|c-src tyrosine kinase
hg18_v1_chr2_+_88148413_88148516	0.178065	SOX2.p2	BC126191|SMYD1|150572|SET and MYND domain containing 1	NM_198274|SMYD1|150572|SET and MYND domain containing 1	AK091724|SMYD1|150572|SET and MYND domain containing 1	BC017915|SMYD1|150572|SET and MYND domain containing 1	BX647878|SMYD1|150572|SET and MYND domain containing 1	AL832035|SMYD1|150572|SET and MYND domain containing 1	EU831908|SMYD1|150572|SET and MYND domain containing 1	EU832002|SMYD1|150572|SET and MYND domain containing 1	AY518933|SMYD1|150572|SET and MYND domain containing 1
hg18_v1_chr19_-_2901583_2901642	0.177288	SOX2.p2	
hg18_v1_chr10_+_18589589_18589703	0.177253	SOX2.p2	NM_000724|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AB208917|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	U95019|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit
hg18_v1_chr15_-_75259714_75259853	0.17691	SOX2.p2	AK091802|PEAK1|79834|NKF3 kinase family member
hg18_v1_chrX_+_30143595_30143636	0.176896	SOX2.p2	CR618499|MAGEB2|4113|melanoma antigen family B, 2	NM_002364|MAGEB2|4113|melanoma antigen family B, 2	AF015766|MAGEB2|4113|melanoma antigen family B, 2	AK313347|MAGEB2|4113|melanoma antigen family B, 2	BC026071|MAGEB2|4113|melanoma antigen family B, 2	AK223081|MAGEB2|4113|melanoma antigen family B, 2	CR618278|MAGEB2|4113|melanoma antigen family B, 2	CR621494|MAGEB2|4113|melanoma antigen family B, 2	CR590008|MAGEB2|4113|melanoma antigen family B, 2	CR593708|MAGEB2|4113|melanoma antigen family B, 2
hg18_v1_chr12_-_101398288_101398403	0.176813	SOX2.p2	BC148266|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	CR541861|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	X56773|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	X56774|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	M29644|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	X00173|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg18_v1_chr6_-_29120930_29120995	0.176464	SOX2.p2	BC103870|OR2W1|26692|olfactory receptor, family 2, subfamily W, member 1	BC103871|OR2W1|26692|olfactory receptor, family 2, subfamily W, member 1	BC103872|OR2W1|26692|olfactory receptor, family 2, subfamily W, member 1	NM_030903|OR2W1|26692|olfactory receptor, family 2, subfamily W, member 1
hg18_v1_chr1_-_43628060_43628071	0.176424	SOX2.p2	NM_052877|MED8|112950|mediator complex subunit 8	NM_201542|MED8|112950|mediator complex subunit 8
hg18_v1_chr4_+_39376058_39376341	0.176001	SOX2.p2	NM_001111112|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	NM_001111113|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	NM_005339|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AK295846|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AK315524|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AK093533|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AK291454|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AK307130|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	CR606205|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	BC022804|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	BC050600|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AB022435|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AB022436|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	U58522|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	EU446896|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)
hg18_v1_chr4_-_17415918_17416015	0.1759	SOX2.p2	BC050697|DCAF16|54876|DDB1 and CUL4 associated factor 16
hg18_v1_chr14_-_106289751_106290256	0.17579	SOX2.p2	Y14735|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	BC073771|IGHA1|3493|immunoglobulin heavy constant alpha 1	BX640620|IGHM|3507|immunoglobulin heavy constant mu
hg18_v1_chr12_-_47250069_47250095	0.175346	SOX2.p2	CR541987|LALBA|3906|lactalbumin, alpha-	CR542017|LALBA|3906|lactalbumin, alpha-	J00270|LALBA|3906|lactalbumin, alpha-	BC112316|LALBA|3906|lactalbumin, alpha-	BC112318|LALBA|3906|lactalbumin, alpha-	BC069103|LALBA|3906|lactalbumin, alpha-	NM_002289|LALBA|3906|lactalbumin, alpha-
hg18_v1_chr5_-_171643399_171643442	0.175034	SOX2.p2	NM_152277|UBTD2|92181|ubiquitin domain containing 2
hg18_v1_chr1_+_6607511_6607511	0.174952	SOX2.p2	BC092427|THAP3|90326|THAP domain containing, apoptosis associated protein 3	NM_001195753|THAP3|90326|THAP domain containing, apoptosis associated protein 3
hg18_v1_chr1_-_153444304_153444342	0.174479	SOX2.p2	CR590329|THBS3|7059|thrombospondin 3	AK223278|THBS3|7059|thrombospondin 3	L38969|THBS3|7059|thrombospondin 3	AK298803|THBS3|7059|thrombospondin 3	BC113846|THBS3|7059|thrombospondin 3	BC113847|THBS3|7059|thrombospondin 3	NM_007112|THBS3|7059|thrombospondin 3	AK298592|THBS3|7059|thrombospondin 3	AK314337|THBS3|7059|thrombospondin 3
hg18_v1_chr2_-_85494664_85494690	0.173329	SOX2.p2	CR607458|CAPG|822|capping protein (actin filament), gelsolin-like	AK309290|CAPG|822|capping protein (actin filament), gelsolin-like
hg18_v1_chr1_-_40140126_40140273	0.173155	SOX2.p2	CR614411|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)	AK296078|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)	BC030694|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)	BC011864|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)	NM_001033081|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)	NM_001033082|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)	NM_005376|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)
hg18_v1_chr3_+_125296217_125296374	0.17298	SOX2.p2	AK314126|KALRN|8997|kalirin, RhoGEF kinase	AK311154|KALRN|8997|kalirin, RhoGEF kinase	NM_001024660|KALRN|8997|kalirin, RhoGEF kinase	NM_003947|KALRN|8997|kalirin, RhoGEF kinase	AK311581|KALRN|8997|kalirin, RhoGEF kinase	U94190|KALRN|8997|kalirin, RhoGEF kinase	BC037924|KALRN|8997|kalirin, RhoGEF kinase
hg18_v1_chr11_+_6898780_6898808	0.172587	SOX2.p2	BC137208|OR2D3|120775|olfactory receptor, family 2, subfamily D, member 3	BC137209|OR2D3|120775|olfactory receptor, family 2, subfamily D, member 3	NM_001004684|OR2D3|120775|olfactory receptor, family 2, subfamily D, member 3
hg18_v1_chr1_+_159395853_159395911	0.172573	SOX2.p2	NM_001014443|USP21|27005|ubiquitin specific peptidase 21	NM_012475|USP21|27005|ubiquitin specific peptidase 21	AB208899|USP21|27005|ubiquitin specific peptidase 21
hg18_v1_chr21_+_36364091_36364156	0.172493	SOX2.p2	AB124848|CBR1|873|carbonyl reductase 1	CR626808|CBR1|873|carbonyl reductase 1	NM_001757|CBR1|873|carbonyl reductase 1	CR618962|CBR1|873|carbonyl reductase 1
hg18_v1_chr14_-_57688669_57688685	0.172493	SOX2.p2	AK292513|C14orf37|145407|chromosome 14 open reading frame 37
hg18_v1_chr1_+_26609819_26609857	0.172419	SOX2.p2	BC028566|LIN28A|79727|lin-28 homolog A (C. elegans)	NM_024674|LIN28A|79727|lin-28 homolog A (C. elegans)
hg18_v1_chr22_+_19601721_19601722	0.171975	SOX2.p2	BC026248|CRKL|1399|v-crk sarcoma virus CT10 oncogene homolog (avian)-like
hg18_v1_chr19_+_44595589_44595589	0.171061	SOX2.p2	AK024429|PLEKHG2|64857|pleckstrin homology domain containing, family G (with RhoGef domain) member 2	NM_022835|PLEKHG2|64857|pleckstrin homology domain containing, family G (with RhoGef domain) member 2
hg18_v1_chr7_-_16471817_16471998	0.171024	SOX2.p2	AB059270|SOSTDC1|25928|sclerostin domain containing 1	CR614752|SOSTDC1|25928|sclerostin domain containing 1	AK315682|SOSTDC1|25928|sclerostin domain containing 1	BC008484|SOSTDC1|25928|sclerostin domain containing 1	CR606874|SOSTDC1|25928|sclerostin domain containing 1	AF361494|SOSTDC1|25928|sclerostin domain containing 1	NM_015464|SOSTDC1|25928|sclerostin domain containing 1
hg18_v1_chr19_+_702108_702151	0.17102	SOX2.p2	BC052236|C19orf21|126353|chromosome 19 open reading frame 21	BX648389|C19orf21|126353|chromosome 19 open reading frame 21	BC042125|C19orf21|126353|chromosome 19 open reading frame 21	NM_173481|C19orf21|126353|chromosome 19 open reading frame 21
hg18_v1_chrX_+_107569671_107569809	0.171008	SOX2.p2	BC151846|COL4A5|1287|collagen, type IV, alpha 5	M90464|COL4A5|1287|collagen, type IV, alpha 5	NM_000495|COL4A5|1287|collagen, type IV, alpha 5	NM_033380|COL4A5|1287|collagen, type IV, alpha 5
hg18_v1_chr5_+_67558217_67558217	0.170765	SOX2.p2	M61906|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	NM_181523|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
hg18_v1_chr9_-_122728993_122728993	0.170754	SOX2.p2	AK090468|TRAF1|7185|TNF receptor-associated factor 1	NM_005658|TRAF1|7185|TNF receptor-associated factor 1
hg18_v1_chr1_-_114855200_114855266	0.170391	SOX2.p2	AB029036|TRIM33|51592|tripartite motif containing 33
hg18_v1_chr1_-_199742871_199743009	0.170372	SOX2.p2	CR614180|CSRP1|1465|cysteine and glycine-rich protein 1	CR625797|CSRP1|1465|cysteine and glycine-rich protein 1	AK057876|CSRP1|1465|cysteine and glycine-rich protein 1	AK122812|CSRP1|1465|cysteine and glycine-rich protein 1	AK302237|CSRP1|1465|cysteine and glycine-rich protein 1	AK304415|CSRP1|1465|cysteine and glycine-rich protein 1	NM_001193570|CSRP1|1465|cysteine and glycine-rich protein 1	NM_004078|CSRP1|1465|cysteine and glycine-rich protein 1
hg18_v1_chr19_+_13111072_13111163	0.170352	SOX2.p2	AK123056|NACC1|112939|nucleus accumbens associated 1, BEN and BTB (POZ) domain containing
hg18_v1_chr8_-_125648576_125648599	0.170271	SOX2.p2	AK126989|MTSS1|9788|metastasis suppressor 1
hg18_v1_chr12_-_47735373_47735373	0.170183	SOX2.p2	AF010403|MLL2|8085|myeloid/lymphoid or mixed-lineage leukemia 2	NM_003482|MLL2|8085|myeloid/lymphoid or mixed-lineage leukemia 2
hg18_v1_chr6_-_2696152_2696198	0.170159	SOX2.p2	BX647582|MYLK4|340156|myosin light chain kinase family, member 4	NM_001012418|MYLK4|340156|myosin light chain kinase family, member 4	AK096893|MYLK4|340156|myosin light chain kinase family, member 4
hg18_v1_chr6_+_47774247_47774260	0.169738	SOX2.p2	AK095395|GPR115|221393|G protein-coupled receptor 115	NM_153838|GPR115|221393|G protein-coupled receptor 115	DQ315370|GPR115|221393|G protein-coupled receptor 115
hg18_v1_chr1_-_20986385_20986428	0.169732	SOX2.p2	AK304065|HP1BP3|50809|heterochromatin protein 1, binding protein 3
hg18_v1_chr1_-_20986345_20986383	0.169695	SOX2.p2	BC046170|HP1BP3|50809|heterochromatin protein 1, binding protein 3	CR599334|HP1BP3|50809|heterochromatin protein 1, binding protein 3
hg18_v1_chr18_+_3437607_3437627	0.169347	SOX2.p2	NM_173207|TGIF1|7050|TGFB-induced factor homeobox 1	AK291112|TGIF1|7050|TGFB-induced factor homeobox 1
hg18_v1_chr2_+_148319033_148319191	0.169337	SOX2.p2	D31770|ACVR2A|92|activin A receptor, type IIA	BC069707|ACVR2A|92|activin A receptor, type IIA	NM_001616|ACVR2A|92|activin A receptor, type IIA	X62381|ACVR2A|92|activin A receptor, type IIA	BC067416|ACVR2A|92|activin A receptor, type IIA	BC067417|ACVR2A|92|activin A receptor, type IIA	BC067418|ACVR2A|92|activin A receptor, type IIA	X63128|ACVR2A|92|activin A receptor, type IIA
hg18_v1_chr19_-_50963942_50963968	0.169209	SOX2.p2	
hg18_v1_chr2_+_68445936_68445987	0.169078	SOX2.p2	DQ893586|PLEK|5341|pleckstrin	DQ894896|PLEK|5341|pleckstrin	CR542056|PLEK|5341|pleckstrin	CR542079|PLEK|5341|pleckstrin
hg18_v1_chr11_-_116605761_116605769	0.168542	SOX2.p2	BT006870|PCSK7|9159|proprotein convertase subtilisin/kexin type 7	DQ890632|PCSK7|9159|proprotein convertase subtilisin/kexin type 7	DQ893803|PCSK7|9159|proprotein convertase subtilisin/kexin type 7
hg18_v1_chr1_-_17638797_17638825	0.168529	SOX2.p2	NM_018715|RCC2|55920|regulator of chromosome condensation 2
hg18_v1_chr19_+_10932583_10932709	0.168448	SOX2.p2	NM_001128844|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	NM_003072|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	AK290033|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	BC150298|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	BC139917|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	BC139924|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
hg18_v1_chr16_+_23673448_23673592	0.168319	SOX2.p2	AF146019|CHP2|63928|calcineurin B homologous protein 2	NM_022097|CHP2|63928|calcineurin B homologous protein 2	AK313062|CHP2|63928|calcineurin B homologous protein 2
hg18_v1_chr9_+_132700567_132700651	0.168294	SOX2.p2	M14754|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase	NM_005157|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase
hg18_v1_chr7_+_128795178_128795266	0.168127	SOX2.p2	NM_001130723|AHCYL2|23382|adenosylhomocysteinase-like 2
hg18_v1_chr1_-_31311140_31311218	0.167891	SOX2.p2	NM_001020658|PUM1|9698|pumilio homolog 1 (Drosophila)	NM_014676|PUM1|9698|pumilio homolog 1 (Drosophila)	AK294477|PUM1|9698|pumilio homolog 1 (Drosophila)
hg18_v1_chr1_-_102234959_102235192	0.167888	SOX2.p2	EU176509|OLFM3|118427|olfactomedin 3	AF397394|OLFM3|118427|olfactomedin 3	AF397395|OLFM3|118427|olfactomedin 3	AF397396|OLFM3|118427|olfactomedin 3	AF397397|OLFM3|118427|olfactomedin 3	BC022531|OLFM3|118427|olfactomedin 3	AK095724|OLFM3|118427|olfactomedin 3
hg18_v1_chr6_+_112481970_112482251	0.167789	SOX2.p2	BC012028|WISP3|8838|WNT1 inducible signaling pathway protein 3	NM_003880|WISP3|8838|WNT1 inducible signaling pathway protein 3	BC035250|WISP3|8838|WNT1 inducible signaling pathway protein 3	NM_198239|WISP3|8838|WNT1 inducible signaling pathway protein 3	BC105940|WISP3|8838|WNT1 inducible signaling pathway protein 3	BC105941|WISP3|8838|WNT1 inducible signaling pathway protein 3	AY358349|WISP3|8838|WNT1 inducible signaling pathway protein 3	AF100781|WISP3|8838|WNT1 inducible signaling pathway protein 3	AY358350|WISP3|8838|WNT1 inducible signaling pathway protein 3	AB075040|WISP3|8838|WNT1 inducible signaling pathway protein 3
hg18_v1_chr17_-_36570508_36570511	0.167155	SOX2.p2	AJ406936|KRTAP4-4|84616|keratin associated protein 4-4	NM_032524|KRTAP4-4|84616|keratin associated protein 4-4	AJ296168|KRTAP4-4|84616|keratin associated protein 4-4
hg18_v1_chr1_-_31311349_31311391	0.167026	SOX2.p2	BX647437|PUM1|9698|pumilio homolog 1 (Drosophila)
hg18_v1_chr11_-_66201794_66201881	0.167	SOX2.p2	AK095158|RBM4B|83759|RNA binding motif protein 4B	CR614869|RBM4B|83759|RNA binding motif protein 4B	BC004951|RBM4B|83759|RNA binding motif protein 4B	NM_031492|RBM4B|83759|RNA binding motif protein 4B
hg18_v1_chr7_+_96583840_96583840	0.166953	SOX2.p2	BC028409|ACN9|57001|ACN9 homolog (S. cerevisiae)	NM_020186|ACN9|57001|ACN9 homolog (S. cerevisiae)
hg18_v1_chr19_-_53941835_53941979	0.166717	SOX2.p2	AB195682|IZUMO1|284359|izumo sperm-egg fusion 1	BC034769|IZUMO1|284359|izumo sperm-egg fusion 1	NM_182575|IZUMO1|284359|izumo sperm-egg fusion 1	AK301750|IZUMO1|284359|izumo sperm-egg fusion 1
hg18_v1_chr9_+_124835608_124835769	0.166496	SOX2.p2	AK294531|RABGAP1|23637|RAB GTPase activating protein 1	AK299686|GPR21|2844|G protein-coupled receptor 21	AK313539|GPR21|2844|G protein-coupled receptor 21
hg18_v1_chr17_-_10393664_10393741	0.166121	SOX2.p2	NM_001100112|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult	BC093082|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult	AK299440|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult	AK300702|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult	AK308102|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult	BX510904|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult	NM_017534|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult
hg18_v1_chrX_+_123062143_123062279	0.166014	SOX2.p2	AK026678|STAG2|10735|stromal antigen 2
hg18_v1_chr1_-_149955415_149955505	0.165533	SOX2.p2	AB209264|CELF3|11189|CUGBP, Elav-like family member 3	NM_001172648|CELF3|11189|CUGBP, Elav-like family member 3	NM_001172649|CELF3|11189|CUGBP, Elav-like family member 3
hg18_v1_chr4_-_155632317_155632397	0.165408	SOX2.p2	AK127704|DCHS2|54798|dachsous 2 (Drosophila)	NM_001142552|DCHS2|54798|dachsous 2 (Drosophila)	NM_001142553|DCHS2|54798|dachsous 2 (Drosophila)
hg18_v1_chr1_-_44255583_44255598	0.165348	SOX2.p2	NM_006934|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9	NM_201649|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9	S70609|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9	S70612|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9	AK315233|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9
hg18_v1_chr8_-_125785611_125785615	0.165185	SOX2.p2	U50573|MTSS1|9788|metastasis suppressor 1
hg18_v1_chr1_+_36160375_36160517	0.164409	SOX2.p2	AK000326|EIF2C1|26523|eukaryotic translation initiation factor 2C, 1
hg18_v1_chr15_+_81907176_81907289	0.164365	SOX2.p2	BC035598|SH3GL3|6457|SH3-domain GRB2-like 3	AF036269|SH3GL3|6457|SH3-domain GRB2-like 3	AF036270|SH3GL3|6457|SH3-domain GRB2-like 3	AF036271|SH3GL3|6457|SH3-domain GRB2-like 3	AF036272|SH3GL3|6457|SH3-domain GRB2-like 3	X99664|SH3GL3|6457|SH3-domain GRB2-like 3
hg18_v1_chr5_+_179092405_179092511	0.164269	SOX2.p2	D83785|MAML1|9794|mastermind-like 1 (Drosophila)	NM_014757|MAML1|9794|mastermind-like 1 (Drosophila)	AB209135|MAML1|9794|mastermind-like 1 (Drosophila)	BC047937|MAML1|9794|mastermind-like 1 (Drosophila)
hg18_v1_chr7_+_2638156_2638303	0.163954	SOX2.p2	BC131824|TTYH3|80727|tweety homolog 3 (Drosophila)	AB162931|TTYH3|80727|tweety homolog 3 (Drosophila)
hg18_v1_chr7_-_107230867_107230913	0.163932	SOX2.p2	L02785|SLC26A3|1811|solute carrier family 26, member 3	BC025671|SLC26A3|1811|solute carrier family 26, member 3	BX640837|SLC26A3|1811|solute carrier family 26, member 3	NM_000111|SLC26A3|1811|solute carrier family 26, member 3
hg18_v1_chr1_-_156056456_156056563	0.163917	SOX2.p2	AF329488|FCRL1|115350|Fc receptor-like 1	BC021274|FCRL1|115350|Fc receptor-like 1	AK315748|FCRL1|115350|Fc receptor-like 1	AK096690|FCRL1|115350|Fc receptor-like 1	BC033690|FCRL1|115350|Fc receptor-like 1	AF459634|FCRL1|115350|Fc receptor-like 1	AY043464|FCRL1|115350|Fc receptor-like 1	NM_001159397|FCRL1|115350|Fc receptor-like 1	NM_001159398|FCRL1|115350|Fc receptor-like 1	NM_052938|FCRL1|115350|Fc receptor-like 1
hg18_v1_chr8_+_42315132_42315299	0.163792	SOX2.p2	AK223537|POLB|5423|polymerase (DNA directed), beta	BC100288|POLB|5423|polymerase (DNA directed), beta	AK294025|POLB|5423|polymerase (DNA directed), beta	AK314976|POLB|5423|polymerase (DNA directed), beta	CR624336|POLB|5423|polymerase (DNA directed), beta	CR623008|POLB|5423|polymerase (DNA directed), beta	D29013|POLB|5423|polymerase (DNA directed), beta	M13140|POLB|5423|polymerase (DNA directed), beta	NM_002690|POLB|5423|polymerase (DNA directed), beta	BC106909|POLB|5423|polymerase (DNA directed), beta	CR536503|POLB|5423|polymerase (DNA directed), beta	CR541802|POLB|5423|polymerase (DNA directed), beta	L11607|POLB|5423|polymerase (DNA directed), beta
hg18_v1_chr17_-_36577949_36577949	0.16355	SOX2.p2	NM_033187|KRTAP4-3|85290|keratin associated protein 4-3
hg18_v1_chr21_-_44926485_44926505	0.163213	SOX2.p2	AB076363|KRTAP12-1|353332|keratin associated protein 12-1	BC127648|KRTAP12-1|353332|keratin associated protein 12-1	BC119713|KRTAP12-1|353332|keratin associated protein 12-1	BC120942|KRTAP12-1|353332|keratin associated protein 12-1	AJ566388|KRTAP12-1|353332|keratin associated protein 12-1	NM_181686|KRTAP12-1|353332|keratin associated protein 12-1
hg18_v1_chr16_+_2503676_2503894	0.163168	SOX2.p2	NM_001198569|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	M62762|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	NM_001694|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c
hg18_v1_chr6_+_84626146_84626220	0.163122	SOX2.p2	AM393033|CYB5R4|51167|cytochrome b5 reductase 4
hg18_v1_chr12_+_32151351_32151530	0.163066	SOX2.p2	AK313430|BICD1|636|bicaudal D homolog 1 (Drosophila)	AK290188|BICD1|636|bicaudal D homolog 1 (Drosophila)	NM_001003398|BICD1|636|bicaudal D homolog 1 (Drosophila)	NM_001714|BICD1|636|bicaudal D homolog 1 (Drosophila)	U90028|BICD1|636|bicaudal D homolog 1 (Drosophila)	BC136372|BICD1|636|bicaudal D homolog 1 (Drosophila)
hg18_v1_chr2_-_128285214_128285238	0.162812	SOX2.p2	BC005401|WDR33|55339|WD repeat domain 33	NM_001006622|WDR33|55339|WD repeat domain 33	NM_001006623|WDR33|55339|WD repeat domain 33	NM_018383|WDR33|55339|WD repeat domain 33
hg18_v1_chr4_-_54152385_54152416	0.162486	SOX2.p2	BC022983|LNX1|84708|ligand of numb-protein X 1
hg18_v1_chr6_-_89984214_89984214	0.16244	SOX2.p2	AK313609|GABRR1|2569|gamma-aminobutyric acid (GABA) receptor, rho 1	NM_002042|GABRR1|2569|gamma-aminobutyric acid (GABA) receptor, rho 1
hg18_v1_chr4_+_113437947_113438006	0.162424	SOX2.p2	NM_001102406|ALPK1|80216|alpha-kinase 1	NM_025144|ALPK1|80216|alpha-kinase 1	AK026323|ALPK1|80216|alpha-kinase 1	AK304708|ALPK1|80216|alpha-kinase 1	AK097246|ALPK1|80216|alpha-kinase 1	BC028117|ALPK1|80216|alpha-kinase 1	AK303489|ALPK1|80216|alpha-kinase 1	BX648798|ALPK1|80216|alpha-kinase 1	BC060780|ALPK1|80216|alpha-kinase 1
hg18_v1_chr19_+_56420131_56420179	0.162359	SOX2.p2	AK293934|CD33|945|CD33 molecule	NM_001082618|CD33|945|CD33 molecule	NM_001177608|CD33|945|CD33 molecule	NM_001772|CD33|945|CD33 molecule	AK309558|CD33|945|CD33 molecule	M23197|CD33|945|CD33 molecule	AY162464|CD33|945|CD33 molecule
hg18_v1_chr21_-_31995972_31996007	0.162337	SOX2.p2	AB032998|SCAF4|57466|SR-related CTD-associated factor 4	AK025748|SCAF4|57466|SR-related CTD-associated factor 4	AL117417|SCAF4|57466|SR-related CTD-associated factor 4
hg18_v1_chr17_-_24163517_24163629	0.162288	SOX2.p2	AK095569|C17orf63|55731|chromosome 17 open reading frame 63
hg18_v1_chr1_+_61697209_61697352	0.161587	SOX2.p2	AK096483|NFIA|4774|nuclear factor I/A
hg18_v1_chr6_-_27988152_27988152	0.161544	SOX2.p2	BC136881|OR2B2|81697|olfactory receptor, family 2, subfamily B, member 2	BC136901|OR2B2|81697|olfactory receptor, family 2, subfamily B, member 2	NM_033057|OR2B2|81697|olfactory receptor, family 2, subfamily B, member 2
hg18_v1_chr16_+_30314276_30314347	0.161478	SOX2.p2	
hg18_v1_chr9_-_14076901_14077003	0.161353	SOX2.p2	BX537698|NFIB|4781|nuclear factor I/B
hg18_v1_chr22_+_19601723_19601939	0.160855	SOX2.p2	BC043500|CRKL|1399|v-crk sarcoma virus CT10 oncogene homolog (avian)-like
hg18_v1_chr11_+_5667392_5667453	0.160815	SOX2.p2	AK298934|TRIM22|10346|tripartite motif containing 22
hg18_v1_chr19_+_40298571_40298638	0.160519	SOX2.p2	NM_001136007|FXYD3|5349|FXYD domain containing ion transport regulator 3	NM_001136008|FXYD3|5349|FXYD domain containing ion transport regulator 3	NM_001136009|FXYD3|5349|FXYD domain containing ion transport regulator 3	NM_001136010|FXYD3|5349|FXYD domain containing ion transport regulator 3	NM_001136011|FXYD3|5349|FXYD domain containing ion transport regulator 3	NM_001136012|FXYD3|5349|FXYD domain containing ion transport regulator 3	NM_005971|FXYD3|5349|FXYD domain containing ion transport regulator 3	NM_021910|FXYD3|5349|FXYD domain containing ion transport regulator 3	BC090044|FXYD3|5349|FXYD domain containing ion transport regulator 3	U28249|FXYD3|5349|FXYD domain containing ion transport regulator 3
hg18_v1_chr8_+_7731402_7731402	0.160408	SOX2.p2	AJ314834|DEFB104A|140596|defensin, beta 104A	BC100848|DEFB104A|140596|defensin, beta 104A	BC100849|DEFB104A|140596|defensin, beta 104A	BC100850|DEFB104A|140596|defensin, beta 104A	BC100851|DEFB104A|140596|defensin, beta 104A	NM_001040702|DEFB104B|503618|defensin, beta 104B	NM_080389|DEFB104A|140596|defensin, beta 104A
hg18_v1_chr1_-_200182090_200182313	0.160208	SOX2.p2	AK126474|LMOD1|25802|leiomodin 1 (smooth muscle)	BC001755|LMOD1|25802|leiomodin 1 (smooth muscle)	X54162|LMOD1|25802|leiomodin 1 (smooth muscle)	AK304852|LMOD1|25802|leiomodin 1 (smooth muscle)	BC080187|LMOD1|25802|leiomodin 1 (smooth muscle)	AK295824|LMOD1|25802|leiomodin 1 (smooth muscle)
hg18_v1_chr1_+_357502_357521	0.16013	SOX2.p2	BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3	BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3	NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29	NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3	NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16
hg18_v1_chr2_+_196229715_196229926	0.160064	SOX2.p2	BC029413|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	NM_001127257|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	CR749813|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10
hg18_v1_chr15_+_47502666_47502771	0.159675	SOX2.p2	NM_002009|FGF7|2252|fibroblast growth factor 7	BC010956|FGF7|2252|fibroblast growth factor 7	AK313160|FGF7|2252|fibroblast growth factor 7	M60828|FGF7|2252|fibroblast growth factor 7	S81661|FGF7|2252|fibroblast growth factor 7	CR617541|FGF7|2252|fibroblast growth factor 7	CR609737|FGF7|2252|fibroblast growth factor 7
hg18_v1_chr1_+_89871281_89871424	0.159631	SOX2.p2	AK127881|LRRC8C|84230|leucine rich repeat containing 8 family, member C	AB081509|LRRC8C|84230|leucine rich repeat containing 8 family, member C	BC103929|LRRC8C|84230|leucine rich repeat containing 8 family, member C	BC113973|LRRC8C|84230|leucine rich repeat containing 8 family, member C
hg18_v1_chrX_+_48127911_48127911	0.159591	SOX2.p2	BC005325|SSX4|6759|synovial sarcoma, X breakpoint 4	NM_001034832|SSX4B|548313|synovial sarcoma, X breakpoint 4B	NM_001040612|SSX4B|548313|synovial sarcoma, X breakpoint 4B	NM_005636|SSX4|6759|synovial sarcoma, X breakpoint 4	NM_175729|SSX4|6759|synovial sarcoma, X breakpoint 4
hg18_v1_chr19_+_56420181_56420198	0.159112	SOX2.p2	BC028152|CD33|945|CD33 molecule	AK304810|CD33|945|CD33 molecule	DQ891726|CD33|945|CD33 molecule	DQ894903|CD33|945|CD33 molecule	CR592075|CD33|945|CD33 molecule
hg18_v1_chr11_-_129322510_129322726	0.15906	SOX2.p2	AB033057|PRDM10|56980|PR domain containing 10	BC117415|PRDM10|56980|PR domain containing 10	BC143612|PRDM10|56980|PR domain containing 10	BC143613|PRDM10|56980|PR domain containing 10	AF503171|PRDM10|56980|PR domain containing 10	AF275817|PRDM10|56980|PR domain containing 10	NM_199438|PRDM10|56980|PR domain containing 10	NM_199439|PRDM10|56980|PR domain containing 10
hg18_v1_chr9_-_14303899_14303907	0.159047	SOX2.p2	AK299605|NFIB|4781|nuclear factor I/B
hg18_v1_chr4_-_83566045_83566089	0.159015	SOX2.p2	
hg18_v1_chr6_-_139737042_139737191	0.158598	SOX2.p2	NM_001168389|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2	NM_001168388|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
hg18_v1_chr18_-_3209986_3210105	0.158159	SOX2.p2	AJ621424|MYOM1|8736|myomesin 1, 185kDa	AK125322|MYOM1|8736|myomesin 1, 185kDa	NM_003803|MYOM1|8736|myomesin 1, 185kDa	NM_019856|MYOM1|8736|myomesin 1, 185kDa
hg18_v1_chr11_-_123130435_123130462	0.158115	SOX2.p2	NM_001005188|OR6X1|390260|olfactory receptor, family 6, subfamily X, member 1	BC136855|OR6X1|390260|olfactory receptor, family 6, subfamily X, member 1	BC136856|OR6X1|390260|olfactory receptor, family 6, subfamily X, member 1
hg18_v1_chrX_-_128804972_128805241	0.157737	SOX2.p2	AK001524|ZDHHC9|51114|zinc finger, DHHC-type containing 9	BC000035|ZDHHC9|51114|zinc finger, DHHC-type containing 9	AB209807|ZDHHC9|51114|zinc finger, DHHC-type containing 9	NM_001008222|ZDHHC9|51114|zinc finger, DHHC-type containing 9
hg18_v1_chr12_-_242255_242299	0.157495	SOX2.p2	AK313511|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	AF462445|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	AK295904|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	AK296127|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	AK296209|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	BC020867|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	BC022392|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	NM_001190997|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	NM_016615|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13
hg18_v1_chr5_+_86599350_86599533	0.157031	SOX2.p2	CR749722|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1
hg18_v1_chr18_+_53967544_53967566	0.15645	SOX2.p2	AY112983|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	AY112984|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	DQ181796|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	NM_001144965|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	NM_001144968|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	NM_001144969|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	NM_001144971|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	AY112985|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like
hg18_v1_chr10_-_13789628_13789762	0.156202	SOX2.p2	AK057828|FRMD4A|55691|FERM domain containing 4A
hg18_v1_chr11_+_117720268_117720321	0.156179	SOX2.p2	NM_000073|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	AK313966|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	AK315895|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	AK310622|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	BC069685|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	X04145|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	AK223314|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	AK310578|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	BC113830|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)
hg18_v1_chr12_-_85756766_85756811	0.156161	SOX2.p2	BC035851|MGAT4C|25834|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)	NM_013244|MGAT4C|25834|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)
hg18_v1_chr19_-_1518875_1519056	0.15606	SOX2.p2	DQ225272|MEX3D|399664|mex-3 homolog D (C. elegans)	DQ225273|MEX3D|399664|mex-3 homolog D (C. elegans)	AY950680|MEX3D|399664|mex-3 homolog D (C. elegans)	NM_001174118|MEX3D|399664|mex-3 homolog D (C. elegans)	NM_203304|MEX3D|399664|mex-3 homolog D (C. elegans)
hg18_v1_chr21_+_33936494_33936956	0.15602	SOX2.p2	AK027846|ITSN1|6453|intersectin 1 (SH3 domain protein)	BC058925|ITSN1|6453|intersectin 1 (SH3 domain protein)	AF114487|ITSN1|6453|intersectin 1 (SH3 domain protein)	AF114488|ITSN1|6453|intersectin 1 (SH3 domain protein)	NM_001001132|ITSN1|6453|intersectin 1 (SH3 domain protein)	NM_003024|ITSN1|6453|intersectin 1 (SH3 domain protein)	AK075290|ITSN1|6453|intersectin 1 (SH3 domain protein)	BC039036|ITSN1|6453|intersectin 1 (SH3 domain protein)	BC117560|ITSN1|6453|intersectin 1 (SH3 domain protein)	AK300274|ITSN1|6453|intersectin 1 (SH3 domain protein)	BC073744|ITSN1|6453|intersectin 1 (SH3 domain protein)	AK074554|ITSN1|6453|intersectin 1 (SH3 domain protein)	BC020269|ITSN1|6453|intersectin 1 (SH3 domain protein)	BC013578|ITSN1|6453|intersectin 1 (SH3 domain protein)	AF064243|ITSN1|6453|intersectin 1 (SH3 domain protein)	AF064244|ITSN1|6453|intersectin 1 (SH3 domain protein)	DQ679754|ITSN1|6453|intersectin 1 (SH3 domain protein)	DQ679755|ITSN1|6453|intersectin 1 (SH3 domain protein)	DQ679756|ITSN1|6453|intersectin 1 (SH3 domain protein)	DQ679757|ITSN1|6453|intersectin 1 (SH3 domain protein)	EU107386|ITSN1|6453|intersectin 1 (SH3 domain protein)	EU120735|ITSN1|6453|intersectin 1 (SH3 domain protein)	EU120736|ITSN1|6453|intersectin 1 (SH3 domain protein)	EU140799|ITSN1|6453|intersectin 1 (SH3 domain protein)	EU191901|ITSN1|6453|intersectin 1 (SH3 domain protein)	BC116185|ITSN1|6453|intersectin 1 (SH3 domain protein)	BC116186|ITSN1|6453|intersectin 1 (SH3 domain protein)
hg18_v1_chr4_-_47678187_47678306	0.155938	SOX2.p2	M84741|CNGA1|1259|cyclic nucleotide gated channel alpha 1	NM_001142564|CNGA1|1259|cyclic nucleotide gated channel alpha 1	S42457|CNGA1|1259|cyclic nucleotide gated channel alpha 1
hg18_v1_chr17_+_7269658_7269683	0.155903	SOX2.p2	BC031286|C17orf74|201243|chromosome 17 open reading frame 74	BC048010|C17orf74|201243|chromosome 17 open reading frame 74	NM_175734|C17orf74|201243|chromosome 17 open reading frame 74	BC044816|C17orf74|201243|chromosome 17 open reading frame 74
hg18_v1_chrX_+_36163971_36163971	0.155643	SOX2.p2	NM_001098843|CXorf30|645090|chromosome X open reading frame 30
hg18_v1_chr7_-_139825602_139825660	0.155633	SOX2.p2	CR601180|MKRN1|23608|makorin ring finger protein 1	AB209298|MKRN1|23608|makorin ring finger protein 1	DQ892404|MKRN1|23608|makorin ring finger protein 1	EU176516|MKRN1|23608|makorin ring finger protein 1	BC064838|MKRN1|23608|makorin ring finger protein 1	AM236048|MKRN1|23608|makorin ring finger protein 1	BC037400|MKRN1|23608|makorin ring finger protein 1	BC051821|MKRN1|23608|makorin ring finger protein 1	BC012398|MKRN1|23608|makorin ring finger protein 1	AK297361|MKRN1|23608|makorin ring finger protein 1	AK315552|MKRN1|23608|makorin ring finger protein 1
hg18_v1_chr7_+_101245812_101246047	0.155583	SOX2.p2	AK222832|CUX1|1523|cut-like homeobox 1	AK303151|CUX1|1523|cut-like homeobox 1	AK125097|CUX1|1523|cut-like homeobox 1	BC066592|CUX1|1523|cut-like homeobox 1	L12579|CUX1|1523|cut-like homeobox 1	NM_001913|CUX1|1523|cut-like homeobox 1	AK297548|CUX1|1523|cut-like homeobox 1	BC012323|CUX1|1523|cut-like homeobox 1	AK122726|CUX1|1523|cut-like homeobox 1	BC025422|CUX1|1523|cut-like homeobox 1	NM_181500|CUX1|1523|cut-like homeobox 1
hg18_v1_chr11_-_46572160_46572199	0.155532	SOX2.p2	AK304530|AMBRA1|55626|autophagy/beclin-1 regulator 1
hg18_v1_chr20_-_29457650_29457729	0.15547	SOX2.p2	AY501000|DEFB121|245934|defensin, beta 121	BC130607|DEFB121|245934|defensin, beta 121	BC130609|DEFB121|245934|defensin, beta 121	NM_001011878|DEFB121|245934|defensin, beta 121
hg18_v1_chr5_+_61637822_61637857	0.155137	SOX2.p2	BC047544|KIF2A|3796|kinesin heavy chain member 2A
hg18_v1_chr9_-_126945536_126945689	0.155104	SOX2.p2	BC104030|SCAI|286205|suppressor of cancer cell invasion	BC104031|SCAI|286205|suppressor of cancer cell invasion	BC104032|SCAI|286205|suppressor of cancer cell invasion	AK098024|SCAI|286205|suppressor of cancer cell invasion	AK093983|SCAI|286205|suppressor of cancer cell invasion	NM_001144877|SCAI|286205|suppressor of cancer cell invasion	NM_173690|SCAI|286205|suppressor of cancer cell invasion
hg18_v1_chr7_+_116447527_116447676	0.155098	SOX2.p2	AY009152|ST7|7982|suppression of tumorigenicity 7	AY009153|ST7|7982|suppression of tumorigenicity 7	AK297510|ST7|7982|suppression of tumorigenicity 7
hg18_v1_chr1_+_40688360_40688414	0.155095	SOX2.p2	AK091612|ZNF643|65243|zinc finger protein 643	AL137241|ZNF643|65243|zinc finger protein 643
hg18_v1_chr17_-_53849888_53849897	0.154846	SOX2.p2	CR749257|RNF43|54894|ring finger protein 43
hg18_v1_chr7_-_7541974_7541984	0.15482	SOX2.p2	BC136892|COL28A1|340267|collagen, type XXVIII, alpha 1	BC144431|COL28A1|340267|collagen, type XXVIII, alpha 1	AJ890451|COL28A1|340267|collagen, type XXVIII, alpha 1	NM_001037763|COL28A1|340267|collagen, type XXVIII, alpha 1
hg18_v1_chr2_+_232281470_232281487	0.154649	SOX2.p2	CR612758|PTMA|5757|prothymosin, alpha	NM_001099285|PTMA|5757|prothymosin, alpha	NM_002823|PTMA|5757|prothymosin, alpha	BC022433|PTMA|5757|prothymosin, alpha	AK223605|PTMA|5757|prothymosin, alpha	AK314106|PTMA|5757|prothymosin, alpha	M14630|PTMA|5757|prothymosin, alpha	CR594103|PTMA|5757|prothymosin, alpha	BC034921|PTMA|5757|prothymosin, alpha
hg18_v1_chr1_+_89871231_89871236	0.154385	SOX2.p2	NM_032270|LRRC8C|84230|leucine rich repeat containing 8 family, member C
hg18_v1_chr14_+_73884947_73884964	0.154285	SOX2.p2	BC053325|VRTN|55237|vertebrae development homolog (pig)	AK023213|VRTN|55237|vertebrae development homolog (pig)	AK001673|VRTN|55237|vertebrae development homolog (pig)
hg18_v1_chr10_+_17311307_17311331	0.154165	SOX2.p2	CR599648|VIM|7431|vimentin	CR616791|VIM|7431|vimentin	CR618218|VIM|7431|vimentin	CR623356|VIM|7431|vimentin	CR607117|VIM|7431|vimentin	Z19554|VIM|7431|vimentin	CR596331|VIM|7431|vimentin	CR621990|VIM|7431|vimentin	CR617642|VIM|7431|vimentin	CR597703|VIM|7431|vimentin	CR620841|VIM|7431|vimentin	CR617507|VIM|7431|vimentin
hg18_v1_chr2_+_74914742_74914795	0.154021	SOX2.p2	AF148513|HK2|3099|hexokinase 2	BC021116|HK2|3099|hexokinase 2	BC064369|HK2|3099|hexokinase 2	AK290357|HK2|3099|hexokinase 2
hg18_v1_chr7_-_105304159_105304283	0.153917	SOX2.p2	AK095475|ATXN7L1|222255|ataxin 7-like 1	AK097574|ATXN7L1|222255|ataxin 7-like 1	BC030616|ATXN7L1|222255|ataxin 7-like 1	NM_020725|ATXN7L1|222255|ataxin 7-like 1	NM_152749|ATXN7L1|222255|ataxin 7-like 1
hg18_v1_chr9_-_14388981_14388981	0.153742	SOX2.p2	AK131233|NFIB|4781|nuclear factor I/B	NM_001190738|NFIB|4781|nuclear factor I/B
hg18_v1_chr10_+_97793054_97793689	0.153342	SOX2.p2	BC043175|CCNJ|54619|cyclin J	NM_001134375|CCNJ|54619|cyclin J	NM_001134376|CCNJ|54619|cyclin J	NM_019084|CCNJ|54619|cyclin J	AK092360|CCNJ|54619|cyclin J	AK297264|CCNJ|54619|cyclin J
hg18_v1_chr6_-_138231006_138231081	0.153087	SOX2.p2	
hg18_v1_chr15_-_41381744_41381744	0.152328	SOX2.p2	AF363393|TGM7|116179|transglutaminase 7	NM_052955|TGM7|116179|transglutaminase 7
hg18_v1_chr11_-_48330574_48330574	0.151899	SOX2.p2	NM_001005513|OR4C45|403257|olfactory receptor, family 4, subfamily C, member 45
hg18_v1_chr1_-_178100204_178100211	0.15182	SOX2.p2	
hg18_v1_chr3_-_71625318_71625396	0.151786	SOX2.p2	AF146696|FOXP1|27086|forkhead box P1	BC054505|FOXP1|27086|forkhead box P1
hg18_v1_chr3_+_157874898_157874898	0.151687	SOX2.p2	NM_015508|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase
hg18_v1_chr1_-_52293634_52293634	0.151615	SOX2.p2	AF543416|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	NM_015913|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)
hg18_v1_chr12_-_11439752_11439764	0.151577	SOX2.p2	BC044827|PRB1|5542|proline-rich protein BstNI subfamily 1	NM_006248|PRB2|653247|proline-rich protein BstNI subfamily 2
hg18_v1_chr10_+_17311283_17311303	0.151356	SOX2.p2	X16478|VIM|7431|vimentin	AK222482|VIM|7431|vimentin	CR614482|VIM|7431|vimentin	CR622549|VIM|7431|vimentin	CR612980|VIM|7431|vimentin	CR590855|VIM|7431|vimentin	CR600582|VIM|7431|vimentin	CR600607|VIM|7431|vimentin	CR621958|VIM|7431|vimentin	CR622001|VIM|7431|vimentin	CR623317|VIM|7431|vimentin	CR591166|VIM|7431|vimentin	CR596422|VIM|7431|vimentin	CR601396|VIM|7431|vimentin	CR606048|VIM|7431|vimentin	CR608699|VIM|7431|vimentin	CR619643|VIM|7431|vimentin	CR622265|VIM|7431|vimentin	AF328728|VIM|7431|vimentin	CR598442|VIM|7431|vimentin	CR620869|VIM|7431|vimentin	CR616523|VIM|7431|vimentin	BC000163|VIM|7431|vimentin	BC030573|VIM|7431|vimentin
hg18_v1_chr2_-_85494639_85494656	0.150875	SOX2.p2	AK313898|CAPG|822|capping protein (actin filament), gelsolin-like	AK300507|CAPG|822|capping protein (actin filament), gelsolin-like
hg18_v1_chr15_+_66133709_66133721	0.150732	SOX2.p2	BC053685|PIAS1|8554|protein inhibitor of activated STAT, 1	AF077951|PIAS1|8554|protein inhibitor of activated STAT, 1	EF487997|PIAS1|8554|protein inhibitor of activated STAT, 1	EF487998|PIAS1|8554|protein inhibitor of activated STAT, 1	FJ997900|PIAS1|8554|protein inhibitor of activated STAT, 1	AY826819|PIAS1|8554|protein inhibitor of activated STAT, 1
hg18_v1_chr3_+_120347686_120347687	0.150637	SOX2.p2	AK057421|C3orf30|152405|chromosome 3 open reading frame 30	NM_152539|C3orf30|152405|chromosome 3 open reading frame 30	BC130475|C3orf30|152405|chromosome 3 open reading frame 30	BC144197|C3orf30|152405|chromosome 3 open reading frame 30
hg18_v1_chr19_+_56452775_56452775	0.150537	SOX2.p2	AK097554|C19orf75|284369|chromosome 19 open reading frame 75	NM_173635|C19orf75|284369|chromosome 19 open reading frame 75
hg18_v1_chr16_-_4262696_4262962	0.150479	SOX2.p2	X57435|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)	DQ893617|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)	DQ895293|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)	CR541726|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)	CR610803|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)	CR605422|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)	BC010576|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)
hg18_v1_chr4_-_185921384_185921392	0.15039	SOX2.p2	CR598751|ACSL1|2180|acyl-CoA synthetase long-chain family member 1
hg18_v1_chrX_+_128501862_128502097	0.149991	SOX2.p2	AK226116|OCRL|4952|oculocerebrorenal syndrome of Lowe	BC094726|OCRL|4952|oculocerebrorenal syndrome of Lowe	NM_000276|OCRL|4952|oculocerebrorenal syndrome of Lowe	NM_001587|OCRL|4952|oculocerebrorenal syndrome of Lowe	U57627|OCRL|4952|oculocerebrorenal syndrome of Lowe	AK293107|OCRL|4952|oculocerebrorenal syndrome of Lowe	BC130612|OCRL|4952|oculocerebrorenal syndrome of Lowe	BC144106|OCRL|4952|oculocerebrorenal syndrome of Lowe	BC025253|OCRL|4952|oculocerebrorenal syndrome of Lowe
hg18_v1_chr15_+_94670160_94670170	0.14999	SOX2.p2	BC106083|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	NM_001145155|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	FM208183|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2
hg18_v1_chr1_-_159282312_159282370	0.149986	SOX2.p2	AK314876|USF1|7391|upstream transcription factor 1	BC035505|USF1|7391|upstream transcription factor 1
hg18_v1_chr9_+_27514311_27514334	0.149986	SOX2.p2	AF146759|IFNK|56832|interferon, kappa	AF315688|IFNK|56832|interferon, kappa	NM_020124|IFNK|56832|interferon, kappa	AY358855|IFNK|56832|interferon, kappa
hg18_v1_chr16_+_66464519_66464536	0.149947	SOX2.p2	BC043616|EDC4|23644|enhancer of mRNA decapping 4	BC064567|EDC4|23644|enhancer of mRNA decapping 4	L26339|EDC4|23644|enhancer of mRNA decapping 4
hg18_v1_chr1_-_31311073_31311136	0.149928	SOX2.p2	BC013398|PUM1|9698|pumilio homolog 1 (Drosophila)	D43951|PUM1|9698|pumilio homolog 1 (Drosophila)	AK291779|PUM1|9698|pumilio homolog 1 (Drosophila)	AK300457|PUM1|9698|pumilio homolog 1 (Drosophila)	AF315592|PUM1|9698|pumilio homolog 1 (Drosophila)	AK096476|PUM1|9698|pumilio homolog 1 (Drosophila)	AK222605|PUM1|9698|pumilio homolog 1 (Drosophila)
hg18_v1_chr12_+_68028407_68028546	0.149714	SOX2.p2	AK311779|LYZ|4069|lysozyme	J03801|LYZ|4069|lysozyme	FJ795023|LYZ|4069|lysozyme	BC004147|LYZ|4069|lysozyme	M21119|LYZ|4069|lysozyme	CR607267|LYZ|4069|lysozyme	M19045|LYZ|4069|lysozyme	DQ892271|LYZ|4069|lysozyme	DQ895472|LYZ|4069|lysozyme	U25677|LYZ|4069|lysozyme	CR615077|LYZ|4069|lysozyme
hg18_v1_chr1_+_61642287_61642335	0.149272	SOX2.p2	AK024964|NFIA|4774|nuclear factor I/A
hg18_v1_chr12_-_49763405_49763501	0.149227	SOX2.p2	BC017221|CSRNP2|81566|cysteine-serine-rich nuclear protein 2	AK313080|CSRNP2|81566|cysteine-serine-rich nuclear protein 2
hg18_v1_chr1_-_53566331_53566408	0.149017	SOX2.p2	NM_033300|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
hg18_v1_chr7_-_33047042_33047046	0.148808	SOX2.p2	BC015856|NT5C3|51251|5'-nucleotidase, cytosolic III	NM_001166118|NT5C3|51251|5'-nucleotidase, cytosolic III	NM_016489|NT5C3|51251|5'-nucleotidase, cytosolic III
hg18_v1_chr22_-_17303654_17303809	0.148691	SOX2.p2	AB209472|PRODH|5625|proline dehydrogenase (oxidase) 1	BC068260|PRODH|5625|proline dehydrogenase (oxidase) 1	BC094736|PRODH|5625|proline dehydrogenase (oxidase) 1	BC036534|PRODH|5625|proline dehydrogenase (oxidase) 1
hg18_v1_chr17_-_40655347_40655423	0.14862	SOX2.p2	CR604709|LOC339192|339192|hypothetical LOC339192
hg18_v1_chr4_+_53938488_53938565	0.148605	SOX2.p2	AK295737|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg18_v1_chr7_+_73506047_73506154	0.148463	SOX2.p2	AF151354|GTF2IRD1|9569|GTF2I repeat domain containing 1	NM_016328|GTF2IRD1|9569|GTF2I repeat domain containing 1
hg18_v1_chr4_+_184817477_184817533	0.148296	SOX2.p2	BC139745|C4orf41|60684|chromosome 4 open reading frame 41
hg18_v1_chr11_-_95715976_95716126	0.14827	SOX2.p2	AB058722|MAML2|84441|mastermind-like 2 (Drosophila)	AY040322|MAML2|84441|mastermind-like 2 (Drosophila)	BC152449|MAML2|84441|mastermind-like 2 (Drosophila)	NM_032427|MAML2|84441|mastermind-like 2 (Drosophila)	AK308157|MAML2|84441|mastermind-like 2 (Drosophila)
hg18_v1_chr18_+_70352779_70352843	0.148112	SOX2.p2	AK314572|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	AK098369|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	AK289916|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	AK303708|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	BC110295|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	AJ417564|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	BC113512|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	BC117122|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)
hg18_v1_chrX_-_130250715_130250715	0.147979	SOX2.p2	BC028312|IGSF1|3547|immunoglobulin superfamily, member 1	NM_001170963|IGSF1|3547|immunoglobulin superfamily, member 1
hg18_v1_chr11_-_71429747_71429836	0.147946	SOX2.p2	AK290509|NUMA1|4926|nuclear mitotic apparatus protein 1	AK309041|NUMA1|4926|nuclear mitotic apparatus protein 1
hg18_v1_chr6_-_91063301_91063365	0.147726	SOX2.p2	AK309526|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2	NM_001170794|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2
hg18_v1_chr20_-_33658823_33658850	0.147688	SOX2.p2	BC029951|FER1L4|80307|fer-1-like 4 (C. elegans) pseudogene	AY461812|FER1L4|80307|fer-1-like 4 (C. elegans) pseudogene
hg18_v1_chr1_+_43628136_43628170	0.147573	SOX2.p2	BC017576|C1orf84|149469|chromosome 1 open reading frame 84	NM_001012961|C1orf84|149469|chromosome 1 open reading frame 84
hg18_v1_chr7_+_28418668_28418668	0.147322	SOX2.p2	L05515|CREB5|9586|cAMP responsive element binding protein 5	NM_182898|CREB5|9586|cAMP responsive element binding protein 5
hg18_v1_chr4_+_78172966_78173092	0.147196	SOX2.p2	AK124592|SEPT11|55752|septin 11
hg18_v1_chr1_+_6767968_6768188	0.146894	SOX2.p2	AB020640|CAMTA1|23261|calmodulin binding transcription activator 1	BC151835|CAMTA1|23261|calmodulin binding transcription activator 1	NM_001195563|CAMTA1|23261|calmodulin binding transcription activator 1	NM_015215|CAMTA1|23261|calmodulin binding transcription activator 1	BC116457|CAMTA1|23261|calmodulin binding transcription activator 1
hg18_v1_chr7_-_25234582_25234629	0.146774	SOX2.p2	AB040290|NPVF|64111|neuropeptide VF precursor	AF330057|NPVF|64111|neuropeptide VF precursor	AF440392|NPVF|64111|neuropeptide VF precursor	NM_022150|NPVF|64111|neuropeptide VF precursor
hg18_v1_chr4_-_140696740_140697026	0.146771	SOX2.p2	AF462150|SETD7|80854|SET domain containing (lysine methyltransferase) 7	BC066361|SETD7|80854|SET domain containing (lysine methyltransferase) 7	AK310856|SETD7|80854|SET domain containing (lysine methyltransferase) 7	BC121055|SETD7|80854|SET domain containing (lysine methyltransferase) 7	BC121056|SETD7|80854|SET domain containing (lysine methyltransferase) 7	AB051504|SETD7|80854|SET domain containing (lysine methyltransferase) 7	AF448510|SETD7|80854|SET domain containing (lysine methyltransferase) 7	NM_030648|SETD7|80854|SET domain containing (lysine methyltransferase) 7
hg18_v1_chr22_+_42900168_42900211	0.146347	SOX2.p2	NM_001137605|PARVG|64098|parvin, gamma	AK309348|PARVG|64098|parvin, gamma	AK293360|PARVG|64098|parvin, gamma
hg18_v1_chr10_-_11614279_11614279	0.146177	SOX2.p2	NM_001080491|USP6NL|9712|USP6 N-terminal like
hg18_v1_chr19_-_53239030_53239115	0.146153	SOX2.p2	BC126133|CABP5|56344|calcium binding protein 5	BC126135|CABP5|56344|calcium binding protein 5	AF169159|CABP5|56344|calcium binding protein 5	NM_019855|CABP5|56344|calcium binding protein 5
hg18_v1_chr22_+_19601940_19602066	0.146077	SOX2.p2	CR456423|CRKL|1399|v-crk sarcoma virus CT10 oncogene homolog (avian)-like
hg18_v1_chr1_-_199657468_199657496	0.145762	SOX2.p2	AJ315823|TNNI1|7135|troponin I type 1 (skeletal, slow)	BC012601|TNNI1|7135|troponin I type 1 (skeletal, slow)	AK223588|TNNI1|7135|troponin I type 1 (skeletal, slow)	J04760|TNNI1|7135|troponin I type 1 (skeletal, slow)	AK311896|TNNI1|7135|troponin I type 1 (skeletal, slow)	AL831820|TNNI1|7135|troponin I type 1 (skeletal, slow)	AL831975|TNNI1|7135|troponin I type 1 (skeletal, slow)	BC012600|TNNI1|7135|troponin I type 1 (skeletal, slow)	BX510903|TNNI1|7135|troponin I type 1 (skeletal, slow)	NM_003281|TNNI1|7135|troponin I type 1 (skeletal, slow)
hg18_v1_chr1_-_43628035_43628041	0.145758	SOX2.p2	BC010019|MED8|112950|mediator complex subunit 8
hg18_v1_chr3_-_161766005_161766023	0.145757	SOX2.p2	BC028691|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)	AK291041|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)
hg18_v1_chrX_+_12904207_12904321	0.145292	SOX2.p2	BC104464|TMSB4X|7114|thymosin beta 4, X-linked	BC104465|TMSB4X|7114|thymosin beta 4, X-linked	CR605307|TMSL3|7117|thymosin-like 3	BT007090|TMSB4X|7114|thymosin beta 4, X-linked	X02493|TMSB4X|7114|thymosin beta 4, X-linked
hg18_v1_chr19_+_53664276_53664384	0.145281	SOX2.p2	NM_004228|CYTH2|9266|cytohesin 2	NM_017457|CYTH2|9266|cytohesin 2	CR599552|CYTH2|9266|cytohesin 2
hg18_v1_chr7_+_77307382_77307508	0.145252	SOX2.p2	BC022419|PHTF2|57157|putative homeodomain transcription factor 2	NM_001127357|PHTF2|57157|putative homeodomain transcription factor 2	NM_001127359|PHTF2|57157|putative homeodomain transcription factor 2	NM_020432|PHTF2|57157|putative homeodomain transcription factor 2	AL831969|PHTF2|57157|putative homeodomain transcription factor 2	BC127093|PHTF2|57157|putative homeodomain transcription factor 2	BC127094|PHTF2|57157|putative homeodomain transcription factor 2	AM392983|PHTF2|57157|putative homeodomain transcription factor 2	AM393200|PHTF2|57157|putative homeodomain transcription factor 2
hg18_v1_chr7_+_123083096_123083251	0.145189	SOX2.p2	NM_207163|LMOD2|442721|leiomodin 2 (cardiac)	AK299434|LMOD2|442721|leiomodin 2 (cardiac)	AK299389|LMOD2|442721|leiomodin 2 (cardiac)	AK300698|LMOD2|442721|leiomodin 2 (cardiac)	BC017911|LMOD2|442721|leiomodin 2 (cardiac)	BC062765|LMOD2|442721|leiomodin 2 (cardiac)
hg18_v1_chrX_+_49104714_49104724	0.144903	SOX2.p2	CR542236|GAGE4|2576|G antigen 4	DQ891160|GAGE5|2577|G antigen 5	DQ894127|GAGE1|2543|G antigen 1	DQ894341|GAGE5|2577|G antigen 5	NM_001098405|GAGE12F|100008586|G antigen 12F	BC069086|GAGE7|2579|G antigen 7
hg18_v1_chr1_-_43197123_43197195	0.144865	SOX2.p2	AK292791|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1	AK293306|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1	AK296736|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1	AK312403|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1	AB208987|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1
hg18_v1_chr1_-_159282376_159282407	0.144678	SOX2.p2	NM_007122|USF1|7391|upstream transcription factor 1	NM_207005|USF1|7391|upstream transcription factor 1
hg18_v1_chr3_+_9748494_9748603	0.144669	SOX2.p2	AL713696|BRPF1|7862|bromodomain and PHD finger containing, 1
hg18_v1_chr5_-_138238953_138238963	0.14459	SOX2.p2	NM_015564|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2
hg18_v1_chr19_+_10932719_10932781	0.144209	SOX2.p2	CR612486|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	CR597216|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	BC035916|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
hg18_v1_chr5_-_135259403_135259414	0.144004	SOX2.p2	BC066283|IL9|3578|interleukin 9	BC066284|IL9|3578|interleukin 9	BC066285|IL9|3578|interleukin 9	BC066286|IL9|3578|interleukin 9	BC066287|IL9|3578|interleukin 9	M30134|IL9|3578|interleukin 9	NM_000590|IL9|3578|interleukin 9	S63356|IL9|3578|interleukin 9	X17543|IL9|3578|interleukin 9
hg18_v1_chr8_-_30121741_30121743	0.143948	SOX2.p2	NM_001100916|MBOAT4|619373|membrane bound O-acyltransferase domain containing 4	EU518495|MBOAT4|619373|membrane bound O-acyltransferase domain containing 4
hg18_v1_chr4_+_37655385_37655439	0.143897	SOX2.p2	AK303574|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1
hg18_v1_chr17_-_36996611_36996698	0.143817	SOX2.p2	BT007186|KRT14|3861|keratin 14	DQ890733|KRT14|3861|keratin 14	DQ892997|KRT14|3861|keratin 14	DQ893905|KRT14|3861|keratin 14	BC042437|KRT14|3861|keratin 14	BC002690|KRT14|3861|keratin 14	CR623868|KRT14|3861|keratin 14	CR613905|KRT14|3861|keratin 14	BC019097|KRT14|3861|keratin 14	BC094830|KRT14|3861|keratin 14	NM_000526|KRT14|3861|keratin 14	CR598848|KRT14|3861|keratin 14	CR603127|KRT14|3861|keratin 14	CR613487|KRT14|3861|keratin 14	CR618580|KRT14|3861|keratin 14	CR624973|KRT14|3861|keratin 14	CR626072|KRT14|3861|keratin 14
hg18_v1_chr1_+_37795101_37795193	0.143768	SOX2.p2	BX647913|DNALI1|7802|dynein, axonemal, light intermediate chain 1	NM_003462|DNALI1|7802|dynein, axonemal, light intermediate chain 1	BC039074|DNALI1|7802|dynein, axonemal, light intermediate chain 1	AF006386|DNALI1|7802|dynein, axonemal, light intermediate chain 1	AK225935|DNALI1|7802|dynein, axonemal, light intermediate chain 1	AK299918|DNALI1|7802|dynein, axonemal, light intermediate chain 1	BC046117|DNALI1|7802|dynein, axonemal, light intermediate chain 1	AK290502|DNALI1|7802|dynein, axonemal, light intermediate chain 1	AK295199|DNALI1|7802|dynein, axonemal, light intermediate chain 1
hg18_v1_chr15_+_82945223_82945347	0.143675	SOX2.p2	AK128624|ZSCAN2|54993|zinc finger and SCAN domain containing 2	BC041620|ZSCAN2|54993|zinc finger and SCAN domain containing 2	NM_001007072|ZSCAN2|54993|zinc finger and SCAN domain containing 2	NM_017894|ZSCAN2|54993|zinc finger and SCAN domain containing 2	NM_181877|ZSCAN2|54993|zinc finger and SCAN domain containing 2	AK131309|ZSCAN2|54993|zinc finger and SCAN domain containing 2	AK291224|ZSCAN2|54993|zinc finger and SCAN domain containing 2	AK000602|ZSCAN2|54993|zinc finger and SCAN domain containing 2	AY262259|ZSCAN2|54993|zinc finger and SCAN domain containing 2	AY279349|ZSCAN2|54993|zinc finger and SCAN domain containing 2
hg18_v1_chr1_+_144595224_144595224	0.143237	SOX2.p2	NM_001097616|GPR89C|728932|G protein-coupled receptor 89C
hg18_v1_chr10_+_97749837_97749872	0.142924	SOX2.p2	NM_001001732|CC2D2B|387707|coiled-coil and C2 domain containing 2B	NM_001159747|CC2D2B|387707|coiled-coil and C2 domain containing 2B	AK302377|CC2D2B|387707|coiled-coil and C2 domain containing 2B	BC075861|CC2D2B|387707|coiled-coil and C2 domain containing 2B
hg18_v1_chr10_+_17311282_17311282	0.142843	SOX2.p2	AK056766|VIM|7431|vimentin	AK091813|VIM|7431|vimentin	AK097336|VIM|7431|vimentin	AK098444|VIM|7431|vimentin	AK222507|VIM|7431|vimentin	AK222602|VIM|7431|vimentin
hg18_v1_chr3_+_73193499_73193499	0.142566	SOX2.p2	BC051316|EBLN2|55096|endogenous Borna-like N element-2	BC064501|EBLN2|55096|endogenous Borna-like N element-2	NM_018029|EBLN2|55096|endogenous Borna-like N element-2
hg18_v1_chr14_-_23623657_23623673	0.142485	SOX2.p2	M95925|NRL|4901|neural retina leucine zipper	M81840|NRL|4901|neural retina leucine zipper	NM_006177|NRL|4901|neural retina leucine zipper	BC012395|NRL|4901|neural retina leucine zipper
hg18_v1_chr7_-_107558021_107558036	0.142299	SOX2.p2	BC142619|LAMB4|22798|laminin, beta 4	BC140804|LAMB4|22798|laminin, beta 4	BC144591|LAMB4|22798|laminin, beta 4	AF028816|LAMB4|22798|laminin, beta 4	AK300385|LAMB4|22798|laminin, beta 4	NM_007356|LAMB4|22798|laminin, beta 4
hg18_v1_chr16_+_2746363_2746445	0.142186	SOX2.p2	
hg18_v1_chr11_-_70350509_70350520	0.142069	SOX2.p2	AK095088|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2
hg18_v1_chr9_+_114376709_114376794	0.141933	SOX2.p2	AK056181|KIAA1958|158405|KIAA1958
hg18_v1_chr14_-_88090641_88091251	0.141753	SOX2.p2	NM_007039|PTPN21|11099|protein tyrosine phosphatase, non-receptor type 21	X79510|PTPN21|11099|protein tyrosine phosphatase, non-receptor type 21
hg18_v1_chr8_+_1436938_1436975	0.14154	SOX2.p2	AF119818|DLGAP2|9228|discs, large (Drosophila) homolog-associated protein 2	AF119817|DLGAP2|9228|discs, large (Drosophila) homolog-associated protein 2	NM_004745|DLGAP2|9228|discs, large (Drosophila) homolog-associated protein 2
hg18_v1_chr11_+_5798119_5798141	0.141246	SOX2.p2	BC140732|OR52N2|390077|olfactory receptor, family 52, subfamily N, member 2	NM_001005174|OR52N2|390077|olfactory receptor, family 52, subfamily N, member 2
hg18_v1_chr1_+_32512298_32512556	0.141132	SOX2.p2	NM_001042771|LCK|3932|lymphocyte-specific protein tyrosine kinase	BC013200|LCK|3932|lymphocyte-specific protein tyrosine kinase	CR594236|LCK|3932|lymphocyte-specific protein tyrosine kinase	AK303073|LCK|3932|lymphocyte-specific protein tyrosine kinase	U07236|LCK|3932|lymphocyte-specific protein tyrosine kinase	DQ891675|LCK|3932|lymphocyte-specific protein tyrosine kinase	DQ894861|LCK|3932|lymphocyte-specific protein tyrosine kinase	AJ865079|LCK|3932|lymphocyte-specific protein tyrosine kinase	AF228313|LCK|3932|lymphocyte-specific protein tyrosine kinase
hg18_v1_chr5_+_65053749_65053956	0.14104	SOX2.p2	NM_020726|NLN|57486|neurolysin (metallopeptidase M3 family)	AK096416|NLN|57486|neurolysin (metallopeptidase M3 family)	AK292803|NLN|57486|neurolysin (metallopeptidase M3 family)	AJ300837|NLN|57486|neurolysin (metallopeptidase M3 family)	BC001644|NLN|57486|neurolysin (metallopeptidase M3 family)	BC004985|NLN|57486|neurolysin (metallopeptidase M3 family)	AB463138|NLN|57486|neurolysin (metallopeptidase M3 family)	AB033052|NLN|57486|neurolysin (metallopeptidase M3 family)
hg18_v1_chr8_+_7340777_7340877	0.140916	SOX2.p2	DQ119826|DEFB107A|245910|defensin, beta 107A	NM_001037668|DEFB107A|245910|defensin, beta 107A	NM_001040705|DEFB107B|503614|defensin, beta 107B	BC137510|DEFB107A|245910|defensin, beta 107A	BC137513|DEFB107A|245910|defensin, beta 107A	AF540979|DEFB107A|245910|defensin, beta 107A	AY122467|DEFB107A|245910|defensin, beta 107A
hg18_v1_chr9_+_132990760_132990830	0.14062	SOX2.p2	BC105998|NUP214|8021|nucleoporin 214kDa	AK307573|NUP214|8021|nucleoporin 214kDa	NM_005085|NUP214|8021|nucleoporin 214kDa	AL832609|NUP214|8021|nucleoporin 214kDa	X64228|NUP214|8021|nucleoporin 214kDa	BC045620|NUP214|8021|nucleoporin 214kDa	BC012500|NUP214|8021|nucleoporin 214kDa
hg18_v1_chrX_-_55225668_55225668	0.140517	SOX2.p2	NM_001190708|MTRNR2L10|100463488|MT-RNR2-like 10
hg18_v1_chr9_+_133259330_133259444	0.140407	SOX2.p2	BC002872|PRRC2B|84726|proline-rich coiled-coil 2B
hg18_v1_chr2_+_191009265_191009365	0.140107	SOX2.p2	AK098085|MFSD6|54842|major facilitator superfamily domain containing 6
hg18_v1_chr11_-_18504939_18505072	0.140075	SOX2.p2	DQ892792|TSG101|7251|tumor susceptibility gene 101	DQ896039|TSG101|7251|tumor susceptibility gene 101	AY207473|TSG101|7251|tumor susceptibility gene 101	AY207474|TSG101|7251|tumor susceptibility gene 101	CR606222|TSG101|7251|tumor susceptibility gene 101	CR623726|TSG101|7251|tumor susceptibility gene 101	CR617651|TSG101|7251|tumor susceptibility gene 101	CR598203|TSG101|7251|tumor susceptibility gene 101	CR590804|TSG101|7251|tumor susceptibility gene 101	BC002487|TSG101|7251|tumor susceptibility gene 101	U82130|TSG101|7251|tumor susceptibility gene 101	CR621064|TSG101|7251|tumor susceptibility gene 101	CR594582|TSG101|7251|tumor susceptibility gene 101	CR619803|TSG101|7251|tumor susceptibility gene 101	CR590335|TSG101|7251|tumor susceptibility gene 101	AK130787|TSG101|7251|tumor susceptibility gene 101	CR604898|TSG101|7251|tumor susceptibility gene 101	NM_006292|TSG101|7251|tumor susceptibility gene 101
hg18_v1_chr13_-_28190961_28191149	0.139843	SOX2.p2	BX537565|SLC46A3|283537|solute carrier family 46, member 3	BC060850|SLC46A3|283537|solute carrier family 46, member 3	BC068556|SLC46A3|283537|solute carrier family 46, member 3	CR611527|SLC46A3|283537|solute carrier family 46, member 3	AK093932|SLC46A3|283537|solute carrier family 46, member 3	BC036662|SLC46A3|283537|solute carrier family 46, member 3	NM_001135919|SLC46A3|283537|solute carrier family 46, member 3	NM_181785|SLC46A3|283537|solute carrier family 46, member 3
hg18_v1_chrX_-_153698930_153698991	0.139771	SOX2.p2	CR599156|HMGN1P37|728776|high-mobility group nucleosome binding domain 1 pseudogene 37	CR599799|HMGN1P37|728776|high-mobility group nucleosome binding domain 1 pseudogene 37	CR622902|HMGN1P37|728776|high-mobility group nucleosome binding domain 1 pseudogene 37	CR603215|HMGN1P37|728776|high-mobility group nucleosome binding domain 1 pseudogene 37
hg18_v1_chr1_-_100416358_100416388	0.13975	SOX2.p2	BC009613|LRRC39|127495|leucine rich repeat containing 39	NM_144620|LRRC39|127495|leucine rich repeat containing 39	AK096892|LRRC39|127495|leucine rich repeat containing 39	AL833417|LRRC39|127495|leucine rich repeat containing 39	BC022420|LRRC39|127495|leucine rich repeat containing 39	AY358131|LRRC39|127495|leucine rich repeat containing 39
hg18_v1_chr11_+_65026382_65026392	0.139619	SOX2.p2	
hg18_v1_chr2_+_46779827_46779983	0.139593	SOX2.p2	BC032862|SOCS5|9655|suppressor of cytokine signaling 5	AF073958|SOCS5|9655|suppressor of cytokine signaling 5	NM_144949|SOCS5|9655|suppressor of cytokine signaling 5
hg18_v1_chr19_+_18357966_18357999	0.139508	SOX2.p2	AB000584|GDF15|9518|growth differentiation factor 15	AK225431|GDF15|9518|growth differentiation factor 15	AK291530|GDF15|9518|growth differentiation factor 15	NM_004864|GDF15|9518|growth differentiation factor 15	BC008962|GDF15|9518|growth differentiation factor 15	U88323|GDF15|9518|growth differentiation factor 15	BC000529|GDF15|9518|growth differentiation factor 15	AF019770|GDF15|9518|growth differentiation factor 15	U51731|GDF15|9518|growth differentiation factor 15	BT019465|GDF15|9518|growth differentiation factor 15
hg18_v1_chr6_+_64403668_64403683	0.13949	SOX2.p2	AK307869|PHF3|23469|PHD finger protein 3
hg18_v1_chr5_-_32424444_32424519	0.139483	SOX2.p2	AK025481|ZFR|51663|zinc finger RNA binding protein
hg18_v1_chr14_-_101617680_101617795	0.13945	SOX2.p2	CR619460|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1
hg18_v1_chrX_+_100692071_100692244	0.138983	SOX2.p2	AB039670|ARMCX1|51309|armadillo repeat containing, X-linked 1	NM_016608|ARMCX1|51309|armadillo repeat containing, X-linked 1	CR749609|ARMCX1|51309|armadillo repeat containing, X-linked 1	AK222578|ARMCX1|51309|armadillo repeat containing, X-linked 1	CR616090|ARMCX1|51309|armadillo repeat containing, X-linked 1	AK074785|ARMCX1|51309|armadillo repeat containing, X-linked 1	BC002691|ARMCX1|51309|armadillo repeat containing, X-linked 1	AF248963|ARMCX1|51309|armadillo repeat containing, X-linked 1
hg18_v1_chr1_+_8928508_8928532	0.138977	SOX2.p2	NM_001215|CA6|765|carbonic anhydrase VI	AK300652|CA6|765|carbonic anhydrase VI	BC034350|CA6|765|carbonic anhydrase VI	M57892|CA6|765|carbonic anhydrase VI	AB102863|CA6|765|carbonic anhydrase VI	AB103091|CA6|765|carbonic anhydrase VI
hg18_v1_chr17_-_10362583_10362583	0.138614	SOX2.p2	AK310004|MYH1|4619|myosin, heavy chain 1, skeletal muscle, adult	NM_005963|MYH1|4619|myosin, heavy chain 1, skeletal muscle, adult
hg18_v1_chr1_-_166372526_166372562	0.138491	SOX2.p2	AK298797|GPR161|23432|G protein-coupled receptor 161
hg18_v1_chr2_+_36436873_36436939	0.138414	SOX2.p2	AB209139|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)	NM_016441|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)	AF167706|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)	BC111989|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)	BC113371|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)
hg18_v1_chr6_-_132875858_132876029	0.138026	SOX2.p2	U77942|STX7|8417|syntaxin 7	CR596095|STX7|8417|syntaxin 7	BC011975|STX7|8417|syntaxin 7	AK294911|STX7|8417|syntaxin 7	CR615646|STX7|8417|syntaxin 7	AK301464|STX7|8417|syntaxin 7	CR607128|STX7|8417|syntaxin 7	CR618907|STX7|8417|syntaxin 7	NM_003569|STX7|8417|syntaxin 7
hg18_v1_chr16_-_30705707_30706089	0.137922	SOX2.p2	AB002324|ZNF629|23361|zinc finger protein 629	NM_001080417|ZNF629|23361|zinc finger protein 629
hg18_v1_chr5_-_39460787_39460855	0.13773	SOX2.p2	AK314381|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)
hg18_v1_chr2_+_68445821_68445931	0.137618	SOX2.p2	NM_002664|PLEK|5341|pleckstrin	AK313756|PLEK|5341|pleckstrin	BC018549|PLEK|5341|pleckstrin	X07743|PLEK|5341|pleckstrin	AB208967|PLEK|5341|pleckstrin
hg18_v1_chr6_-_71069347_71069571	0.137612	SOX2.p2	X54412|COL9A1|1297|collagen, type IX, alpha 1	BC015409|COL9A1|1297|collagen, type IX, alpha 1	NM_001851|COL9A1|1297|collagen, type IX, alpha 1
hg18_v1_chr1_+_196874867_196875040	0.137064	SOX2.p2	BC121086|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	BC121087|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	BC127656|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	BC127657|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	BC148257|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	AY567999|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	AY429565|PTPRC|5788|protein tyrosine phosphatase, receptor type, C
hg18_v1_chr19_-_3930828_3931135	0.137032	SOX2.p2	M19997|EEF2|1938|eukaryotic translation elongation factor 2
hg18_v1_chr5_+_137231443_137231447	0.13703	SOX2.p2	NM_001135940|MYOT|9499|myotilin	NM_006790|MYOT|9499|myotilin	AK300088|MYOT|9499|myotilin
hg18_v1_chr1_+_40631603_40631603	0.136919	SOX2.p2	AK308280|SMAP2|64744|small ArfGAP2	NM_001198979|SMAP2|64744|small ArfGAP2
hg18_v1_chr1_-_27871306_27871346	0.136902	SOX2.p2	NM_002038|IFI6|2537|interferon, alpha-inducible protein 6	NM_022872|IFI6|2537|interferon, alpha-inducible protein 6	NM_022873|IFI6|2537|interferon, alpha-inducible protein 6
hg18_v1_chrX_+_55263515_55263570	0.136798	SOX2.p2	BC009230|PAGE5|90737|P antigen family, member 5 (prostate associated)	NM_130467|PAGE5|90737|P antigen family, member 5 (prostate associated)	NM_001013435|PAGE5|90737|P antigen family, member 5 (prostate associated)	AJ344352|PAGE5|90737|P antigen family, member 5 (prostate associated)	BC110803|PAGE5|90737|P antigen family, member 5 (prostate associated)
hg18_v1_chr3_+_99733432_99733567	0.136751	SOX2.p2	AK313375|GPR15|2838|G protein-coupled receptor 15	BC101779|GPR15|2838|G protein-coupled receptor 15	BC101781|GPR15|2838|G protein-coupled receptor 15	BC069437|GPR15|2838|G protein-coupled receptor 15	NM_005290|GPR15|2838|G protein-coupled receptor 15
hg18_v1_chr1_-_114156429_114156620	0.13652	SOX2.p2	AK002082|RSBN1|54665|round spermatid basic protein 1	BC026155|RSBN1|54665|round spermatid basic protein 1	NM_018364|RSBN1|54665|round spermatid basic protein 1	AK292552|RSBN1|54665|round spermatid basic protein 1
hg18_v1_chr12_+_47162552_47162552	0.136443	SOX2.p2	NM_152319|C12orf54|121273|chromosome 12 open reading frame 54
hg18_v1_chr1_-_159543847_159543879	0.136431	SOX2.p2	CR590470|MPZ|4359|myelin protein zero
hg18_v1_chr7_-_126670804_126670804	0.136301	SOX2.p2	NM_000845|GRM8|2918|glutamate receptor, metabotropic 8
hg18_v1_chr2_+_112996053_112996198	0.136229	SOX2.p2	AK126378|TTL|150465|tubulin tyrosine ligase
hg18_v1_chr16_+_56259657_56259760	0.136153	SOX2.p2	AK172801|GPR97|222487|G protein-coupled receptor 97	NM_170776|GPR97|222487|G protein-coupled receptor 97	BC064508|GPR97|222487|G protein-coupled receptor 97	AB049169|GPR97|222487|G protein-coupled receptor 97	AK310124|GPR97|222487|G protein-coupled receptor 97	AK301258|GPR97|222487|G protein-coupled receptor 97	BC044222|GPR97|222487|G protein-coupled receptor 97	AY140959|GPR97|222487|G protein-coupled receptor 97
hg18_v1_chr15_+_63609791_63609893	0.13613	SOX2.p2	AK074898|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	AK299234|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	AF161470|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	BC058912|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	NM_016395|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	BC035508|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	BC047685|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	BC009056|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	AK225120|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1
hg18_v1_chr3_+_153469421_153469444	0.135913	SOX2.p2	BC050535|MBNL1|4154|muscleblind-like (Drosophila)	BC043493|MBNL1|4154|muscleblind-like (Drosophila)
hg18_v1_chr7_+_63410620_63410620	0.135886	SOX2.p2	NM_001170905|ZNF736|728927|zinc finger protein 736
hg18_v1_chr1_-_11674264_11674293	0.135822	SOX2.p2	NM_001127325|MAD2L2|10459|MAD2 mitotic arrest deficient-like 2 (yeast)	AK094316|MAD2L2|10459|MAD2 mitotic arrest deficient-like 2 (yeast)
hg18_v1_chr1_+_117345894_117345962	0.135743	SOX2.p2	AK307542|CD101|9398|CD101 molecule	NM_004258|CD101|9398|CD101 molecule	AK298237|CD101|9398|CD101 molecule	BC130327|CD101|9398|CD101 molecule	BC136484|CD101|9398|CD101 molecule	BC171768|CD101|9398|CD101 molecule	Z33642|CD101|9398|CD101 molecule
hg18_v1_chr3_+_184453547_184453738	0.135428	SOX2.p2	NM_032047|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5	AK074424|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
hg18_v1_chr7_+_22733626_22733661	0.135237	SOX2.p2	X04403|IL6|3569|interleukin 6 (interferon, beta 2)
hg18_v1_chr19_-_60383280_60383531	0.13521	SOX2.p2	AK125182|SYT5|6861|synaptotagmin V	AK313067|SYT5|6861|synaptotagmin V	BC033683|SYT5|6861|synaptotagmin V	BC046157|SYT5|6861|synaptotagmin V	BC029962|SYT5|6861|synaptotagmin V	NM_003180|SYT5|6861|synaptotagmin V
hg18_v1_chr12_+_121218218_121218218	0.134961	SOX2.p2	AK124107|LRRC43|254050|leucine rich repeat containing 43	NM_152759|LRRC43|254050|leucine rich repeat containing 43
hg18_v1_chr15_-_72513053_72513111	0.134959	SOX2.p2	NM_001146030|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)
hg18_v1_chr20_-_55718351_55718439	0.134681	SOX2.p2	AF305616|PMEPA1|56937|prostate transmembrane protein, androgen induced 1	NM_020182|PMEPA1|56937|prostate transmembrane protein, androgen induced 1
hg18_v1_chr9_+_40690290_40690290	0.134615	SOX2.p2	BC040528|FAM75A7|26165|family with sequence similarity 75, member A7	NM_001083124|FAM75A3|727830|family with sequence similarity 75, member A3
hg18_v1_chr15_+_67094087_67094124	0.134611	SOX2.p2	NM_001184779|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5	NM_024505|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5	AF353088|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5	AF353089|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5	AK314689|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5	AK074071|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5
hg18_v1_chr12_-_43593977_43593977	0.134251	SOX2.p2	AK295125|NELL2|4753|NEL-like 2 (chicken)	NM_001145110|NELL2|4753|NEL-like 2 (chicken)
hg18_v1_chr22_+_21852551_21852690	0.134221	SOX2.p2	NM_004327|BCR|613|breakpoint cluster region	NM_021574|BCR|613|breakpoint cluster region	Y00661|BCR|613|breakpoint cluster region
hg18_v1_chr15_+_55298908_55299010	0.134182	SOX2.p2	AK294991|TCF12|6938|transcription factor 12	AK304007|TCF12|6938|transcription factor 12	AK311359|TCF12|6938|transcription factor 12	AK308101|TCF12|6938|transcription factor 12	NM_207040|TCF12|6938|transcription factor 12	BX537967|TCF12|6938|transcription factor 12	AM393573|TCF12|6938|transcription factor 12
hg18_v1_chr6_+_26473376_26473487	0.134076	SOX2.p2	NM_001197247|BTN3A2|11118|butyrophilin, subfamily 3, member A2	NM_001197249|BTN3A2|11118|butyrophilin, subfamily 3, member A2	NM_007047|BTN3A2|11118|butyrophilin, subfamily 3, member A2	AK312847|BTN3A2|11118|butyrophilin, subfamily 3, member A2	AK290880|BTN3A2|11118|butyrophilin, subfamily 3, member A2	U90546|BTN3A2|11118|butyrophilin, subfamily 3, member A2	AK303600|BTN3A2|11118|butyrophilin, subfamily 3, member A2	NM_001197248|BTN3A2|11118|butyrophilin, subfamily 3, member A2	CR626326|BTN3A2|11118|butyrophilin, subfamily 3, member A2	BC002832|BTN3A2|11118|butyrophilin, subfamily 3, member A2	BC020214|BTN3A2|11118|butyrophilin, subfamily 3, member A2	AK299417|BTN3A2|11118|butyrophilin, subfamily 3, member A2
hg18_v1_chr15_+_62578671_62578671	0.133716	SOX2.p2	NM_015042|ZNF609|23060|zinc finger protein 609
hg18_v1_chr6_+_106653429_106653566	0.133638	SOX2.p2	AK301341|PRDM1|639|PR domain containing 1, with ZNF domain	AY198415|PRDM1|639|PR domain containing 1, with ZNF domain	NM_182907|PRDM1|639|PR domain containing 1, with ZNF domain	BC103832|PRDM1|639|PR domain containing 1, with ZNF domain	BC103833|PRDM1|639|PR domain containing 1, with ZNF domain	BC103834|PRDM1|639|PR domain containing 1, with ZNF domain	BC103835|PRDM1|639|PR domain containing 1, with ZNF domain
hg18_v1_chr19_-_47498300_47498701	0.133535	SOX2.p2	CR407626|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)	D63391|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)	BC007863|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)	BC003016|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)	NM_002573|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)
hg18_v1_chr17_+_59875623_59875900	0.133448	SOX2.p2	AK300768|C17orf60|284021|chromosome 17 open reading frame 60	NM_001085423|C17orf60|284021|chromosome 17 open reading frame 60	BC018972|C17orf60|284021|chromosome 17 open reading frame 60	BC130406|C17orf60|284021|chromosome 17 open reading frame 60	BC136594|C17orf60|284021|chromosome 17 open reading frame 60	BC144272|C17orf60|284021|chromosome 17 open reading frame 60	AB542950|C17orf60|284021|chromosome 17 open reading frame 60	AB542951|C17orf60|284021|chromosome 17 open reading frame 60	BC053534|C17orf60|284021|chromosome 17 open reading frame 60
hg18_v1_chr1_+_53698070_53698167	0.133155	SOX2.p2	AK302085|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1	BC029566|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1
hg18_v1_chr19_-_54093749_54093807	0.133135	SOX2.p2	U82469|TULP2|7288|tubby like protein 2	BC026070|TULP2|7288|tubby like protein 2	NM_003323|TULP2|7288|tubby like protein 2
hg18_v1_chr11_-_8147111_8147168	0.132927	SOX2.p2	AM422214|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AY326435|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AK315379|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AL832601|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AK293933|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AK296505|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AY358475|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	BC022455|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AY326436|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	BX647514|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	NM_001135109|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	NM_024557|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)
hg18_v1_chr12_+_46802695_46802829	0.132788	SOX2.p2	NM_001166687|PFKM|5213|phosphofructokinase, muscle	NM_001166688|PFKM|5213|phosphofructokinase, muscle	Y00698|PFKM|5213|phosphofructokinase, muscle	BC000534|PFKM|5213|phosphofructokinase, muscle	BC012799|PFKM|5213|phosphofructokinase, muscle	BC013298|PFKM|5213|phosphofructokinase, muscle	BC007798|PFKM|5213|phosphofructokinase, muscle
hg18_v1_chr7_+_77005287_77005321	0.132465	SOX2.p2	AK303602|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12	NM_001131008|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12	NM_001131009|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12	AK296764|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12
hg18_v1_chr1_+_47572209_47572247	0.132459	SOX2.p2	AF259961|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic
hg18_v1_chr5_+_86599575_86599589	0.132278	SOX2.p2	
hg18_v1_chr4_+_113372287_113372780	0.132123	SOX2.p2	NM_001128426|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	NM_018569|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AK310787|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	BX647702|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AL136628|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	BC009485|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AK315299|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AM392774|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AM393046|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AM393154|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AM393604|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AM393708|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	EU831660|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	EU831743|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein
hg18_v1_chr1_+_227506751_227506751	0.132101	SOX2.p2	BC107681|SPHAR|10638|S-phase response (cyclin related)	NM_006542|SPHAR|10638|S-phase response (cyclin related)
hg18_v1_chr9_-_125070675_125070744	0.132039	SOX2.p2	AL136866|STRBP|55342|spermatid perinuclear RNA binding protein	NM_001171137|STRBP|55342|spermatid perinuclear RNA binding protein	BC108731|STRBP|55342|spermatid perinuclear RNA binding protein	AK027890|STRBP|55342|spermatid perinuclear RNA binding protein
hg18_v1_chr10_+_49562866_49562926	0.131863	SOX2.p2	BC034937|WDFY4|57705|WDFY family member 4
hg18_v1_chr2_-_160764819_160764847	0.131815	SOX2.p2	AM393800|ITGB6|3694|integrin, beta 6	M35198|ITGB6|3694|integrin, beta 6	NM_000888|ITGB6|3694|integrin, beta 6	BC121178|ITGB6|3694|integrin, beta 6	BC143656|ITGB6|3694|integrin, beta 6
hg18_v1_chr22_+_19239221_19239393	0.131534	SOX2.p2	BC017110|MED15|51586|mediator complex subunit 15
hg18_v1_chr1_-_175400441_175400456	0.131511	SOX2.p2	BC142697|ASTN1|460|astrotactin 1	AB006627|ASTN1|460|astrotactin 1	BC146795|ASTN1|460|astrotactin 1
hg18_v1_chr5_+_162862808_162862925	0.131421	SOX2.p2	DQ395260|MAT2B|27430|methionine adenosyltransferase II, beta	DQ413183|MAT2B|27430|methionine adenosyltransferase II, beta	NM_182796|MAT2B|27430|methionine adenosyltransferase II, beta	AJ243721|MAT2B|27430|methionine adenosyltransferase II, beta	AK291919|MAT2B|27430|methionine adenosyltransferase II, beta	BC005218|MAT2B|27430|methionine adenosyltransferase II, beta	CR622441|MAT2B|27430|methionine adenosyltransferase II, beta	AY358695|MAT2B|27430|methionine adenosyltransferase II, beta	CR596069|MAT2B|27430|methionine adenosyltransferase II, beta
hg18_v1_chr6_+_16251260_16251318	0.131376	SOX2.p2	AK026739|MYLIP|29116|myosin regulatory light chain interacting protein
hg18_v1_chr11_-_66201894_66201973	0.131346	SOX2.p2	BC003503|RBM4B|83759|RNA binding motif protein 4B	CR591230|RBM4B|83759|RNA binding motif protein 4B
hg18_v1_chr5_+_67622242_67622383	0.131204	SOX2.p2	AK223613|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	BC030815|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	NM_181504|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	U49349|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	AK126345|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
hg18_v1_chr11_-_129689524_129689559	0.131033	SOX2.p2	AF161548|ZBTB44|29068|zinc finger and BTB domain containing 44
hg18_v1_chr4_-_89963177_89963431	0.131012	SOX2.p2	AB020721|FAM13A|10144|family with sequence similarity 13, member A	AK027138|FAM13A|10144|family with sequence similarity 13, member A	BC033006|FAM13A|10144|family with sequence similarity 13, member A	BC086875|FAM13A|10144|family with sequence similarity 13, member A	BC058029|FAM13A|10144|family with sequence similarity 13, member A	AK296932|FAM13A|10144|family with sequence similarity 13, member A	NM_001015045|FAM13A|10144|family with sequence similarity 13, member A	AK091787|FAM13A|10144|family with sequence similarity 13, member A
hg18_v1_chrX_-_133758812_133758927	0.130848	SOX2.p2	BC019221|FAM122B|159090|family with sequence similarity 122B	NM_001166599|FAM122B|159090|family with sequence similarity 122B	AK124650|FAM122B|159090|family with sequence similarity 122B	AK297720|FAM122B|159090|family with sequence similarity 122B	NM_001166600|FAM122B|159090|family with sequence similarity 122B	NM_001170757|FAM122B|159090|family with sequence similarity 122B
hg18_v1_chr5_+_85949518_85949628	0.130704	SOX2.p2	BC001005|COX7C|1350|cytochrome c oxidase subunit VIIc	NM_001867|COX7C|1350|cytochrome c oxidase subunit VIIc	BC007498|COX7C|1350|cytochrome c oxidase subunit VIIc	X16560|COX7C|1350|cytochrome c oxidase subunit VIIc	BT007098|COX7C|1350|cytochrome c oxidase subunit VIIc	DQ891355|COX7C|1350|cytochrome c oxidase subunit VIIc	DQ894536|COX7C|1350|cytochrome c oxidase subunit VIIc
hg18_v1_chr3_+_197951121_197951124	0.130596	SOX2.p2	NM_002577|PAK2|5062|p21 protein (Cdc42/Rac)-activated kinase 2
hg18_v1_chr4_+_83570789_83570838	0.130335	SOX2.p2	AK022656|ENOPH1|58478|enolase-phosphatase 1	CR615673|ENOPH1|58478|enolase-phosphatase 1	BC065815|ENOPH1|58478|enolase-phosphatase 1	CR623426|ENOPH1|58478|enolase-phosphatase 1	CR593619|ENOPH1|58478|enolase-phosphatase 1	BC001317|ENOPH1|58478|enolase-phosphatase 1
hg18_v1_chr11_-_5232480_5232620	0.130177	SOX2.p2	AF110493|HBG2|3048|hemoglobin, gamma G	X55656|HBG2|3048|hemoglobin, gamma G	DQ892665|HBG1|3047|hemoglobin, gamma A	DQ892801|HBG1|3047|hemoglobin, gamma A	DQ895909|HBG2|3048|hemoglobin, gamma G	DQ896048|HBG1|3047|hemoglobin, gamma A	M15386|HBG2|3048|hemoglobin, gamma G	CR596479|HBG1|3047|hemoglobin, gamma A	CR602897|HBG2|3048|hemoglobin, gamma G	CR599317|HBG2|3048|hemoglobin, gamma G	CR594576|HBG2|3048|hemoglobin, gamma G	CR593826|HBG2|3048|hemoglobin, gamma G	CR594720|HBG1|3047|hemoglobin, gamma A	CR603041|HBG2|3048|hemoglobin, gamma G	CR609411|HBG1|3047|hemoglobin, gamma A	CR613701|HBG2|3048|hemoglobin, gamma G	CR620360|HBG1|3047|hemoglobin, gamma A	CR593382|HBG1|3047|hemoglobin, gamma A	CR607395|HBG2|3048|hemoglobin, gamma G	CR608786|HBG1|3047|hemoglobin, gamma A	CR610392|HBG2|3048|hemoglobin, gamma G	CR615907|HBG2|3048|hemoglobin, gamma G	CR619879|HBG1|3047|hemoglobin, gamma A	CR626466|HBG1|3047|hemoglobin, gamma A	CR595029|HBG2|3048|hemoglobin, gamma G	CR604256|HBG1|3047|hemoglobin, gamma A	CR593022|HBG2|3048|hemoglobin, gamma G	CR593470|HBG2|3048|hemoglobin, gamma G	CR595535|HBG2|3048|hemoglobin, gamma G	CR602719|HBG2|3048|hemoglobin, gamma G	CR604223|HBG2|3048|hemoglobin, gamma G	CR609361|HBG2|3048|hemoglobin, gamma G	CR613883|HBG2|3048|hemoglobin, gamma G	CR614139|HBG1|3047|hemoglobin, gamma A	CR619706|HBG1|3047|hemoglobin, gamma A	CR619938|HBG1|3047|hemoglobin, gamma A	CR622267|HBG1|3047|hemoglobin, gamma A	CR625875|HBG1|3047|hemoglobin, gamma A	CR626236|HBG1|3047|hemoglobin, gamma A	CR626417|HBG1|3047|hemoglobin, gamma A	CR621032|HBG1|3047|hemoglobin, gamma A	CR593357|HBG2|3048|hemoglobin, gamma G	BC130457|HBG2|3048|hemoglobin, gamma G	BC130459|HBG2|3048|hemoglobin, gamma G	AK290492|HBG2|3048|hemoglobin, gamma G	BC010914|HBG1|3047|hemoglobin, gamma A	BC020719|HBG1|3047|hemoglobin, gamma A	NM_000184|HBG2|3048|hemoglobin, gamma G	BC029387|HBG2|3048|hemoglobin, gamma G	CR608640|HBG1|3047|hemoglobin, gamma A
hg18_v1_chr10_+_35524060_35524123	0.130169	SOX2.p2	D14826|CREM|1390|cAMP responsive element modulator	NM_182717|CREM|1390|cAMP responsive element modulator	NM_182718|CREM|1390|cAMP responsive element modulator	NM_182719|CREM|1390|cAMP responsive element modulator	NM_182720|CREM|1390|cAMP responsive element modulator	AK290612|CREM|1390|cAMP responsive element modulator	CR601807|CREM|1390|cAMP responsive element modulator	AF069065|CREM|1390|cAMP responsive element modulator	U44836|CREM|1390|cAMP responsive element modulator
hg18_v1_chr10_+_17311242_17311281	0.13013	SOX2.p2	CR593122|VIM|7431|vimentin	CR593139|VIM|7431|vimentin	CR593157|VIM|7431|vimentin	CR595631|VIM|7431|vimentin	CR596714|VIM|7431|vimentin	CR597938|VIM|7431|vimentin	CR599707|VIM|7431|vimentin	CR601844|VIM|7431|vimentin	CR602002|VIM|7431|vimentin	CR602499|VIM|7431|vimentin	CR602711|VIM|7431|vimentin	CR604958|VIM|7431|vimentin	CR605908|VIM|7431|vimentin	CR608479|VIM|7431|vimentin	CR610054|VIM|7431|vimentin	CR611833|VIM|7431|vimentin	CR615569|VIM|7431|vimentin	CR617011|VIM|7431|vimentin	CR617845|VIM|7431|vimentin	CR618852|VIM|7431|vimentin	CR620637|VIM|7431|vimentin	CR620780|VIM|7431|vimentin	CR621379|VIM|7431|vimentin	CR624853|VIM|7431|vimentin	CR593764|VIM|7431|vimentin	CR595804|VIM|7431|vimentin	CR604328|VIM|7431|vimentin	CR604633|VIM|7431|vimentin	CR609435|VIM|7431|vimentin
hg18_v1_chr10_+_22645304_22645357	0.129901	SOX2.p2	NM_012071|COMMD3|23412|COMM domain containing 3	BX647275|COMMD3|23412|COMM domain containing 3	AF201948|COMMD3|23412|COMM domain containing 3	CR625344|COMMD3|23412|COMM domain containing 3	BC022898|COMMD3|23412|COMM domain containing 3	AF078848|COMMD3|23412|COMM domain containing 3	AK128789|COMMD3|23412|COMM domain containing 3	AK313235|COMMD3-BMI1|100532731|COMMD3-BMI1 read-through transcript	AY542159|COMMD3|23412|COMM domain containing 3	CR596018|COMMD3|23412|COMM domain containing 3	CR610659|COMMD3|23412|COMM domain containing 3	CR612205|COMMD3|23412|COMM domain containing 3
hg18_v1_chr14_-_57688560_57688659	0.129801	SOX2.p2	BC146861|C14orf37|145407|chromosome 14 open reading frame 37	BX161411|C14orf37|145407|chromosome 14 open reading frame 37	NM_001001872|C14orf37|145407|chromosome 14 open reading frame 37	AK292605|C14orf37|145407|chromosome 14 open reading frame 37	BX161448|C14orf37|145407|chromosome 14 open reading frame 37
hg18_v1_chr9_-_94206648_94206801	0.129763	SOX2.p2	AF086912|OGN|4969|osteoglycin	AF100758|OGN|4969|osteoglycin	CR614070|OGN|4969|osteoglycin	NM_014057|OGN|4969|osteoglycin	NM_033014|OGN|4969|osteoglycin	AK289628|OGN|4969|osteoglycin	AK295433|OGN|4969|osteoglycin
hg18_v1_chr3_-_153470022_153470049	0.129576	SOX2.p2	AK304857|LOC401093|401093|hypothetical LOC401093	AK316515|LOC401093|401093|hypothetical LOC401093
hg18_v1_chr15_+_43036194_43036206	0.129567	SOX2.p2	BC029537|C15orf43|145645|chromosome 15 open reading frame 43	NM_152448|C15orf43|145645|chromosome 15 open reading frame 43	DQ890983|C15orf43|145645|chromosome 15 open reading frame 43	DQ894158|C15orf43|145645|chromosome 15 open reading frame 43
hg18_v1_chr12_-_14858358_14858382	0.129517	SOX2.p2	BC132752|C12orf69|440087|chromosome 12 open reading frame 69	BC132754|C12orf69|440087|chromosome 12 open reading frame 69	AK092637|C12orf69|440087|chromosome 12 open reading frame 69	NM_001013698|C12orf69|440087|chromosome 12 open reading frame 69
hg18_v1_chr22_+_19601619_19601720	0.129466	SOX2.p2	AK292909|CRKL|1399|v-crk sarcoma virus CT10 oncogene homolog (avian)-like	NM_005207|CRKL|1399|v-crk sarcoma virus CT10 oncogene homolog (avian)-like	X59656|CRKL|1399|v-crk sarcoma virus CT10 oncogene homolog (avian)-like
hg18_v1_chr20_-_45360903_45361050	0.129434	SOX2.p2	BC030721|ZMYND8|23613|zinc finger, MYND-type containing 8
hg18_v1_chr19_-_54958326_54958354	0.129369	SOX2.p2	NM_021733|TSKS|60385|testis-specific serine kinase substrate	BC058862|TSKS|60385|testis-specific serine kinase substrate
hg18_v1_chr12_+_130004404_130004408	0.129107	SOX2.p2	BX649116|GPR133|283383|G protein-coupled receptor 133	NM_198827|GPR133|283383|G protein-coupled receptor 133
hg18_v1_chr9_-_116305273_116305315	0.128899	SOX2.p2	AL110228|DFNB31|25861|deafness, autosomal recessive 31	NM_001083885|DFNB31|25861|deafness, autosomal recessive 31
hg18_v1_chrX_+_109548940_109548940	0.128544	SOX2.p2	AB037739|RGAG1|57529|retrotransposon gag domain containing 1	AY121804|RGAG1|57529|retrotransposon gag domain containing 1	NM_020769|RGAG1|57529|retrotransposon gag domain containing 1
hg18_v1_chr8_-_74821636_74821789	0.128468	SOX2.p2	AK294466|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	CR627442|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	NM_001164380|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	NM_001164381|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	NM_001164382|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	NM_001164383|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	NM_001164385|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	NM_014393|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)
hg18_v1_chr22_-_48866484_48866484	0.128344	SOX2.p2	AK124264|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1	NM_015166|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1
hg18_v1_chrX_-_135790595_135790608	0.128304	SOX2.p2	NM_001164803|RBMX|27316|RNA binding motif protein, X-linked	NM_002139|RBMX|27316|RNA binding motif protein, X-linked
hg18_v1_chr16_+_24475129_24475130	0.128261	SOX2.p2	BC029649|RBBP6|5930|retinoblastoma binding protein 6
hg18_v1_chr6_+_35812836_35812836	0.128231	SOX2.p2	AK058119|C6orf81|221481|chromosome 6 open reading frame 81	BC033033|C6orf81|221481|chromosome 6 open reading frame 81	NM_145028|C6orf81|221481|chromosome 6 open reading frame 81
hg18_v1_chr12_+_54611212_54611349	0.127742	SOX2.p2	AK303320|DGKA|1606|diacylglycerol kinase, alpha 80kDa	AK307685|DGKA|1606|diacylglycerol kinase, alpha 80kDa	NM_001345|DGKA|1606|diacylglycerol kinase, alpha 80kDa	CR616473|DGKA|1606|diacylglycerol kinase, alpha 80kDa	AF064770|DGKA|1606|diacylglycerol kinase, alpha 80kDa	AF064771|DGKA|1606|diacylglycerol kinase, alpha 80kDa	AK310600|DGKA|1606|diacylglycerol kinase, alpha 80kDa
hg18_v1_chr3_+_184898234_184898398	0.127283	SOX2.p2	AB033023|YEATS2|55689|YEATS domain containing 2	BC150273|YEATS2|55689|YEATS domain containing 2	NM_018023|YEATS2|55689|YEATS domain containing 2
hg18_v1_chr3_+_197951203_197951242	0.12728	SOX2.p2	AK291339|PAK2|5062|p21 protein (Cdc42/Rac)-activated kinase 2
hg18_v1_chr5_-_180175146_180175151	0.127208	SOX2.p2	AK057194|MGAT1|4245|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase
hg18_v1_chrX_-_24575375_24575386	0.127116	SOX2.p2	AK315323|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	NM_001163265|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	NM_004845|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta
hg18_v1_chr3_+_70068440_70068563	0.126751	SOX2.p2	NM_000248|MITF|4286|microphthalmia-associated transcription factor	NM_001184968|MITF|4286|microphthalmia-associated transcription factor	NM_198158|MITF|4286|microphthalmia-associated transcription factor	NM_198178|MITF|4286|microphthalmia-associated transcription factor	Z29678|MITF|4286|microphthalmia-associated transcription factor	BC012503|MITF|4286|microphthalmia-associated transcription factor	BC065243|MITF|4286|microphthalmia-associated transcription factor	BC026961|MITF|4286|microphthalmia-associated transcription factor	GU355676|MITF|4286|microphthalmia-associated transcription factor
hg18_v1_chr1_+_87567136_87567158	0.126569	SOX2.p2	AK292578|LMO4|8543|LIM domain only 4
hg18_v1_chr19_+_63053031_63053218	0.126561	SOX2.p2	AK027616|ZNF587|84914|zinc finger protein 587	NM_032828|ZNF587|84914|zinc finger protein 587	BC126237|ZNF587|84914|zinc finger protein 587	BC126239|ZNF587|84914|zinc finger protein 587	BC144112|ZNF587|84914|zinc finger protein 587	BC144113|ZNF587|84914|zinc finger protein 587
hg18_v1_chrX_-_130251068_130251119	0.126489	SOX2.p2	NM_001170961|IGSF1|3547|immunoglobulin superfamily, member 1	NM_001170962|IGSF1|3547|immunoglobulin superfamily, member 1	NM_001555|IGSF1|3547|immunoglobulin superfamily, member 1	NM_205833|IGSF1|3547|immunoglobulin superfamily, member 1
hg18_v1_chr1_-_52293356_52293476	0.126452	SOX2.p2	BC008953|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	AK075409|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	BC001493|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	CR593611|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	CR612587|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	CR622088|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	BC008913|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	AY358982|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	AF131758|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	CR611104|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)
hg18_v1_chr14_+_22059212_22059254	0.126253	SOX2.p2	
hg18_v1_chr17_-_53849929_53849958	0.126207	SOX2.p2	NM_017763|RNF43|54894|ring finger protein 43	CR627423|RNF43|54894|ring finger protein 43
hg18_v1_chr1_+_159395912_159396026	0.126036	SOX2.p2	BC090946|USP21|27005|ubiquitin specific peptidase 21	AK292319|USP21|27005|ubiquitin specific peptidase 21	AK310326|USP21|27005|ubiquitin specific peptidase 21	AF233442|USP21|27005|ubiquitin specific peptidase 21	AF217979|USP21|27005|ubiquitin specific peptidase 21	AF177758|USP21|27005|ubiquitin specific peptidase 21
hg18_v1_chr15_-_57013058_57013090	0.125908	SOX2.p2	AK000867|SLTM|79811|SAFB-like, transcription modulator	AK055195|SLTM|79811|SAFB-like, transcription modulator	BC108656|SLTM|79811|SAFB-like, transcription modulator	AK291423|SLTM|79811|SAFB-like, transcription modulator	AK131242|SLTM|79811|SAFB-like, transcription modulator
hg18_v1_chr1_+_84402962_84402974	0.125907	SOX2.p2	BX647515|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	AB209189|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta
hg18_v1_chr15_-_23204887_23204952	0.125807	SOX2.p2	AB194232|UBE3A|7337|ubiquitin protein ligase E3A	NM_000462|UBE3A|7337|ubiquitin protein ligase E3A	X98031|UBE3A|7337|ubiquitin protein ligase E3A	AF002225|UBE3A|7337|ubiquitin protein ligase E3A
hg18_v1_chr9_+_122890394_122890425	0.125785	SOX2.p2	NM_007018|CEP110|11064|centrosomal protein 110kDa	BC137284|CEP110|11064|centrosomal protein 110kDa	BC137286|CEP110|11064|centrosomal protein 110kDa	AF513978|CEP110|11064|centrosomal protein 110kDa
hg18_v1_chrX_-_55074125_55074221	0.125229	SOX2.p2	CR620984|ALAS2|212|aminolevulinate, delta-, synthase 2	AK291589|ALAS2|212|aminolevulinate, delta-, synthase 2	X60364|ALAS2|212|aminolevulinate, delta-, synthase 2	AK313118|ALAS2|212|aminolevulinate, delta-, synthase 2	NM_000032|ALAS2|212|aminolevulinate, delta-, synthase 2	NM_001037967|ALAS2|212|aminolevulinate, delta-, synthase 2	NM_001037968|ALAS2|212|aminolevulinate, delta-, synthase 2
hg18_v1_chr8_+_145158432_145158594	0.125154	SOX2.p2	NM_001134374|SPATC1|375686|spermatogenesis and centriole associated 1	NM_198572|SPATC1|375686|spermatogenesis and centriole associated 1	BC050390|SPATC1|375686|spermatogenesis and centriole associated 1	AB092352|SPATC1|375686|spermatogenesis and centriole associated 1	AK301710|SPATC1|375686|spermatogenesis and centriole associated 1	BC053547|SPATC1|375686|spermatogenesis and centriole associated 1
hg18_v1_chr7_-_105106844_105106844	0.124983	SOX2.p2	AK300338|ATXN7L1|222255|ataxin 7-like 1	NM_138495|ATXN7L1|222255|ataxin 7-like 1
hg18_v1_chr6_-_31853027_31853086	0.124887	SOX2.p2	AK304058|C6orf27|80737|chromosome 6 open reading frame 27	NM_025258|C6orf27|80737|chromosome 6 open reading frame 27
hg18_v1_chr10_+_111755715_111755828	0.124653	SOX2.p2	NM_019903|ADD3|120|adducin 3 (gamma)	AB209810|ADD3|120|adducin 3 (gamma)	BC057285|ADD3|120|adducin 3 (gamma)
hg18_v1_chr3_+_14419066_14419080	0.123801	SOX2.p2	AK303649|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6
hg18_v1_chr19_+_44886785_44886981	0.123665	SOX2.p2	AF267852|LGALS14|56891|lectin, galactoside-binding, soluble, 14	AF367430|LGALS14|56891|lectin, galactoside-binding, soluble, 14	AF367431|LGALS14|56891|lectin, galactoside-binding, soluble, 14	AF367432|LGALS14|56891|lectin, galactoside-binding, soluble, 14	NM_020129|LGALS14|56891|lectin, galactoside-binding, soluble, 14	NM_203471|LGALS14|56891|lectin, galactoside-binding, soluble, 14	BC022257|LGALS14|56891|lectin, galactoside-binding, soluble, 14	AK312040|LGALS14|56891|lectin, galactoside-binding, soluble, 14	FJ613341|LGALS14|56891|lectin, galactoside-binding, soluble, 14	FJ613342|LGALS14|56891|lectin, galactoside-binding, soluble, 14
hg18_v1_chr4_+_78297356_78297415	0.123484	SOX2.p2	NM_004354|CCNG2|901|cyclin G2	AK292029|CCNG2|901|cyclin G2	BC032518|CCNG2|901|cyclin G2
hg18_v1_chr2_-_204108151_204108632	0.123239	SOX2.p2	AK096270|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1	AB053311|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1	AJ584699|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1	AY494951|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1	AY523977|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1	AY523978|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1	NM_203365|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1	NM_213589|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1
hg18_v1_chr6_+_14033402_14033442	0.123231	SOX2.p2	NM_001165033|RNF182|221687|ring finger protein 182	AK090576|RNF182|221687|ring finger protein 182
hg18_v1_chr14_+_87541220_87541286	0.12318	SOX2.p2	NM_003608|GPR65|8477|G protein-coupled receptor 65	AK313797|GPR65|8477|G protein-coupled receptor 65	BC035633|GPR65|8477|G protein-coupled receptor 65	BC071715|GPR65|8477|G protein-coupled receptor 65
hg18_v1_chr5_-_137882303_137882450	0.123113	SOX2.p2	CR622518|ETF1|2107|eukaryotic translation termination factor 1	BT007374|ETF1|2107|eukaryotic translation termination factor 1	DQ890706|ETF1|2107|eukaryotic translation termination factor 1	DQ893890|ETF1|2107|eukaryotic translation termination factor 1
hg18_v1_chr12_+_69046241_69046826	0.122966	SOX2.p2	CR613566|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	NM_014505|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	CR614941|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	AF160967|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	BC042446|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	BC050621|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	AF215891|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	AF207992|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4
hg18_v1_chr10_-_11693535_11693750	0.122871	SOX2.p2	AK292944|USP6NL|9712|USP6 N-terminal like	BC042943|USP6NL|9712|USP6 N-terminal like	D13644|USP6NL|9712|USP6 N-terminal like	BC010351|USP6NL|9712|USP6 N-terminal like	NM_014688|USP6NL|9712|USP6 N-terminal like
hg18_v1_chr1_+_243065215_243065449	0.12286	SOX2.p2	AK125259|FAM36A|116228|family with sequence similarity 36, member A	NM_198076|FAM36A|116228|family with sequence similarity 36, member A	CR592197|FAM36A|116228|family with sequence similarity 36, member A
hg18_v1_chr12_-_65359148_65359191	0.122756	SOX2.p2	AK095519|GRIP1|23426|glutamate receptor interacting protein 1	NM_001178074|GRIP1|23426|glutamate receptor interacting protein 1	NM_021150|GRIP1|23426|glutamate receptor interacting protein 1
hg18_v1_chr6_+_88111289_88111289	0.122725	SOX2.p2	NM_001010868|C6orf163|206412|chromosome 6 open reading frame 163
hg18_v1_chr6_-_139737477_139737477	0.122553	SOX2.p2	NM_006079|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
hg18_v1_chrX_+_117410693_117410738	0.122497	SOX2.p2	AL834210|WDR44|54521|WD repeat domain 44
hg18_v1_chr21_-_33107813_33107922	0.122252	SOX2.p2	BC069689|C21orf62|56245|chromosome 21 open reading frame 62	BC069709|C21orf62|56245|chromosome 21 open reading frame 62	BC069766|C21orf62|56245|chromosome 21 open reading frame 62	BC069779|C21orf62|56245|chromosome 21 open reading frame 62	AF231922|C21orf62|56245|chromosome 21 open reading frame 62	AK290983|C21orf62|56245|chromosome 21 open reading frame 62	DQ656042|C21orf62|56245|chromosome 21 open reading frame 62	NM_001162495|C21orf62|56245|chromosome 21 open reading frame 62	NM_001162496|C21orf62|56245|chromosome 21 open reading frame 62	NM_019596|C21orf62|56245|chromosome 21 open reading frame 62
hg18_v1_chr1_+_243065630_243065647	0.122196	SOX2.p2	
hg18_v1_chr6_+_57062918_57062926	0.122182	SOX2.p2	AK302577|ZNF451|26036|zinc finger protein 451
hg18_v1_chr4_+_25931745_25931815	0.122156	SOX2.p2	BC053568|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region	BC064976|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region
hg18_v1_chr19_-_40411418_40411471	0.122146	SOX2.p2	BC039080|FAM187B|148109|family with sequence similarity 187, member B	AK098526|FAM187B|148109|family with sequence similarity 187, member B	NM_152481|FAM187B|148109|family with sequence similarity 187, member B	BC117457|FAM187B|148109|family with sequence similarity 187, member B	BC117459|FAM187B|148109|family with sequence similarity 187, member B
hg18_v1_chrX_-_47374647_47374647	0.122115	SOX2.p2	NM_002621|CFP|5199|complement factor properdin
hg18_v1_chr22_-_17799215_17799280	0.122045	SOX2.p2	NM_003325|HIRA|7290|HIR histone cell cycle regulation defective homolog A (S. cerevisiae)	X75296|HIRA|7290|HIR histone cell cycle regulation defective homolog A (S. cerevisiae)	X89887|HIRA|7290|HIR histone cell cycle regulation defective homolog A (S. cerevisiae)	BC032721|HIRA|7290|HIR histone cell cycle regulation defective homolog A (S. cerevisiae)
hg18_v1_chr10_+_70150936_70151043	0.121847	SOX2.p2	AF465616|CCAR1|55749|cell division cycle and apoptosis regulator 1	AK023438|CCAR1|55749|cell division cycle and apoptosis regulator 1	NM_018237|CCAR1|55749|cell division cycle and apoptosis regulator 1	AK307550|CCAR1|55749|cell division cycle and apoptosis regulator 1	AK298004|CCAR1|55749|cell division cycle and apoptosis regulator 1	BC058846|CCAR1|55749|cell division cycle and apoptosis regulator 1	AK001701|CCAR1|55749|cell division cycle and apoptosis regulator 1	AY249140|CCAR1|55749|cell division cycle and apoptosis regulator 1	AK122871|CCAR1|55749|cell division cycle and apoptosis regulator 1	AK292649|CCAR1|55749|cell division cycle and apoptosis regulator 1	AK299307|CCAR1|55749|cell division cycle and apoptosis regulator 1	AK307704|CCAR1|55749|cell division cycle and apoptosis regulator 1	AK307671|CCAR1|55749|cell division cycle and apoptosis regulator 1	BX647943|CCAR1|55749|cell division cycle and apoptosis regulator 1	BC130626|CCAR1|55749|cell division cycle and apoptosis regulator 1	BC132725|CCAR1|55749|cell division cycle and apoptosis regulator 1	BC144118|CCAR1|55749|cell division cycle and apoptosis regulator 1	BC108682|CCAR1|55749|cell division cycle and apoptosis regulator 1
hg18_v1_chr18_-_3209846_3209875	0.121772	SOX2.p2	BC116183|MYOM1|8736|myomesin 1, 185kDa	BC116184|MYOM1|8736|myomesin 1, 185kDa
hg18_v1_chr13_+_94883853_94883858	0.121763	SOX2.p2	NM_001160100|CLDN10|9071|claudin 10	NM_182848|CLDN10|9071|claudin 10	AK055855|CLDN10|9071|claudin 10
hg18_v1_chr6_-_91063181_91063284	0.121629	SOX2.p2	AJ271878|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2	NM_021813|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2
hg18_v1_chr4_-_83569853_83570272	0.121586	SOX2.p2	BC007392|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR407623|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	DQ892871|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	DQ896119|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	BC071944|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	BC011714|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	BC018961|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like
hg18_v1_chr5_-_171643247_171643372	0.121394	SOX2.p2	BC019910|UBTD2|92181|ubiquitin domain containing 2	CR591327|UBTD2|92181|ubiquitin domain containing 2	AK313274|UBTD2|92181|ubiquitin domain containing 2
hg18_v1_chr14_-_68424653_68424732	0.121286	SOX2.p2	BX641076|ACTN1|87|actinin, alpha 1
hg18_v1_chr3_+_39424109_39424178	0.121273	SOX2.p2	CR605409|RPSA|3921|ribosomal protein SA	CR596726|RPSA|3921|ribosomal protein SA	CR615235|RPSA|3921|ribosomal protein SA	CR618689|RPSA|3921|ribosomal protein SA	BC071970|RPSA|3921|ribosomal protein SA	CR599703|RPSA|3921|ribosomal protein SA	CR620609|RPSA|3921|ribosomal protein SA	CR624266|RPSA|3921|ribosomal protein SA	J03799|RPSA|3921|ribosomal protein SA	NM_001012321|RPSA|3921|ribosomal protein SA	BC068062|RPSA|3921|ribosomal protein SA	BC008867|RPSA|3921|ribosomal protein SA	S37431|RPSA|3921|ribosomal protein SA	DQ891146|RPSA|3921|ribosomal protein SA	DQ894326|RPSA|3921|ribosomal protein SA	BT007219|RPSA|3921|ribosomal protein SA	X61156|RPSA|3921|ribosomal protein SA
hg18_v1_chr11_+_71387572_71387756	0.121215	SOX2.p2	CR605363|IL18BP|10068|interleukin 18 binding protein	NM_001039659|IL18BP|10068|interleukin 18 binding protein	NM_001039660|IL18BP|10068|interleukin 18 binding protein	AF215907|IL18BP|10068|interleukin 18 binding protein	BC044215|IL18BP|10068|interleukin 18 binding protein	AF110801|IL18BP|10068|interleukin 18 binding protein	NM_173042|IL18BP|10068|interleukin 18 binding protein
hg18_v1_chr7_+_141457977_141458039	0.121194	SOX2.p2	AK000645|LOC93432|93432|maltase-glucoamylase-like pseudogene	BC111973|LOC93432|93432|maltase-glucoamylase-like pseudogene	BC111975|LOC93432|93432|maltase-glucoamylase-like pseudogene
hg18_v1_chr1_+_24158898_24158969	0.121193	SOX2.p2	AF151042|PNRC2|55629|proline-rich nuclear receptor coactivator 2	BC068475|PNRC2|55629|proline-rich nuclear receptor coactivator 2	AK311305|PNRC2|55629|proline-rich nuclear receptor coactivator 2	BC001959|PNRC2|55629|proline-rich nuclear receptor coactivator 2	BC085018|PNRC2|55629|proline-rich nuclear receptor coactivator 2	BC078177|PNRC2|55629|proline-rich nuclear receptor coactivator 2	AF374386|PNRC2|55629|proline-rich nuclear receptor coactivator 2
hg18_v1_chr1_+_945331_945388	0.121174	SOX2.p2	AB191264|AGRN|375790|agrin	NM_198576|AGRN|375790|agrin
hg18_v1_chr5_-_150306298_150306335	0.121096	SOX2.p2	BC117490|ZNF300P1|134466|zinc finger protein 300 pseudogene 1	BC126474|ZNF300P1|134466|zinc finger protein 300 pseudogene 1	AK091436|ZNF300P1|134466|zinc finger protein 300 pseudogene 1	AK096536|ZNF300P1|134466|zinc finger protein 300 pseudogene 1	BC022559|ZNF300P1|134466|zinc finger protein 300 pseudogene 1
hg18_v1_chr3_-_14964861_14964934	0.12106	SOX2.p2	BC033386|LOC100505673|100505673|hypothetical LOC100505673
hg18_v1_chr17_+_53515725_53515844	0.120817	SOX2.p2	AK312125|DYNLL2|140735|dynein, light chain, LC8-type 2	NM_080677|DYNLL2|140735|dynein, light chain, LC8-type 2	BC010744|DYNLL2|140735|dynein, light chain, LC8-type 2
hg18_v1_chr12_+_51730101_51730233	0.120669	SOX2.p2	AF518729|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	CR936725|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	NM_170754|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	BX647126|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	AK131320|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	BC142668|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	BC142712|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)
hg18_v1_chrX_+_70420237_70420257	0.12058	SOX2.p2	CR605046|NONO|4841|non-POU domain containing, octamer-binding	CR614502|NONO|4841|non-POU domain containing, octamer-binding	BC028299|NONO|4841|non-POU domain containing, octamer-binding	BC012141|NONO|4841|non-POU domain containing, octamer-binding	BC025352|NONO|4841|non-POU domain containing, octamer-binding	BC025280|NONO|4841|non-POU domain containing, octamer-binding	BC002364|NONO|4841|non-POU domain containing, octamer-binding
hg18_v1_chr8_+_107529327_107529327	0.120492	SOX2.p2	AK296561|OXR1|55074|oxidation resistance 1	NM_001198532|OXR1|55074|oxidation resistance 1
hg18_v1_chr16_-_70763849_70763849	0.12038	SOX2.p2	AK122925|PMFBP1|83449|polyamine modulated factor 1 binding protein 1	NM_001160213|PMFBP1|83449|polyamine modulated factor 1 binding protein 1
hg18_v1_chr1_+_153366559_153366572	0.120362	SOX2.p2	AK057845|EFNA1|1942|ephrin-A1
hg18_v1_chr15_+_38923470_38923814	0.120334	SOX2.p2	AK314825|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1	AK300195|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1	NM_003710|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1	NM_181642|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1	BC018702|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1	AY358969|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1	AB000095|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1	AY296715|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1
hg18_v1_chr8_-_145809695_145809695	0.119859	SOX2.p2	AB051475|ARHGAP39|80728|Rho GTPase activating protein 39	NM_025251|ARHGAP39|80728|Rho GTPase activating protein 39
hg18_v1_chr10_-_5436781_5436796	0.119737	SOX2.p2	BC098247|TUBAL3|79861|tubulin, alpha-like 3	BC099716|TUBAL3|79861|tubulin, alpha-like 3	BC105634|TUBAL3|79861|tubulin, alpha-like 3	AK296616|TUBAL3|79861|tubulin, alpha-like 3	AK025318|TUBAL3|79861|tubulin, alpha-like 3	NM_001171864|TUBAL3|79861|tubulin, alpha-like 3	NM_024803|TUBAL3|79861|tubulin, alpha-like 3
hg18_v1_chr7_+_73136042_73136082	0.119715	SOX2.p2	AK290162|LIMK1|3984|LIM domain kinase 1
hg18_v1_chr7_+_20008870_20008879	0.119658	SOX2.p2	D28406|RPL21|6144|ribosomal protein L21
hg18_v1_chr2_+_48698440_48698518	0.11907	SOX2.p2	AK302220|GTF2A1L|11036|general transcription factor IIA, 1-like	NM_001193487|GTF2A1L|11036|general transcription factor IIA, 1-like	NM_006872|GTF2A1L|11036|general transcription factor IIA, 1-like	BC025991|GTF2A1L|11036|general transcription factor IIA, 1-like	AK223350|GTF2A1L|11036|general transcription factor IIA, 1-like	AF106857|GTF2A1L|11036|general transcription factor IIA, 1-like	DQ891566|GTF2A1L|11036|general transcription factor IIA, 1-like	DQ894756|GTF2A1L|11036|general transcription factor IIA, 1-like	BC064585|GTF2A1L|11036|general transcription factor IIA, 1-like
hg18_v1_chr12_-_52939584_52939599	0.118987	SOX2.p2	BC006821|CBX5|23468|chromobox homolog 5	NM_001127322|CBX5|23468|chromobox homolog 5
hg18_v1_chr7_-_130443379_130443425	0.118949	SOX2.p2	BC047367|FLJ43663|378805|hypothetical LOC378805	CR622681|FLJ43663|378805|hypothetical LOC378805
hg18_v1_chr8_-_30060029_30060200	0.118722	SOX2.p2	Z70223|TMEM66|51669|transmembrane protein 66	CR625035|TMEM66|51669|transmembrane protein 66	CR604656|TMEM66|51669|transmembrane protein 66	CR592958|TMEM66|51669|transmembrane protein 66	BC015012|TMEM66|51669|transmembrane protein 66	CR609979|TMEM66|51669|transmembrane protein 66	CR610452|TMEM66|51669|transmembrane protein 66	CR603787|TMEM66|51669|transmembrane protein 66	AF078855|TMEM66|51669|transmembrane protein 66	CR607306|TMEM66|51669|transmembrane protein 66	CR622883|TMEM66|51669|transmembrane protein 66	CR604748|TMEM66|51669|transmembrane protein 66	CR612155|TMEM66|51669|transmembrane protein 66	CR615477|TMEM66|51669|transmembrane protein 66	CR596584|TMEM66|51669|transmembrane protein 66	CR603460|TMEM66|51669|transmembrane protein 66	CR622782|TMEM66|51669|transmembrane protein 66	CR616524|TMEM66|51669|transmembrane protein 66	CR592722|TMEM66|51669|transmembrane protein 66	AB028926|TMEM66|51669|transmembrane protein 66	CR613232|TMEM66|51669|transmembrane protein 66	AK295360|TMEM66|51669|transmembrane protein 66	AK075340|TMEM66|51669|transmembrane protein 66	CR605556|TMEM66|51669|transmembrane protein 66	CR609363|TMEM66|51669|transmembrane protein 66	CR613264|TMEM66|51669|transmembrane protein 66	CR622956|TMEM66|51669|transmembrane protein 66	AK314659|TMEM66|51669|transmembrane protein 66	CR608346|TMEM66|51669|transmembrane protein 66	AK025927|TMEM66|51669|transmembrane protein 66	AY359104|TMEM66|51669|transmembrane protein 66	NM_016127|TMEM66|51669|transmembrane protein 66	AK094386|TMEM66|51669|transmembrane protein 66
hg18_v1_chr20_+_30831298_30831318	0.118692	SOX2.p2	AF176228|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta	NM_175850|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta
hg18_v1_chr1_-_102235377_102235380	0.118605	SOX2.p2	NM_058170|OLFM3|118427|olfactomedin 3
hg18_v1_chr20_+_58064360_58064420	0.118413	SOX2.p2	AK091179|C20orf197|284756|chromosome 20 open reading frame 197	NM_173644|C20orf197|284756|chromosome 20 open reading frame 197
hg18_v1_chr1_+_26389638_26389705	0.118327	SOX2.p2	BC144663|CATSPER4|378807|cation channel, sperm associated 4	BC128138|CATSPER4|378807|cation channel, sperm associated 4	BC128139|CATSPER4|378807|cation channel, sperm associated 4	NM_198137|CATSPER4|378807|cation channel, sperm associated 4
hg18_v1_chr2_+_101235782_101235867	0.118324	SOX2.p2	AF103798|C2orf29|55571|chromosome 2 open reading frame 29	BC064421|C2orf29|55571|chromosome 2 open reading frame 29	BC018664|C2orf29|55571|chromosome 2 open reading frame 29
hg18_v1_chr19_-_49597594_49597623	0.118012	SOX2.p2	AL833447|ZNF285|26974|zinc finger protein 285	AK302594|ZFP112|7771|zinc finger protein 112 homolog (mouse)	NM_152354|ZNF285|26974|zinc finger protein 285
hg18_v1_chr1_-_172258129_172258147	0.117979	SOX2.p2	
hg18_v1_chr11_+_113436438_113436497	0.117831	SOX2.p2	BC026902|ZBTB16|7704|zinc finger and BTB domain containing 16	NM_001018011|ZBTB16|7704|zinc finger and BTB domain containing 16
hg18_v1_chr16_+_66464492_66464499	0.117617	SOX2.p2	NM_014329|EDC4|23644|enhancer of mRNA decapping 4
hg18_v1_chr2_-_20413838_20413962	0.117555	SOX2.p2	AK304198|PUM2|23369|pumilio homolog 2 (Drosophila)	AK093847|PUM2|23369|pumilio homolog 2 (Drosophila)
hg18_v1_chr6_+_88026338_88026428	0.117478	SOX2.p2	BC063594|ZNF292|23036|zinc finger protein 292	AY684300|ZNF292|23036|zinc finger protein 292
hg18_v1_chrX_-_13744933_13745092	0.117349	SOX2.p2	AM392527|GPM6B|2824|glycoprotein M6B	AM392754|GPM6B|2824|glycoprotein M6B	AM392867|GPM6B|2824|glycoprotein M6B	AM392943|GPM6B|2824|glycoprotein M6B	AM392957|GPM6B|2824|glycoprotein M6B	AM392968|GPM6B|2824|glycoprotein M6B	AM392974|GPM6B|2824|glycoprotein M6B	AM393048|GPM6B|2824|glycoprotein M6B	AM393215|GPM6B|2824|glycoprotein M6B	AM393570|GPM6B|2824|glycoprotein M6B	AM393576|GPM6B|2824|glycoprotein M6B	AM393741|GPM6B|2824|glycoprotein M6B	AM393770|GPM6B|2824|glycoprotein M6B	AM393783|GPM6B|2824|glycoprotein M6B	AM393822|GPM6B|2824|glycoprotein M6B	DQ891541|GPM6B|2824|glycoprotein M6B	DQ894729|GPM6B|2824|glycoprotein M6B	EU832134|GPM6B|2824|glycoprotein M6B	EU832227|GPM6B|2824|glycoprotein M6B	BC008151|GPM6B|2824|glycoprotein M6B
hg18_v1_chr9_-_14769530_14769530	0.117274	SOX2.p2	BC031064|FREM1|158326|FRAS1 related extracellular matrix 1	NM_001177704|FREM1|158326|FRAS1 related extracellular matrix 1
hg18_v1_chr12_-_23995220_23995237	0.117195	SOX2.p2	BC014929|SOX5|6660|SRY (sex determining region Y)-box 5	AK303970|SOX5|6660|SRY (sex determining region Y)-box 5
hg18_v1_chr2_+_218790364_218790438	0.116979	SOX2.p2	AF006085|ARPC2|10109|actin related protein 2/3 complex, subunit 2, 34kDa	NM_005731|ARPC2|10109|actin related protein 2/3 complex, subunit 2, 34kDa	BT006898|ARPC2|10109|actin related protein 2/3 complex, subunit 2, 34kDa
hg18_v1_chr2_-_2313894_2314051	0.116908	SOX2.p2	BC137272|MYT1L|23040|myelin transcription factor 1-like	BC137273|MYT1L|23040|myelin transcription factor 1-like	AF036943|MYT1L|23040|myelin transcription factor 1-like	AB029029|MYT1L|23040|myelin transcription factor 1-like	BC150281|MYT1L|23040|myelin transcription factor 1-like	NM_015025|MYT1L|23040|myelin transcription factor 1-like
hg18_v1_chrX_+_49213543_49213553	0.116854	SOX2.p2	CR542236|GAGE4|2576|G antigen 4	DQ891160|GAGE5|2577|G antigen 5	NM_001098405|GAGE12F|100008586|G antigen 12F	U19144|GAGE3|2575|G antigen 3	BC069086|GAGE7|2579|G antigen 7
hg18_v1_chr12_+_49185035_49185298	0.116551	SOX2.p2	BC075027|DIP2B|57609|DIP2 disco-interacting protein 2 homolog B (Drosophila)
hg18_v1_chr2_+_113452066_113452079	0.116358	SOX2.p2	AY359111|IL1F9|56300|interleukin 1 family, member 9	AF200492|IL1F9|56300|interleukin 1 family, member 9	NM_019618|IL1F9|56300|interleukin 1 family, member 9	AF206696|IL1F9|56300|interleukin 1 family, member 9
hg18_v1_chr15_+_57067141_57067157	0.116282	SOX2.p2	BC060862|RNF111|54778|ring finger protein 111	BX538130|RNF111|54778|ring finger protein 111	NM_017610|RNF111|54778|ring finger protein 111
hg18_v1_chr7_+_73136085_73136098	0.11611	SOX2.p2	D26309|LIMK1|3984|LIM domain kinase 1	NM_002314|LIMK1|3984|LIM domain kinase 1
hg18_v1_chr2_+_161980865_161980990	0.116002	SOX2.p2	NM_006593|TBR1|10716|T-box, brain, 1	BC104844|TBR1|10716|T-box, brain, 1	BC113418|TBR1|10716|T-box, brain, 1
hg18_v1_chr5_+_76470829_76470856	0.115958	SOX2.p2	
hg18_v1_chr4_+_53938586_53938656	0.115914	SOX2.p2	BC017724|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	AL136910|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	AY366510|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg18_v1_chr7_+_23112441_23112441	0.115662	SOX2.p2	NM_018846|KLHL7|55975|kelch-like 7 (Drosophila)
hg18_v1_chr1_-_210070736_210070771	0.115523	SOX2.p2	D86960|LPGAT1|9926|lysophosphatidylglycerol acyltransferase 1	NM_014873|LPGAT1|9926|lysophosphatidylglycerol acyltransferase 1
hg18_v1_chr12_+_54106304_54106304	0.115427	SOX2.p2	NM_001005183|OR6C76|390326|olfactory receptor, family 6, subfamily C, member 76
hg18_v1_chr3_-_156904690_156904690	0.115146	SOX2.p2	BC113950|PLCH1|23007|phospholipase C, eta 1	NM_014996|PLCH1|23007|phospholipase C, eta 1
hg18_v1_chr12_+_53177758_53177786	0.115095	SOX2.p2	NM_005337|NCKAP1L|3071|NCK-associated protein 1-like
hg18_v1_chr5_+_148711419_148711529	0.114974	SOX2.p2	AK091237|GRPEL2|134266|GrpE-like 2, mitochondrial (E. coli)
hg18_v1_chr11_-_10630408_10630498	0.114857	SOX2.p2	AK300358|MRVI1|10335|murine retrovirus integration site 1 homolog	NM_001098579|MRVI1|10335|murine retrovirus integration site 1 homolog	AF081249|MRVI1|10335|murine retrovirus integration site 1 homolog
hg18_v1_chr6_+_89847183_89847332	0.114804	SOX2.p2	AK312665|PNRC1|10957|proline-rich nuclear receptor coactivator 1	AK130046|PNRC1|10957|proline-rich nuclear receptor coactivator 1	CR608318|PNRC1|10957|proline-rich nuclear receptor coactivator 1	CR593282|PNRC1|10957|proline-rich nuclear receptor coactivator 1	CR624105|PNRC1|10957|proline-rich nuclear receptor coactivator 1	CR590801|PNRC1|10957|proline-rich nuclear receptor coactivator 1	CR605107|PNRC1|10957|proline-rich nuclear receptor coactivator 1	CR603217|PNRC1|10957|proline-rich nuclear receptor coactivator 1	U03105|PNRC1|10957|proline-rich nuclear receptor coactivator 1	CR617909|PNRC1|10957|proline-rich nuclear receptor coactivator 1	CR595339|PNRC1|10957|proline-rich nuclear receptor coactivator 1	CR602604|PNRC1|10957|proline-rich nuclear receptor coactivator 1	BC018112|PNRC1|10957|proline-rich nuclear receptor coactivator 1	AY303779|PNRC1|10957|proline-rich nuclear receptor coactivator 1
hg18_v1_chr12_-_52939636_52939640	0.114662	SOX2.p2	NM_001127321|CBX5|23468|chromobox homolog 5
hg18_v1_chr11_-_70350292_70350362	0.1146	SOX2.p2	AB208026|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2
hg18_v1_chr12_-_38123027_38123505	0.114395	SOX2.p2	AB051495|KIF21A|55605|kinesin family member 21A	AM177179|KIF21A|55605|kinesin family member 21A	AY368076|KIF21A|55605|kinesin family member 21A	BC136414|KIF21A|55605|kinesin family member 21A	CR624607|KIF21A|55605|kinesin family member 21A	CR624190|KIF21A|55605|kinesin family member 21A	BC041430|KIF21A|55605|kinesin family member 21A	AF155117|KIF21A|55605|kinesin family member 21A	AF450487|KIF21A|55605|kinesin family member 21A	AK000059|KIF21A|55605|kinesin family member 21A	AB290166|KIF21A|55605|kinesin family member 21A	NM_001173463|KIF21A|55605|kinesin family member 21A	NM_001173464|KIF21A|55605|kinesin family member 21A	NM_001173465|KIF21A|55605|kinesin family member 21A	NM_017641|KIF21A|55605|kinesin family member 21A
hg18_v1_chr7_+_55947824_55947861	0.114121	SOX2.p2	AK097282|ZNF713|349075|zinc finger protein 713	NM_182633|ZNF713|349075|zinc finger protein 713
hg18_v1_chr19_-_47261761_47261796	0.114029	SOX2.p2	S40369|GRIK5|2901|glutamate receptor, ionotropic, kainate 5	AJ249209|GRIK5|2901|glutamate receptor, ionotropic, kainate 5	BC131717|GRIK5|2901|glutamate receptor, ionotropic, kainate 5	NM_002088|GRIK5|2901|glutamate receptor, ionotropic, kainate 5
hg18_v1_chr7_-_92615593_92615620	0.113877	SOX2.p2	AF474973|SAMD9L|219285|sterile alpha motif domain containing 9-like	AY195582|SAMD9L|219285|sterile alpha motif domain containing 9-like	AY195583|SAMD9L|219285|sterile alpha motif domain containing 9-like	AY195584|SAMD9L|219285|sterile alpha motif domain containing 9-like	AY195585|SAMD9L|219285|sterile alpha motif domain containing 9-like	AY195586|SAMD9L|219285|sterile alpha motif domain containing 9-like	AY195587|SAMD9L|219285|sterile alpha motif domain containing 9-like	DQ068177|SAMD9L|219285|sterile alpha motif domain containing 9-like	AB095926|SAMD9L|219285|sterile alpha motif domain containing 9-like	NM_152703|SAMD9L|219285|sterile alpha motif domain containing 9-like
hg18_v1_chr1_-_199742841_199742863	0.113822	SOX2.p2	CR619913|CSRP1|1465|cysteine and glycine-rich protein 1	BC007492|CSRP1|1465|cysteine and glycine-rich protein 1	CR593715|CSRP1|1465|cysteine and glycine-rich protein 1	CR603852|CSRP1|1465|cysteine and glycine-rich protein 1	CR613321|CSRP1|1465|cysteine and glycine-rich protein 1	CR601068|CSRP1|1465|cysteine and glycine-rich protein 1	CR615193|CSRP1|1465|cysteine and glycine-rich protein 1	CR621634|CSRP1|1465|cysteine and glycine-rich protein 1	CR625414|CSRP1|1465|cysteine and glycine-rich protein 1	M33146|CSRP1|1465|cysteine and glycine-rich protein 1	CR593927|CSRP1|1465|cysteine and glycine-rich protein 1	CR606741|CSRP1|1465|cysteine and glycine-rich protein 1	BC032493|CSRP1|1465|cysteine and glycine-rich protein 1	CR595754|CSRP1|1465|cysteine and glycine-rich protein 1	CR610287|CSRP1|1465|cysteine and glycine-rich protein 1	CR623326|CSRP1|1465|cysteine and glycine-rich protein 1
hg18_v1_chr1_-_198643885_198643899	0.113681	SOX2.p2	AK021707|ZNF281|23528|zinc finger protein 281
hg18_v1_chr11_+_117680504_117680877	0.113547	SOX2.p2	NM_000733|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)	CR591071|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)	AK301255|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)	AK311641|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)	AK292612|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)	CR609568|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)	BC049847|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)	X03884|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)	CR610563|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)
hg18_v1_chr13_-_107317460_107317460	0.113523	SOX2.p2	NM_001080396|FAM155A|728215|family with sequence similarity 155, member A
hg18_v1_chr4_+_53938579_53938585	0.113413	SOX2.p2	BC110383|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg18_v1_chr6_-_108689000_108689156	0.113264	SOX2.p2	NM_003795|SNX3|8724|sorting nexin 3	NM_152827|SNX3|8724|sorting nexin 3
hg18_v1_chr11_-_27637771_27637771	0.113188	SOX2.p2	EF689009|BDNF|627|brain-derived neurotrophic factor	EF689010|BDNF|627|brain-derived neurotrophic factor	NM_001143816|BDNF|627|brain-derived neurotrophic factor	NM_170735|BDNF|627|brain-derived neurotrophic factor
hg18_v1_chr5_+_40877053_40877346	0.113155	SOX2.p2	AF356193|CARD6|84674|caspase recruitment domain family, member 6	AY196783|CARD6|84674|caspase recruitment domain family, member 6	NM_032587|CARD6|84674|caspase recruitment domain family, member 6	BC093825|CARD6|84674|caspase recruitment domain family, member 6	AK304349|CARD6|84674|caspase recruitment domain family, member 6	AB209844|CARD6|84674|caspase recruitment domain family, member 6
hg18_v1_chr5_+_140583098_140583262	0.113054	SOX2.p2	AK301346|PCDHB14|56122|protocadherin beta 14	AK298296|PCDHB14|56122|protocadherin beta 14	AK074555|PCDHB14|56122|protocadherin beta 14	AF152493|PCDHB14|56122|protocadherin beta 14	AF217744|PCDHB14|56122|protocadherin beta 14	BC099728|PCDHB14|56122|protocadherin beta 14	NM_018934|PCDHB14|56122|protocadherin beta 14	BC098144|PCDHB14|56122|protocadherin beta 14
hg18_v1_chr12_-_101115677_101115743	0.112902	SOX2.p2	DQ892335|PMCH|5367|pro-melanin-concentrating hormone	DQ895540|PMCH|5367|pro-melanin-concentrating hormone	M57703|PMCH|5367|pro-melanin-concentrating hormone	BC018048|PMCH|5367|pro-melanin-concentrating hormone	NM_002674|PMCH|5367|pro-melanin-concentrating hormone
hg18_v1_chr12_+_92487728_92487728	0.112789	SOX2.p2	NM_003877|SOCS2|8835|suppressor of cytokine signaling 2
hg18_v1_chr11_-_14342627_14342627	0.112673	SOX2.p2	AK300103|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2	NM_001177314|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2
hg18_v1_chr12_+_9033403_9033498	0.112642	SOX2.p2	AK316337|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1	BC012621|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1	AK301367|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1	AF081675|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1	AF097358|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1	NM_005810|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1	AF034952|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1	DQ892820|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1	DQ896066|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1
hg18_v1_chr12_-_46405477_46405621	0.112592	SOX2.p2	CR606110|ENDOU|8909|endonuclease, polyU-specific	AK314688|ENDOU|8909|endonuclease, polyU-specific	BC069715|ENDOU|8909|endonuclease, polyU-specific	BC069698|ENDOU|8909|endonuclease, polyU-specific	BC074763|ENDOU|8909|endonuclease, polyU-specific	AK300169|ENDOU|8909|endonuclease, polyU-specific	AK075446|ENDOU|8909|endonuclease, polyU-specific	BC111782|ENDOU|8909|endonuclease, polyU-specific	M32402|ENDOU|8909|endonuclease, polyU-specific	M36109|ENDOU|8909|endonuclease, polyU-specific	NM_001172439|ENDOU|8909|endonuclease, polyU-specific	NM_001172440|ENDOU|8909|endonuclease, polyU-specific	NM_006025|ENDOU|8909|endonuclease, polyU-specific
hg18_v1_chr2_-_207291364_207291364	0.112539	SOX2.p2	DQ516347|DYTN|391475|dystrotelin	NM_001093730|DYTN|391475|dystrotelin
hg18_v1_chr7_+_150319076_150319124	0.112451	SOX2.p2	NM_000603|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	BC063294|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	AK300390|NOS3|4846|nitric oxide synthase 3 (endothelial cell)
hg18_v1_chr7_-_44834702_44834741	0.112422	SOX2.p2	CR615278|H2AFV|94239|H2A histone family, member V
hg18_v1_chr1_+_243065537_243065589	0.112404	SOX2.p2	AK130498|FAM36A|116228|family with sequence similarity 36, member A	BC062419|FAM36A|116228|family with sequence similarity 36, member A	BC018519|FAM36A|116228|family with sequence similarity 36, member A
hg18_v1_chr6_+_37511383_37511447	0.112344	SOX2.p2	
hg18_v1_chr1_+_209586328_209586328	0.112325	SOX2.p2	BC029600|TRAF5|7188|TNF receptor-associated factor 5	NM_145759|TRAF5|7188|TNF receptor-associated factor 5
hg18_v1_chr1_-_25164061_25164198	0.112246	SOX2.p2	BC013362|RUNX3|864|runt-related transcription factor 3	AK310945|RUNX3|864|runt-related transcription factor 3	NM_001031680|RUNX3|864|runt-related transcription factor 3	AF022726|RUNX3|864|runt-related transcription factor 3
hg18_v1_chr1_+_184532027_184532033	0.112143	SOX2.p2	NM_001127708|PRG4|10216|proteoglycan 4	NM_001127709|PRG4|10216|proteoglycan 4	NM_001127710|PRG4|10216|proteoglycan 4	NM_005807|PRG4|10216|proteoglycan 4	AK301343|PRG4|10216|proteoglycan 4	AK057197|PRG4|10216|proteoglycan 4	AK297718|PRG4|10216|proteoglycan 4	AK301487|PRG4|10216|proteoglycan 4	AK308235|PRG4|10216|proteoglycan 4
hg18_v1_chr19_-_14030970_14030970	0.112119	SOX2.p2	NM_001145028|PALM3|342979|paralemmin 3
hg18_v1_chr2_-_160180197_160180323	0.112071	SOX2.p2	AK127551|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B	BC107570|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B
hg18_v1_chr8_-_102872354_102872364	0.112013	SOX2.p2	AB209015|NCALD|83988|neurocalcin delta	AL136612|NCALD|83988|neurocalcin delta
hg18_v1_chr9_+_132700462_132700515	0.111947	SOX2.p2	M30833|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase	X16416|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase
hg18_v1_chr2_-_128285136_128285211	0.111694	SOX2.p2	BC108671|WDR33|55339|WD repeat domain 33	AB044749|WDR33|55339|WD repeat domain 33	AK002156|WDR33|55339|WD repeat domain 33	BC013990|WDR33|55339|WD repeat domain 33	BC068484|WDR33|55339|WD repeat domain 33	CR591938|WDR33|55339|WD repeat domain 33	AK223319|WDR33|55339|WD repeat domain 33
hg18_v1_chr1_-_23730298_23730299	0.111441	SOX2.p2	L22846|E2F2|1870|E2F transcription factor 2	NM_004091|E2F2|1870|E2F transcription factor 2
hg18_v1_chr14_-_87529600_87529659	0.111429	SOX2.p2	AK302956|GALC|2581|galactosylceramidase	NM_000153|GALC|2581|galactosylceramidase	NM_001037525|GALC|2581|galactosylceramidase
hg18_v1_chr12_-_122322117_122322775	0.11137	SOX2.p2	DQ891281|CDK2AP1|8099|cyclin-dependent kinase 2 associated protein 1	DQ894468|CDK2AP1|8099|cyclin-dependent kinase 2 associated protein 1	BC034717|CDK2AP1|8099|cyclin-dependent kinase 2 associated protein 1	AB006077|CDK2AP1|8099|cyclin-dependent kinase 2 associated protein 1	CR604217|CDK2AP1|8099|cyclin-dependent kinase 2 associated protein 1	CR598800|CDK2AP1|8099|cyclin-dependent kinase 2 associated protein 1	AF006484|CDK2AP1|8099|cyclin-dependent kinase 2 associated protein 1	NM_004642|CDK2AP1|8099|cyclin-dependent kinase 2 associated protein 1
hg18_v1_chr6_+_64403631_64403667	0.111359	SOX2.p2	AK055678|PHF3|23469|PHD finger protein 3
hg18_v1_chr1_+_198449278_198449278	0.111235	SOX2.p2	NM_001105517|FAM58B|339521|family with sequence similarity 58, member B
hg18_v1_chr11_+_120478584_120478584	0.111133	SOX2.p2	NM_005422|TECTA|7007|tectorin alpha
hg18_v1_chr12_+_9713472_9713597	0.111095	SOX2.p2	BC063128|CLEC2D|29121|C-type lectin domain family 2, member D	NM_001197318|CLEC2D|29121|C-type lectin domain family 2, member D	NM_013269|CLEC2D|29121|C-type lectin domain family 2, member D	AK310150|CLEC2D|29121|C-type lectin domain family 2, member D	NM_001004419|CLEC2D|29121|C-type lectin domain family 2, member D	AK310554|CLEC2D|29121|C-type lectin domain family 2, member D	AK313554|CLEC2D|29121|C-type lectin domain family 2, member D	BC019883|CLEC2D|29121|C-type lectin domain family 2, member D	AF133299|CLEC2D|29121|C-type lectin domain family 2, member D	AF285087|CLEC2D|29121|C-type lectin domain family 2, member D	FN813349|CLEC2D|29121|C-type lectin domain family 2, member D	FN813350|CLEC2D|29121|C-type lectin domain family 2, member D	FN813351|CLEC2D|29121|C-type lectin domain family 2, member D	NM_001197317|CLEC2D|29121|C-type lectin domain family 2, member D	NM_001197319|CLEC2D|29121|C-type lectin domain family 2, member D
hg18_v1_chr1_-_151549790_151549817	0.111091	SOX2.p2	BC128114|PGLYRP3|114771|peptidoglycan recognition protein 3	BC128115|PGLYRP3|114771|peptidoglycan recognition protein 3	BC069741|PGLYRP3|114771|peptidoglycan recognition protein 3	BC069798|PGLYRP3|114771|peptidoglycan recognition protein 3	BC069801|PGLYRP3|114771|peptidoglycan recognition protein 3	AY035376|PGLYRP3|114771|peptidoglycan recognition protein 3	NM_052891|PGLYRP3|114771|peptidoglycan recognition protein 3
hg18_v1_chr14_-_104333123_104333130	0.110999	SOX2.p2	NM_001014431|AKT1|207|v-akt murine thymoma viral oncogene homolog 1	NM_001014432|AKT1|207|v-akt murine thymoma viral oncogene homolog 1
hg18_v1_chr13_+_107753764_107753872	0.110948	SOX2.p2	
hg18_v1_chr10_+_86121526_86121671	0.110804	SOX2.p2	AB032954|FAM190B|54462|family with sequence similarity 190, member B
hg18_v1_chr7_-_150411504_150411571	0.110681	SOX2.p2	AY037155|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1	BC000936|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1	NM_001136044|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1
hg18_v1_chr7_+_143437539_143437608	0.110657	SOX2.p2	BC136742|OR2A2|442361|olfactory receptor, family 2, subfamily A, member 2	NM_001005480|OR2A2|442361|olfactory receptor, family 2, subfamily A, member 2
hg18_v1_chr6_-_76259976_76260217	0.110633	SOX2.p2	AK290232|FILIP1|27145|filamin A interacting protein 1	BC136443|FILIP1|27145|filamin A interacting protein 1	BC136444|FILIP1|27145|filamin A interacting protein 1	AL832009|FILIP1|27145|filamin A interacting protein 1	AK097021|FILIP1|27145|filamin A interacting protein 1	BX647178|FILIP1|27145|filamin A interacting protein 1	NM_015687|FILIP1|27145|filamin A interacting protein 1
hg18_v1_chr5_+_137231458_137231472	0.110594	SOX2.p2	AF133820|MYOT|9499|myotilin	AK300076|MYOT|9499|myotilin	AK307620|MYOT|9499|myotilin	AK312733|MYOT|9499|myotilin	BC005376|MYOT|9499|myotilin	AF144477|MYOT|9499|myotilin
hg18_v1_chr3_-_10124763_10124914	0.110426	SOX2.p2	AY248899|C3orf24|115795|chromosome 3 open reading frame 24	AF230334|C3orf24|115795|chromosome 3 open reading frame 24	BC028122|C3orf24|115795|chromosome 3 open reading frame 24	NM_001164839|C3orf24|115795|chromosome 3 open reading frame 24	NM_173472|C3orf24|115795|chromosome 3 open reading frame 24
hg18_v1_chr11_-_46572073_46572149	0.110285	SOX2.p2	AL834190|AMBRA1|55626|autophagy/beclin-1 regulator 1	AK057896|AMBRA1|55626|autophagy/beclin-1 regulator 1	AK000301|AMBRA1|55626|autophagy/beclin-1 regulator 1	AB051523|AMBRA1|55626|autophagy/beclin-1 regulator 1
hg18_v1_chr4_+_57468847_57468993	0.110232	SOX2.p2	BC038985|REST|5978|RE1-silencing transcription factor	U13879|REST|5978|RE1-silencing transcription factor
hg18_v1_chrX_+_149902415_149902515	0.110104	SOX2.p2	BX537505|HMGB3|3149|high-mobility group box 3	NM_005342|HMGB3|3149|high-mobility group box 3	Y10043|HMGB3|3149|high-mobility group box 3	BC070482|HMGB3|3149|high-mobility group box 3
hg18_v1_chr16_-_4836198_4836211	0.110048	SOX2.p2	BC003693|GLYR1|84656|glyoxylate reductase 1 homolog (Arabidopsis)
hg18_v1_chr8_-_38444675_38444848	0.109955	SOX2.p2	X51803|FGFR1|2260|fibroblast growth factor receptor 1	X57119|FGFR1|2260|fibroblast growth factor receptor 1	X57120|FGFR1|2260|fibroblast growth factor receptor 1	X57121|FGFR1|2260|fibroblast growth factor receptor 1	X57122|FGFR1|2260|fibroblast growth factor receptor 1	M37722|FGFR1|2260|fibroblast growth factor receptor 1	M34185|FGFR1|2260|fibroblast growth factor receptor 1
hg18_v1_chr11_+_93394025_93394025	0.109322	SOX2.p2	NM_001098672|HEPHL1|341208|hephaestin-like 1
hg18_v1_chr1_+_96959762_96959982	0.109073	SOX2.p2	NM_021190|PTBP2|58155|polypyrimidine tract binding protein 2	AK092216|PTBP2|58155|polypyrimidine tract binding protein 2	AB051232|PTBP2|58155|polypyrimidine tract binding protein 2	AK299755|PTBP2|58155|polypyrimidine tract binding protein 2	AK299922|PTBP2|58155|polypyrimidine tract binding protein 2	AB209266|PTBP2|58155|polypyrimidine tract binding protein 2	AF530580|PTBP2|58155|polypyrimidine tract binding protein 2	AF530581|PTBP2|58155|polypyrimidine tract binding protein 2	AF176085|PTBP2|58155|polypyrimidine tract binding protein 2	AK299897|PTBP2|58155|polypyrimidine tract binding protein 2	BC016582|PTBP2|58155|polypyrimidine tract binding protein 2	AB051233|PTBP2|58155|polypyrimidine tract binding protein 2
hg18_v1_chr1_+_243065590_243065628	0.108948	SOX2.p2	AK000866|FAM36A|116228|family with sequence similarity 36, member A	BC095486|FAM36A|116228|family with sequence similarity 36, member A	AK300760|FAM36A|116228|family with sequence similarity 36, member A	BC064399|FAM36A|116228|family with sequence similarity 36, member A	AF086182|FAM36A|116228|family with sequence similarity 36, member A
hg18_v1_chr10_-_73784661_73784707	0.108871	SOX2.p2	BC064920|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12	CR606618|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12	AK000034|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12	AK225051|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12
hg18_v1_chr1_+_67923331_67923550	0.108685	SOX2.p2	CR612719|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha	AK314991|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha	NM_001924|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha	CR608507|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha	CR613302|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha	M60974|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha	BC011757|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha	DQ008445|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha	EF581092|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha	EF614238|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha	CR623510|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha	CR609553|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha
hg18_v1_chr1_+_109057078_109057078	0.108609	SOX2.p2	NM_001144937|FNDC7|163479|fibronectin type III domain containing 7
hg18_v1_chr4_+_114190233_114190333	0.108519	SOX2.p2	NM_001148|ANK2|287|ankyrin 2, neuronal	NM_020977|ANK2|287|ankyrin 2, neuronal	AK299767|ANK2|287|ankyrin 2, neuronal	AK307601|ANK2|287|ankyrin 2, neuronal	X56958|ANK2|287|ankyrin 2, neuronal	Z26634|ANK2|287|ankyrin 2, neuronal
hg18_v1_chr17_-_37196463_37196555	0.108485	SOX2.p2	AK226051|JUP|3728|junction plakoglobin	M23410|JUP|3728|junction plakoglobin	Z68228|JUP|3728|junction plakoglobin	BC000441|JUP|3728|junction plakoglobin	NM_002230|JUP|3728|junction plakoglobin	NM_021991|JUP|3728|junction plakoglobin
hg18_v1_chr10_-_105835609_105835630	0.108438	SOX2.p2	BC004478|COL17A1|1308|collagen, type XVII, alpha 1	NM_000494|COL17A1|1308|collagen, type XVII, alpha 1
hg18_v1_chr1_-_198644111_198644212	0.108413	SOX2.p2	AK022921|ZNF281|23528|zinc finger protein 281
hg18_v1_chr17_-_16038607_16038680	0.108301	SOX2.p2	AB028970|NCOR1|9611|nuclear receptor corepressor 1	BC167431|NCOR1|9611|nuclear receptor corepressor 1	NM_001190438|NCOR1|9611|nuclear receptor corepressor 1	NM_001190440|NCOR1|9611|nuclear receptor corepressor 1	AF087856|NCOR1|9611|nuclear receptor corepressor 1	AF303586|NCOR1|9611|nuclear receptor corepressor 1
hg18_v1_chr9_-_34610460_34610482	0.108245	SOX2.p2	CR541889|DCTN3|11258|dynactin 3 (p22)	DQ891980|DCTN3|11258|dynactin 3 (p22)	EU176665|DCTN3|11258|dynactin 3 (p22)	BC000319|DCTN3|11258|dynactin 3 (p22)	BC003004|DCTN3|11258|dynactin 3 (p22)	AF082513|DCTN3|11258|dynactin 3 (p22)
hg18_v1_chr5_-_32424352_32424402	0.10824	SOX2.p2	AK295297|ZFR|51663|zinc finger RNA binding protein
hg18_v1_chr3_-_47798308_47798336	0.108016	SOX2.p2	BC039843|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	U66615|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
hg18_v1_chrX_+_11687655_11687681	0.108008	SOX2.p2	NM_006800|MSL3|10943|male-specific lethal 3 homolog (Drosophila)	AK025642|MSL3|10943|male-specific lethal 3 homolog (Drosophila)
hg18_v1_chr3_-_15515382_15515382	0.107916	SOX2.p2	AK128401|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	NM_080538|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase
hg18_v1_chr5_+_78568094_78568227	0.107759	SOX2.p2	
hg18_v1_chr22_+_23925824_23925865	0.107731	SOX2.p2	NM_004076|CRYBB3|1417|crystallin, beta B3	U71216|CRYBB3|1417|crystallin, beta B3	BC069479|CRYBB3|1417|crystallin, beta B3	BC102021|CRYBB3|1417|crystallin, beta B3	BC102022|CRYBB3|1417|crystallin, beta B3	BC107482|CRYBB3|1417|crystallin, beta B3	CR456427|CRYBB3|1417|crystallin, beta B3
hg18_v1_chr17_-_36294962_36295023	0.107727	SOX2.p2	DQ890783|KRT20|54474|keratin 20	DQ896754|KRT20|54474|keratin 20	BC031559|KRT20|54474|keratin 20	AK312744|KRT20|54474|keratin 20	NM_019010|KRT20|54474|keratin 20
hg18_v1_chr17_-_60088637_60088652	0.107596	SOX2.p2	AY014180|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2
hg18_v1_chr16_-_88613287_88613514	0.107413	SOX2.p2	AK022644|DBNDD1|79007|dysbindin (dystrobrevin binding protein 1) domain containing 1	CR594535|DBNDD1|79007|dysbindin (dystrobrevin binding protein 1) domain containing 1	NM_001042610|DBNDD1|79007|dysbindin (dystrobrevin binding protein 1) domain containing 1
hg18_v1_chr1_+_181075104_181075163	0.107381	SOX2.p2	AK308165|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	BC137136|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	BC144494|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	BC014246|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	AF086352|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	BC025245|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	BC008773|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	L13848|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9
hg18_v1_chr2_+_108637698_108637699	0.107296	SOX2.p2	NM_001193485|LIMS1|3987|LIM and senescent cell antigen-like domains 1	AF527759|LIMS1|3987|LIM and senescent cell antigen-like domains 1
hg18_v1_chr5_-_172976196_172976210	0.107271	SOX2.p2	BC003114|BOD1|91272|biorientation of chromosomes in cell division 1
hg18_v1_chr7_+_91408086_91408348	0.107186	SOX2.p2	NM_005751|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9	NM_147185|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9	AJ131693|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9	AF026245|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9	BC015533|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9	AB019691|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9
hg18_v1_chr15_+_56511466_56511523	0.107134	SOX2.p2	NM_000236|LIPC|3990|lipase, hepatic	X07228|LIPC|3990|lipase, hepatic	AK293324|LIPC|3990|lipase, hepatic	AK309448|LIPC|3990|lipase, hepatic	D83548|LIPC|3990|lipase, hepatic	BC132825|LIPC|3990|lipase, hepatic	BC136495|LIPC|3990|lipase, hepatic	J03895|LIPC|3990|lipase, hepatic	J03540|LIPC|3990|lipase, hepatic
hg18_v1_chr15_-_57013092_57013155	0.106908	SOX2.p2	BC140851|SLTM|79811|SAFB-like, transcription modulator	NM_001013843|SLTM|79811|SAFB-like, transcription modulator	NM_024755|SLTM|79811|SAFB-like, transcription modulator
hg18_v1_chr4_+_38740246_38740246	0.10682	SOX2.p2	AK289785|KLHL5|51088|kelch-like 5 (Drosophila)	NM_015990|KLHL5|51088|kelch-like 5 (Drosophila)	NM_199039|KLHL5|51088|kelch-like 5 (Drosophila)
hg18_v1_chr6_+_167445284_167445284	0.106586	SOX2.p2	NM_004367|CCR6|1235|chemokine (C-C motif) receptor 6
hg18_v1_chr5_+_150137700_150137700	0.106513	SOX2.p2	AK125286|C5orf62|85027|chromosome 5 open reading frame 62	NM_032947|C5orf62|85027|chromosome 5 open reading frame 62
hg18_v1_chr4_+_6768682_6768797	0.106457	SOX2.p2	CR625701|CNO|55330|cappuccino homolog (mouse)	CR626399|CNO|55330|cappuccino homolog (mouse)	AK002092|CNO|55330|cappuccino homolog (mouse)	NM_018366|CNO|55330|cappuccino homolog (mouse)	CR598245|CNO|55330|cappuccino homolog (mouse)
hg18_v1_chrX_-_24575146_24575346	0.106066	SOX2.p2	AF148464|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	AF052510|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	CR618952|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta
hg18_v1_chr16_-_19440786_19440969	0.105882	SOX2.p2	AY463154|GDE1|51573|glycerophosphodiester phosphodiesterase 1	BC014981|GDE1|51573|glycerophosphodiester phosphodiesterase 1	AF306698|GDE1|51573|glycerophosphodiester phosphodiesterase 1	CR624901|GDE1|51573|glycerophosphodiester phosphodiesterase 1	CR590251|GDE1|51573|glycerophosphodiester phosphodiesterase 1	CR605351|GDE1|51573|glycerophosphodiester phosphodiesterase 1	CR607083|GDE1|51573|glycerophosphodiester phosphodiesterase 1	BC025273|GDE1|51573|glycerophosphodiester phosphodiesterase 1	CR605785|GDE1|51573|glycerophosphodiester phosphodiesterase 1	BC001538|GDE1|51573|glycerophosphodiester phosphodiesterase 1	CR612471|GDE1|51573|glycerophosphodiester phosphodiesterase 1	AF212862|GDE1|51573|glycerophosphodiester phosphodiesterase 1	BC012153|GDE1|51573|glycerophosphodiester phosphodiesterase 1	CR591783|GDE1|51573|glycerophosphodiester phosphodiesterase 1	CR620034|GDE1|51573|glycerophosphodiester phosphodiesterase 1	AK312912|GDE1|51573|glycerophosphodiester phosphodiesterase 1	NM_016641|GDE1|51573|glycerophosphodiester phosphodiesterase 1
hg18_v1_chr11_+_44026106_44026140	0.10585	SOX2.p2	AB231734|ACCSL|390110|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)-like	NM_001031854|ACCSL|390110|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)-like	BC144554|ACCSL|390110|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)-like
hg18_v1_chr1_+_47572075_47572204	0.105835	SOX2.p2	BC017806|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	AF087865|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	AF112216|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	CR602827|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	AF110643|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	AK223014|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	AK294294|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	AK298502|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	AF070416|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	AK025258|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	AK293238|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	AK312693|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	BC014961|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	DQ892213|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	DQ895408|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	DQ895409|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic
hg18_v1_chr19_-_45416043_45416106	0.105671	SOX2.p2	CR617938|TTC9B|148014|tetratricopeptide repeat domain 9B
hg18_v1_chrX_+_108665665_108665676	0.105662	SOX2.p2	AK023289|NXT2|55916|nuclear transport factor 2-like export factor 2	NM_018698|NXT2|55916|nuclear transport factor 2-like export factor 2	BC120984|NXT2|55916|nuclear transport factor 2-like export factor 2	BC120985|NXT2|55916|nuclear transport factor 2-like export factor 2
hg18_v1_chr17_-_45110339_45110523	0.105612	SOX2.p2	BC003385|SPOP|8405|speckle-type POZ protein	CR595475|SPOP|8405|speckle-type POZ protein	CR603514|SPOP|8405|speckle-type POZ protein	AK222589|SPOP|8405|speckle-type POZ protein	AK312691|SPOP|8405|speckle-type POZ protein	AJ000644|SPOP|8405|speckle-type POZ protein	CR592684|SPOP|8405|speckle-type POZ protein	AK303268|SPOP|8405|speckle-type POZ protein	CR590571|SPOP|8405|speckle-type POZ protein	AK316366|SPOP|8405|speckle-type POZ protein	BC001269|SPOP|8405|speckle-type POZ protein	AK293587|SPOP|8405|speckle-type POZ protein	AK300616|SPOP|8405|speckle-type POZ protein	NM_001007226|SPOP|8405|speckle-type POZ protein	NM_001007227|SPOP|8405|speckle-type POZ protein	NM_001007228|SPOP|8405|speckle-type POZ protein	NM_001007229|SPOP|8405|speckle-type POZ protein	NM_001007230|SPOP|8405|speckle-type POZ protein	NM_003563|SPOP|8405|speckle-type POZ protein
hg18_v1_chr1_-_222688623_222688623	0.105378	SOX2.p2	AB209887|WDR26|80232|WD repeat domain 26	NM_001115113|WDR26|80232|WD repeat domain 26	NM_025160|WDR26|80232|WD repeat domain 26
hg18_v1_chrX_+_70420194_70420219	0.104952	SOX2.p2	AK297144|NONO|4841|non-POU domain containing, octamer-binding
hg18_v1_chr4_-_151990061_151990138	0.104786	SOX2.p2	AB208838|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing
hg18_v1_chr12_-_67643286_67643287	0.104682	SOX2.p2	J04970|CPM|1368|carboxypeptidase M	NM_001874|CPM|1368|carboxypeptidase M	AK127859|CPM|1368|carboxypeptidase M
hg18_v1_chr3_+_184836049_184836139	0.104637	SOX2.p2	BC142993|KLHL24|54800|kelch-like 24 (Drosophila)	AK026326|KLHL24|54800|kelch-like 24 (Drosophila)	AY422472|KLHL24|54800|kelch-like 24 (Drosophila)	BX648466|KLHL24|54800|kelch-like 24 (Drosophila)	BX648812|KLHL24|54800|kelch-like 24 (Drosophila)	NM_017644|KLHL24|54800|kelch-like 24 (Drosophila)
hg18_v1_chr5_-_137876416_137876489	0.104634	SOX2.p2	X80916|ETF1|2107|eukaryotic translation termination factor 1
hg18_v1_chr11_-_123261549_123261549	0.104587	SOX2.p2	AY634366|TMEM225|338661|transmembrane protein 225	NM_001013743|TMEM225|338661|transmembrane protein 225
hg18_v1_chr4_+_53938567_53938578	0.104579	SOX2.p2	NM_001134937|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	NM_001134938|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	NM_030917|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg18_v1_chr6_+_34964999_34965157	0.104521	SOX2.p2	BC022396|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A	NM_015245|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A	D86982|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A	BC031934|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A	AK298987|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A	BC132832|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A	BC144341|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A
hg18_v1_chrX_-_76824726_76824936	0.10438	SOX2.p2	CR605020|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	U09820|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	AK293241|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked
hg18_v1_chr16_-_87646856_87646885	0.104216	SOX2.p2	
hg18_v1_chr6_-_80001043_80001111	0.103877	SOX2.p2	L40357|HMGN3|9324|high mobility group nucleosomal binding domain 3	AF401520|HMGN3|9324|high mobility group nucleosomal binding domain 3	AF274949|HMGN3|9324|high mobility group nucleosomal binding domain 3	CR599808|HMGN3|9324|high mobility group nucleosomal binding domain 3	BC009529|HMGN3|9324|high mobility group nucleosomal binding domain 3
hg18_v1_chr10_+_92970487_92970541	0.103848	SOX2.p2	AL832496|PCGF5|84333|polycomb group ring finger 5
hg18_v1_chr2_+_173794692_173794736	0.103694	SOX2.p2	CR606268|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK
hg18_v1_chr8_-_33544184_33544226	0.10366	SOX2.p2	AK022588|RNF122|79845|ring finger protein 122	NM_024787|RNF122|79845|ring finger protein 122
hg18_v1_chr3_+_156280129_156280157	0.103538	SOX2.p2	AK310664|MME|4311|membrane metallo-endopeptidase	NM_000902|MME|4311|membrane metallo-endopeptidase	BX647134|MME|4311|membrane metallo-endopeptidase
hg18_v1_chr1_+_165330710_165330710	0.10339	SOX2.p2	NM_001080426|DUSP27|92235|dual specificity phosphatase 27 (putative)
hg18_v1_chr21_-_32026258_32026270	0.102807	SOX2.p2	BC043353|SCAF4|57466|SR-related CTD-associated factor 4
hg18_v1_chr4_+_77214886_77214900	0.10258	SOX2.p2	AY543660|ART3|419|ADP-ribosyltransferase 3	BC008397|ART3|419|ADP-ribosyltransferase 3	BC017913|ART3|419|ADP-ribosyltransferase 3	NM_001130016|ART3|419|ADP-ribosyltransferase 3	NM_001179|ART3|419|ADP-ribosyltransferase 3	AK295305|ART3|419|ADP-ribosyltransferase 3	AK308810|ART3|419|ADP-ribosyltransferase 3	AY543655|ART3|419|ADP-ribosyltransferase 3
hg18_v1_chr3_-_113334657_113334841	0.102535	SOX2.p2	BC030506|GCET2|257144|germinal center expressed transcript 2	AY212246|GCET2|257144|germinal center expressed transcript 2	CR625820|GCET2|257144|germinal center expressed transcript 2	AK313368|GCET2|257144|germinal center expressed transcript 2	AF521911|GCET2|257144|germinal center expressed transcript 2	NM_001190259|GCET2|257144|germinal center expressed transcript 2	NM_001190260|GCET2|257144|germinal center expressed transcript 2	NM_152785|GCET2|257144|germinal center expressed transcript 2
hg18_v1_chr12_-_8584658_8584825	0.102438	SOX2.p2	BC000715|CLEC4E|26253|C-type lectin domain family 4, member E	AY358499|CLEC4E|26253|C-type lectin domain family 4, member E	AB024718|CLEC4E|26253|C-type lectin domain family 4, member E	NM_014358|CLEC4E|26253|C-type lectin domain family 4, member E	AK312671|CLEC4E|26253|C-type lectin domain family 4, member E
hg18_v1_chr1_+_153302825_153302923	0.102431	SOX2.p2	NM_005227|EFNA4|1945|ephrin-A4	NM_182689|EFNA4|1945|ephrin-A4	NM_182690|EFNA4|1945|ephrin-A4	BC107483|EFNA4|1945|ephrin-A4	AJ006352|EFNA4|1945|ephrin-A4	AJ006353|EFNA4|1945|ephrin-A4	U14188|EFNA4|1945|ephrin-A4	CR533569|EFNA4|1945|ephrin-A4
hg18_v1_chr12_+_68459015_68459087	0.10231	SOX2.p2	AK027671|RAB3IP|117177|RAB3A interacting protein (rabin3)	BC015548|RAB3IP|117177|RAB3A interacting protein (rabin3)	NM_001024647|RAB3IP|117177|RAB3A interacting protein (rabin3)	AK027566|RAB3IP|117177|RAB3A interacting protein (rabin3)
hg18_v1_chr15_-_38953628_38953850	0.102178	SOX2.p2	AY059636|RHOV|171177|ras homolog gene family, member V	CR615243|RHOV|171177|ras homolog gene family, member V	BC112945|RHOV|171177|ras homolog gene family, member V	CR618466|RHOV|171177|ras homolog gene family, member V	BC019353|RHOV|171177|ras homolog gene family, member V	BC105020|RHOV|171177|ras homolog gene family, member V	BC105022|RHOV|171177|ras homolog gene family, member V	AB079131|RHOV|171177|ras homolog gene family, member V	CR599960|RHOV|171177|ras homolog gene family, member V	NM_133639|RHOV|171177|ras homolog gene family, member V
hg18_v1_chr8_+_1940282_1940348	0.101902	SOX2.p2	AF009203|KBTBD11|9920|kelch repeat and BTB (POZ) domain containing 11
hg18_v1_chrX_-_85189194_85189221	0.101847	SOX2.p2	AK299323|CHM|1121|choroideremia (Rab escort protein 1)	BC032237|CHM|1121|choroideremia (Rab escort protein 1)	BC130494|CHM|1121|choroideremia (Rab escort protein 1)	BC130496|CHM|1121|choroideremia (Rab escort protein 1)	AK291160|CHM|1121|choroideremia (Rab escort protein 1)	AK312443|CHM|1121|choroideremia (Rab escort protein 1)	NM_000390|CHM|1121|choroideremia (Rab escort protein 1)	NM_001145414|CHM|1121|choroideremia (Rab escort protein 1)	X78121|CHM|1121|choroideremia (Rab escort protein 1)
hg18_v1_chr12_-_78831821_78831821	0.101831	SOX2.p2	AK302692|PPP1R12A|4659|protein phosphatase 1, regulatory (inhibitor) subunit 12A	NM_001143886|PPP1R12A|4659|protein phosphatase 1, regulatory (inhibitor) subunit 12A
hg18_v1_chr4_+_88961573_88961586	0.101758	SOX2.p2	AK075076|MEPE|56955|matrix extracellular phosphoglycoprotein	NM_001184694|MEPE|56955|matrix extracellular phosphoglycoprotein
hg18_v1_chr9_+_124463665_124463815	0.101569	SOX2.p2	NM_001005236|OR1L1|26737|olfactory receptor, family 1, subfamily L, member 1
hg18_v1_chr5_-_111120929_111121032	0.101563	SOX2.p2	CR618085|C5orf13|9315|chromosome 5 open reading frame 13	NM_001142482|C5orf13|9315|chromosome 5 open reading frame 13	NM_001142481|C5orf13|9315|chromosome 5 open reading frame 13
hg18_v1_chr15_+_20444155_20444160	0.101557	SOX2.p2	AY763578|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1
hg18_v1_chr10_+_35504526_35504555	0.101524	SOX2.p2	AY292864|CREM|1390|cAMP responsive element modulator	NM_182769|CREM|1390|cAMP responsive element modulator	NM_182770|CREM|1390|cAMP responsive element modulator	BC090051|CREM|1390|cAMP responsive element modulator	AK301906|CREM|1390|cAMP responsive element modulator
hg18_v1_chr1_-_177378801_177378846	0.101497	SOX2.p2	FJ542283|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	BC065912|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	AK225255|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	AK309549|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	NM_001136000|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	NM_001168239|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	NM_005158|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2
hg18_v1_chr4_+_25931725_25931744	0.101348	SOX2.p2	AK302230|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region	CR624016|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region
hg18_v1_chr1_-_153107084_153107166	0.101316	SOX2.p2	
hg18_v1_chr5_-_146415782_146415892	0.101269	SOX2.p2	BC031790|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta	NM_181674|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta	NM_181676|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta
hg18_v1_chr15_-_21483457_21483495	0.101251	SOX2.p2	CR618136|NDN|4692|necdin homolog (mouse)	CR621492|NDN|4692|necdin homolog (mouse)	CR626299|NDN|4692|necdin homolog (mouse)
hg18_v1_chr10_+_70172257_70172311	0.101237	SOX2.p2	AK000741|CCAR1|55749|cell division cycle and apoptosis regulator 1
hg18_v1_chr5_-_14924555_14925155	0.10119	SOX2.p2	DQ892588|ANKH|56172|ankylosis, progressive homolog (mouse)	DQ895806|ANKH|56172|ankylosis, progressive homolog (mouse)	AK222631|ANKH|56172|ankylosis, progressive homolog (mouse)	AK315012|ANKH|56172|ankylosis, progressive homolog (mouse)	BC014526|ANKH|56172|ankylosis, progressive homolog (mouse)	AF274753|ANKH|56172|ankylosis, progressive homolog (mouse)	AY358503|ANKH|56172|ankylosis, progressive homolog (mouse)	AB046801|ANKH|56172|ankylosis, progressive homolog (mouse)	BC009835|ANKH|56172|ankylosis, progressive homolog (mouse)	NM_054027|ANKH|56172|ankylosis, progressive homolog (mouse)
hg18_v1_chr2_+_176672775_176672775	0.101003	SOX2.p2	BC069088|HOXD12|3238|homeobox D12	BC121103|HOXD12|3238|homeobox D12	BC121104|HOXD12|3238|homeobox D12	NM_021193|HOXD12|3238|homeobox D12
hg18_v1_chrX_-_135790509_135790529	0.10083	SOX2.p2	CR597391|RBMX|27316|RNA binding motif protein, X-linked
hg18_v1_chr17_+_36642240_36642277	0.100797	SOX2.p2	AJ406947|KRTAP9-3|83900|keratin associated protein 9-3	NM_031962|KRTAP9-3|83900|keratin associated protein 9-3	BC074918|KRTAP9-3|83900|keratin associated protein 9-3	BC074919|KRTAP9-3|83900|keratin associated protein 9-3	AJ406951|KRTAP9-9|81870|keratin associated protein 9-9
hg18_v1_chr3_+_143824955_143825033	0.10079	SOX2.p2	NM_002670|PLS1|5357|plastin 1	L20826|PLS1|5357|plastin 1
hg18_v1_chr1_-_108588186_108588225	0.100633	SOX2.p2	BC125161|NBPF6|653149|neuroblastoma breakpoint family, member 6	BC125162|NBPF4|148545|neuroblastoma breakpoint family, member 4	AK057395|NBPF4|148545|neuroblastoma breakpoint family, member 4	AK316438|NBPF4|148545|neuroblastoma breakpoint family, member 4	AK302318|NBPF4|148545|neuroblastoma breakpoint family, member 4	NM_001143989|NBPF4|148545|neuroblastoma breakpoint family, member 4
hg18_v1_chr16_+_1246273_1246282	0.100618	SOX2.p2	NM_012217|TPSD1|23430|tryptase delta 1	BC069143|TPSD1|23430|tryptase delta 1
hg18_v1_chr7_+_100515439_100515522	0.100597	SOX2.p2	BC005847|TRIM56|81844|tripartite motif containing 56	BC048194|TRIM56|81844|tripartite motif containing 56	NM_030961|TRIM56|81844|tripartite motif containing 56	BC011882|TRIM56|81844|tripartite motif containing 56
hg18_v1_chr10_+_22645370_22645412	0.100457	SOX2.p2	CR623274|COMMD3|23412|COMM domain containing 3
hg18_v1_chr1_-_198645695_198645785	0.100454	SOX2.p2	AK297233|ZNF281|23528|zinc finger protein 281	AK022916|ZNF281|23528|zinc finger protein 281	AK094701|ZNF281|23528|zinc finger protein 281
hg18_v1_chr12_-_10893318_10893341	0.100372	SOX2.p2	S79048|PRR4|11272|proline rich 4 (lacrimal)	AF530472|PRR4|11272|proline rich 4 (lacrimal)	BX537839|PRR4|11272|proline rich 4 (lacrimal)	AK304321|PRR4|11272|proline rich 4 (lacrimal)	AK292991|PRR4|11272|proline rich 4 (lacrimal)	AK311715|PRR4|11272|proline rich 4 (lacrimal)	BC058035|PRR4|11272|proline rich 4 (lacrimal)	AK292934|PRR4|11272|proline rich 4 (lacrimal)	NM_007244|PRR4|11272|proline rich 4 (lacrimal)
hg18_v1_chr6_+_57062937_57062943	0.100255	SOX2.p2	BX648081|ZNF451|26036|zinc finger protein 451
hg18_v1_chr1_-_26197121_26197234	0.100199	SOX2.p2	BC001158|PAFAH2|5051|platelet-activating factor acetylhydrolase 2, 40kDa	U89386|PAFAH2|5051|platelet-activating factor acetylhydrolase 2, 40kDa	CR597579|PAFAH2|5051|platelet-activating factor acetylhydrolase 2, 40kDa	AK313815|PAFAH2|5051|platelet-activating factor acetylhydrolase 2, 40kDa	D87845|PAFAH2|5051|platelet-activating factor acetylhydrolase 2, 40kDa	NM_000437|PAFAH2|5051|platelet-activating factor acetylhydrolase 2, 40kDa
hg18_v1_chr7_+_116182676_116182699	0.100138	SOX2.p2	
hg18_v1_chr5_+_140494971_140495201	0.100113	SOX2.p2	AK023190|PCDHB5|26167|protocadherin beta 5	NM_015669|PCDHB5|26167|protocadherin beta 5	BC001186|PCDHB5|26167|protocadherin beta 5	AB209393|PCDHB5|26167|protocadherin beta 5	AF134474|PCDHB5|26167|protocadherin beta 5	AF152498|PCDHB5|26167|protocadherin beta 5	AF217753|PCDHB5|26167|protocadherin beta 5	DQ891873|PCDHB5|26167|protocadherin beta 5	DQ895061|PCDHB5|26167|protocadherin beta 5
hg18_v1_chr15_+_63609895_63610058	0.100059	SOX2.p2	BC011443|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	AK027421|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	BC000194|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	CR600449|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	AJ271091|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1
hg18_v1_chr16_-_1404635_1404723	0.0998678	SOX2.p2	AM944365|UNKL|64718|unkempt homolog (Drosophila)-like	BC011924|UNKL|64718|unkempt homolog (Drosophila)-like	AK124977|UNKL|64718|unkempt homolog (Drosophila)-like	NM_001037125|UNKL|64718|unkempt homolog (Drosophila)-like	NM_001193388|UNKL|64718|unkempt homolog (Drosophila)-like
hg18_v1_chr6_-_139737432_139737476	0.0998412	SOX2.p2	BC004377|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2	U65093|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2	AF109161|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
hg18_v1_chr21_+_17807167_17807318	0.0996548	SOX2.p2	NM_001338|CXADR|1525|coxsackie virus and adenovirus receptor	BC003684|CXADR|1525|coxsackie virus and adenovirus receptor	AK313526|CXADR|1525|coxsackie virus and adenovirus receptor	BC010536|CXADR|1525|coxsackie virus and adenovirus receptor	Y07593|CXADR|1525|coxsackie virus and adenovirus receptor	DQ891181|CXADR|1525|coxsackie virus and adenovirus receptor	DQ894363|CXADR|1525|coxsackie virus and adenovirus receptor	AF124598|CXADR|1525|coxsackie virus and adenovirus receptor	AY072910|CXADR|1525|coxsackie virus and adenovirus receptor	AY072911|CXADR|1525|coxsackie virus and adenovirus receptor	AY072912|CXADR|1525|coxsackie virus and adenovirus receptor	BT019876|CXADR|1525|coxsackie virus and adenovirus receptor	GU474812|CXADR|1525|coxsackie virus and adenovirus receptor	U90716|CXADR|1525|coxsackie virus and adenovirus receptor
hg18_v1_chr20_+_54541672_54541766	0.0996305	SOX2.p2	BC014951|C20orf107|388799|chromosome 20 open reading frame 107	NM_001013646|C20orf107|388799|chromosome 20 open reading frame 107	CR593795|C20orf107|388799|chromosome 20 open reading frame 107
hg18_v1_chr2_-_47235929_47236020	0.0995267	SOX2.p2	AK097491|C2orf61|285051|chromosome 2 open reading frame 61	NM_001163561|C2orf61|285051|chromosome 2 open reading frame 61	NM_173649|C2orf61|285051|chromosome 2 open reading frame 61
hg18_v1_chr7_-_148212292_148212309	0.09947	SOX2.p2	BC010858|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	AB208895|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)
hg18_v1_chr5_+_132433979_132434025	0.0992596	SOX2.p2	AK295847|HSPA4|3308|heat shock 70kDa protein 4	AK311471|HSPA4|3308|heat shock 70kDa protein 4
hg18_v1_chr22_+_17799341_17799424	0.0990836	SOX2.p2	AK123768|MRPL40|64976|mitochondrial ribosomal protein L40
hg18_v1_chr12_-_100979923_100980060	0.0990093	SOX2.p2	AK314970|CCDC53|51019|coiled-coil domain containing 53	AK223339|CCDC53|51019|coiled-coil domain containing 53	AF151874|CCDC53|51019|coiled-coil domain containing 53	AF155655|CCDC53|51019|coiled-coil domain containing 53	CR621235|CCDC53|51019|coiled-coil domain containing 53	CR623956|CCDC53|51019|coiled-coil domain containing 53	NM_016053|CCDC53|51019|coiled-coil domain containing 53
hg18_v1_chr11_+_13646806_13646820	0.0990069	SOX2.p2	CR936619|FAR1|84188|fatty acyl CoA reductase 1	CR611981|FAR1|84188|fatty acyl CoA reductase 1
hg18_v1_chr11_-_5279750_5279751	0.0989338	SOX2.p2	BC100919|OR51B4|79339|olfactory receptor, family 51, subfamily B, member 4	BC069094|OR51B4|79339|olfactory receptor, family 51, subfamily B, member 4	BC148186|OR51B4|79339|olfactory receptor, family 51, subfamily B, member 4	BC153815|OR51B4|79339|olfactory receptor, family 51, subfamily B, member 4	NM_033179|OR51B4|79339|olfactory receptor, family 51, subfamily B, member 4
hg18_v1_chr1_+_50347176_50347181	0.0987522	SOX2.p2	NM_001144774|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	NM_021952|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
hg18_v1_chr2_+_196230096_196230210	0.0987291	SOX2.p2	NM_020342|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	AK294771|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	AB033091|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	AK291241|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	BC101516|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	BC112223|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	BC010371|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	AL050294|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10
hg18_v1_chr4_+_144654005_144654352	0.0986222	SOX2.p2	NM_003601|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	AK316444|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	AK302841|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	BC023144|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	AB010882|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	AK308424|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5
hg18_v1_chr1_+_181075059_181075101	0.0986169	SOX2.p2	NM_001357|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	AK226102|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9
hg18_v1_chr1_-_114156387_114156422	0.0983851	SOX2.p2	CR627402|RSBN1|54665|round spermatid basic protein 1
hg18_v1_chr6_-_80001116_80001173	0.0983028	SOX2.p2	AK315391|HMGN3|9324|high mobility group nucleosomal binding domain 3	CR604353|HMGN3|9324|high mobility group nucleosomal binding domain 3	AY043282|HMGN3|9324|high mobility group nucleosomal binding domain 3	NM_004242|HMGN3|9324|high mobility group nucleosomal binding domain 3	NM_138730|HMGN3|9324|high mobility group nucleosomal binding domain 3
hg18_v1_chr6_+_31791063_31791111	0.0982163	SOX2.p2	AJ315535|LY6G6D|58530|lymphocyte antigen 6 complex, locus G6D	AJ315536|LY6G6D|58530|lymphocyte antigen 6 complex, locus G6D	AJ315537|LY6G6D|58530|lymphocyte antigen 6 complex, locus G6D	BC125138|LY6G6D|58530|lymphocyte antigen 6 complex, locus G6D	NM_021246|LY6G6D|58530|lymphocyte antigen 6 complex, locus G6D
hg18_v1_chr13_+_96884682_96884725	0.0981319	SOX2.p2	AF205602|RAP2A|5911|RAP2A, member of RAS oncogene family	BC070031|RAP2A|5911|RAP2A, member of RAS oncogene family	EU832309|RAP2A|5911|RAP2A, member of RAS oncogene family	EU832393|RAP2A|5911|RAP2A, member of RAS oncogene family	X12534|RAP2A|5911|RAP2A, member of RAS oncogene family	AF493914|RAP2A|5911|RAP2A, member of RAS oncogene family
hg18_v1_chr8_+_102573837_102573845	0.0979413	SOX2.p2	NM_024915|GRHL2|79977|grainyhead-like 2 (Drosophila)	AK296817|GRHL2|79977|grainyhead-like 2 (Drosophila)	AK310221|GRHL2|79977|grainyhead-like 2 (Drosophila)
hg18_v1_chr1_-_153109349_153109391	0.0977488	SOX2.p2	AF031815|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	Y08263|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	AJ251016|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	AK310077|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	NM_002249|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3
hg18_v1_chr1_+_70459592_70459666	0.0976864	SOX2.p2	BC017359|SRSF11|9295|serine/arginine-rich splicing factor 11
hg18_v1_chr9_+_102244005_102244041	0.0975888	SOX2.p2	CR599657|C9orf30|91283|chromosome 9 open reading frame 30	CR601135|C9orf30|91283|chromosome 9 open reading frame 30	NM_001198812|C9orf3-TMEFF1|100526694|C9orf3-TMEFF1 readthrough	AY598327|C9orf30|91283|chromosome 9 open reading frame 30
hg18_v1_chr14_+_74299748_74299822	0.097503	SOX2.p2	AK095760|YLPM1|56252|YLP motif containing 1	NM_019589|YLPM1|56252|YLP motif containing 1
hg18_v1_chr4_+_184817422_184817474	0.0974939	SOX2.p2	AL833571|C4orf41|60684|chromosome 4 open reading frame 41	AK096345|C4orf41|60684|chromosome 4 open reading frame 41	BX648499|C4orf41|60684|chromosome 4 open reading frame 41	NM_021942|C4orf41|60684|chromosome 4 open reading frame 41	NM_199053|C4orf41|60684|chromosome 4 open reading frame 41	BX647127|C4orf41|60684|chromosome 4 open reading frame 41	BX538044|C4orf41|60684|chromosome 4 open reading frame 41	BC040530|C4orf41|60684|chromosome 4 open reading frame 41	BC051724|C4orf41|60684|chromosome 4 open reading frame 41
hg18_v1_chrX_-_110542040_110542115	0.0974638	SOX2.p2	AF040254|DCX|1641|doublecortin	AF040255|DCX|1641|doublecortin	BC027925|DCX|1641|doublecortin	AK290455|DCX|1641|doublecortin	AK299822|DCX|1641|doublecortin	NM_178151|DCX|1641|doublecortin	NM_001195553|DCX|1641|doublecortin	NM_178152|DCX|1641|doublecortin	NM_178153|DCX|1641|doublecortin
hg18_v1_chr15_+_20444164_20444192	0.0973121	SOX2.p2	D38549|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1	BC005097|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1
hg18_v1_chr7_+_129720209_129720255	0.097296	SOX2.p2	AK290993|CPA4|51200|carboxypeptidase A4	NM_001163446|CPA4|51200|carboxypeptidase A4	NM_016352|CPA4|51200|carboxypeptidase A4	BC052289|CPA4|51200|carboxypeptidase A4	AK310933|CPA4|51200|carboxypeptidase A4	AK298553|CPA4|51200|carboxypeptidase A4	AK298550|CPA4|51200|carboxypeptidase A4	AK299023|CPA4|51200|carboxypeptidase A4	AY358699|CPA4|51200|carboxypeptidase A4	AF095719|CPA4|51200|carboxypeptidase A4
hg18_v1_chrX_-_151911260_151911416	0.0972552	SOX2.p2	BC101111|PNMA5|114824|paraneoplastic antigen like 5	BC101112|PNMA5|114824|paraneoplastic antigen like 5	BC101113|PNMA5|114824|paraneoplastic antigen like 5	AK295446|PNMA5|114824|paraneoplastic antigen like 5	AK316104|PNMA5|114824|paraneoplastic antigen like 5	AB067521|PNMA5|114824|paraneoplastic antigen like 5	AY121806|PNMA5|114824|paraneoplastic antigen like 5	NM_001103150|PNMA5|114824|paraneoplastic antigen like 5	NM_001103151|PNMA5|114824|paraneoplastic antigen like 5	NM_052926|PNMA5|114824|paraneoplastic antigen like 5
hg18_v1_chr14_-_104333060_104333120	0.0971695	SOX2.p2	BC000479|AKT1|207|v-akt murine thymoma viral oncogene homolog 1	BC084538|AKT1|207|v-akt murine thymoma viral oncogene homolog 1
hg18_v1_chr1_+_109043711_109043726	0.09708	SOX2.p2	AY211915|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B
hg18_v1_chr7_+_143043871_143043895	0.0969372	SOX2.p2	NM_001130026|FAM115C|285966|family with sequence similarity 115, member C	AK296318|FAM115C|285966|family with sequence similarity 115, member C
hg18_v1_chr9_+_130684601_130684601	0.0964495	SOX2.p2	AK289842|LRRC8A|56262|leucine rich repeat containing 8 family, member A	NM_001127244|LRRC8A|56262|leucine rich repeat containing 8 family, member A
hg18_v1_chr2_-_160838397_160838474	0.0962564	SOX2.p2	BC069687|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	BC069706|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	BC069763|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	BC080620|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	BC065192|RBMS1|5937|RNA binding motif, single stranded interacting protein 1
hg18_v1_chr11_+_13646727_13646805	0.0961401	SOX2.p2	NM_032228|FAR1|84188|fatty acyl CoA reductase 1	AY358784|FAR1|84188|fatty acyl CoA reductase 1
hg18_v1_chr8_-_87590097_87590127	0.0960748	SOX2.p2	NM_016033|FAM82B|51115|family with sequence similarity 82, member B
hg18_v1_chr19_+_60803412_60803563	0.0960533	SOX2.p2	NM_153219|ZNF524|147807|zinc finger protein 524	BC067748|ZNF524|147807|zinc finger protein 524
hg18_v1_chr17_-_24491521_24491554	0.0960326	SOX2.p2	AB177860|MYO18A|399687|myosin XVIIIA	AY703984|MYO18A|399687|myosin XVIIIA	AK303522|MYO18A|399687|myosin XVIIIA	AK302725|MYO18A|399687|myosin XVIIIA
hg18_v1_chr12_+_115833093_115833245	0.0960198	SOX2.p2	BC037296|FBXW8|26259|F-box and WD repeat domain containing 8	NM_012174|FBXW8|26259|F-box and WD repeat domain containing 8	NM_153348|FBXW8|26259|F-box and WD repeat domain containing 8	AK289621|FBXW8|26259|F-box and WD repeat domain containing 8	AF176707|FBXW8|26259|F-box and WD repeat domain containing 8
hg18_v1_chr5_-_134762791_134762810	0.0960129	SOX2.p2	CR597742|H2AFY|9555|H2A histone family, member Y	CR618845|H2AFY|9555|H2A histone family, member Y	CR600032|H2AFY|9555|H2A histone family, member Y
hg18_v1_chr2_+_24003648_24003674	0.0957965	SOX2.p2	BC037901|UBXN2A|165324|UBX domain protein 2A
hg18_v1_chr15_+_57286313_57286376	0.0957626	SOX2.p2	AY642121|LDHAL6B|92483|lactate dehydrogenase A-like 6B	BC022034|LDHAL6B|92483|lactate dehydrogenase A-like 6B	AY009108|LDHAL6B|92483|lactate dehydrogenase A-like 6B	NM_033195|LDHAL6B|92483|lactate dehydrogenase A-like 6B	AK058192|LDHAL6B|92483|lactate dehydrogenase A-like 6B
hg18_v1_chr1_-_239865724_239865854	0.0956934	SOX2.p2	BC117360|CHML|1122|choroideremia-like (Rab escort protein 2)	NM_001821|CHML|1122|choroideremia-like (Rab escort protein 2)	X64728|CHML|1122|choroideremia-like (Rab escort protein 2)
hg18_v1_chrX_+_111005934_111006083	0.0955869	SOX2.p2	NM_001195576|LOC100329135|100329135|hypothetical LOC100329135	NM_001195578|LOC100329135|100329135|hypothetical LOC100329135
hg18_v1_chr1_-_39814659_39814737	0.0955411	SOX2.p2	BC029969|PABPC4|8761|poly(A) binding protein, cytoplasmic 4 (inducible form)
hg18_v1_chrX_+_100111352_100111352	0.0955357	SOX2.p2	AK301813|ARL13A|392509|ADP-ribosylation factor-like 13A	NM_001012990|ARL13A|392509|ADP-ribosylation factor-like 13A	NM_001162490|ARL13A|392509|ADP-ribosylation factor-like 13A	NM_001162491|ARL13A|392509|ADP-ribosylation factor-like 13A
hg18_v1_chr11_-_82460518_82460525	0.0954637	SOX2.p2	AK312323|RAB30|27314|RAB30, member RAS oncogene family
hg18_v1_chr19_-_45416112_45416145	0.095441	SOX2.p2	CR610812|TTC9B|148014|tetratricopeptide repeat domain 9B	CR626768|TTC9B|148014|tetratricopeptide repeat domain 9B	AK054935|TTC9B|148014|tetratricopeptide repeat domain 9B	AK289550|TTC9B|148014|tetratricopeptide repeat domain 9B	BC029539|TTC9B|148014|tetratricopeptide repeat domain 9B	CR596147|TTC9B|148014|tetratricopeptide repeat domain 9B	NM_152479|TTC9B|148014|tetratricopeptide repeat domain 9B
hg18_v1_chr1_-_180908639_180908689	0.0953667	SOX2.p2	BC069677|RGS8|85397|regulator of G-protein signaling 8	BC069718|RGS8|85397|regulator of G-protein signaling 8	BC103865|RGS8|85397|regulator of G-protein signaling 8	BC103866|RGS8|85397|regulator of G-protein signaling 8	BC103867|RGS8|85397|regulator of G-protein signaling 8	AF297015|RGS8|85397|regulator of G-protein signaling 8	NM_001102450|RGS8|85397|regulator of G-protein signaling 8	NM_033345|RGS8|85397|regulator of G-protein signaling 8
hg18_v1_chr5_+_125828685_125828745	0.095324	SOX2.p2	NM_001146322|GRAMD3|65983|GRAM domain containing 3	AK303857|GRAMD3|65983|GRAM domain containing 3
hg18_v1_chr15_+_20444140_20444149	0.0952653	SOX2.p2	AK291604|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1
hg18_v1_chr7_-_75794919_75795084	0.0951532	SOX2.p2	CR598331|YWHAG|7532|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide
hg18_v1_chr2_-_156894927_156894946	0.0948682	SOX2.p2	EU832662|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	EU832740|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2
hg18_v1_chr17_-_70039187_70039207	0.0948666	SOX2.p2	DQ893585|CD300LB|124599|CD300 molecule-like family member b	DQ896833|CD300LB|124599|CD300 molecule-like family member b	BC028091|CD300LB|124599|CD300 molecule-like family member b	AK290925|CD300LB|124599|CD300 molecule-like family member b	AK298665|CD300LB|124599|CD300 molecule-like family member b	NM_174892|CD300LB|124599|CD300 molecule-like family member b
hg18_v1_chr15_+_89248423_89248423	0.0948354	SOX2.p2	BC136448|MAN2A2|4122|mannosidase, alpha, class 2A, member 2	BC144111|MAN2A2|4122|mannosidase, alpha, class 2A, member 2	NM_006122|MAN2A2|4122|mannosidase, alpha, class 2A, member 2
hg18_v1_chr4_+_90252990_90252990	0.0947164	SOX2.p2	AK027653|TIGD2|166815|tigger transposable element derived 2	NM_145715|TIGD2|166815|tigger transposable element derived 2
hg18_v1_chr12_+_6925997_6926000	0.0946989	SOX2.p2	AK313379|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6	NM_080548|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6
hg18_v1_chr5_+_139008139_139008197	0.0945299	SOX2.p2	BC024040|CXXC5|51523|CXXC finger protein 5	BC041013|CXXC5|51523|CXXC finger protein 5	BC050046|CXXC5|51523|CXXC finger protein 5	BC017439|CXXC5|51523|CXXC finger protein 5
hg18_v1_chr1_+_194887630_194887870	0.0942184	SOX2.p2	NM_000186|CFH|3075|complement factor H	NM_001014975|CFH|3075|complement factor H	AK291395|CFH|3075|complement factor H	AK225649|CFH|3075|complement factor H	CR616715|CFH|3075|complement factor H	X07523|CFH|3075|complement factor H	Y00716|CFH|3075|complement factor H	BC037285|CFH|3075|complement factor H	CR598844|CFH|3075|complement factor H	BC012610|CFH|3075|complement factor H	CR601432|CFH|3075|complement factor H	BC110643|CFH|3075|complement factor H	BC073982|CFH|3075|complement factor H	BC142699|CFH|3075|complement factor H
hg18_v1_chr3_-_48729593_48729714	0.0941257	SOX2.p2	BC019694|IP6K2|51447|inositol hexakisphosphate kinase 2	CR591987|IP6K2|51447|inositol hexakisphosphate kinase 2	AK291501|IP6K2|51447|inositol hexakisphosphate kinase 2	AY007091|IP6K2|51447|inositol hexakisphosphate kinase 2	BC001864|IP6K2|51447|inositol hexakisphosphate kinase 2	CR607564|IP6K2|51447|inositol hexakisphosphate kinase 2	CR624222|IP6K2|51447|inositol hexakisphosphate kinase 2	BC065533|IP6K2|51447|inositol hexakisphosphate kinase 2	BC004469|IP6K2|51447|inositol hexakisphosphate kinase 2	CR618536|IP6K2|51447|inositol hexakisphosphate kinase 2	AK304714|IP6K2|51447|inositol hexakisphosphate kinase 2	AK315204|IP6K2|51447|inositol hexakisphosphate kinase 2	CR595634|IP6K2|51447|inositol hexakisphosphate kinase 2	AK024045|IP6K2|51447|inositol hexakisphosphate kinase 2	AK290526|IP6K2|51447|inositol hexakisphosphate kinase 2	AL137514|IP6K2|51447|inositol hexakisphosphate kinase 2	BX537544|IP6K2|51447|inositol hexakisphosphate kinase 2	NM_001005909|IP6K2|51447|inositol hexakisphosphate kinase 2	NM_001005910|IP6K2|51447|inositol hexakisphosphate kinase 2	NM_001005911|IP6K2|51447|inositol hexakisphosphate kinase 2	NM_001146178|IP6K2|51447|inositol hexakisphosphate kinase 2	NM_001146179|IP6K2|51447|inositol hexakisphosphate kinase 2	NM_001190316|IP6K2|51447|inositol hexakisphosphate kinase 2	NM_001190317|IP6K2|51447|inositol hexakisphosphate kinase 2	NM_016291|IP6K2|51447|inositol hexakisphosphate kinase 2
hg18_v1_chr9_+_138810610_138810635	0.0940971	SOX2.p2	NM_001039374|KIAA1984|84960|KIAA1984	BC064582|KIAA1984|84960|KIAA1984	BC137317|KIAA1984|84960|KIAA1984	BC137318|KIAA1984|84960|KIAA1984
hg18_v1_chr6_+_62341966_62341966	0.0939097	SOX2.p2	NM_001190706|MTRNR2L9|100463487|MT-RNR2-like 9
hg18_v1_chr17_+_70964258_70964408	0.0938189	SOX2.p2	NM_014738|KIAA0195|9772|KIAA0195	AK308160|KIAA0195|9772|KIAA0195	BC042942|KIAA0195|9772|KIAA0195	AK304819|KIAA0195|9772|KIAA0195	D83779|KIAA0195|9772|KIAA0195	BC045540|KIAA0195|9772|KIAA0195
hg18_v1_chrX_-_153252775_153252844	0.0937607	SOX2.p2	AB191259|FLNA|2316|filamin A, alpha	AB371575|FLNA|2316|filamin A, alpha	AB371577|FLNA|2316|filamin A, alpha	AB371578|FLNA|2316|filamin A, alpha	AB371579|FLNA|2316|filamin A, alpha	AB191260|FLNA|2316|filamin A, alpha	AB371574|FLNA|2316|filamin A, alpha	AB371576|FLNA|2316|filamin A, alpha	AK090427|FLNA|2316|filamin A, alpha
hg18_v1_chr17_+_24394043_24394043	0.0934524	SOX2.p2	BC008960|PIPOX|51268|pipecolic acid oxidase	NM_016518|PIPOX|51268|pipecolic acid oxidase
hg18_v1_chr20_-_43410437_43410501	0.0933682	SOX2.p2	CR542045|SDC4|6385|syndecan 4	CR542074|SDC4|6385|syndecan 4	DQ890718|SDC4|6385|syndecan 4	DQ893898|SDC4|6385|syndecan 4	X67016|SDC4|6385|syndecan 4	AK222695|SDC4|6385|syndecan 4	AK223243|SDC4|6385|syndecan 4	AK303964|SDC4|6385|syndecan 4	AK312507|SDC4|6385|syndecan 4	BC030805|SDC4|6385|syndecan 4	D13292|SDC4|6385|syndecan 4	NM_002999|SDC4|6385|syndecan 4
hg18_v1_chr2_+_61243132_61243132	0.0930192	SOX2.p2	NM_001143959|C2orf74|339804|chromosome 2 open reading frame 74
hg18_v1_chr4_+_189297591_189297638	0.0929189	SOX2.p2	AK093499|TRIML1|339976|tripartite motif family-like 1	NM_178556|TRIML1|339976|tripartite motif family-like 1	BC113860|TRIML1|339976|tripartite motif family-like 1	BC114469|TRIML1|339976|tripartite motif family-like 1
hg18_v1_chr1_-_222688337_222688430	0.0928683	SOX2.p2	AK307909|WDR26|80232|WD repeat domain 26	BC034498|WDR26|80232|WD repeat domain 26
hg18_v1_chr6_+_42231121_42231161	0.09284	SOX2.p2	AK313865|GUCA1A|2978|guanylate cyclase activator 1A (retina)	NM_000409|GUCA1A|2978|guanylate cyclase activator 1A (retina)	BC031663|GUCA1A|2978|guanylate cyclase activator 1A (retina)	AK125780|GUCA1A|2978|guanylate cyclase activator 1A (retina)
hg18_v1_chr8_-_74822206_74822294	0.0928355	SOX2.p2	AK307841|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	AK293729|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)
hg18_v1_chr4_+_53938666_53938766	0.0927189	SOX2.p2	BC024016|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	BC052959|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	AM392758|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	AK300398|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	AK308145|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg18_v1_chrX_+_133334965_133335121	0.0926875	SOX2.p2	AY157622|PHF6|84295|PHD finger protein 6	NM_001015877|PHF6|84295|PHD finger protein 6	NM_032335|PHF6|84295|PHD finger protein 6	NM_032458|PHF6|84295|PHD finger protein 6	AL832725|PHF6|84295|PHD finger protein 6	AK290095|PHF6|84295|PHD finger protein 6	AK303369|PHF6|84295|PHD finger protein 6	BC005994|PHF6|84295|PHD finger protein 6	AB058726|PHF6|84295|PHD finger protein 6
hg18_v1_chr12_+_68028397_68028400	0.0926842	SOX2.p2	AK130149|LYZ|4069|lysozyme	NM_000239|LYZ|4069|lysozyme
hg18_v1_chr21_+_36364168_36364288	0.0924558	SOX2.p2	CR594171|CBR1|873|carbonyl reductase 1	CR605960|CBR1|873|carbonyl reductase 1	AK294142|CBR1|873|carbonyl reductase 1	J04056|CBR1|873|carbonyl reductase 1	AK308691|CBR1|873|carbonyl reductase 1	AK311219|CBR1|873|carbonyl reductase 1	BC015640|CBR1|873|carbonyl reductase 1	AK314879|CBR1|873|carbonyl reductase 1	CR607402|CBR1|873|carbonyl reductase 1	BC002511|CBR1|873|carbonyl reductase 1	DQ892353|CBR1|873|carbonyl reductase 1	DQ895559|CBR1|873|carbonyl reductase 1	BT019843|CBR1|873|carbonyl reductase 1	CR541708|CBR1|873|carbonyl reductase 1	CR604950|CBR1|873|carbonyl reductase 1
hg18_v1_chr12_-_15005761_15005869	0.092418	SOX2.p2	CR596151|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	BC009200|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	CR590127|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	X69549|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	CR596642|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	CR616298|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	CR624952|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	L07916|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	AK311807|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	CR590876|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	NM_001175|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	L20688|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta
hg18_v1_chr1_+_36046373_36046442	0.0923966	SOX2.p2	AB046787|EIF2C4|192670|eukaryotic translation initiation factor 2C, 4	BC152450|EIF2C4|192670|eukaryotic translation initiation factor 2C, 4	NM_017629|EIF2C4|192670|eukaryotic translation initiation factor 2C, 4
hg18_v1_chr12_-_65359019_65359028	0.0923392	SOX2.p2	BC115393|GRIP1|23426|glutamate receptor interacting protein 1	BC115394|GRIP1|23426|glutamate receptor interacting protein 1	AK307576|GRIP1|23426|glutamate receptor interacting protein 1
hg18_v1_chr8_-_30826074_30826149	0.0921063	SOX2.p2	AF285605|TEX15|56154|testis expressed 15	NM_031271|TEX15|56154|testis expressed 15	BC140934|TEX15|56154|testis expressed 15
hg18_v1_chr5_-_180163495_180163541	0.092059	SOX2.p2	NM_001114619|MGAT1|4245|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase	NM_001114620|MGAT1|4245|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase	AK290769|MGAT1|4245|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase
hg18_v1_chr1_+_945472_945544	0.0920549	SOX2.p2	AF016903|AGRN|375790|agrin	U84406|AGRN|375790|agrin
hg18_v1_chr3_-_120861959_120862126	0.0918038	SOX2.p2	AF204173|POPDC2|64091|popeye domain containing 2	NM_022135|POPDC2|64091|popeye domain containing 2	AK314819|POPDC2|64091|popeye domain containing 2	BC044929|POPDC2|64091|popeye domain containing 2
hg18_v1_chr12_+_53177789_53177803	0.0916368	SOX2.p2	M58285|NCKAP1L|3071|NCK-associated protein 1-like
hg18_v1_chr4_-_153675602_153675886	0.0915759	SOX2.p2	BC117244|FBXW7|55294|F-box and WD repeat domain containing 7	BC117246|FBXW7|55294|F-box and WD repeat domain containing 7	BC143944|FBXW7|55294|F-box and WD repeat domain containing 7	NM_033632|FBXW7|55294|F-box and WD repeat domain containing 7	CR749305|FBXW7|55294|F-box and WD repeat domain containing 7
hg18_v1_chr4_-_91979113_91979291	0.0914776	SOX2.p2	CR596371|TMSL3|7117|thymosin-like 3	CR605307|TMSL3|7117|thymosin-like 3	CR624038|TMSL3|7117|thymosin-like 3	CR621963|TMSL3|7117|thymosin-like 3	NM_183049|TMSL3|7117|thymosin-like 3
hg18_v1_chr1_+_100088394_100088632	0.0914371	SOX2.p2	BC078663|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	NM_000028|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	NM_000643|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	NM_000644|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	U84008|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	U84009|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	U84010|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase
hg18_v1_chr11_+_737424_737427	0.0913791	SOX2.p2	BC010103|TALDO1|6888|transaldolase 1	BC009680|TALDO1|6888|transaldolase 1
hg18_v1_chr12_-_56432385_56432445	0.0913522	SOX2.p2	CR622282|CDK4|1019|cyclin-dependent kinase 4	BC005864|CDK4|1019|cyclin-dependent kinase 4	CR602927|CDK4|1019|cyclin-dependent kinase 4	AK310724|CDK4|1019|cyclin-dependent kinase 4	M14505|CDK4|1019|cyclin-dependent kinase 4	NM_000075|CDK4|1019|cyclin-dependent kinase 4
hg18_v1_chrX_+_44617346_44617414	0.0913121	SOX2.p2	NM_021140|KDM6A|7403|lysine (K)-specific demethylase 6A	AB208795|KDM6A|7403|lysine (K)-specific demethylase 6A
hg18_v1_chrX_-_52843112_52843112	0.0912783	SOX2.p2	NM_001009616|SPANXN5|494197|SPANX family, member N5
hg18_v1_chr7_+_149707338_149707382	0.0912747	SOX2.p2	NM_173680|ZNF775|285971|zinc finger protein 775	BC038111|ZNF775|285971|zinc finger protein 775
hg18_v1_chr11_+_100063061_100063616	0.0910351	SOX2.p2	NM_152432|ARHGAP42|143872|Rho GTPase activating protein 42
hg18_v1_chr2_-_178461710_178461711	0.0909041	SOX2.p2	AJ251509|PDE11A|50940|phosphodiesterase 11A	NM_001077196|PDE11A|50940|phosphodiesterase 11A
hg18_v1_chr6_+_45404031_45404037	0.0907182	SOX2.p2	NM_001015051|RUNX2|860|runt-related transcription factor 2	NM_001024630|RUNX2|860|runt-related transcription factor 2	AF053952|RUNX2|860|runt-related transcription factor 2
hg18_v1_chr16_+_24459173_24459557	0.0906461	SOX2.p2	AF063596|RBBP6|5930|retinoblastoma binding protein 6	BC101139|RBBP6|5930|retinoblastoma binding protein 6	BC101140|RBBP6|5930|retinoblastoma binding protein 6	BC101141|RBBP6|5930|retinoblastoma binding protein 6	BC101142|RBBP6|5930|retinoblastoma binding protein 6	BC114353|RBBP6|5930|retinoblastoma binding protein 6	BC114354|RBBP6|5930|retinoblastoma binding protein 6	BC118667|RBBP6|5930|retinoblastoma binding protein 6	BC139830|RBBP6|5930|retinoblastoma binding protein 6	BC029352|RBBP6|5930|retinoblastoma binding protein 6	BC063524|RBBP6|5930|retinoblastoma binding protein 6	AB112074|RBBP6|5930|retinoblastoma binding protein 6	AB112075|RBBP6|5930|retinoblastoma binding protein 6	BX648661|RBBP6|5930|retinoblastoma binding protein 6
hg18_v1_chr13_+_112349358_112349358	0.0905692	SOX2.p2	AK129953|C13orf35|400165|chromosome 13 open reading frame 35	NM_207440|C13orf35|400165|chromosome 13 open reading frame 35
hg18_v1_chr3_-_161765860_161765913	0.0904292	SOX2.p2	CR597383|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)	U93240|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)
hg18_v1_chr6_-_35804337_35804337	0.0903695	SOX2.p2	BC042605|FKBP5|2289|FK506 binding protein 5	NM_001145775|FKBP5|2289|FK506 binding protein 5
hg18_v1_chr11_+_75769984_75770159	0.0902925	SOX2.p2	BC040665|LOC387790|387790|hypothetical LOC387790	AK095089|LOC387790|387790|hypothetical LOC387790
hg18_v1_chr12_+_21417068_21417122	0.0901053	SOX2.p2	NM_000415|IAPP|3375|islet amyloid polypeptide	J04422|IAPP|3375|islet amyloid polypeptide	X14904|IAPP|3375|islet amyloid polypeptide
hg18_v1_chr20_-_10602139_10602269	0.0899628	SOX2.p2	U77720|JAG1|182|jagged 1	AK312722|JAG1|182|jagged 1
hg18_v1_chrX_-_138114846_138114881	0.0898129	SOX2.p2	AK303685|FGF13|2258|fibroblast growth factor 13	NM_001139498|FGF13|2258|fibroblast growth factor 13	NM_001139500|FGF13|2258|fibroblast growth factor 13	NM_001139501|FGF13|2258|fibroblast growth factor 13	AK297545|FGF13|2258|fibroblast growth factor 13
hg18_v1_chr21_-_18113514_18113589	0.0897562	SOX2.p2	AF239726|C21orf91|54149|chromosome 21 open reading frame 91	AK023825|C21orf91|54149|chromosome 21 open reading frame 91	AK225123|C21orf91|54149|chromosome 21 open reading frame 91	AK314471|C21orf91|54149|chromosome 21 open reading frame 91	CR749496|C21orf91|54149|chromosome 21 open reading frame 91	NM_001100420|C21orf91|54149|chromosome 21 open reading frame 91	NM_001100421|C21orf91|54149|chromosome 21 open reading frame 91	NM_017447|C21orf91|54149|chromosome 21 open reading frame 91
hg18_v1_chr3_-_120347571_120347604	0.0897544	SOX2.p2	AK097667|IGSF11|152404|immunoglobulin superfamily, member 11	NM_152538|IGSF11|152404|immunoglobulin superfamily, member 11	AK292387|IGSF11|152404|immunoglobulin superfamily, member 11
hg18_v1_chrX_+_70420221_70420233	0.0896928	SOX2.p2	L14599|NONO|4841|non-POU domain containing, octamer-binding	AK291140|NONO|4841|non-POU domain containing, octamer-binding	BC003129|NONO|4841|non-POU domain containing, octamer-binding	CR597886|NONO|4841|non-POU domain containing, octamer-binding	CR619917|NONO|4841|non-POU domain containing, octamer-binding
hg18_v1_chr1_+_190394214_190394390	0.0894956	SOX2.p2	NM_130782|RGS18|64407|regulator of G-protein signaling 18	AK292015|RGS18|64407|regulator of G-protein signaling 18	BC020632|RGS18|64407|regulator of G-protein signaling 18	AK057114|RGS18|64407|regulator of G-protein signaling 18	AK315377|RGS18|64407|regulator of G-protein signaling 18	AF268036|RGS18|64407|regulator of G-protein signaling 18	AF076642|RGS18|64407|regulator of G-protein signaling 18	CR602825|RGS18|64407|regulator of G-protein signaling 18	DQ891393|RGS18|64407|regulator of G-protein signaling 18	DQ894569|RGS18|64407|regulator of G-protein signaling 18
hg18_v1_chr5_+_96237923_96237965	0.0893861	SOX2.p2	AK312864|ERAP2|64167|endoplasmic reticulum aminopeptidase 2	AB109031|ERAP2|64167|endoplasmic reticulum aminopeptidase 2	AB163917|ERAP2|64167|endoplasmic reticulum aminopeptidase 2	BC065240|ERAP2|64167|endoplasmic reticulum aminopeptidase 2
hg18_v1_chr7_-_139825802_139825837	0.0892831	SOX2.p2	NM_001145125|MKRN1|23608|makorin ring finger protein 1	NM_013446|MKRN1|23608|makorin ring finger protein 1
hg18_v1_chr4_+_78297418_78297550	0.0892263	SOX2.p2	U47414|CCNG2|901|cyclin G2
hg18_v1_chr8_-_30060003_30060027	0.0892015	SOX2.p2	CR597672|TMEM66|51669|transmembrane protein 66	CR608849|TMEM66|51669|transmembrane protein 66	AF490252|TMEM66|51669|transmembrane protein 66	DQ892451|TMEM66|51669|transmembrane protein 66	DQ895663|TMEM66|51669|transmembrane protein 66	AF100748|TMEM66|51669|transmembrane protein 66	AK222632|TMEM66|51669|transmembrane protein 66	AK315956|TMEM66|51669|transmembrane protein 66
hg18_v1_chr17_-_36594652_36594672	0.0891833	SOX2.p2	BC103845|KRTAP4-1|85285|keratin associated protein 4-1	BC103846|KRTAP4-1|85285|keratin associated protein 4-1	AJ406942|KRTAP4-1|85285|keratin associated protein 4-1	NM_033060|KRTAP4-1|85285|keratin associated protein 4-1
hg18_v1_chrX_+_47999740_47999753	0.0891739	SOX2.p2	NM_005635|SSX1|6756|synovial sarcoma, X breakpoint 1	X86174|SSX1|6756|synovial sarcoma, X breakpoint 1	BC150487|SSX1|6756|synovial sarcoma, X breakpoint 1	BC001003|SSX1|6756|synovial sarcoma, X breakpoint 1	BC125151|SSX1|6756|synovial sarcoma, X breakpoint 1	BC133693|SSX1|6756|synovial sarcoma, X breakpoint 1	BC128611|SSX1|6756|synovial sarcoma, X breakpoint 1
hg18_v1_chr16_+_2503978_2503987	0.0891686	SOX2.p2	CR601237|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	CR599331|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	BC007389|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	BC004537|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c
hg18_v1_chr3_-_47180417_47180470	0.0889552	SOX2.p2	AK131371|SETD2|29072|SET domain containing 2	NM_014159|SETD2|29072|SET domain containing 2
hg18_v1_chr12_+_368774_368821	0.0888756	SOX2.p2	AK316029|CCDC77|84318|coiled-coil domain containing 77	NM_001130147|CCDC77|84318|coiled-coil domain containing 77	NM_001130148|CCDC77|84318|coiled-coil domain containing 77	AK308216|CCDC77|84318|coiled-coil domain containing 77
hg18_v1_chr9_-_115101140_115101140	0.0888002	SOX2.p2	BC013036|RNF183|138065|ring finger protein 183	NM_145051|RNF183|138065|ring finger protein 183
hg18_v1_chr1_+_210864411_210864438	0.0886933	SOX2.p2	AK301981|FAM71A|149647|family with sequence similarity 71, member A	NM_153606|FAM71A|149647|family with sequence similarity 71, member A	BC035007|FAM71A|149647|family with sequence similarity 71, member A
hg18_v1_chr6_+_84626083_84626112	0.0885727	SOX2.p2	NM_016230|CYB5R4|51167|cytochrome b5 reductase 4
hg18_v1_chr10_+_59764718_59764967	0.0885385	SOX2.p2	CR603407|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	CR617065|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	CR619802|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	NM_003338|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	CR594114|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	AK291901|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	BC005980|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	BC015997|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	CR620939|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	AF257220|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	AJ272367|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	X78140|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	DQ893111|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	DQ896385|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	BT007041|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)
hg18_v1_chr1_-_158161924_158161963	0.0883262	SOX2.p2	CR621820|TAGLN2|8407|transgelin 2	CR601283|TAGLN2|8407|transgelin 2
hg18_v1_chrX_+_41433169_41433254	0.0883115	SOX2.p2	AK027780|GPR34|2857|G protein-coupled receptor 34	NM_001097579|GPR34|2857|G protein-coupled receptor 34	NM_005300|GPR34|2857|G protein-coupled receptor 34	DQ106398|GPR34|2857|G protein-coupled receptor 34	CR603494|GPR34|2857|G protein-coupled receptor 34	DQ106400|GPR34|2857|G protein-coupled receptor 34	BC020678|GPR34|2857|G protein-coupled receptor 34	DQ106399|GPR34|2857|G protein-coupled receptor 34	CR609581|GPR34|2857|G protein-coupled receptor 34	DQ106401|GPR34|2857|G protein-coupled receptor 34	DQ106402|GPR34|2857|G protein-coupled receptor 34	AK075217|GPR34|2857|G protein-coupled receptor 34
hg18_v1_chr9_-_73715666_73715825	0.088144	SOX2.p2	AF151825|FAM108B1|51104|family with sequence similarity 108, member B1
hg18_v1_chr6_+_57062944_57062967	0.0878972	SOX2.p2	BC098382|ZNF451|26036|zinc finger protein 451	AK225806|ZNF451|26036|zinc finger protein 451	AB011148|ZNF451|26036|zinc finger protein 451
hg18_v1_chr12_+_109424387_109424530	0.0878914	SOX2.p2	AK124109|RAD9B|144715|RAD9 homolog B (S. pombe)	NM_152442|RAD9B|144715|RAD9 homolog B (S. pombe)	AK301826|RAD9B|144715|RAD9 homolog B (S. pombe)	BC037353|RAD9B|144715|RAD9 homolog B (S. pombe)	AK302512|RAD9B|144715|RAD9 homolog B (S. pombe)	AY297459|RAD9B|144715|RAD9 homolog B (S. pombe)	BC068031|RAD9B|144715|RAD9 homolog B (S. pombe)	BC047645|RAD9B|144715|RAD9 homolog B (S. pombe)	AK097665|RAD9B|144715|RAD9 homolog B (S. pombe)
hg18_v1_chr12_+_52132176_52132244	0.0878641	SOX2.p2	CR603638|PCBP2|5094|poly(rC) binding protein 2	BC035420|PCBP2|5094|poly(rC) binding protein 2	CR620547|PCBP2|5094|poly(rC) binding protein 2
hg18_v1_chr22_+_36422940_36422956	0.0877595	SOX2.p2	NM_001039141|TRIOBP|11078|TRIO and F-actin binding protein	AK096634|TRIOBP|11078|TRIO and F-actin binding protein
hg18_v1_chr11_+_737428_737440	0.0877447	SOX2.p2	L19437|TALDO1|6888|transaldolase 1	NM_006755|TALDO1|6888|transaldolase 1
hg18_v1_chr16_-_10696285_10696302	0.0873898	SOX2.p2	BC130336|TEKT5|146279|tektin 5	BC130338|TEKT5|146279|tektin 5	AK057433|TEKT5|146279|tektin 5	NM_144674|TEKT5|146279|tektin 5
hg18_v1_chr8_+_126511739_126511783	0.0873775	SOX2.p2	BC063292|TRIB1|10221|tribbles homolog 1 (Drosophila)	NM_025195|TRIB1|10221|tribbles homolog 1 (Drosophila)
hg18_v1_chr21_-_30893063_30893091	0.087373	SOX2.p2	NM_181604|KRTAP6-2|337967|keratin associated protein 6-2	AB096952|KRTAP6-2|337967|keratin associated protein 6-2
hg18_v1_chr20_-_44151971_44152065	0.087214	SOX2.p2	NM_020967|NCOA5|57727|nuclear receptor coactivator 5
hg18_v1_chr6_-_47361921_47361962	0.0872085	SOX2.p2	BC010241|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg18_v1_chr1_-_68688219_68688229	0.0870613	SOX2.p2	AK289925|RPE65|6121|retinal pigment epithelium-specific protein 65kDa	BC075035|RPE65|6121|retinal pigment epithelium-specific protein 65kDa	BC075036|RPE65|6121|retinal pigment epithelium-specific protein 65kDa	NM_000329|RPE65|6121|retinal pigment epithelium-specific protein 65kDa	U18991|RPE65|6121|retinal pigment epithelium-specific protein 65kDa
hg18_v1_chr14_+_19458580_19458605	0.0869744	SOX2.p2	BC140947|OR4K5|79317|olfactory receptor, family 4, subfamily K, member 5	NM_001005483|OR4K5|79317|olfactory receptor, family 4, subfamily K, member 5
hg18_v1_chr3_-_47798423_47798599	0.0868749	SOX2.p2	AK302541|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
hg18_v1_chr10_+_11247467_11247530	0.0868468	SOX2.p2	AK295511|CELF2|10659|CUGBP, Elav-like family member 2
hg18_v1_chr1_+_12757570_12757570	0.0868201	SOX2.p2	NM_001080830|PRAMEF12|390999|PRAME family member 12
hg18_v1_chr17_-_70039107_70039169	0.0867565	SOX2.p2	AF427618|CD300LB|124599|CD300 molecule-like family member b	AY359025|CD300LB|124599|CD300 molecule-like family member b	AY646929|CD300LB|124599|CD300 molecule-like family member b
hg18_v1_chr6_+_84626113_84626129	0.0866619	SOX2.p2	AK313146|CYB5R4|51167|cytochrome b5 reductase 4	BC025380|CYB5R4|51167|cytochrome b5 reductase 4	AL832113|CYB5R4|51167|cytochrome b5 reductase 4
hg18_v1_chr6_+_57062974_57063009	0.0865999	SOX2.p2	EU832452|ZNF451|26036|zinc finger protein 451	EU832534|ZNF451|26036|zinc finger protein 451
hg18_v1_chr1_-_230945065_230945095	0.0865959	SOX2.p2	
hg18_v1_chrX_-_135790535_135790588	0.0865017	SOX2.p2	CR607658|RBMX|27316|RNA binding motif protein, X-linked	BC006550|RBMX|27316|RNA binding motif protein, X-linked	BC007435|RBMX|27316|RNA binding motif protein, X-linked	CR616933|RBMX|27316|RNA binding motif protein, X-linked	BX647131|RBMX|27316|RNA binding motif protein, X-linked	AK091520|RBMX|27316|RNA binding motif protein, X-linked	AK096015|RBMX|27316|RNA binding motif protein, X-linked	AK304573|RBMX|27316|RNA binding motif protein, X-linked	AK304868|RBMX|27316|RNA binding motif protein, X-linked	AK309911|RBMX|27316|RNA binding motif protein, X-linked	CR599705|RBMX|27316|RNA binding motif protein, X-linked
hg18_v1_chr11_+_10787328_10787419	0.0864146	SOX2.p2	
hg18_v1_chr9_+_114289178_114289289	0.0861538	SOX2.p2	BC105048|KIAA1958|158405|KIAA1958	BC113515|KIAA1958|158405|KIAA1958	BC143372|KIAA1958|158405|KIAA1958	BC143424|KIAA1958|158405|KIAA1958
hg18_v1_chr2_+_114390975_114390991	0.08605	SOX2.p2	AB209353|ACTR3|10096|ARP3 actin-related protein 3 homolog (yeast)
hg18_v1_chr1_-_45924770_45924888	0.0860341	SOX2.p2	BC068578|GPBP1L1|60313|GC-rich promoter binding protein 1-like 1	NM_021639|GPBP1L1|60313|GC-rich promoter binding protein 1-like 1
hg18_v1_chrX_+_135057202_135057397	0.0859311	SOX2.p2	NM_001159702|FHL1|2273|four and a half LIM domains 1	NM_001159703|FHL1|2273|four and a half LIM domains 1	NM_001449|FHL1|2273|four and a half LIM domains 1	BC010998|FHL1|2273|four and a half LIM domains 1	AK297124|FHL1|2273|four and a half LIM domains 1	AK091702|FHL1|2273|four and a half LIM domains 1	AK300966|FHL1|2273|four and a half LIM domains 1	AK094024|FHL1|2273|four and a half LIM domains 1
hg18_v1_chr1_-_114855281_114855321	0.0859252	SOX2.p2	AF119043|TRIM33|51592|tripartite motif containing 33	AF220136|TRIM33|51592|tripartite motif containing 33	AF220137|TRIM33|51592|tripartite motif containing 33	NM_015906|TRIM33|51592|tripartite motif containing 33	NM_033020|TRIM33|51592|tripartite motif containing 33
hg18_v1_chr1_-_53010929_53010933	0.0858321	SOX2.p2	
hg18_v1_chr9_-_101621964_101622008	0.0858099	SOX2.p2	
hg18_v1_chr7_+_143457083_143457138	0.0858092	SOX2.p2	BC136889|OR2A14|135941|olfactory receptor, family 2, subfamily A, member 14	NM_001001659|OR2A14|135941|olfactory receptor, family 2, subfamily A, member 14
hg18_v1_chr7_+_44754700_44754715	0.0857737	SOX2.p2	BC110435|ZMIZ2|83637|zinc finger, MIZ-type containing 2
hg18_v1_chr10_+_35524835_35524959	0.0857378	SOX2.p2	AK289379|CREM|1390|cAMP responsive element modulator	NM_182721|CREM|1390|cAMP responsive element modulator	NM_182722|CREM|1390|cAMP responsive element modulator	NM_182723|CREM|1390|cAMP responsive element modulator	NM_182724|CREM|1390|cAMP responsive element modulator	NM_182725|CREM|1390|cAMP responsive element modulator	AK291566|CREM|1390|cAMP responsive element modulator	CR614277|CREM|1390|cAMP responsive element modulator
hg18_v1_chr3_+_138132006_138132048	0.0856207	SOX2.p2	NM_001190796|NCK1|4690|NCK adaptor protein 1	AK301460|NCK1|4690|NCK adaptor protein 1
hg18_v1_chr17_+_71065478_71065482	0.0855725	SOX2.p2	AK126687|LLGL2|3993|lethal giant larvae homolog 2 (Drosophila)
hg18_v1_chr9_-_97308687_97308702	0.085491	SOX2.p2	AB209495|PTCH1|5727|patched 1	AB233424|PTCH1|5727|patched 1
hg18_v1_chr5_-_137116746_137116859	0.0853933	SOX2.p2	CR625349|HNRNPA0|10949|heterogeneous nuclear ribonucleoprotein A0	CR622742|HNRNPA0|10949|heterogeneous nuclear ribonucleoprotein A0	BC012490|HNRNPA0|10949|heterogeneous nuclear ribonucleoprotein A0
hg18_v1_chr15_+_20444124_20444136	0.0853066	SOX2.p2	NM_014608|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1
hg18_v1_chr2_+_99344060_99344285	0.0852573	SOX2.p2	AL133563|EIF5B|9669|eukaryotic translation initiation factor 5B	CR604527|EIF5B|9669|eukaryotic translation initiation factor 5B
hg18_v1_chr18_+_59521173_59521173	0.085042	SOX2.p2	AK292775|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)	AK296705|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)	AK309537|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)	AK309970|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)	NM_080475|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)
hg18_v1_chr1_+_15883403_15883418	0.0849018	SOX2.p2	BC040441|PLEKHM2|23207|pleckstrin homology domain containing, family M (with RUN domain) member 2	NM_015164|PLEKHM2|23207|pleckstrin homology domain containing, family M (with RUN domain) member 2
hg18_v1_chr22_-_43272567_43272997	0.084892	SOX2.p2	BC030232|LDOC1L|84247|leucine zipper, down-regulated in cancer 1-like	NM_032287|LDOC1L|84247|leucine zipper, down-regulated in cancer 1-like	AK296479|LDOC1L|84247|leucine zipper, down-regulated in cancer 1-like
hg18_v1_chr1_+_151456683_151456683	0.0847176	SOX2.p2	NM_001195571|PRR9|574414|proline rich 9
hg18_v1_chr9_+_35032222_35032262	0.0846166	SOX2.p2	NM_001040410|C9orf131|138724|chromosome 9 open reading frame 131	NM_203299|C9orf131|138724|chromosome 9 open reading frame 131	BC045643|C9orf131|138724|chromosome 9 open reading frame 131	AK097595|C9orf131|138724|chromosome 9 open reading frame 131	AK302123|C9orf131|138724|chromosome 9 open reading frame 131
hg18_v1_chr12_-_100979869_100979891	0.0844574	SOX2.p2	CR457171|CCDC53|51019|coiled-coil domain containing 53	CR609797|CCDC53|51019|coiled-coil domain containing 53
hg18_v1_chr9_-_113561613_113561633	0.0844539	SOX2.p2	BC041858|C9orf84|158401|chromosome 9 open reading frame 84	AK126055|C9orf84|158401|chromosome 9 open reading frame 84	NM_001080551|C9orf84|158401|chromosome 9 open reading frame 84
hg18_v1_chr1_+_36520751_36520823	0.0843683	SOX2.p2	EU446755|THRAP3|9967|thyroid hormone receptor associated protein 3
hg18_v1_chr3_+_186786655_186786900	0.0842111	SOX2.p2	AK304402|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2	AF151697|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2	NM_021627|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2	AK296772|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2	AK027599|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2	AK296744|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2	BC040609|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2	AL834380|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2
hg18_v1_chr17_+_60563963_60564120	0.0841917	SOX2.p2	AK309061|RGS9|8787|regulator of G-protein signaling 9	CR613211|RGS9|8787|regulator of G-protein signaling 9	AK290535|RGS9|8787|regulator of G-protein signaling 9	BC022504|RGS9|8787|regulator of G-protein signaling 9	AK301719|RGS9|8787|regulator of G-protein signaling 9	AF071476|RGS9|8787|regulator of G-protein signaling 9	AK289876|RGS9|8787|regulator of G-protein signaling 9	AF493933|RGS9|8787|regulator of G-protein signaling 9	AY585191|RGS9|8787|regulator of G-protein signaling 9
hg18_v1_chr19_+_63482118_63482258	0.0841458	SOX2.p2	AK093110|ZNF8|7554|zinc finger protein 8	NM_021089|ZNF8|7554|zinc finger protein 8	AK225825|ZNF8|7554|zinc finger protein 8	AK299716|ZNF8|7554|zinc finger protein 8	BC039323|ZNF8|7554|zinc finger protein 8	EU446717|ZNF8|7554|zinc finger protein 8
hg18_v1_chr9_-_139564656_139564806	0.0841381	SOX2.p2	AK125060|PNPLA7|375775|patatin-like phospholipase domain containing 7	AK126267|PNPLA7|375775|patatin-like phospholipase domain containing 7	NM_001098537|PNPLA7|375775|patatin-like phospholipase domain containing 7	NM_152286|PNPLA7|375775|patatin-like phospholipase domain containing 7
hg18_v1_chr6_+_64340388_64340401	0.0841178	SOX2.p2	AK312526|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1
hg18_v1_chr7_-_122985060_122985193	0.0839176	SOX2.p2	CR933664|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa	BT006695|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa	AK022209|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa	CR606314|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa	BC020821|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa	BC070236|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa	BC070237|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa	U64028|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa	AK315458|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa	U53468|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa	BC000813|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa	NM_005000|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa
hg18_v1_chr19_+_48792574_48792627	0.0837513	SOX2.p2	NM_001145347|ZNF576|79177|zinc finger protein 576	CR621953|ZNF576|79177|zinc finger protein 576	BC002981|ZNF576|79177|zinc finger protein 576
hg18_v1_chr1_-_43196911_43197107	0.083557	SOX2.p2	BC118590|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1	BC121804|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1	K03195|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1
hg18_v1_chr3_+_184453907_184454037	0.0835422	SOX2.p2	AB209517|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
hg18_v1_chrX_+_41077594_41077594	0.0834848	SOX2.p2	AF000982|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AF000983|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	NM_001193416|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	NM_001193417|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	NM_001356|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked
hg18_v1_chr7_-_129632452_129632573	0.0834517	SOX2.p2	AK027678|TMEM209|84928|transmembrane protein 209	BC057784|TMEM209|84928|transmembrane protein 209	AK027709|TMEM209|84928|transmembrane protein 209	BC045618|TMEM209|84928|transmembrane protein 209	AK074732|TMEM209|84928|transmembrane protein 209	NM_032842|TMEM209|84928|transmembrane protein 209
hg18_v1_chr2_-_98646367_98646367	0.0834397	SOX2.p2	AK304393|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A	AK309852|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A	NM_001160154|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A
hg18_v1_chr12_+_16391795_16391978	0.0832994	SOX2.p2	NM_020300|MGST1|4257|microsomal glutathione S-transferase 1	CR618561|MGST1|4257|microsomal glutathione S-transferase 1	CR609242|MGST1|4257|microsomal glutathione S-transferase 1	AK291148|MGST1|4257|microsomal glutathione S-transferase 1	AK309707|MGST1|4257|microsomal glutathione S-transferase 1	BC005923|MGST1|4257|microsomal glutathione S-transferase 1	BC056863|MGST1|4257|microsomal glutathione S-transferase 1	NM_145791|MGST1|4257|microsomal glutathione S-transferase 1
hg18_v1_chr8_-_102872372_102872380	0.0832083	SOX2.p2	AK055073|NCALD|83988|neurocalcin delta	AK314523|NCALD|83988|neurocalcin delta
hg18_v1_chr21_+_43903803_43903969	0.0831623	SOX2.p2	BC028386|RRP1B|23076|ribosomal RNA processing 1 homolog B (S. cerevisiae)	NM_015056|RRP1B|23076|ribosomal RNA processing 1 homolog B (S. cerevisiae)	BC014005|RRP1B|23076|ribosomal RNA processing 1 homolog B (S. cerevisiae)	AK056263|RRP1B|23076|ribosomal RNA processing 1 homolog B (S. cerevisiae)	D80001|RRP1B|23076|ribosomal RNA processing 1 homolog B (S. cerevisiae)
hg18_v1_chr3_-_47798337_47798339	0.0829761	SOX2.p2	BC050564|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
hg18_v1_chr11_+_62231741_62231882	0.0829114	SOX2.p2	AK311933|GNG3|2785|guanine nucleotide binding protein (G protein), gamma 3	BC015563|GNG3|2785|guanine nucleotide binding protein (G protein), gamma 3	CR625883|GNG3|2785|guanine nucleotide binding protein (G protein), gamma 3	CR620191|GNG3|2785|guanine nucleotide binding protein (G protein), gamma 3
hg18_v1_chr1_+_109827975_109828164	0.0828537	SOX2.p2	BC036849|ATXN7L2|127002|ataxin 7-like 2	NM_153340|ATXN7L2|127002|ataxin 7-like 2
hg18_v1_chrX_-_13745108_13745124	0.0827635	SOX2.p2	AK299675|GPM6B|2824|glycoprotein M6B	BC047295|GPM6B|2824|glycoprotein M6B
hg18_v1_chr20_-_10602429_10602710	0.0826989	SOX2.p2	BC126205|JAG1|182|jagged 1	BC126207|JAG1|182|jagged 1	AF028593|JAG1|182|jagged 1	U61276|JAG1|182|jagged 1	U73936|JAG1|182|jagged 1	BC098393|JAG1|182|jagged 1	BC028007|JAG1|182|jagged 1	AF003837|JAG1|182|jagged 1	NM_000214|JAG1|182|jagged 1
hg18_v1_chr4_+_41678469_41678596	0.082629	SOX2.p2	NM_001029955|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1	BC052943|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1	BC104224|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1	BC104225|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1	AK122914|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1	BC035027|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1
hg18_v1_chr19_-_16998449_16998632	0.0825729	SOX2.p2	AB033109|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8	AY101765|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8	BC067854|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8	NM_015692|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8
hg18_v1_chr17_-_36719030_36719030	0.0824847	SOX2.p2	NM_001146182|KRTAP16-1|100288060|keratin associated protein 16-1
hg18_v1_chr7_+_73506172_73506316	0.082366	SOX2.p2	AY648295|GTF2IRD1|9569|GTF2I repeat domain containing 1	BC018136|GTF2IRD1|9569|GTF2I repeat domain containing 1
hg18_v1_chr15_-_86890796_86890915	0.0821006	SOX2.p2	BC109060|DET1|55070|de-etiolated homolog 1 (Arabidopsis)	BC109061|DET1|55070|de-etiolated homolog 1 (Arabidopsis)	BC073867|DET1|55070|de-etiolated homolog 1 (Arabidopsis)	AK054603|DET1|55070|de-etiolated homolog 1 (Arabidopsis)	BC064591|DET1|55070|de-etiolated homolog 1 (Arabidopsis)	AB073887|DET1|55070|de-etiolated homolog 1 (Arabidopsis)	NM_001144074|DET1|55070|de-etiolated homolog 1 (Arabidopsis)	NM_017996|DET1|55070|de-etiolated homolog 1 (Arabidopsis)
hg18_v1_chr20_-_39199936_39200109	0.0819642	SOX2.p2	
hg18_v1_chr10_+_11247243_11247259	0.0817368	SOX2.p2	AK316354|CELF2|10659|CUGBP, Elav-like family member 2
hg18_v1_chr22_-_37480898_37480961	0.0816992	SOX2.p2	AK304188|SUN2|25777|Sad1 and UNC84 domain containing 2	AK295787|SUN2|25777|Sad1 and UNC84 domain containing 2
hg18_v1_chrX_-_138114100_138114173	0.0816987	SOX2.p2	AF108756|FGF13|2258|fibroblast growth factor 13	AK316170|FGF13|2258|fibroblast growth factor 13
hg18_v1_chr1_-_26105477_26105579	0.0816979	SOX2.p2	BC082228|STMN1|3925|stathmin 1	AB209282|STMN1|3925|stathmin 1	X53305|STMN1|3925|stathmin 1	BX647885|STMN1|3925|stathmin 1	Z11566|STMN1|3925|stathmin 1	AK303692|STMN1|3925|stathmin 1	AK054594|STMN1|3925|stathmin 1	AK311801|STMN1|3925|stathmin 1	D28428|STMN1|3925|stathmin 1	J04991|STMN1|3925|stathmin 1	CR622594|STMN1|3925|stathmin 1	BC014353|STMN1|3925|stathmin 1	NM_001145454|STMN1|3925|stathmin 1	NM_005563|STMN1|3925|stathmin 1
hg18_v1_chr1_-_3556420_3556530	0.0816222	SOX2.p2	CR626114|WDR8|49856|WD repeat domain 8	CR619231|WDR8|49856|WD repeat domain 8	CR605005|WDR8|49856|WD repeat domain 8	AB034912|WDR8|49856|WD repeat domain 8	CR597189|WDR8|49856|WD repeat domain 8	AK000437|WDR8|49856|WD repeat domain 8	AK225525|WDR8|49856|WD repeat domain 8	BC002611|WDR8|49856|WD repeat domain 8	BC086311|WDR8|49856|WD repeat domain 8	CR613845|WDR8|49856|WD repeat domain 8	CR599166|WDR8|49856|WD repeat domain 8	CR596816|WDR8|49856|WD repeat domain 8	AK302397|WDR8|49856|WD repeat domain 8	NM_017818|WDR8|49856|WD repeat domain 8
hg18_v1_chr20_+_17622319_17622319	0.081574	SOX2.p2	NM_001159495|BANF2|140836|barrier to autointegration factor 2
hg18_v1_chr3_+_42952855_42952887	0.0815313	SOX2.p2	BC062786|KRBOX1|100506243|KRAB box domain containing 1	AK130974|KRBOX1|100506243|KRAB box domain containing 1
hg18_v1_chr21_+_42583259_42583306	0.0814762	SOX2.p2	AF038175|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1
hg18_v1_chrX_-_142432884_142432972	0.0814696	SOX2.p2	DQ336128|SPANXN3|139067|SPANX family, member N3	DQ336129|SPANXN3|139067|SPANX family, member N3	BC062750|SPANXN3|139067|SPANX family, member N3	NM_001009609|SPANXN3|139067|SPANX family, member N3
hg18_v1_chr19_+_10626106_10626230	0.0814226	SOX2.p2	AF141870|ILF3|3609|interleukin enhancer binding factor 3, 90kDa
hg18_v1_chr1_-_244647333_244647336	0.0813881	SOX2.p2	AK024733|SMYD3|64754|SET and MYND domain containing 3	NM_022743|SMYD3|64754|SET and MYND domain containing 3
hg18_v1_chr4_-_100070808_100070810	0.0813595	SOX2.p2	NM_001130679|EIF4E|1977|eukaryotic translation initiation factor 4E	NM_001968|EIF4E|1977|eukaryotic translation initiation factor 4E	BC035166|EIF4E|1977|eukaryotic translation initiation factor 4E
hg18_v1_chr11_-_82460531_82460560	0.0813559	SOX2.p2	BC014213|RAB30|27314|RAB30, member RAS oncogene family	NM_014488|RAB30|27314|RAB30, member RAS oncogene family	BX641138|RAB30|27314|RAB30, member RAS oncogene family
hg18_v1_chr10_+_69314944_69314966	0.0812637	SOX2.p2	AK289743|SIRT1|23411|sirtuin 1	NM_001142498|SIRT1|23411|sirtuin 1
hg18_v1_chr12_-_56432292_56432374	0.0812458	SOX2.p2	U79269|CDK4|1019|cyclin-dependent kinase 4	AK313701|CDK4|1019|cyclin-dependent kinase 4	CR591116|CDK4|1019|cyclin-dependent kinase 4	Z48970|CDK4|1019|cyclin-dependent kinase 4	BC003644|CDK4|1019|cyclin-dependent kinase 4	CR598582|CDK4|1019|cyclin-dependent kinase 4	BC010153|CDK4|1019|cyclin-dependent kinase 4	CR590586|CDK4|1019|cyclin-dependent kinase 4	CR616342|CDK4|1019|cyclin-dependent kinase 4	CR608247|CDK4|1019|cyclin-dependent kinase 4	CR594194|CDK4|1019|cyclin-dependent kinase 4
hg18_v1_chr3_+_184454286_184454314	0.0811602	SOX2.p2	AK091474|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
hg18_v1_chr19_+_12941431_12941474	0.0808976	SOX2.p2	AK095926|DAND5|199699|DAN domain family, member 5	NM_152654|DAND5|199699|DAN domain family, member 5	BC101800|DAND5|199699|DAN domain family, member 5	BC113476|DAND5|199699|DAN domain family, member 5	AB070695|DAND5|199699|DAN domain family, member 5
hg18_v1_chr5_-_147996769_147996816	0.0808857	SOX2.p2	AJ633645|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	AM712912|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	Y10437|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	Y13584|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	AJ011371|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	BC095497|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	Y09586|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	AJ131725|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	AJ131726|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	AJ278979|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	AJ278980|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	AJ278981|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	AJ278982|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	Y08756|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	Y12505|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	Y12506|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	Y12507|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	AJ519673|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	BC074755|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	NM_001040169|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	NM_001040172|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	NM_001040173|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	NM_199453|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4
hg18_v1_chr16_-_67723511_67723562	0.080871	SOX2.p2	NM_001040146|CHTF8|54921|CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae)
hg18_v1_chr6_-_53034547_53034642	0.0808527	SOX2.p2	NM_014920|ICK|22858|intestinal cell (MAK-like) kinase	NM_016513|ICK|22858|intestinal cell (MAK-like) kinase
hg18_v1_chr12_-_61283474_61283480	0.0808154	SOX2.p2	BC136288|C12orf61|283416|chromosome 12 open reading frame 61	AK098456|C12orf61|283416|chromosome 12 open reading frame 61	NM_175895|C12orf61|283416|chromosome 12 open reading frame 61
hg18_v1_chr4_+_159909626_159909631	0.0807598	SOX2.p2	NM_020840|FNIP2|57600|folliculin interacting protein 2
hg18_v1_chr12_-_120218857_120218924	0.0806276	SOX2.p2	BC026060|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta	AF140507|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta	AF425668|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta	AK300865|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta
hg18_v1_chr8_-_72436519_72436560	0.0805399	SOX2.p2	AK127798|EYA1|2138|eyes absent homolog 1 (Drosophila)	AK295897|EYA1|2138|eyes absent homolog 1 (Drosophila)
hg18_v1_chr18_+_21967813_21967880	0.0804068	SOX2.p2	BC042820|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	NM_001025096|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	NM_001025097|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	NM_144662|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	BC025393|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	BC028371|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	BC028686|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	BC025389|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	BC047355|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	BC021713|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8
hg18_v1_chr17_-_23903772_23903786	0.0803775	SOX2.p2	NM_005148|UNC119|9094|unc-119 homolog (C. elegans)	NM_054035|UNC119|9094|unc-119 homolog (C. elegans)	CR613554|UNC119|9094|unc-119 homolog (C. elegans)	CR600663|UNC119|9094|unc-119 homolog (C. elegans)
hg18_v1_chr3_-_47798341_47798346	0.0803545	SOX2.p2	BC021862|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
hg18_v1_chr21_+_38550533_38550533	0.0803498	SOX2.p2	BC013327|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15	NM_002243|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15
hg18_v1_chr16_-_56886380_56886451	0.0803299	SOX2.p2	AK302175|PRSS54|221191|protease, serine, 54	AK058068|PRSS54|221191|protease, serine, 54	BC057843|PRSS54|221191|protease, serine, 54	NM_001080492|PRSS54|221191|protease, serine, 54
hg18_v1_chr21_-_30908093_30908119	0.0803161	SOX2.p2	NM_181602|KRTAP6-1|337966|keratin associated protein 6-1	AB096954|KRTAP6-1|337966|keratin associated protein 6-1
hg18_v1_chr6_-_53517466_53517487	0.0803099	SOX2.p2	BC039894|GCLC|2729|glutamate-cysteine ligase, catalytic subunit	M90656|GCLC|2729|glutamate-cysteine ligase, catalytic subunit
hg18_v1_chr1_-_148507779_148508023	0.080214	SOX2.p2	CR601650|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AF508787|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AY113698|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AY113699|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AF151835|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK075295|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR594321|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR594282|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR596144|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR626054|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR626622|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	BC017699|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR613868|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR626391|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR609960|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR626805|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR597912|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR610823|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR603099|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR591331|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	BC008732|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	BC001230|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	BC015568|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK297680|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK298876|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK027879|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK314490|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR612872|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR605320|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR609243|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR618014|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR607278|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	BC020590|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	BC009501|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR609659|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)
hg18_v1_chr1_+_28134090_28134207	0.0801498	SOX2.p2	NM_001009568|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B	NM_014474|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B	AK301349|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B	CR613549|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B	AK293566|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B	AK316500|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B	BC014444|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B	Y08134|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B	AK293489|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B
hg18_v1_chr3_-_47798381_47798382	0.0799722	SOX2.p2	BC032564|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
hg18_v1_chr1_-_45760115_45760195	0.0797576	SOX2.p2	CR620467|PRDX1|5052|peroxiredoxin 1	CR595111|PRDX1|5052|peroxiredoxin 1	CR592546|PRDX1|5052|peroxiredoxin 1	CR612185|PRDX1|5052|peroxiredoxin 1	X67951|PRDX1|5052|peroxiredoxin 1	L19184|PRDX1|5052|peroxiredoxin 1	AK311898|PRDX1|5052|peroxiredoxin 1	BC007063|PRDX1|5052|peroxiredoxin 1	AK131049|PRDX1|5052|peroxiredoxin 1	BC021683|PRDX1|5052|peroxiredoxin 1	NM_002574|PRDX1|5052|peroxiredoxin 1	NM_181696|PRDX1|5052|peroxiredoxin 1	NM_181697|PRDX1|5052|peroxiredoxin 1
hg18_v1_chr7_-_148212230_148212291	0.079469	SOX2.p2	X95653|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	U61145|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	AK092676|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)
hg18_v1_chrX_+_15428820_15428960	0.0794228	SOX2.p2	NM_203281|BMX|660|BMX non-receptor tyrosine kinase	AK291824|BMX|660|BMX non-receptor tyrosine kinase	AK313568|BMX|660|BMX non-receptor tyrosine kinase	X83107|BMX|660|BMX non-receptor tyrosine kinase
hg18_v1_chr5_+_78567604_78567690	0.0794139	SOX2.p2	NM_152405|JMY|133746|junction mediating and regulatory protein, p53 cofactor
hg18_v1_chr11_+_5925152_5925152	0.0792822	SOX2.p2	NM_001003443|OR56A3|390083|olfactory receptor, family 56, subfamily A, member 3
hg18_v1_chr4_-_76868581_76868818	0.0792702	SOX2.p2	
hg18_v1_chr12_+_53177806_53177812	0.0791519	SOX2.p2	BC093769|NCKAP1L|3071|NCK-associated protein 1-like	BC093771|NCKAP1L|3071|NCK-associated protein 1-like	BC143355|NCKAP1L|3071|NCK-associated protein 1-like
hg18_v1_chr20_-_57940567_57940603	0.0790991	SOX2.p2	BC132864|SYCP2|10388|synaptonemal complex protein 2	BC132870|SYCP2|10388|synaptonemal complex protein 2	NM_014258|SYCP2|10388|synaptonemal complex protein 2
hg18_v1_chr15_+_90815910_90815910	0.0790324	SOX2.p2	AK057393|C15orf32|145858|chromosome 15 open reading frame 32	NM_153040|C15orf32|145858|chromosome 15 open reading frame 32
hg18_v1_chr3_-_127810087_127810087	0.0789941	SOX2.p2	AB113648|TXNRD3IT1|645840|thioredoxin reductase 3 intronic transcript 1	NM_001039783|TXNRD3IT1|645840|thioredoxin reductase 3 intronic transcript 1
hg18_v1_chr10_+_105717459_105717495	0.0789207	SOX2.p2	AF273048|SLK|9748|STE20-like kinase	NM_014720|SLK|9748|STE20-like kinase	BC111565|SLK|9748|STE20-like kinase	BC008697|SLK|9748|STE20-like kinase
hg18_v1_chr7_-_143230096_143230300	0.078911	SOX2.p2	AB018281|FAM115A|9747|family with sequence similarity 115, member A	NM_014719|FAM115A|9747|family with sequence similarity 115, member A	BC000609|FAM115A|9747|family with sequence similarity 115, member A	AK291605|FAM115A|9747|family with sequence similarity 115, member A	AK001640|FAM115A|9747|family with sequence similarity 115, member A
hg18_v1_chr3_+_43303005_43303141	0.0787896	SOX2.p2	AK291360|SNRK|54861|SNF related kinase	NM_001100594|SNRK|54861|SNF related kinase	NM_017719|SNRK|54861|SNF related kinase	BC071567|SNRK|54861|SNF related kinase	AK295187|SNRK|54861|SNF related kinase	CR749621|SNRK|54861|SNF related kinase	AK314376|SNRK|54861|SNF related kinase
hg18_v1_chr2_-_176656935_176656935	0.0787283	SOX2.p2	NM_001080458|EVX2|344191|even-skipped homeobox 2
hg18_v1_chr12_-_131882616_131882644	0.0786886	SOX2.p2	
hg18_v1_chr3_-_137395966_137395999	0.0786357	SOX2.p2	AK302491|MSL2|55167|male-specific lethal 2 homolog (Drosophila)	NM_001145417|MSL2|55167|male-specific lethal 2 homolog (Drosophila)
hg18_v1_chr21_+_38550739_38550860	0.078598	SOX2.p2	D87291|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15	NM_170736|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15	AK292812|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15
hg18_v1_chr1_-_150564302_150564302	0.0784373	SOX2.p2	L01090|FLG|2312|filaggrin	NM_002016|FLG|2312|filaggrin
hg18_v1_chr10_-_104943000_104943074	0.0783963	SOX2.p2	BX648078|NT5C2|22978|5'-nucleotidase, cytosolic II	BC001595|NT5C2|22978|5'-nucleotidase, cytosolic II	AK127670|NT5C2|22978|5'-nucleotidase, cytosolic II	AK291667|NT5C2|22978|5'-nucleotidase, cytosolic II	AK312517|NT5C2|22978|5'-nucleotidase, cytosolic II	D38524|NT5C2|22978|5'-nucleotidase, cytosolic II	NM_001134373|NT5C2|22978|5'-nucleotidase, cytosolic II	NM_012229|NT5C2|22978|5'-nucleotidase, cytosolic II
hg18_v1_chr3_+_9451506_9451527	0.0783344	SOX2.p2	
hg18_v1_chr9_-_138778780_138778785	0.0781489	SOX2.p2	BC093893|LCN15|389812|lipocalin 15	BC093895|LCN15|389812|lipocalin 15	AY358618|LCN15|389812|lipocalin 15	NM_203347|LCN15|389812|lipocalin 15
hg18_v1_chr3_-_46761248_46761248	0.0781402	SOX2.p2	BC133695|PRSS45|377047|protease, serine, 45	NM_199183|PRSS45|377047|protease, serine, 45
hg18_v1_chr10_-_135290288_135290288	0.0777529	SOX2.p2	AY714545|FRG2|448831|FSHD region gene 2	AY744466|FRG2B|441581|FSHD region gene 2 family, member B	NM_001080998|FRG2B|441581|FSHD region gene 2 family, member B
hg18_v1_chr3_+_14419087_14419153	0.0777184	SOX2.p2	NM_001134367|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	NM_001134368|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	NM_003043|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	AK308417|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	BC111489|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	AK307284|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	AK309534|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	BC137128|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	BC137129|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	BC144490|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	BC006252|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	AB209172|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6
hg18_v1_chr17_-_77092831_77093213	0.0776396	SOX2.p2	CR605043|ACTG1|71|actin, gamma 1	BC009544|ACTG1|71|actin, gamma 1	CR601487|ACTG1|71|actin, gamma 1	BC010417|ACTG1|71|actin, gamma 1	CR597730|ACTG1|71|actin, gamma 1	CR602295|ACTG1|71|actin, gamma 1	CR593879|ACTG1|71|actin, gamma 1	BC018861|ACTG1|71|actin, gamma 1	CR599045|ACTG1|71|actin, gamma 1	CR604282|ACTG1|71|actin, gamma 1	M16247|ACTG1|71|actin, gamma 1	CR590345|ACTG1|71|actin, gamma 1
hg18_v1_chr12_-_106679054_106679209	0.0775091	SOX2.p2	BC068562|PRDM4|11108|PR domain containing 4
hg18_v1_chr12_-_23995109_23995133	0.0774533	SOX2.p2	AK299607|SOX5|6660|SRY (sex determining region Y)-box 5	AK096569|SOX5|6660|SRY (sex determining region Y)-box 5
hg18_v1_chr12_+_6926014_6926149	0.0774492	SOX2.p2	BC002523|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6	BC007667|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6	AK300167|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6	BT007390|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6	DQ891946|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6	DQ895133|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6
hg18_v1_chr17_-_77093468_77093595	0.0772815	SOX2.p2	CR598971|ACTG1|71|actin, gamma 1	BC023548|ACTG1|71|actin, gamma 1	BC039144|ACTG1|71|actin, gamma 1
hg18_v1_chr17_-_77092569_77092729	0.0771818	SOX2.p2	CR603292|ACTG1|71|actin, gamma 1	CR610785|ACTG1|71|actin, gamma 1	CR608395|ACTG1|71|actin, gamma 1	CR624832|ACTG1|71|actin, gamma 1
hg18_v1_chr3_-_49204294_49204294	0.0771461	SOX2.p2	NM_001080528|LOC646498|646498|hypothetical protein LOC646498
hg18_v1_chr2_+_203208064_203208145	0.0770997	SOX2.p2	NM_173511|FAM117B|150864|family with sequence similarity 117, member B
hg18_v1_chr14_-_60260780_60260841	0.0768666	SOX2.p2	AK309358|SIX4|51804|SIX homeobox 4
hg18_v1_chr5_+_180399871_180399971	0.076839	SOX2.p2	AK298113|BTNL9|153579|butyrophilin-like 9	BC062459|BTNL9|153579|butyrophilin-like 9
hg18_v1_chr2_+_148318520_148318654	0.0768206	SOX2.p2	AK301629|ACVR2A|92|activin A receptor, type IIA	M93415|ACVR2A|92|activin A receptor, type IIA
hg18_v1_chr1_+_246635918_246635918	0.0766121	SOX2.p2	NM_030904|OR2T1|26696|olfactory receptor, family 2, subfamily T, member 1
hg18_v1_chr12_-_56432377_56432383	0.0765921	SOX2.p2	CR597992|CDK4|1019|cyclin-dependent kinase 4	BC015669|CDK4|1019|cyclin-dependent kinase 4	CR609991|CDK4|1019|cyclin-dependent kinase 4
hg18_v1_chr9_-_35640852_35640946	0.0763932	SOX2.p2	CR624155|SIT1|27240|signaling threshold regulating transmembrane adaptor 1	AK314758|SIT1|27240|signaling threshold regulating transmembrane adaptor 1	AJ010059|SIT1|27240|signaling threshold regulating transmembrane adaptor 1	BC102029|SIT1|27240|signaling threshold regulating transmembrane adaptor 1	BC104491|SIT1|27240|signaling threshold regulating transmembrane adaptor 1	BC107484|SIT1|27240|signaling threshold regulating transmembrane adaptor 1	NM_014450|SIT1|27240|signaling threshold regulating transmembrane adaptor 1
hg18_v1_chr4_+_1872150_1872179	0.0762666	SOX2.p2	AF071593|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1	AF071594|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1	NM_133334|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1	AY694128|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1
hg18_v1_chr17_-_77093603_77093659	0.0762502	SOX2.p2	CR612876|ACTG1|71|actin, gamma 1
hg18_v1_chr9_+_96561750_96561886	0.0761413	SOX2.p2	CR626537|C9orf3|84909|chromosome 9 open reading frame 3	NM_001193329|C9orf3|84909|chromosome 9 open reading frame 3	AJ560639|C9orf3|84909|chromosome 9 open reading frame 3
hg18_v1_chr11_+_129689536_129689628	0.0761026	SOX2.p2	AK091840|FLJ34521|646383|hypothetical protein LOC646383
hg18_v1_chr6_-_116973465_116973465	0.0760344	SOX2.p2	NM_001139444|BET3L|100128327|BET3 like (S. cerevisiae)
hg18_v1_chr7_-_148212336_148212382	0.0760236	SOX2.p2	AK303637|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	NM_004456|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	NM_152998|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)
hg18_v1_chr15_+_21361901_21362021	0.0758994	SOX2.p2	BC044639|MKRN3|7681|makorin ring finger protein 3	BC070293|MKRN3|7681|makorin ring finger protein 3	EU446987|MKRN3|7681|makorin ring finger protein 3
hg18_v1_chr17_-_40339919_40339965	0.0758341	SOX2.p2	CR591619|GFAP|2670|glial fibrillary acidic protein
hg18_v1_chr11_+_186760_186794	0.0757523	SOX2.p2	NM_053280|ODF3|113746|outer dense fiber of sperm tails 3	AY713299|ODF3|113746|outer dense fiber of sperm tails 3	AL133658|ODF3|113746|outer dense fiber of sperm tails 3
hg18_v1_chr6_-_24985432_24985561	0.0755532	SOX2.p2	U49187|FAM65B|9750|family with sequence similarity 65, member B	AK300138|FAM65B|9750|family with sequence similarity 65, member B	BC001232|FAM65B|9750|family with sequence similarity 65, member B	NM_015864|FAM65B|9750|family with sequence similarity 65, member B
hg18_v1_chr1_-_153916221_153916243	0.0753745	SOX2.p2	AK303386|YY1AP1|55249|YY1 associated protein 1	NM_001198899|YY1AP1|55249|YY1 associated protein 1
hg18_v1_chr8_+_42871319_42871431	0.0753737	SOX2.p2	
hg18_v1_chr16_+_87741416_87741478	0.0753096	SOX2.p2	
hg18_v1_chr4_-_40212670_40212760	0.0752719	SOX2.p2	AK000280|RBM47|54502|RNA binding motif protein 47	NM_019027|RBM47|54502|RNA binding motif protein 47
hg18_v1_chr19_-_47790820_47790921	0.0752715	SOX2.p2	DQ891971|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	DQ895161|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	X52378|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	AK297012|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	BC026263|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	D90064|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	M33326|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	AK312652|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	NM_001816|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8
hg18_v1_chr19_+_10932792_10932856	0.0748448	SOX2.p2	NM_001128849|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	U29175|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	D26156|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
hg18_v1_chr7_+_94130752_94130882	0.0747585	SOX2.p2	AB028974|PEG10|23089|paternally expressed 10	AF216076|PEG10|23089|paternally expressed 10
hg18_v1_chr11_+_93501791_93501807	0.0747406	SOX2.p2	AK074897|PANX1|24145|pannexin 1	AF093239|PANX1|24145|pannexin 1
hg18_v1_chr2_-_234441739_234441761	0.0747059	SOX2.p2	AK316372|MSL3L2|151507|male-specific lethal 3-like 2 (Drosophila)
hg18_v1_chrX_-_130250880_130251007	0.0745859	SOX2.p2	Y10523|IGSF1|3547|immunoglobulin superfamily, member 1	AK057916|IGSF1|3547|immunoglobulin superfamily, member 1	BC063884|IGSF1|3547|immunoglobulin superfamily, member 1	AF034198|IGSF1|3547|immunoglobulin superfamily, member 1	CR614008|IGSF1|3547|immunoglobulin superfamily, member 1	AB058894|IGSF1|3547|immunoglobulin superfamily, member 1	AK226008|IGSF1|3547|immunoglobulin superfamily, member 1	AK307871|IGSF1|3547|immunoglobulin superfamily, member 1
hg18_v1_chr7_-_92585205_92585234	0.0745767	SOX2.p2	AB095925|SAMD9|54809|sterile alpha motif domain containing 9	BC150249|SAMD9|54809|sterile alpha motif domain containing 9	AK122951|SAMD9|54809|sterile alpha motif domain containing 9	BX647072|SAMD9|54809|sterile alpha motif domain containing 9	AF453311|SAMD9|54809|sterile alpha motif domain containing 9
hg18_v1_chrX_-_15593074_15593074	0.0745654	SOX2.p2	BC014317|TMEM27|57393|transmembrane protein 27	NM_020665|TMEM27|57393|transmembrane protein 27
hg18_v1_chr15_-_21483503_21483548	0.0745609	SOX2.p2	U35139|NDN|4692|necdin homolog (mouse)	CR591182|NDN|4692|necdin homolog (mouse)	CR601504|NDN|4692|necdin homolog (mouse)	BC008750|NDN|4692|necdin homolog (mouse)	CR618894|NDN|4692|necdin homolog (mouse)	CR590044|NDN|4692|necdin homolog (mouse)	CR595233|NDN|4692|necdin homolog (mouse)	CR595786|NDN|4692|necdin homolog (mouse)	CR599213|NDN|4692|necdin homolog (mouse)	CR590944|NDN|4692|necdin homolog (mouse)	CR593341|NDN|4692|necdin homolog (mouse)	CR596254|NDN|4692|necdin homolog (mouse)	CR596560|NDN|4692|necdin homolog (mouse)	CR597888|NDN|4692|necdin homolog (mouse)	CR598564|NDN|4692|necdin homolog (mouse)	CR609537|NDN|4692|necdin homolog (mouse)	CR609863|NDN|4692|necdin homolog (mouse)	CR611314|NDN|4692|necdin homolog (mouse)	CR616323|NDN|4692|necdin homolog (mouse)	CR619220|NDN|4692|necdin homolog (mouse)	CR619365|NDN|4692|necdin homolog (mouse)	CR622500|NDN|4692|necdin homolog (mouse)	AK312779|NDN|4692|necdin homolog (mouse)	AK129654|NDN|4692|necdin homolog (mouse)	NM_002487|NDN|4692|necdin homolog (mouse)	CR614412|NDN|4692|necdin homolog (mouse)
hg18_v1_chr10_-_61336242_61336419	0.074557	SOX2.p2	BC064391|CCDC6|8030|coiled-coil domain containing 6	BC036757|CCDC6|8030|coiled-coil domain containing 6	BC022284|CCDC6|8030|coiled-coil domain containing 6	AK292593|CCDC6|8030|coiled-coil domain containing 6	NM_005436|CCDC6|8030|coiled-coil domain containing 6
hg18_v1_chr5_+_86599902_86599920	0.0745001	SOX2.p2	M23379|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1	NM_002890|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1
hg18_v1_chr1_+_12108542_12108664	0.0743603	SOX2.p2	D86042|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8	BC063482|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8	NM_152942|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8	BC073839|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8	BC141804|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8
hg18_v1_chr5_+_72504778_72504796	0.0743164	SOX2.p2	AK315460|TMEM174|134288|transmembrane protein 174	NM_153217|TMEM174|134288|transmembrane protein 174	AK055830|TMEM174|134288|transmembrane protein 174
hg18_v1_chr4_-_77163609_77163673	0.0742754	SOX2.p2	DQ892786|CXCL10|3627|chemokine (C-X-C motif) ligand 10	DQ896033|CXCL10|3627|chemokine (C-X-C motif) ligand 10	BC010954|CXCL10|3627|chemokine (C-X-C motif) ligand 10	NM_001565|CXCL10|3627|chemokine (C-X-C motif) ligand 10	X02530|CXCL10|3627|chemokine (C-X-C motif) ligand 10
hg18_v1_chr17_-_16816113_16816145	0.074216	SOX2.p2	AY302137|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B	BC109392|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B	AF023614|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B	AK223453|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B	NM_012452|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B	AK313302|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B
hg18_v1_chr2_-_170389669_170389698	0.0741929	SOX2.p2	CR609377|METTL5|29081|methyltransferase like 5
hg18_v1_chr3_+_195336625_195336630	0.0740657	SOX2.p2	AK000415|HES1|3280|hairy and enhancer of split 1, (Drosophila)	NM_005524|HES1|3280|hairy and enhancer of split 1, (Drosophila)	BC005178|HES1|3280|hairy and enhancer of split 1, (Drosophila)
hg18_v1_chr11_-_71501385_71501473	0.0740082	SOX2.p2	AK311146|C11orf51|25906|chromosome 11 open reading frame 51	CR603805|C11orf51|25906|chromosome 11 open reading frame 51	AK222622|C11orf51|25906|chromosome 11 open reading frame 51	BC005156|C11orf51|25906|chromosome 11 open reading frame 51	BC005393|C11orf51|25906|chromosome 11 open reading frame 51	AF077206|C11orf51|25906|chromosome 11 open reading frame 51	NM_014042|C11orf51|25906|chromosome 11 open reading frame 51	AL080071|C11orf51|25906|chromosome 11 open reading frame 51
hg18_v1_chr1_+_149897334_149897386	0.0739313	SOX2.p2	BC107862|SNX27|81609|sorting nexin family member 27
hg18_v1_chrX_-_100759562_100759646	0.073927	SOX2.p2	CR599653|ARMCX6|54470|armadillo repeat containing, X-linked 6	CR624030|ARMCX6|54470|armadillo repeat containing, X-linked 6	CR598648|ARMCX6|54470|armadillo repeat containing, X-linked 6	CR614615|ARMCX6|54470|armadillo repeat containing, X-linked 6	CR591698|ARMCX6|54470|armadillo repeat containing, X-linked 6	BC007677|ARMCX6|54470|armadillo repeat containing, X-linked 6	NM_001009584|ARMCX6|54470|armadillo repeat containing, X-linked 6	NM_001184768|ARMCX6|54470|armadillo repeat containing, X-linked 6	NM_019007|ARMCX6|54470|armadillo repeat containing, X-linked 6
hg18_v1_chr20_-_45410033_45410076	0.0738226	SOX2.p2	DQ082998|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ082999|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368669|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368670|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368671|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368672|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368673|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368674|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368675|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368676|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368677|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368678|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368679|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368680|ZMYND8|23613|zinc finger, MYND-type containing 8
hg18_v1_chr17_+_63252087_63252242	0.0737824	SOX2.p2	AK297281|BPTF|2186|bromodomain PHD finger transcription factor	BC037422|BPTF|2186|bromodomain PHD finger transcription factor	NM_004459|BPTF|2186|bromodomain PHD finger transcription factor	NM_182641|BPTF|2186|bromodomain PHD finger transcription factor	AB032251|BPTF|2186|bromodomain PHD finger transcription factor
hg18_v1_chr2_-_225073357_225073435	0.0737775	SOX2.p2	CR603582|CUL3|8452|cullin 3
hg18_v1_chr7_-_23020257_23020294	0.0737651	SOX2.p2	CR626024|FAM126A|84668|family with sequence similarity 126, member A	BC018710|FAM126A|84668|family with sequence similarity 126, member A	NM_032581|FAM126A|84668|family with sequence similarity 126, member A
hg18_v1_chr1_-_241484963_241484995	0.073759	SOX2.p2	AK296812|CEP170|9859|centrosomal protein 170kDa	AK299552|CEP170|9859|centrosomal protein 170kDa
hg18_v1_chr17_-_37590910_37590995	0.0737303	SOX2.p2	AF041240|HCRT|3060|hypocretin (orexin) neuropeptide precursor	NM_001524|HCRT|3060|hypocretin (orexin) neuropeptide precursor
hg18_v1_chr7_-_148212312_148212316	0.0736736	SOX2.p2	AK314291|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)
hg18_v1_chr17_-_36725470_36725472	0.0736404	SOX2.p2	BC069078|KRTAP17-1|83902|keratin associated protein 17-1	AJ406952|KRTAP17-1|83902|keratin associated protein 17-1	BC069297|KRTAP17-1|83902|keratin associated protein 17-1	NM_031964|KRTAP17-1|83902|keratin associated protein 17-1
hg18_v1_chr4_+_53986759_53986864	0.0735392	SOX2.p2	CR595922|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	BC026724|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg18_v1_chr12_-_100979893_100979921	0.0734566	SOX2.p2	BC010889|CCDC53|51019|coiled-coil domain containing 53
hg18_v1_chr12_-_10953427_10953427	0.0733438	SOX2.p2	BC095518|TAS2R13|50838|taste receptor, type 2, member 13	NM_023920|TAS2R13|50838|taste receptor, type 2, member 13
hg18_v1_chr1_+_45789111_45789229	0.073252	SOX2.p2	BC000670|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)	AK307237|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)	CR598490|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)	CR616743|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)	CR617059|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)	CR614844|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)	CR621968|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)	CR613190|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)	CR605893|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)	AK307288|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)	CR600290|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)	CR616472|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)	CR604674|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)	CR606043|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)
hg18_v1_chrX_-_128805400_128805619	0.0732494	SOX2.p2	AL161962|ZDHHC9|51114|zinc finger, DHHC-type containing 9	AK096967|ZDHHC9|51114|zinc finger, DHHC-type containing 9	AF151847|ZDHHC9|51114|zinc finger, DHHC-type containing 9	AY358558|ZDHHC9|51114|zinc finger, DHHC-type containing 9	BC006200|ZDHHC9|51114|zinc finger, DHHC-type containing 9	BC012826|ZDHHC9|51114|zinc finger, DHHC-type containing 9	BC003128|ZDHHC9|51114|zinc finger, DHHC-type containing 9	AK001112|ZDHHC9|51114|zinc finger, DHHC-type containing 9	AY952881|ZDHHC9|51114|zinc finger, DHHC-type containing 9	NM_016032|ZDHHC9|51114|zinc finger, DHHC-type containing 9
hg18_v1_chr12_+_27288475_27288503	0.0731281	SOX2.p2	CR602115|STK38L|23012|serine/threonine kinase 38 like	AK304755|STK38L|23012|serine/threonine kinase 38 like	CR606717|STK38L|23012|serine/threonine kinase 38 like
hg18_v1_chr14_-_54720101_54720218	0.0731176	SOX2.p2	BT007344|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5
hg18_v1_chr3_-_113842652_113842682	0.0730204	SOX2.p2	AY548106|CCDC80|151887|coiled-coil domain containing 80	AY548107|CCDC80|151887|coiled-coil domain containing 80	BC110842|CCDC80|151887|coiled-coil domain containing 80	AY526612|CCDC80|151887|coiled-coil domain containing 80	NM_199511|CCDC80|151887|coiled-coil domain containing 80	NM_199512|CCDC80|151887|coiled-coil domain containing 80	AK304561|CCDC80|151887|coiled-coil domain containing 80
hg18_v1_chr10_+_11247449_11247455	0.0729917	SOX2.p2	AK302681|CELF2|10659|CUGBP, Elav-like family member 2	AK310038|CELF2|10659|CUGBP, Elav-like family member 2
hg18_v1_chr19_+_3831660_3831671	0.0729356	SOX2.p2	AB058775|ATCAY|85300|ataxia, cerebellar, Cayman type
hg18_v1_chr5_-_98290117_98290139	0.0727401	SOX2.p2	BC054860|CHD1|1105|chromodomain helicase DNA binding protein 1	BC117134|CHD1|1105|chromodomain helicase DNA binding protein 1	NM_001270|CHD1|1105|chromodomain helicase DNA binding protein 1	AF006513|CHD1|1105|chromodomain helicase DNA binding protein 1
hg18_v1_chr3_-_101077605_101077757	0.07272	SOX2.p2	EU531865|FILIP1L|11259|filamin A interacting protein 1-like	EU531866|FILIP1L|11259|filamin A interacting protein 1-like	BC027860|FILIP1L|11259|filamin A interacting protein 1-like	AK225855|FILIP1L|11259|filamin A interacting protein 1-like	AK096195|FILIP1L|11259|filamin A interacting protein 1-like	NM_014890|FILIP1L|11259|filamin A interacting protein 1-like
hg18_v1_chr12_-_49763566_49763715	0.0726175	SOX2.p2	AJ298133|CSRNP2|81566|cysteine-serine-rich nuclear protein 2	NM_030809|CSRNP2|81566|cysteine-serine-rich nuclear protein 2
hg18_v1_chr2_+_105799354_105799461	0.0723866	SOX2.p2	AF047487|NCK2|8440|NCK adaptor protein 2	BC007195|NCK2|8440|NCK adaptor protein 2
hg18_v1_chr3_+_188397967_188398105	0.072282	SOX2.p2	BC065202|RTP1|132112|receptor (chemosensory) transporter protein 1	NM_153708|RTP1|132112|receptor (chemosensory) transporter protein 1	BC034744|RTP1|132112|receptor (chemosensory) transporter protein 1	DQ890807|RTP1|132112|receptor (chemosensory) transporter protein 1	DQ893962|RTP1|132112|receptor (chemosensory) transporter protein 1	AY562235|RTP1|132112|receptor (chemosensory) transporter protein 1
hg18_v1_chr4_+_155921876_155921949	0.0722506	SOX2.p2	NM_144979|RBM46|166863|RNA binding motif protein 46	AK302720|RBM46|166863|RNA binding motif protein 46	BC028588|RBM46|166863|RNA binding motif protein 46
hg18_v1_chr1_-_157003095_157003115	0.0722164	SOX2.p2	NM_001005185|OR6N1|128372|olfactory receptor, family 6, subfamily N, member 1	BC146847|OR6N1|128372|olfactory receptor, family 6, subfamily N, member 1
hg18_v1_chr1_-_1233109_1233400	0.0722088	SOX2.p2	BC051194|ACAP3|116983|ArfGAP with coiled-coil, ankyrin repeat and PH domains 3	NM_030649|ACAP3|116983|ArfGAP with coiled-coil, ankyrin repeat and PH domains 3
hg18_v1_chr11_-_118571793_118571793	0.0721485	SOX2.p2	NM_001145018|CCDC153|283152|coiled-coil domain containing 153
hg18_v1_chr2_+_148318770_148318841	0.0721164	SOX2.p2	AK314124|ACVR2A|92|activin A receptor, type IIA
hg18_v1_chr22_+_42137955_42137967	0.0720459	SOX2.p2	AK290541|MPPED1|758|metallophosphoesterase domain containing 1	AK297276|MPPED1|758|metallophosphoesterase domain containing 1	AK299516|MPPED1|758|metallophosphoesterase domain containing 1	AK299531|MPPED1|758|metallophosphoesterase domain containing 1	NM_001044370|MPPED1|758|metallophosphoesterase domain containing 1
hg18_v1_chrX_-_73429101_73429159	0.0719138	SOX2.p2	AK057701|MIR374AHG|100302692|mir-374a-545 cluster host gene (non-protein coding)
hg18_v1_chr3_-_47798279_47798307	0.0716535	SOX2.p2	EU832157|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	EU832251|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
hg18_v1_chr17_-_41626032_41626140	0.0715858	SOX2.p2	BC098376|KIAA1267|284058|KIAA1267	NM_015443|KIAA1267|284058|KIAA1267
hg18_v1_chr7_+_22733290_22733406	0.0715465	SOX2.p2	AK298077|IL6|3569|interleukin 6 (interferon, beta 2)	AK301141|IL6|3569|interleukin 6 (interferon, beta 2)	NM_000600|IL6|3569|interleukin 6 (interferon, beta 2)	X04430|IL6|3569|interleukin 6 (interferon, beta 2)	AK298013|IL6|3569|interleukin 6 (interferon, beta 2)	M14584|IL6|3569|interleukin 6 (interferon, beta 2)	M18403|IL6|3569|interleukin 6 (interferon, beta 2)	BC015511|IL6|3569|interleukin 6 (interferon, beta 2)	M54894|IL6|3569|interleukin 6 (interferon, beta 2)	CR590965|IL6|3569|interleukin 6 (interferon, beta 2)	M29150|IL6|3569|interleukin 6 (interferon, beta 2)	X04602|IL6|3569|interleukin 6 (interferon, beta 2)	S56892|IL6|3569|interleukin 6 (interferon, beta 2)	BT019748|IL6|3569|interleukin 6 (interferon, beta 2)	BT019749|IL6|3569|interleukin 6 (interferon, beta 2)	CR450296|IL6|3569|interleukin 6 (interferon, beta 2)	DQ891463|IL6|3569|interleukin 6 (interferon, beta 2)	DQ894639|IL6|3569|interleukin 6 (interferon, beta 2)
hg18_v1_chr5_-_134762785_134762790	0.0715116	SOX2.p2	BC095406|H2AFY|9555|H2A histone family, member Y	CR624310|H2AFY|9555|H2A histone family, member Y
hg18_v1_chr11_-_129689669_129689816	0.0714951	SOX2.p2	AK314701|ZBTB44|29068|zinc finger and BTB domain containing 44	BC030580|ZBTB44|29068|zinc finger and BTB domain containing 44	BC049375|ZBTB44|29068|zinc finger and BTB domain containing 44	BC071729|ZBTB44|29068|zinc finger and BTB domain containing 44	NM_014155|ZBTB44|29068|zinc finger and BTB domain containing 44
hg18_v1_chr11_+_4799126_4799191	0.071383	SOX2.p2	BC136877|OR51F2|119694|olfactory receptor, family 51, subfamily F, member 2	NM_001004753|OR51F2|119694|olfactory receptor, family 51, subfamily F, member 2
hg18_v1_chr9_+_130684189_130684219	0.0713527	SOX2.p2	NM_001127245|LRRC8A|56262|leucine rich repeat containing 8 family, member A	NM_019594|LRRC8A|56262|leucine rich repeat containing 8 family, member A
hg18_v1_chr21_+_39739663_39739667	0.0713127	SOX2.p2	NM_001001713|SH3BGR|6450|SH3 domain binding glutamic acid-rich protein
hg18_v1_chr13_+_28900776_28900845	0.0711381	SOX2.p2	BC032481|MTUS2|23281|microtubule associated tumor suppressor candidate 2	NM_015233|MTUS2|23281|microtubule associated tumor suppressor candidate 2	AK293970|MTUS2|23281|microtubule associated tumor suppressor candidate 2	BC119654|MTUS2|23281|microtubule associated tumor suppressor candidate 2	BC119655|MTUS2|23281|microtubule associated tumor suppressor candidate 2	BC129985|MTUS2|23281|microtubule associated tumor suppressor candidate 2
hg18_v1_chr6_-_18095831_18095859	0.0711304	SOX2.p2	BC062673|KIF13A|63971|kinesin family member 13A
hg18_v1_chr9_-_34610483_34610488	0.0711138	SOX2.p2	BC107697|DCTN3|11258|dynactin 3 (p22)	AK314730|DCTN3|11258|dynactin 3 (p22)
hg18_v1_chr4_+_42590038_42590039	0.071109	SOX2.p2	NM_001080476|GRXCR1|389207|glutaredoxin, cysteine rich 1
hg18_v1_chr10_-_105835525_105835573	0.0710534	SOX2.p2	M91669|COL17A1|1308|collagen, type XVII, alpha 1	AK309940|COL17A1|1308|collagen, type XVII, alpha 1
hg18_v1_chr4_-_164754106_164754225	0.07105	SOX2.p2	CR607777|MARCH1|55016|membrane-associated ring finger (C3HC4) 1	AK000675|MARCH1|55016|membrane-associated ring finger (C3HC4) 1	AK301408|MARCH1|55016|membrane-associated ring finger (C3HC4) 1	NM_017923|MARCH1|55016|membrane-associated ring finger (C3HC4) 1
hg18_v1_chrX_-_13247946_13248172	0.0709765	SOX2.p2	AB050195|ATXN3L|92552|ataxin 3-like	BC137186|ATXN3L|92552|ataxin 3-like	BC137187|ATXN3L|92552|ataxin 3-like
hg18_v1_chr11_+_22316242_22316242	0.0709412	SOX2.p2	AB032435|SLC17A6|57084|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6	NM_020346|SLC17A6|57084|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6
hg18_v1_chr5_+_85949511_85949517	0.0709326	SOX2.p2	AK026505|COX7C|1350|cytochrome c oxidase subunit VIIc
hg18_v1_chr16_+_2503915_2503977	0.0709193	SOX2.p2	CR592409|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	CR599309|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	CR622720|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	BC009290|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	CR608280|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	CR592150|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c
hg18_v1_chr17_-_64752550_64752581	0.0708254	SOX2.p2	AY028900|ABCA10|10349|ATP-binding cassette, sub-family A (ABC1), member 10	NM_080282|ABCA10|10349|ATP-binding cassette, sub-family A (ABC1), member 10	AY247065|ABCA10|10349|ATP-binding cassette, sub-family A (ABC1), member 10
hg18_v1_chr12_-_98072602_98072806	0.0707121	SOX2.p2	BC026313|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	NM_020140|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	NM_181670|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	CR602042|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	AF164792|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	BC142669|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	BC150204|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	AK289768|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	BC068451|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B
hg18_v1_chr2_+_216695062_216695162	0.0705799	SOX2.p2	AK026166|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)
hg18_v1_chrX_+_27736027_27736045	0.0704188	SOX2.p2	AK057527|MAGEB10|139422|melanoma antigen family B, 10	NM_182506|MAGEB10|139422|melanoma antigen family B, 10	BC101307|MAGEB10|139422|melanoma antigen family B, 10	BC101309|MAGEB10|139422|melanoma antigen family B, 10	BC101310|MAGEB10|139422|melanoma antigen family B, 10
hg18_v1_chr6_-_13922525_13922969	0.0703984	SOX2.p2	BC008234|CCDC90A|63933|coiled-coil domain containing 90A	BC016850|CCDC90A|63933|coiled-coil domain containing 90A	NM_001031713|CCDC90A|63933|coiled-coil domain containing 90A	AK024611|CCDC90A|63933|coiled-coil domain containing 90A
hg18_v1_chr4_-_26100986_26101181	0.070367	SOX2.p2	AY322549|CCKAR|886|cholecystokinin A receptor	BC074987|CCKAR|886|cholecystokinin A receptor	L13605|CCKAR|886|cholecystokinin A receptor	L19315|CCKAR|886|cholecystokinin A receptor	NM_000730|CCKAR|886|cholecystokinin A receptor	AK313978|CCKAR|886|cholecystokinin A receptor
hg18_v1_chr2_+_172530120_172530246	0.0703321	SOX2.p2	CR592532|HAT1|8520|histone acetyltransferase 1	BC018682|HAT1|8520|histone acetyltransferase 1
hg18_v1_chr4_+_106693225_106693237	0.0703259	SOX2.p2	AK000191|ARHGEF38|54848|Rho guanine nucleotide exchange factor (GEF) 38	NM_017700|ARHGEF38|54848|Rho guanine nucleotide exchange factor (GEF) 38	BC105695|ARHGEF38|54848|Rho guanine nucleotide exchange factor (GEF) 38
hg18_v1_chr8_-_105670300_105670398	0.0702075	SOX2.p2	DQ892323|LRP12|29967|low density lipoprotein receptor-related protein 12	DQ895525|LRP12|29967|low density lipoprotein receptor-related protein 12	BC032109|LRP12|29967|low density lipoprotein receptor-related protein 12	AK289752|LRP12|29967|low density lipoprotein receptor-related protein 12	AF166350|LRP12|29967|low density lipoprotein receptor-related protein 12	CR749434|LRP12|29967|low density lipoprotein receptor-related protein 12
hg18_v1_chr4_-_83570318_83570437	0.0701188	SOX2.p2	AB017019|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	NM_031372|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like
hg18_v1_chr5_+_61637993_61638061	0.0700475	SOX2.p2	AK297347|KIF2A|3796|kinesin heavy chain member 2A	AK307880|KIF2A|3796|kinesin heavy chain member 2A	EF560716|KIF2A|3796|kinesin heavy chain member 2A	EF560728|KIF2A|3796|kinesin heavy chain member 2A	EU832810|KIF2A|3796|kinesin heavy chain member 2A	GQ129246|KIF2A|3796|kinesin heavy chain member 2A	AK315866|KIF2A|3796|kinesin heavy chain member 2A
hg18_v1_chr3_-_102522093_102522131	0.069993	SOX2.p2	AF173155|IMPG2|50939|interphotoreceptor matrix proteoglycan 2	NM_016247|IMPG2|50939|interphotoreceptor matrix proteoglycan 2
hg18_v1_chr9_+_130684248_130684299	0.0699596	SOX2.p2	AB037858|LRRC8A|56262|leucine rich repeat containing 8 family, member A	BC051322|LRRC8A|56262|leucine rich repeat containing 8 family, member A
hg18_v1_chr3_+_9748439_9748461	0.0699219	SOX2.p2	BC053851|BRPF1|7862|bromodomain and PHD finger containing, 1
hg18_v1_chr8_-_38444398_38444519	0.0699044	SOX2.p2	AK291754|FGFR1|2260|fibroblast growth factor receptor 1	AK309947|FGFR1|2260|fibroblast growth factor receptor 1	AK292470|FGFR1|2260|fibroblast growth factor receptor 1	NM_001174065|FGFR1|2260|fibroblast growth factor receptor 1	NM_001174066|FGFR1|2260|fibroblast growth factor receptor 1	NM_001174067|FGFR1|2260|fibroblast growth factor receptor 1
hg18_v1_chr14_+_64041257_64041295	0.0699003	SOX2.p2	AK291743|ZBTB1|22890|zinc finger and BTB domain containing 1
hg18_v1_chr1_-_199742864_199742868	0.0697808	SOX2.p2	BC018806|CSRP1|1465|cysteine and glycine-rich protein 1	CR606958|CSRP1|1465|cysteine and glycine-rich protein 1	CR598103|CSRP1|1465|cysteine and glycine-rich protein 1	CR613755|CSRP1|1465|cysteine and glycine-rich protein 1	CR613760|CSRP1|1465|cysteine and glycine-rich protein 1	CR616700|CSRP1|1465|cysteine and glycine-rich protein 1
hg18_v1_chr12_+_63090008_63090082	0.0697199	SOX2.p2	BC020569|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)	Y16414|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)	AF039022|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)
hg18_v1_chr12_-_109424260_109424327	0.0696425	SOX2.p2	BC015095|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	AF201946|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	AF175264|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	CR612363|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	BC000880|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	AF168716|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	AF193795|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	AK129767|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	BC017964|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	AL136614|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	BC095446|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	NM_016226|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	NM_057180|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	CR594493|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	BC032462|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)
hg18_v1_chr11_+_114054409_114054507	0.0695943	SOX2.p2	NM_182495|FAM55B|120406|family with sequence similarity 55, member B	AK057953|FAM55B|120406|family with sequence similarity 55, member B	BC111797|FAM55B|120406|family with sequence similarity 55, member B
hg18_v1_chr11_-_47467094_47467152	0.0693342	SOX2.p2	AK304430|CELF1|10658|CUGBP, Elav-like family member 1	AJ007988|CELF1|10658|CUGBP, Elav-like family member 1	DQ893717|CELF1|10658|CUGBP, Elav-like family member 1	AF248648|CELF1|10658|CUGBP, Elav-like family member 1	NM_001025596|CELF1|10658|CUGBP, Elav-like family member 1	NM_001172640|CELF1|10658|CUGBP, Elav-like family member 1	AF267533|CELF1|10658|CUGBP, Elav-like family member 1	AF267534|CELF1|10658|CUGBP, Elav-like family member 1
hg18_v1_chr7_-_116854765_116854812	0.069264	SOX2.p2	AK093445|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	BC126186|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	BC126188|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	BC144207|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	BC144212|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	AF461259|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	BC028695|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	BC034963|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	BC098399|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	BC068488|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	NM_130768|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1
hg18_v1_chr6_-_74284522_74285965	0.0691883	SOX2.p2	CR606729|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR591544|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR625724|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR619717|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR603959|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR625353|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR590407|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	DQ185041|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR603651|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR616704|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR603828|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR605857|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR613015|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	BC012509|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR624162|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR625682|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR606125|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR613220|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR608362|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR623409|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR595753|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR610218|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR601985|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR603053|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR597006|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR593301|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR592032|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR609311|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR618335|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR608355|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR617969|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR604172|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR610709|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	M27364|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR609287|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR623212|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR602993|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR606781|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR592507|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR610076|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	BC014892|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	BC022412|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	BC065761|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR614602|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR620971|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR618534|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR596406|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	BC014377|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR625936|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR604181|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR599305|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	BC063511|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	AK098587|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	AF211972|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR618799|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR590392|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	M29548|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR624039|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR621964|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR593256|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	AK222519|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	BC020477|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR607669|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	DQ867534|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	AF328730|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	AF397403|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR590136|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR592691|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR611331|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR618646|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR591227|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR608799|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1
hg18_v1_chr2_-_158439868_158439868	0.0691558	SOX2.p2	BC033867|ACVR1|90|activin A receptor, type I	BC036748|ACVR1|90|activin A receptor, type I	NM_001105|ACVR1|90|activin A receptor, type I
hg18_v1_chr4_+_35962038_35962038	0.0691382	SOX2.p2	BC157885|DTHD1|401124|death domain containing 1	NM_001170700|DTHD1|401124|death domain containing 1
hg18_v1_chr9_-_34610489_34610497	0.0690334	SOX2.p2	NM_007234|DCTN3|11258|dynactin 3 (p22)	NM_024348|DCTN3|11258|dynactin 3 (p22)
hg18_v1_chr5_-_134762814_134762826	0.0690258	SOX2.p2	AK023409|H2AFY|9555|H2A histone family, member Y	AK296014|H2AFY|9555|H2A histone family, member Y	CR607903|H2AFY|9555|H2A histone family, member Y	CR622086|H2AFY|9555|H2A histone family, member Y	NM_001040158|H2AFY|9555|H2A histone family, member Y	NM_138609|H2AFY|9555|H2A histone family, member Y	NM_138610|H2AFY|9555|H2A histone family, member Y
hg18_v1_chrX_+_48252290_48252420	0.0690163	SOX2.p2	NM_022825|PORCN|64840|porcupine homolog (Drosophila)	NM_203473|PORCN|64840|porcupine homolog (Drosophila)	AK293347|PORCN|64840|porcupine homolog (Drosophila)	AK056340|PORCN|64840|porcupine homolog (Drosophila)	BC019080|PORCN|64840|porcupine homolog (Drosophila)	AK057727|PORCN|64840|porcupine homolog (Drosophila)	CR623014|PORCN|64840|porcupine homolog (Drosophila)	AK314745|PORCN|64840|porcupine homolog (Drosophila)
hg18_v1_chr9_+_137553104_137553150	0.069015	SOX2.p2	M90424|LCN1|3933|lipocalin 1 (tear prealbumin)	BC065721|LCN1|3933|lipocalin 1 (tear prealbumin)	NM_002297|LCN1|3933|lipocalin 1 (tear prealbumin)	X67647|LCN1|3933|lipocalin 1 (tear prealbumin)	BC074925|LCN1|3933|lipocalin 1 (tear prealbumin)	BC074926|LCN1|3933|lipocalin 1 (tear prealbumin)	X62418|LCN1|3933|lipocalin 1 (tear prealbumin)
hg18_v1_chrX_+_37750778_37750810	0.0689329	SOX2.p2	BX647688|SYTL5|94122|synaptotagmin-like 5	NM_001163335|SYTL5|94122|synaptotagmin-like 5	NM_138780|SYTL5|94122|synaptotagmin-like 5	AK125106|SYTL5|94122|synaptotagmin-like 5
hg18_v1_chr2_-_26058941_26058948	0.0687724	SOX2.p2	NM_002254|KIF3C|3797|kinesin family member 3C
hg18_v1_chr9_-_40782062_40782111	0.068699	SOX2.p2	AK057375|ZNF658|26149|zinc finger protein 658	AK292150|ZNF658|26149|zinc finger protein 658	NM_033160|ZNF658|26149|zinc finger protein 658
hg18_v1_chr1_-_198645788_198645846	0.0686793	SOX2.p2	BC060820|ZNF281|23528|zinc finger protein 281	NM_012482|ZNF281|23528|zinc finger protein 281	AK027284|ZNF281|23528|zinc finger protein 281
hg18_v1_chr3_+_108578877_108579124	0.068672	SOX2.p2	AK058091|CCDC54|84692|coiled-coil domain containing 54	NM_032600|CCDC54|84692|coiled-coil domain containing 54	BC030780|CCDC54|84692|coiled-coil domain containing 54	AF367469|CCDC54|84692|coiled-coil domain containing 54	DQ890829|CCDC54|84692|coiled-coil domain containing 54	DQ890830|CCDC54|84692|coiled-coil domain containing 54	DQ893985|CCDC54|84692|coiled-coil domain containing 54
hg18_v1_chr17_-_70901303_70901442	0.0686285	SOX2.p2	AF498925|GRB2|2885|growth factor receptor-bound protein 2	CR450363|GRB2|2885|growth factor receptor-bound protein 2	CR541942|GRB2|2885|growth factor receptor-bound protein 2	DQ891830|GRB2|2885|growth factor receptor-bound protein 2	DQ894923|GRB2|2885|growth factor receptor-bound protein 2	L29511|GRB2|2885|growth factor receptor-bound protein 2
hg18_v1_chr4_+_120167264_120167303	0.0685994	SOX2.p2	BX647849|SYNPO2|171024|synaptopodin 2
hg18_v1_chr1_+_167342149_167342306	0.0685606	SOX2.p2	CR596103|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide
hg18_v1_chr1_-_180627023_180627300	0.068556	SOX2.p2	NM_001033056|GLUL|2752|glutamate-ammonia ligase
hg18_v1_chr6_+_29472310_29472455	0.0685097	SOX2.p2	AJ459861|OR12D2|26529|olfactory receptor, family 12, subfamily D, member 2	BC101742|OR12D2|26529|olfactory receptor, family 12, subfamily D, member 2	BC101746|OR12D2|26529|olfactory receptor, family 12, subfamily D, member 2	NM_013936|OR12D2|26529|olfactory receptor, family 12, subfamily D, member 2	BC069123|OR12D2|26529|olfactory receptor, family 12, subfamily D, member 2
hg18_v1_chr11_-_125730622_125730642	0.0683172	SOX2.p2	
hg18_v1_chr7_+_23603495_23603585	0.0683054	SOX2.p2	NM_138771|CCDC126|90693|coiled-coil domain containing 126	AK289911|CCDC126|90693|coiled-coil domain containing 126	AY358713|CCDC126|90693|coiled-coil domain containing 126
hg18_v1_chr14_-_20179689_20179689	0.0682619	SOX2.p2	NM_001001968|OR6S1|341799|olfactory receptor, family 6, subfamily S, member 1
hg18_v1_chr3_+_35696119_35696282	0.0682573	SOX2.p2	AK055064|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	NM_001025068|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	NM_001025069|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	AK289868|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	AF112220|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	AK289649|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	AK294484|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa
hg18_v1_chr2_+_27652892_27652896	0.0682406	SOX2.p2	CR749335|C2orf16|84226|chromosome 2 open reading frame 16	NM_032266|C2orf16|84226|chromosome 2 open reading frame 16	BC140828|C2orf16|84226|chromosome 2 open reading frame 16
hg18_v1_chr8_+_11697588_11697598	0.0682401	SOX2.p2	NM_004462|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1
hg18_v1_chr21_-_42172476_42172659	0.0682266	SOX2.p2	AB051812|PRDM15|63977|PR domain containing 15	AB051813|PRDM15|63977|PR domain containing 15	AB051814|PRDM15|63977|PR domain containing 15	AB051815|PRDM15|63977|PR domain containing 15	NM_001040424|PRDM15|63977|PR domain containing 15	AF276513|PRDM15|63977|PR domain containing 15	AY078498|PRDM15|63977|PR domain containing 15	NM_022115|PRDM15|63977|PR domain containing 15
hg18_v1_chrX_+_79562601_79562635	0.0681835	SOX2.p2	BX537938|FAM46D|169966|family with sequence similarity 46, member D	NM_152630|FAM46D|169966|family with sequence similarity 46, member D	BC030784|FAM46D|169966|family with sequence similarity 46, member D	AK313875|FAM46D|169966|family with sequence similarity 46, member D	BC028710|FAM46D|169966|family with sequence similarity 46, member D	BC034979|FAM46D|169966|family with sequence similarity 46, member D
hg18_v1_chrX_+_100220491_100220527	0.0680708	SOX2.p2	NM_021637|TMEM35|59353|transmembrane protein 35	AK024146|TMEM35|59353|transmembrane protein 35	AK223240|TMEM35|59353|transmembrane protein 35	AK297745|TMEM35|59353|transmembrane protein 35	BC050273|TMEM35|59353|transmembrane protein 35	BC078658|TMEM35|59353|transmembrane protein 35
hg18_v1_chr5_-_14706486_14706500	0.0680421	SOX2.p2	
hg18_v1_chr1_+_945399_945413	0.0679164	SOX2.p2	
hg18_v1_chr12_-_56432375_56432375	0.0677113	SOX2.p2	AK297901|CDK4|1019|cyclin-dependent kinase 4
hg18_v1_chr7_-_99517128_99517398	0.0676446	SOX2.p2	BC011887|ZNF3|7551|zinc finger protein 3	BC025265|ZNF3|7551|zinc finger protein 3	BC013603|ZNF3|7551|zinc finger protein 3	AK297625|ZNF3|7551|zinc finger protein 3	AF193057|ZNF3|7551|zinc finger protein 3	AF217988|ZNF3|7551|zinc finger protein 3	AK315479|ZNF3|7551|zinc finger protein 3	AK091984|ZNF3|7551|zinc finger protein 3	CR616475|ZNF3|7551|zinc finger protein 3	NM_017715|ZNF3|7551|zinc finger protein 3	NM_032924|ZNF3|7551|zinc finger protein 3
hg18_v1_chr5_-_138238891_138238934	0.0676239	SOX2.p2	AK309790|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2	AB007876|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2	BC028172|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2	AK291064|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2	AK297332|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa
hg18_v1_chr11_+_440260_440333	0.0676184	SOX2.p2	BC001210|PTDSS2|81490|phosphatidylserine synthase 2	NM_030783|PTDSS2|81490|phosphatidylserine synthase 2
hg18_v1_chr4_-_155631861_155632004	0.0675842	SOX2.p2	AY354498|DCHS2|54798|dachsous 2 (Drosophila)	BC140919|DCHS2|54798|dachsous 2 (Drosophila)
hg18_v1_chr14_+_68728235_68728304	0.0674124	SOX2.p2	AK292563|EXD2|55218|exonuclease 3'-5' domain containing 2	NM_001193362|EXD2|55218|exonuclease 3'-5' domain containing 2	NM_001193363|EXD2|55218|exonuclease 3'-5' domain containing 2	AK295601|EXD2|55218|exonuclease 3'-5' domain containing 2	BX161412|EXD2|55218|exonuclease 3'-5' domain containing 2
hg18_v1_chr8_-_80842452_80842652	0.067389	SOX2.p2	AF311883|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	BT020065|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AF151522|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AF176422|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AJ272214|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	BC001873|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AK074641|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AK313271|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AF232239|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AK092437|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AK226041|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	CR622924|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AF254637|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	CR598609|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	NM_001040708|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	NM_012258|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1
hg18_v1_chr16_-_15742883_15743013	0.0672188	SOX2.p2	D10667|MYH11|4629|myosin, heavy chain 11, smooth muscle
hg18_v1_chr11_-_10786610_10786654	0.0672121	SOX2.p2	AK302886|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	AK310738|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2
hg18_v1_chr12_+_12829807_12829881	0.0671736	SOX2.p2	BC126433|APOLD1|81575|apolipoprotein L domain containing 1	BC126435|APOLD1|81575|apolipoprotein L domain containing 1	NM_030817|APOLD1|81575|apolipoprotein L domain containing 1	AK225176|APOLD1|81575|apolipoprotein L domain containing 1	AK314392|APOLD1|81575|apolipoprotein L domain containing 1	AL136783|APOLD1|81575|apolipoprotein L domain containing 1
hg18_v1_chr4_+_76868763_76868814	0.0671083	SOX2.p2	BC016672|USO1|8615|USO1 vesicle docking protein homolog (yeast)	AL832010|USO1|8615|USO1 vesicle docking protein homolog (yeast)	BC006398|USO1|8615|USO1 vesicle docking protein homolog (yeast)
hg18_v1_chr17_-_44022595_44022629	0.067078	SOX2.p2	AK315102|HOXB3|3213|homeobox B3	AK316245|HOXB3|3213|homeobox B3	AK291182|HOXB3|3213|homeobox B3
hg18_v1_chrX_+_52797004_52797070	0.0669311	SOX2.p2	BC103863|SSX2|6757|synovial sarcoma, X breakpoint 2	NM_001164417|SSX2B|727837|synovial sarcoma, X breakpoint 2B	NM_003147|SSX2|6757|synovial sarcoma, X breakpoint 2	NM_175698|SSX2|6757|synovial sarcoma, X breakpoint 2	Z49105|SSX2|6757|synovial sarcoma, X breakpoint 2	X86175|SSX2|6757|synovial sarcoma, X breakpoint 2	BC002818|SSX2|6757|synovial sarcoma, X breakpoint 2	BC007343|SSX2|6757|synovial sarcoma, X breakpoint 2	BC016957|SSX2|6757|synovial sarcoma, X breakpoint 2	BC071827|SSX2|6757|synovial sarcoma, X breakpoint 2
hg18_v1_chr5_-_110090264_110090348	0.0668562	SOX2.p2	AK296542|TMEM232|642987|transmembrane protein 232	BC042563|TMEM232|642987|transmembrane protein 232	BX648527|TMEM232|642987|transmembrane protein 232	NM_001039763|TMEM232|642987|transmembrane protein 232
hg18_v1_chrX_-_47815944_47815944	0.0668473	SOX2.p2	NM_001190255|ZNF630|57232|zinc finger protein 630
hg18_v1_chr20_+_54533191_54533230	0.066747	SOX2.p2	CR624258|C20orf106|200232|chromosome 20 open reading frame 106	NM_001012971|C20orf106|200232|chromosome 20 open reading frame 106	BC029411|C20orf106|200232|chromosome 20 open reading frame 106	BC105792|C20orf107|388799|chromosome 20 open reading frame 107	BC107704|C20orf106|200232|chromosome 20 open reading frame 106	BC070179|C20orf106|200232|chromosome 20 open reading frame 106
hg18_v1_chr6_+_131936057_131936115	0.0666596	SOX2.p2	AY074488|ARG1|383|arginase, liver	NM_000045|ARG1|383|arginase, liver	BC005321|ARG1|383|arginase, liver	M14502|ARG1|383|arginase, liver	CR615342|ARG1|383|arginase, liver	BC020653|ARG1|383|arginase, liver	DQ892039|ARG1|383|arginase, liver	DQ895230|ARG1|383|arginase, liver	BT006741|ARG1|383|arginase, liver
hg18_v1_chr4_+_159909658_159909813	0.0666141	SOX2.p2	AB040883|FNIP2|57600|folliculin interacting protein 2	AL713802|FNIP2|57600|folliculin interacting protein 2
hg18_v1_chr5_+_128468785_128468878	0.0666087	SOX2.p2	CR623281|ISOC1|51015|isochorismatase domain containing 1
hg18_v1_chr16_+_55523248_55523248	0.0665625	SOX2.p2	NM_001010989|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	NM_001010990|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	NM_014685|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1
hg18_v1_chr9_+_132961683_132961715	0.0665278	SOX2.p2	NM_001185095|AIF1L|83543|allograft inflammatory factor 1-like	NM_001185096|AIF1L|83543|allograft inflammatory factor 1-like	NM_031426|AIF1L|83543|allograft inflammatory factor 1-like
hg18_v1_chr17_-_44026321_44026411	0.0664105	SOX2.p2	M92299|HOXB5|3215|homeobox B5
hg18_v1_chr2_+_101235695_101235779	0.0664104	SOX2.p2	CR611582|C2orf29|55571|chromosome 2 open reading frame 29	NM_017546|C2orf29|55571|chromosome 2 open reading frame 29
hg18_v1_chr5_+_140166842_140166956	0.0663686	SOX2.p2	AB208925|PCDHA4|56144|protocadherin alpha 4	NM_018907|PCDHA4|56144|protocadherin alpha 4	NM_031500|PCDHA4|56144|protocadherin alpha 4	BC112102|PCDHA4|56144|protocadherin alpha 4	BC113609|PCDHA4|56144|protocadherin alpha 4	AF152312|PCDHA4|56144|protocadherin alpha 4	AF152482|PCDHA4|56144|protocadherin alpha 4
hg18_v1_chr3_-_14963943_14963978	0.0662476	SOX2.p2	
hg18_v1_chr7_+_107008439_107008453	0.0662376	SOX2.p2	NM_001008405|BCAP29|55973|B-cell receptor-associated protein 29	BT006981|BCAP29|55973|B-cell receptor-associated protein 29
hg18_v1_chr16_-_4263056_4263076	0.0660927	SOX2.p2	AK309301|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)
hg18_v1_chr3_+_39346200_39346298	0.0660528	SOX2.p2	AK314957|CCR8|1237|chemokine (C-C motif) receptor 8	NM_005201|CCR8|1237|chemokine (C-C motif) receptor 8	AF005210|CCR8|1237|chemokine (C-C motif) receptor 8	BC107152|CCR8|1237|chemokine (C-C motif) receptor 8	BC107159|CCR8|1237|chemokine (C-C motif) receptor 8	D49919|CCR8|1237|chemokine (C-C motif) receptor 8	BC074743|CCR8|1237|chemokine (C-C motif) receptor 8
hg18_v1_chr8_-_145122884_145122946	0.0658345	SOX2.p2	U53204|PLEC|5339|plectin	NM_000445|PLEC|5339|plectin
hg18_v1_chr5_+_112101454_112101490	0.0656974	SOX2.p2	NM_000038|APC|324|adenomatous polyposis coli	NM_001127510|APC|324|adenomatous polyposis coli	BC034955|APC|324|adenomatous polyposis coli	BC056268|APC|324|adenomatous polyposis coli	AB210001|APC|324|adenomatous polyposis coli
hg18_v1_chr20_-_1396336_1396416	0.0656084	SOX2.p2	AK093845|NSFL1C|55968|NSFL1 (p97) cofactor (p47)	NM_016143|NSFL1C|55968|NSFL1 (p97) cofactor (p47)	NM_018839|NSFL1C|55968|NSFL1 (p97) cofactor (p47)	NM_182483|NSFL1C|55968|NSFL1 (p97) cofactor (p47)
hg18_v1_chrX_+_119268518_119268711	0.0655604	SOX2.p2	BC042753|ZBTB33|10009|zinc finger and BTB domain containing 33	NM_006777|ZBTB33|10009|zinc finger and BTB domain containing 33	NM_001184742|ZBTB33|10009|zinc finger and BTB domain containing 33	BX538016|ZBTB33|10009|zinc finger and BTB domain containing 33	AL833604|ZBTB33|10009|zinc finger and BTB domain containing 33	AK312321|ZBTB33|10009|zinc finger and BTB domain containing 33	BX538101|ZBTB33|10009|zinc finger and BTB domain containing 33
hg18_v1_chr2_-_171631728_171631728	0.0654784	SOX2.p2	AK301857|TLK1|9874|tousled-like kinase 1	NM_001136555|TLK1|9874|tousled-like kinase 1
hg18_v1_chr20_+_31713750_31713802	0.0653954	SOX2.p2	DQ080434|C20orf144|128864|chromosome 20 open reading frame 144	CR617586|C20orf144|128864|chromosome 20 open reading frame 144	NM_080825|C20orf144|128864|chromosome 20 open reading frame 144	BC032818|C20orf144|128864|chromosome 20 open reading frame 144
hg18_v1_chr9_-_114814286_114814292	0.0653133	SOX2.p2	CR602666|ZNF883|169834|zinc finger protein 883	AK095843|ZNF883|169834|zinc finger protein 883	NM_001101338|ZNF883|169834|zinc finger protein 883
hg18_v1_chr9_-_125070613_125070669	0.0652695	SOX2.p2	AL833947|STRBP|55342|spermatid perinuclear RNA binding protein	AL834150|STRBP|55342|spermatid perinuclear RNA binding protein	BC017732|STRBP|55342|spermatid perinuclear RNA binding protein	NM_018387|STRBP|55342|spermatid perinuclear RNA binding protein
hg18_v1_chrX_-_13745134_13745152	0.0652212	SOX2.p2	AK095657|GPM6B|2824|glycoprotein M6B
hg18_v1_chr5_+_6767717_6767784	0.0649523	SOX2.p2	NM_001171805|PAPD7|11044|PAP associated domain containing 7	NM_006999|PAPD7|11044|PAP associated domain containing 7	AF089896|PAPD7|11044|PAP associated domain containing 7	BC084567|PAPD7|11044|PAP associated domain containing 7
hg18_v1_chr12_-_108399510_108399541	0.0648153	SOX2.p2	AK092170|KCTD10|83892|potassium channel tetramerisation domain containing 10	AK027543|KCTD10|83892|potassium channel tetramerisation domain containing 10	AY205299|KCTD10|83892|potassium channel tetramerisation domain containing 10	NM_031954|KCTD10|83892|potassium channel tetramerisation domain containing 10
hg18_v1_chr2_-_27187467_27187473	0.0647668	SOX2.p2	AK302185|CGREF1|10669|cell growth regulator with EF-hand domain 1	NM_001166241|CGREF1|10669|cell growth regulator with EF-hand domain 1
hg18_v1_chr5_+_180348450_180348564	0.0646103	SOX2.p2	NM_197975|BTNL3|10917|butyrophilin-like 3	AK025267|BTNL3|10917|butyrophilin-like 3	AY358385|BTNL3|10917|butyrophilin-like 3	BC100800|BTNL3|10917|butyrophilin-like 3	BC100801|BTNL3|10917|butyrophilin-like 3	BC100802|BTNL3|10917|butyrophilin-like 3
hg18_v1_chr4_-_83569572_83569642	0.0646082	SOX2.p2	CR604391|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR611909|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	AK294683|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR600214|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR606578|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR614785|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR614067|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR593853|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR594812|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR615355|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR615922|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR616930|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR605042|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	D89092|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like
hg18_v1_chr5_+_126140746_126140817	0.0644895	SOX2.p2	AK312603|LMNB1|4001|lamin B1	M34458|LMNB1|4001|lamin B1	CR609276|LMNB1|4001|lamin B1	BC012295|LMNB1|4001|lamin B1	BC078178|LMNB1|4001|lamin B1
hg18_v1_chr2_+_89849009_89849038	0.0644345	SOX2.p2	
hg18_v1_chr7_-_83108682_83108682	0.0643751	SOX2.p2	AK303925|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E	NM_001178129|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E
hg18_v1_chr6_-_47362102_47362179	0.0642881	SOX2.p2	AJ420531|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg18_v1_chr10_-_28611020_28611072	0.0642842	SOX2.p2	BC038105|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)	AK057360|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)	NM_173496|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)
hg18_v1_chr2_+_143603368_143603433	0.0641724	SOX2.p2	NM_018460|ARHGAP15|55843|Rho GTPase activating protein 15	AK308219|ARHGAP15|55843|Rho GTPase activating protein 15	AF212222|ARHGAP15|55843|Rho GTPase activating protein 15	AF217507|ARHGAP15|55843|Rho GTPase activating protein 15	AF217522|ARHGAP15|55843|Rho GTPase activating protein 15	AY219338|ARHGAP15|55843|Rho GTPase activating protein 15	AK226014|ARHGAP15|55843|Rho GTPase activating protein 15
hg18_v1_chr19_-_9087438_9087438	0.0641251	SOX2.p2	NM_001005192|OR7G1|125962|olfactory receptor, family 7, subfamily G, member 1
hg18_v1_chr7_-_93027057_93027057	0.0640792	SOX2.p2	AB022178|CALCR|799|calcitonin receptor	NM_001164738|CALCR|799|calcitonin receptor
hg18_v1_chr5_+_137701601_137701713	0.0640614	SOX2.p2	NM_016605|FAM53C|51307|family with sequence similarity 53, member C
hg18_v1_chrX_-_49852397_49852403	0.0640562	SOX2.p2	AK292463|AKAP4|8852|A kinase (PRKA) anchor protein 4	BC126250|AKAP4|8852|A kinase (PRKA) anchor protein 4	BC126252|AKAP4|8852|A kinase (PRKA) anchor protein 4	NM_003886|AKAP4|8852|A kinase (PRKA) anchor protein 4	Y15195|AKAP4|8852|A kinase (PRKA) anchor protein 4
hg18_v1_chr3_+_198960820_198960820	0.0640119	SOX2.p2	AK303462|FYTTD1|84248|forty-two-three domain containing 1	NM_001011537|FYTTD1|84248|forty-two-three domain containing 1
hg18_v1_chr17_+_11864841_11864972	0.0640103	SOX2.p2	BC036032|MAP2K4|6416|mitogen-activated protein kinase kinase 4	NM_003010|MAP2K4|6416|mitogen-activated protein kinase kinase 4	BC060764|MAP2K4|6416|mitogen-activated protein kinase kinase 4	AK131544|MAP2K4|6416|mitogen-activated protein kinase kinase 4	AK313053|MAP2K4|6416|mitogen-activated protein kinase kinase 4	U17743|MAP2K4|6416|mitogen-activated protein kinase kinase 4	AK294923|MAP2K4|6416|mitogen-activated protein kinase kinase 4	L36870|MAP2K4|6416|mitogen-activated protein kinase kinase 4	BC050386|MAP2K4|6416|mitogen-activated protein kinase kinase 4	BT019676|MAP2K4|6416|mitogen-activated protein kinase kinase 4	CR536564|MAP2K4|6416|mitogen-activated protein kinase kinase 4
hg18_v1_chr5_+_10406980_10407037	0.0639157	SOX2.p2	
hg18_v1_chr12_+_52132353_52132414	0.0637586	SOX2.p2	AK292141|PCBP2|5094|poly(rC) binding protein 2	CR602496|PCBP2|5094|poly(rC) binding protein 2	BC001155|PCBP2|5094|poly(rC) binding protein 2
hg18_v1_chr4_+_83570749_83570788	0.0636706	SOX2.p2	NM_021204|ENOPH1|58478|enolase-phosphatase 1	AF087881|ENOPH1|58478|enolase-phosphatase 1	AF113125|ENOPH1|58478|enolase-phosphatase 1
hg18_v1_chr5_+_180399830_180399856	0.0636368	SOX2.p2	NM_152547|BTNL9|153579|butyrophilin-like 9	AK057097|BTNL9|153579|butyrophilin-like 9	AY358358|BTNL9|153579|butyrophilin-like 9
hg18_v1_chr5_-_150118747_150118849	0.0635003	SOX2.p2	DQ892339|DCTN4|51164|dynactin 4 (p62)	DQ895544|DCTN4|51164|dynactin 4 (p62)	AF195120|DCTN4|51164|dynactin 4 (p62)	AK000299|DCTN4|51164|dynactin 4 (p62)	AK296787|DCTN4|51164|dynactin 4 (p62)	BC026323|DCTN4|51164|dynactin 4 (p62)	AK311693|DCTN4|51164|dynactin 4 (p62)	AK307757|DCTN4|51164|dynactin 4 (p62)	NM_001135643|DCTN4|51164|dynactin 4 (p62)	NM_016221|DCTN4|51164|dynactin 4 (p62)
hg18_v1_chr9_+_4829763_4829773	0.06344	SOX2.p2	EF553527|RCL1|10171|RNA terminal phosphate cyclase-like 1
hg18_v1_chr11_-_5662762_5662917	0.0631857	SOX2.p2	BC021258|TRIM5|85363|tripartite motif containing 5	CR616862|TRIM5|85363|tripartite motif containing 5	BX647152|TRIM5|85363|tripartite motif containing 5	AK027593|TRIM5|85363|tripartite motif containing 5	NM_033034|TRIM5|85363|tripartite motif containing 5	NM_033092|TRIM5|85363|tripartite motif containing 5	NM_033093|TRIM5|85363|tripartite motif containing 5
hg18_v1_chr17_-_44037332_44037355	0.0631528	SOX2.p2	BC014651|HOXB6|3216|homeobox B6	NM_018952|HOXB6|3216|homeobox B6	AK292200|HOXB6|3216|homeobox B6
hg18_v1_chr17_-_53420595_53420639	0.0628969	SOX2.p2	NM_007146|VEZF1|7716|vascular endothelial zinc finger 1
hg18_v1_chr15_+_73278285_73278314	0.0628777	SOX2.p2	AK128205|C15orf39|56905|chromosome 15 open reading frame 39
hg18_v1_chr7_+_148475618_148475766	0.0628493	SOX2.p2	AY049744|ZNF398|57541|zinc finger protein 398
hg18_v1_chr3_+_99671013_99671110	0.0627691	SOX2.p2	BC136918|OR5K1|26339|olfactory receptor, family 5, subfamily K, member 1	BC136919|OR5K1|26339|olfactory receptor, family 5, subfamily K, member 1	NM_001004736|OR5K1|26339|olfactory receptor, family 5, subfamily K, member 1
hg18_v1_chr3_-_12561962_12561962	0.0627573	SOX2.p2	NM_001195279|LOC100129480|100129480|hypothetical protein LOC100129480
hg18_v1_chr17_+_59031950_59031979	0.0627526	SOX2.p2	AK315375|TACO1|51204|translational activator of mitochondrially encoded cytochrome c oxidase I	NM_016360|TACO1|51204|translational activator of mitochondrially encoded cytochrome c oxidase I	AK094052|TACO1|51204|translational activator of mitochondrially encoded cytochrome c oxidase I	BC005049|TACO1|51204|translational activator of mitochondrially encoded cytochrome c oxidase I
hg18_v1_chr2_+_170298487_170298676	0.0626681	SOX2.p2	
hg18_v1_chr1_+_15883425_15883637	0.0625986	SOX2.p2	AB020649|PLEKHM2|23207|pleckstrin homology domain containing, family M (with RUN domain) member 2
hg18_v1_chr1_-_158161902_158161920	0.0624336	SOX2.p2	CR604476|TAGLN2|8407|transgelin 2	CR608575|TAGLN2|8407|transgelin 2	CR610006|TAGLN2|8407|transgelin 2	CR613520|TAGLN2|8407|transgelin 2	BC002616|TAGLN2|8407|transgelin 2	CR592747|TAGLN2|8407|transgelin 2	CR607855|TAGLN2|8407|transgelin 2	CR608199|TAGLN2|8407|transgelin 2	CR608276|TAGLN2|8407|transgelin 2	CR609748|TAGLN2|8407|transgelin 2	CR613098|TAGLN2|8407|transgelin 2	CR618095|TAGLN2|8407|transgelin 2	CR620277|TAGLN2|8407|transgelin 2	CR599010|TAGLN2|8407|transgelin 2	CR620855|TAGLN2|8407|transgelin 2	CR624026|TAGLN2|8407|transgelin 2	CR618563|TAGLN2|8407|transgelin 2	CR602105|TAGLN2|8407|transgelin 2	CR614100|TAGLN2|8407|transgelin 2	D21261|TAGLN2|8407|transgelin 2	NM_003564|TAGLN2|8407|transgelin 2	CR590142|TAGLN2|8407|transgelin 2	AK291562|TAGLN2|8407|transgelin 2	AK298654|TAGLN2|8407|transgelin 2
hg18_v1_chr15_+_72861767_72862051	0.0623745	SOX2.p2	X60114|CSK|1445|c-src tyrosine kinase	AK298245|CSK|1445|c-src tyrosine kinase	AK223626|CSK|1445|c-src tyrosine kinase	AK310136|CSK|1445|c-src tyrosine kinase	AK312669|CSK|1445|c-src tyrosine kinase	BC104847|CSK|1445|c-src tyrosine kinase	BC104875|CSK|1445|c-src tyrosine kinase	X59932|CSK|1445|c-src tyrosine kinase
hg18_v1_chr1_-_183392442_183392739	0.0622642	SOX2.p2	AK226103|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	AF288399|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	AK074936|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	BC045535|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	BC053961|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	BC026883|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	BC035430|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	BC039738|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	AK098359|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	AK312801|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	AK074993|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	NM_030934|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like
hg18_v1_chr2_+_181554048_181554097	0.0622228	SOX2.p2	AK314145|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)
hg18_v1_chr19_-_56585603_56585672	0.0621782	SOX2.p2	BC085012|LOC147646|147646|hypothetical protein LOC147646	BC043532|LOC147646|147646|hypothetical protein LOC147646	NM_001193623|LOC147646|147646|hypothetical protein LOC147646
hg18_v1_chr4_+_100651183_100651222	0.0621474	SOX2.p2	NM_032149|C4orf17|84103|chromosome 4 open reading frame 17	AK093085|C4orf17|84103|chromosome 4 open reading frame 17	AK223345|C4orf17|84103|chromosome 4 open reading frame 17	AK314711|C4orf17|84103|chromosome 4 open reading frame 17	AL136838|C4orf17|84103|chromosome 4 open reading frame 17
hg18_v1_chr7_-_107930170_107930246	0.0620312	SOX2.p2	BC005203|PNPLA8|50640|patatin-like phospholipase domain containing 8	AK002115|PNPLA8|50640|patatin-like phospholipase domain containing 8
hg18_v1_chr16_+_66433882_66434085	0.0620263	SOX2.p2	L10378|THAP11|57215|THAP domain containing 11	L10379|THAP11|57215|THAP domain containing 11	DQ892600|THAP11|57215|THAP domain containing 11	DQ895831|THAP11|57215|THAP domain containing 11	EF036502|THAP11|57215|THAP domain containing 11
hg18_v1_chr11_+_111313227_111313360	0.0619606	SOX2.p2	BC035509|DIXDC1|85458|DIX domain containing 1	BC064479|DIXDC1|85458|DIX domain containing 1	BC128600|DIXDC1|85458|DIX domain containing 1
hg18_v1_chr6_-_107542328_107542328	0.0618637	SOX2.p2	BC131628|BEND3|57673|BEN domain containing 3	NM_001080450|BEND3|57673|BEN domain containing 3
hg18_v1_chr5_+_140541163_140541163	0.0618487	SOX2.p2	AB046841|PCDHB16|57717|protocadherin beta 16	NM_020957|PCDHB16|57717|protocadherin beta 16
hg18_v1_chr12_-_102413875_102413878	0.0618053	SOX2.p2	AK058052|C12orf42|374470|chromosome 12 open reading frame 42	BC039352|C12orf42|374470|chromosome 12 open reading frame 42	BC117392|C12orf42|374470|chromosome 12 open reading frame 42	BC117394|C12orf42|374470|chromosome 12 open reading frame 42	NM_198521|C12orf42|374470|chromosome 12 open reading frame 42	BC044617|C12orf42|374470|chromosome 12 open reading frame 42	NM_001099336|C12orf42|374470|chromosome 12 open reading frame 42
hg18_v1_chr3_+_46591048_46591048	0.0617314	SOX2.p2	NM_001174136|TDGF1|6997|teratocarcinoma-derived growth factor 1
hg18_v1_chr1_+_43410587_43410679	0.0617139	SOX2.p2	NM_001167965|WDR65|149465|WD repeat domain 65	NM_152498|WDR65|149465|WD repeat domain 65	NM_001167966|WDR65|149465|WD repeat domain 65	AK056562|WDR65|149465|WD repeat domain 65	BC117280|WDR65|149465|WD repeat domain 65	BC117306|WDR65|149465|WD repeat domain 65	BC143804|WDR65|149465|WD repeat domain 65
hg18_v1_chr1_+_224317062_224317110	0.0617098	SOX2.p2	CR595231|LOC440926|440926|H3 histone, family 3A pseudogene	CR611775|LOC440926|440926|H3 histone, family 3A pseudogene	CR616667|LOC440926|440926|H3 histone, family 3A pseudogene	CR594323|LOC440926|440926|H3 histone, family 3A pseudogene	CR594694|H3F3A|3020|H3 histone, family 3A	CR604105|LOC440926|440926|H3 histone, family 3A pseudogene	CR613651|LOC440926|440926|H3 histone, family 3A pseudogene
hg18_v1_chr1_-_174442736_174442840	0.0616948	SOX2.p2	AF508940|RFWD2|64326|ring finger and WD repeat domain 2	AY509921|RFWD2|64326|ring finger and WD repeat domain 2
hg18_v1_chr21_-_31332665_31332665	0.0614391	SOX2.p2	AB096964|KRTAP19-8|728299|keratin associated protein 19-8	NM_001099219|KRTAP19-8|728299|keratin associated protein 19-8
hg18_v1_chr1_+_182287388_182287578	0.0613367	SOX2.p2	AF288394|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	NM_001127394|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	NM_052965|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	CR612120|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	BC022030|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	CR606046|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	CR620942|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	AK098196|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	AK296655|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	AK307241|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)
hg18_v1_chr1_+_199742906_199743063	0.0613304	SOX2.p2	
hg18_v1_chr9_-_93750916_93750982	0.0612462	SOX2.p2	BC033697|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2
hg18_v1_chr7_+_55400634_55400634	0.0612088	SOX2.p2	AK095857|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	NM_018697|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)
hg18_v1_chr15_+_74416129_74416154	0.0611759	SOX2.p2	CR610026|ISL2|64843|ISL LIM homeobox 2
hg18_v1_chr9_-_87904844_87904965	0.0611353	SOX2.p2	AK075557|GOLM1|51280|golgi membrane protein 1	AK092943|GOLM1|51280|golgi membrane protein 1	NM_177937|GOLM1|51280|golgi membrane protein 1
hg18_v1_chr12_-_120218926_120219091	0.0610671	SOX2.p2	NM_172226|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta
hg18_v1_chr6_+_80771108_80771128	0.0610557	SOX2.p2	AK315696|TTK|7272|TTK protein kinase
hg18_v1_chr11_-_55942283_55942283	0.0609653	SOX2.p2	NM_001004744|OR5R1|219479|olfactory receptor, family 5, subfamily R, member 1
hg18_v1_chr5_-_134762695_134762732	0.0609367	SOX2.p2	AF041483|H2AFY|9555|H2A histone family, member Y
hg18_v1_chr1_-_33587998_33588083	0.0609188	SOX2.p2	AK128821|PHC2|1912|polyhomeotic homolog 2 (Drosophila)	BC028396|PHC2|1912|polyhomeotic homolog 2 (Drosophila)	BC018602|PHC2|1912|polyhomeotic homolog 2 (Drosophila)
hg18_v1_chr3_-_47909001_47909068	0.0609187	SOX2.p2	AK054696|MAP4|4134|microtubule-associated protein 4
hg18_v1_chr3_-_25680723_25681235	0.0608705	SOX2.p2	NM_001068|TOP2B|7155|topoisomerase (DNA) II beta 180kDa	X68060|TOP2B|7155|topoisomerase (DNA) II beta 180kDa	Z15111|TOP2B|7155|topoisomerase (DNA) II beta 180kDa
hg18_v1_chr2_+_218992053_218992116	0.0608499	SOX2.p2	NM_007127|VIL1|7429|villin 1	AK223398|VIL1|7429|villin 1	AK300965|VIL1|7429|villin 1	AK313709|VIL1|7429|villin 1
hg18_v1_chr2_+_100453375_100453375	0.0608198	SOX2.p2	AB164464|NMS|129521|neuromedin S	NM_001011717|NMS|129521|neuromedin S
hg18_v1_chr11_-_111539881_111540056	0.0608173	SOX2.p2	AF380360|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)	AY044641|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)	AY266351|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)	D49950|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)	BC007007|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)	AK311301|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)	BC007461|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)	NM_001562|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)
hg18_v1_chr5_-_134762764_134762783	0.060791	SOX2.p2	CR624606|H2AFY|9555|H2A histone family, member Y	CR607311|H2AFY|9555|H2A histone family, member Y
hg18_v1_chr5_-_150663519_150663526	0.0606919	SOX2.p2	AK127978|SLC36A3|285641|solute carrier family 36 (proton/amino acid symporter), member 3	NM_001145017|SLC36A3|285641|solute carrier family 36 (proton/amino acid symporter), member 3	NM_181774|SLC36A3|285641|solute carrier family 36 (proton/amino acid symporter), member 3
hg18_v1_chr8_+_61592048_61592048	0.060682	SOX2.p2	AK297576|RAB2A|5862|RAB2A, member RAS oncogene family
hg18_v1_chr4_+_1842947_1843045	0.0606576	SOX2.p2	BC052254|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1	BC020545|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1	BC032731|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1
hg18_v1_chr10_-_21847126_21847194	0.0606264	SOX2.p2	
hg18_v1_chr19_-_11477395_11477659	0.0605493	SOX2.p2	AY072704|ZNF653|115950|zinc finger protein 653	BC014187|ZNF653|115950|zinc finger protein 653	AK314986|ZNF653|115950|zinc finger protein 653	BC016816|ZNF653|115950|zinc finger protein 653
hg18_v1_chr13_-_45087859_45087874	0.060479	SOX2.p2	BC131494|FAM194B|220081|family with sequence similarity 194, member B	AK057244|FAM194B|220081|family with sequence similarity 194, member B	NM_182542|FAM194B|220081|family with sequence similarity 194, member B
hg18_v1_chr4_-_141294682_141294883	0.0603879	SOX2.p2	NM_018717|MAML3|55534|mastermind-like 3 (Drosophila)
hg18_v1_chr14_+_95915774_95915774	0.060325	SOX2.p2	BC004818|C14orf129|51527|chromosome 14 open reading frame 129	NM_016472|C14orf129|51527|chromosome 14 open reading frame 129
hg18_v1_chr22_+_18081968_18082117	0.0603041	SOX2.p2	CR605683|SEPT5|5413|septin 5	CR609437|SEPT5|5413|septin 5	NM_002688|SEPT5|5413|septin 5	CR608884|SEPT5|5413|septin 5	CR608991|SEPT5|5413|septin 5	BC025261|SEPT5|5413|septin 5	U74628|SEPT5|5413|septin 5	CR619352|SEPT5|5413|septin 5	CR610263|SEPT5|5413|septin 5	U85431|SEPT5|5413|septin 5	Y11593|SEPT5|5413|septin 5	CR597468|SEPT5|5413|septin 5	CR456545|SEPT5|5413|septin 5	CU013145|SEPT5|5413|septin 5	CU013433|SEPT5|5413|septin 5	AK295940|SEPT5|5413|septin 5
hg18_v1_chr19_+_3523903_3523949	0.0601386	SOX2.p2	NM_006339|HMG20B|10362|high-mobility group 20B
hg18_v1_chr5_-_95184121_95184197	0.0601142	SOX2.p2	AF162769|GLRX|2745|glutaredoxin (thioltransferase)	BT006689|GLRX|2745|glutaredoxin (thioltransferase)	CR450312|GLRX|2745|glutaredoxin (thioltransferase)	CR542165|GLRX|2745|glutaredoxin (thioltransferase)	DQ892497|GLRX|2745|glutaredoxin (thioltransferase)	DQ895709|GLRX|2745|glutaredoxin (thioltransferase)	D21238|GLRX|2745|glutaredoxin (thioltransferase)	AF069668|GLRX|2745|glutaredoxin (thioltransferase)	CR618562|GLRX|2745|glutaredoxin (thioltransferase)	BC106075|GLRX|2745|glutaredoxin (thioltransferase)	X76648|GLRX|2745|glutaredoxin (thioltransferase)	AK311868|GLRX|2745|glutaredoxin (thioltransferase)	BC005304|GLRX|2745|glutaredoxin (thioltransferase)	BC010965|GLRX|2745|glutaredoxin (thioltransferase)	CR611519|GLRX|2745|glutaredoxin (thioltransferase)
hg18_v1_chr2_+_181553783_181553926	0.0601041	SOX2.p2	CR603132|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)	AF085362|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)	BC003554|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)	AB017644|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)
hg18_v1_chr5_+_34692124_34692216	0.0600095	SOX2.p2	NM_001145522|RAI14|26064|retinoic acid induced 14	NM_015577|RAI14|26064|retinoic acid induced 14
hg18_v1_chr1_-_17638729_17638795	0.0598846	SOX2.p2	AB040903|RCC2|55920|regulator of chromosome condensation 2
hg18_v1_chr19_+_3831617_3831653	0.0598303	SOX2.p2	NM_033064|ATCAY|85300|ataxia, cerebellar, Cayman type
hg18_v1_chr11_-_5819702_5819702	0.0598293	SOX2.p2	NM_001005167|OR52E6|390078|olfactory receptor, family 52, subfamily E, member 6
hg18_v1_chr21_-_33935883_33936029	0.0597197	SOX2.p2	BC033023|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	AK315707|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	AF029689|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	AF098798|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	BC022827|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	BC013155|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	BX647276|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	BX648547|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	AK001293|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	NM_145858|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1
hg18_v1_chr4_-_54625463_54625521	0.0596819	SOX2.p2	AF159423|CHIC2|26511|cysteine-rich hydrophobic domain 2	BC034691|CHIC2|26511|cysteine-rich hydrophobic domain 2
hg18_v1_chr14_-_54948290_54948328	0.0594866	SOX2.p2	BC028015|ATG14|22863|ATG14 autophagy related 14 homolog (S. cerevisiae)	AK292810|ATG14|22863|ATG14 autophagy related 14 homolog (S. cerevisiae)	BC109089|ATG14|22863|ATG14 autophagy related 14 homolog (S. cerevisiae)	BC109090|ATG14|22863|ATG14 autophagy related 14 homolog (S. cerevisiae)	AK131251|ATG14|22863|ATG14 autophagy related 14 homolog (S. cerevisiae)	NM_014924|ATG14|22863|ATG14 autophagy related 14 homolog (S. cerevisiae)
hg18_v1_chr17_+_58625086_58625100	0.0594086	SOX2.p2	BC144357|TANC2|26115|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
hg18_v1_chr19_-_17275083_17275281	0.0593778	SOX2.p2	BC020173|ABHD8|79575|abhydrolase domain containing 8	BC039087|ABHD8|79575|abhydrolase domain containing 8	BC007895|ABHD8|79575|abhydrolase domain containing 8	AK225140|ABHD8|79575|abhydrolase domain containing 8	CR618792|ABHD8|79575|abhydrolase domain containing 8	AK315366|ABHD8|79575|abhydrolase domain containing 8	AK021805|ABHD8|79575|abhydrolase domain containing 8	AK225340|ABHD8|79575|abhydrolase domain containing 8	AK298251|ABHD8|79575|abhydrolase domain containing 8	NM_024527|ABHD8|79575|abhydrolase domain containing 8
hg18_v1_chr5_-_122786902_122787184	0.0593727	SOX2.p2	BC040527|CEP120|153241|centrosomal protein 120kDa	BC144558|CEP120|153241|centrosomal protein 120kDa	AK296999|CEP120|153241|centrosomal protein 120kDa	AK095646|CEP120|153241|centrosomal protein 120kDa	NM_001166226|CEP120|153241|centrosomal protein 120kDa	NM_153223|CEP120|153241|centrosomal protein 120kDa
hg18_v1_chr9_+_114288899_114289068	0.0593453	SOX2.p2	AK096613|KIAA1958|158405|KIAA1958	NM_133465|KIAA1958|158405|KIAA1958
hg18_v1_chr15_+_94676691_94676797	0.0592755	SOX2.p2	CR601286|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	AK316086|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	NM_001145156|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2
hg18_v1_chr4_+_88939725_88939765	0.0592523	SOX2.p2	NM_004967|IBSP|3381|integrin-binding sialoprotein	J05213|IBSP|3381|integrin-binding sialoprotein
hg18_v1_chr11_-_62231636_62231775	0.0592497	SOX2.p2	NM_001122955|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)
hg18_v1_chrX_-_135783496_135783554	0.0592112	SOX2.p2	
hg18_v1_chrX_+_153318662_153318794	0.0590992	SOX2.p2	AK294893|GDI1|2664|GDP dissociation inhibitor 1	AK295306|GDI1|2664|GDP dissociation inhibitor 1	AK303248|GDI1|2664|GDP dissociation inhibitor 1	AL833629|GDI1|2664|GDP dissociation inhibitor 1	AK090746|GDI1|2664|GDP dissociation inhibitor 1	BC012201|GDI1|2664|GDP dissociation inhibitor 1	X79353|GDI1|2664|GDP dissociation inhibitor 1	BC000317|GDI1|2664|GDP dissociation inhibitor 1	D45021|GDI1|2664|GDP dissociation inhibitor 1	AF400433|GDI1|2664|GDP dissociation inhibitor 1	AM392660|GDI1|2664|GDP dissociation inhibitor 1	AM393226|GDI1|2664|GDP dissociation inhibitor 1	AM393601|GDI1|2664|GDP dissociation inhibitor 1	DQ892049|GDI1|2664|GDP dissociation inhibitor 1	DQ895243|GDI1|2664|GDP dissociation inhibitor 1	DQ896843|GDI1|2664|GDP dissociation inhibitor 1	AB102647|GDI1|2664|GDP dissociation inhibitor 1	BT019884|GDI1|2664|GDP dissociation inhibitor 1	CR542258|GDI1|2664|GDP dissociation inhibitor 1	CR542276|GDI1|2664|GDP dissociation inhibitor 1
hg18_v1_chr4_+_154345039_154345071	0.0589393	SOX2.p2	AK308731|TRIM2|23321|tripartite motif containing 2	NM_015271|TRIM2|23321|tripartite motif containing 2	AB011089|TRIM2|23321|tripartite motif containing 2	AF220018|TRIM2|23321|tripartite motif containing 2
hg18_v1_chr11_+_46256130_46256143	0.058883	SOX2.p2	BC014097|CREB3L1|90993|cAMP responsive element binding protein 3-like 1	BC015781|CREB3L1|90993|cAMP responsive element binding protein 3-like 1	AB063321|CREB3L1|90993|cAMP responsive element binding protein 3-like 1
hg18_v1_chr18_+_27332024_27332258	0.0588518	SOX2.p2	NM_001943|DSG2|1829|desmoglein 2	BC099655|DSG2|1829|desmoglein 2	BC099656|DSG2|1829|desmoglein 2	BC099657|DSG2|1829|desmoglein 2	Z26317|DSG2|1829|desmoglein 2	AK308408|DSG2|1829|desmoglein 2
hg18_v1_chr11_+_93501811_93502126	0.058819	SOX2.p2	AY359023|PANX1|24145|pannexin 1	FM201789|PANX1|24145|pannexin 1
hg18_v1_chr17_-_3518568_3518627	0.0586837	SOX2.p2	AF277318|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	U90913|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	CR607043|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	CR619400|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	CR606577|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	CR609956|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	CR591740|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	CR601638|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	CR602958|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	AF234997|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	AK001327|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	AK315408|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	BC023980|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	CR606404|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3
hg18_v1_chr2_+_161981046_161981089	0.0586513	SOX2.p2	AK297438|TBR1|10716|T-box, brain, 1	AK312567|TBR1|10716|T-box, brain, 1	AK226050|TBR1|10716|T-box, brain, 1	BC029289|TBR1|10716|T-box, brain, 1
hg18_v1_chr2_-_162717159_162717159	0.0586201	SOX2.p2	NM_002054|GCG|2641|glucagon
hg18_v1_chr14_-_68689623_68689713	0.0586139	SOX2.p2	NM_003861|DCAF5|8816|DDB1 and CUL4 associated factor 5
hg18_v1_chr19_+_3831675_3831686	0.0585795	SOX2.p2	BC026217|ATCAY|85300|ataxia, cerebellar, Cayman type	AK027889|ATCAY|85300|ataxia, cerebellar, Cayman type	AK092309|ATCAY|85300|ataxia, cerebellar, Cayman type	AK299522|ATCAY|85300|ataxia, cerebellar, Cayman type
hg18_v1_chr6_-_33364727_33364775	0.0580072	SOX2.p2	CR597118|WDR46|9277|WD repeat domain 46
hg18_v1_chr6_+_64340408_64340597	0.0579335	SOX2.p2	BC023975|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1	CR602427|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1
hg18_v1_chr8_+_26491838_26491851	0.0579194	SOX2.p2	AK299077|DPYSL2|1808|dihydropyrimidinase-like 2
hg18_v1_chr10_+_70418482_70418600	0.0578955	SOX2.p2	NM_015634|KIAA1279|26128|KIAA1279	AB033105|KIAA1279|26128|KIAA1279	BC006427|KIAA1279|26128|KIAA1279	CR593211|KIAA1279|26128|KIAA1279	AK291343|KIAA1279|26128|KIAA1279	BC012180|KIAA1279|26128|KIAA1279
hg18_v1_chr6_-_83960351_83960412	0.0578705	SOX2.p2	AK301867|PGM3|5238|phosphoglucomutase 3
hg18_v1_chr1_-_158161898_158161900	0.0577668	SOX2.p2	CR623657|TAGLN2|8407|transgelin 2	CR609777|TAGLN2|8407|transgelin 2	CR621369|TAGLN2|8407|transgelin 2
hg18_v1_chr6_+_123142344_123142452	0.0577553	SOX2.p2	NM_001446|FABP7|2173|fatty acid binding protein 7, brain	BC012299|FABP7|2173|fatty acid binding protein 7, brain
hg18_v1_chr1_+_22252385_22252400	0.0576839	SOX2.p2	AL121737|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)
hg18_v1_chr1_-_152422322_152422348	0.0575483	SOX2.p2	AK298678|TPM3|7170|tropomyosin 3	NM_001043351|TPM3|7170|tropomyosin 3	NM_001043352|TPM3|7170|tropomyosin 3	NM_001043353|TPM3|7170|tropomyosin 3	NM_153649|TPM3|7170|tropomyosin 3
hg18_v1_chr1_+_120055941_120056168	0.0575307	SOX2.p2	NM_006623|PHGDH|26227|phosphoglycerate dehydrogenase	AK315360|PHGDH|26227|phosphoglycerate dehydrogenase	BC011262|PHGDH|26227|phosphoglycerate dehydrogenase	CR617402|PHGDH|26227|phosphoglycerate dehydrogenase	AK309662|PHGDH|26227|phosphoglycerate dehydrogenase	AK310132|PHGDH|26227|phosphoglycerate dehydrogenase	AF171237|PHGDH|26227|phosphoglycerate dehydrogenase	CR619716|PHGDH|26227|phosphoglycerate dehydrogenase	BC000303|PHGDH|26227|phosphoglycerate dehydrogenase	CR592544|PHGDH|26227|phosphoglycerate dehydrogenase	CR611188|PHGDH|26227|phosphoglycerate dehydrogenase	CR622574|PHGDH|26227|phosphoglycerate dehydrogenase	BC001349|PHGDH|26227|phosphoglycerate dehydrogenase	CR600485|PHGDH|26227|phosphoglycerate dehydrogenase	CR612347|PHGDH|26227|phosphoglycerate dehydrogenase	CR616251|PHGDH|26227|phosphoglycerate dehydrogenase	BC023235|PHGDH|26227|phosphoglycerate dehydrogenase	DQ892073|PHGDH|26227|phosphoglycerate dehydrogenase	EU176546|PHGDH|26227|phosphoglycerate dehydrogenase	CR456795|PHGDH|26227|phosphoglycerate dehydrogenase
hg18_v1_chr3_-_130373241_130373306	0.0575099	SOX2.p2	BT019613|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein	CR596443|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein	CR597317|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein	CR606309|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein	CR610184|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein	CR614312|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein	CR626515|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein
hg18_v1_chr22_-_40666168_40666168	0.0573735	SOX2.p2	EU035297|CENPM|79019|centromere protein M	NM_001110215|CENPM|79019|centromere protein M
hg18_v1_chr2_+_108637916_108637940	0.0573253	SOX2.p2	AK302411|LIMS1|3987|LIM and senescent cell antigen-like domains 1	AK312178|LIMS3|96626|LIM and senescent cell antigen-like domains 3	BC054477|LIMS3|96626|LIM and senescent cell antigen-like domains 3	BC093812|LIMS3|96626|LIM and senescent cell antigen-like domains 3	BC112233|LIMS3|96626|LIM and senescent cell antigen-like domains 3
hg18_v1_chr1_+_26896519_26896593	0.0571775	SOX2.p2	AB210022|ARID1A|8289|AT rich interactive domain 1A (SWI-like)	AF219114|ARID1A|8289|AT rich interactive domain 1A (SWI-like)	AF265208|ARID1A|8289|AT rich interactive domain 1A (SWI-like)
hg18_v1_chr5_-_142057692_142057818	0.057106	SOX2.p2	M60515|FGF1|2246|fibroblast growth factor 1 (acidic)	AK289762|FGF1|2246|fibroblast growth factor 1 (acidic)	DQ655917|FGF1|2246|fibroblast growth factor 1 (acidic)	NM_001144934|FGF1|2246|fibroblast growth factor 1 (acidic)	NM_001144935|FGF1|2246|fibroblast growth factor 1 (acidic)
hg18_v1_chr7_+_50106227_50106227	0.0570842	SOX2.p2	NM_001161834|C7orf72|100130988|chromosome 7 open reading frame 72
hg18_v1_chr3_-_15814678_15814694	0.0570759	SOX2.p2	AK293770|ANKRD28|23243|ankyrin repeat domain 28	NM_001195098|ANKRD28|23243|ankyrin repeat domain 28
hg18_v1_chr11_-_63292688_63292857	0.0570034	SOX2.p2	NM_001144936|C11orf95|65998|chromosome 11 open reading frame 95
hg18_v1_chr11_+_125730760_125730771	0.0569733	SOX2.p2	CR603316|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4	CR613427|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4	CR620801|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4
hg18_v1_chr15_-_42743124_42743148	0.0569575	SOX2.p2	AB470308|SPG11|80208|spastic paraplegia 11 (autosomal recessive)	AB470309|SPG11|80208|spastic paraplegia 11 (autosomal recessive)	AB470310|SPG11|80208|spastic paraplegia 11 (autosomal recessive)	AB058743|SPG11|80208|spastic paraplegia 11 (autosomal recessive)	BC153879|SPG11|80208|spastic paraplegia 11 (autosomal recessive)	BC047416|SPG11|80208|spastic paraplegia 11 (autosomal recessive)
hg18_v1_chr6_-_88468368_88468394	0.0569341	SOX2.p2	BC005051|AKIRIN2|55122|akirin 2
hg18_v1_chr21_+_39099717_39099777	0.0568475	SOX2.p2	NM_005239|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)	BC042954|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)	AK315563|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)	BC017040|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)
hg18_v1_chr6_-_31618203_31618203	0.0567932	SOX2.p2	NM_004640|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	NM_080598|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B
hg18_v1_chr3_+_188131209_188131334	0.056706	SOX2.p2	X17247|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1
hg18_v1_chrX_-_15242589_15242601	0.0566764	SOX2.p2	NM_001012428|ASB11|140456|ankyrin repeat and SOCS box containing 11	BX537853|ASB11|140456|ankyrin repeat and SOCS box containing 11
hg18_v1_chr19_+_7566698_7566944	0.0565705	SOX2.p2	BC035808|KIAA1543|57662|KIAA1543	NM_001080429|KIAA1543|57662|KIAA1543	NM_020902|KIAA1543|57662|KIAA1543	BC020431|KIAA1543|57662|KIAA1543
hg18_v1_chr22_+_37823174_37823258	0.0565572	SOX2.p2	NM_001166002|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H	NM_001166003|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H	NM_001166004|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H	NM_181773|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H	BC069023|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H	CR456481|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H
hg18_v1_chr2_+_10009242_10009361	0.0565395	SOX2.p2	NM_198182|GRHL1|29841|grainyhead-like 1 (Drosophila)	AK293855|GRHL1|29841|grainyhead-like 1 (Drosophila)	AK296982|GRHL1|29841|grainyhead-like 1 (Drosophila)	AK312950|GRHL1|29841|grainyhead-like 1 (Drosophila)	BC063299|GRHL1|29841|grainyhead-like 1 (Drosophila)	BC098456|GRHL1|29841|grainyhead-like 1 (Drosophila)	AF198489|GRHL1|29841|grainyhead-like 1 (Drosophila)	BC067519|GRHL1|29841|grainyhead-like 1 (Drosophila)	BC067520|GRHL1|29841|grainyhead-like 1 (Drosophila)	BC067521|GRHL1|29841|grainyhead-like 1 (Drosophila)
hg18_v1_chr1_+_13615388_13615388	0.0565049	SOX2.p2	NM_001100114|PRAMEF21|391001|PRAME family member 21
hg18_v1_chr7_-_148212310_148212311	0.0562009	SOX2.p2	AK293239|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	AK303585|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)
hg18_v1_chr9_-_19023183_19023255	0.0561919	SOX2.p2	BC033489|FAM154A|158297|family with sequence similarity 154, member A	AK292245|FAM154A|158297|family with sequence similarity 154, member A	AK057474|FAM154A|158297|family with sequence similarity 154, member A	NM_153707|FAM154A|158297|family with sequence similarity 154, member A
hg18_v1_chr4_+_146250978_146251023	0.0561628	SOX2.p2	X74987|ABCE1|6059|ATP-binding cassette, sub-family E (OABP), member 1
hg18_v1_chr5_+_156628929_156628939	0.0561429	SOX2.p2	BC011762|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	BC021008|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	NM_014376|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2
hg18_v1_chr22_+_37382574_37382615	0.0560581	SOX2.p2	AK307265|CBY1|25776|chibby homolog 1 (Drosophila)	AK311928|CBY1|25776|chibby homolog 1 (Drosophila)	CR602591|CBY1|25776|chibby homolog 1 (Drosophila)	NM_001002880|CBY1|25776|chibby homolog 1 (Drosophila)	NM_015373|CBY1|25776|chibby homolog 1 (Drosophila)
hg18_v1_chr2_+_167468220_167468220	0.0560454	SOX2.p2	NM_001079810|XIRP2|129446|xin actin-binding repeat containing 2	NM_152381|XIRP2|129446|xin actin-binding repeat containing 2
hg18_v1_chr19_-_49131250_49131299	0.0559971	SOX2.p2	AK127739|ZNF45|7596|zinc finger protein 45	NM_003425|ZNF45|7596|zinc finger protein 45
hg18_v1_chr6_+_27400518_27400556	0.0559779	SOX2.p2	AF352327|FKSG83|83954|FKSG83	AF336874|FKSG83|83954|FKSG83	BC107050|FKSG83|83954|FKSG83	NM_032030|FKSG83|83954|FKSG83
hg18_v1_chr18_+_41558089_41558115	0.0559712	SOX2.p2	NM_001128588|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)	NM_001146036|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)	NM_015865|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)
hg18_v1_chrX_-_138114817_138114833	0.0559409	SOX2.p2	AF199613|FGF13|2258|fibroblast growth factor 13
hg18_v1_chr3_+_156280338_156280398	0.0558608	SOX2.p2	NM_007287|MME|4311|membrane metallo-endopeptidase
hg18_v1_chr8_-_30635112_30635132	0.0558437	SOX2.p2	CR611388|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa
hg18_v1_chr6_-_88911708_88911802	0.0557081	SOX2.p2	BC095513|CNR1|1268|cannabinoid receptor 1 (brain)	AY766182|CNR1|1268|cannabinoid receptor 1 (brain)	AY995204|CNR1|1268|cannabinoid receptor 1 (brain)	BC100968|CNR1|1268|cannabinoid receptor 1 (brain)	BC100969|CNR1|1268|cannabinoid receptor 1 (brain)	BC100970|CNR1|1268|cannabinoid receptor 1 (brain)	BC100971|CNR1|1268|cannabinoid receptor 1 (brain)	DQ067455|CNR1|1268|cannabinoid receptor 1 (brain)	X81121|CNR1|1268|cannabinoid receptor 1 (brain)	AF107262|CNR1|1268|cannabinoid receptor 1 (brain)	BC074811|CNR1|1268|cannabinoid receptor 1 (brain)	BC074812|CNR1|1268|cannabinoid receptor 1 (brain)	NM_033181|CNR1|1268|cannabinoid receptor 1 (brain)	X81120|CNR1|1268|cannabinoid receptor 1 (brain)
hg18_v1_chr18_+_41448763_41448763	0.0556704	SOX2.p2	AF349446|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2	NM_007163|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2
hg18_v1_chr5_+_176492629_176492643	0.0556043	SOX2.p2	AK126591|NSD1|64324|nuclear receptor binding SET domain protein 1
hg18_v1_chr1_+_149299490_149299497	0.055597	SOX2.p2	BC009624|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11
hg18_v1_chr7_-_64088848_64088848	0.0555827	SOX2.p2	M55422|ZNF117|51351|zinc finger protein 117	NM_015852|ZNF117|51351|zinc finger protein 117
hg18_v1_chrX_+_152565849_152566020	0.0555254	SOX2.p2	BC060837|DUSP9|1852|dual specificity phosphatase 9
hg18_v1_chr3_+_47819402_47819629	0.0555071	SOX2.p2	BC047335|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	NM_014966|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	NM_138615|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	BC028405|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	AK291266|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30
hg18_v1_chr3_-_87408301_87408426	0.0554755	SOX2.p2	L18781|POU1F1|5449|POU class 1 homeobox 1	X72215|POU1F1|5449|POU class 1 homeobox 1	X62429|POU1F1|5449|POU class 1 homeobox 1	D10216|POU1F1|5449|POU class 1 homeobox 1	NM_000306|POU1F1|5449|POU class 1 homeobox 1	NM_001122757|POU1F1|5449|POU class 1 homeobox 1
hg18_v1_chr10_+_97505398_97505662	0.0554442	SOX2.p2	NM_001164178|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001164181|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	AK301459|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	AK298648|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	AK098278|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001164179|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001164182|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001164183|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001776|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1
hg18_v1_chr1_+_224317044_224317055	0.0553624	SOX2.p2	AK291102|LOC440926|440926|H3 histone, family 3A pseudogene	AK293541|H3F3A|3020|H3 histone, family 3A	BC029405|H3F3A|3020|H3 histone, family 3A	BC067757|LOC440926|440926|H3 histone, family 3A pseudogene	BC095447|H3F3A|3020|H3 histone, family 3A	M11354|H3F3A|3020|H3 histone, family 3A	CR616566|LOC440926|440926|H3 histone, family 3A pseudogene	BC066901|LOC440926|440926|H3 histone, family 3A pseudogene	CR592641|H3F3A|3020|H3 histone, family 3A	CR618614|LOC440926|440926|H3 histone, family 3A pseudogene	CR620119|LOC440926|440926|H3 histone, family 3A pseudogene
hg18_v1_chr12_+_27288446_27288462	0.0552485	SOX2.p2	AK291055|STK38L|23012|serine/threonine kinase 38 like
hg18_v1_chrX_-_49008115_49008231	0.0551412	SOX2.p2	AK292052|FOXP3|50943|forkhead box P3	AK299988|FOXP3|50943|forkhead box P3	AF277993|FOXP3|50943|forkhead box P3	NM_001114377|FOXP3|50943|forkhead box P3	NM_014009|FOXP3|50943|forkhead box P3
hg18_v1_chr6_-_105957458_105957620	0.055106	SOX2.p2	AB020018|PREP|5550|prolyl endopeptidase	AY660966|PREP|5550|prolyl endopeptidase	D21102|PREP|5550|prolyl endopeptidase	X74496|PREP|5550|prolyl endopeptidase	AB028867|PREP|5550|prolyl endopeptidase	DQ893427|PREP|5550|prolyl endopeptidase	DQ896742|PREP|5550|prolyl endopeptidase
hg18_v1_chr1_-_33585848_33585919	0.0550682	SOX2.p2	
hg18_v1_chr11_+_77209807_77209896	0.0550668	SOX2.p2	AF092136|C11orf67|28971|chromosome 11 open reading frame 67	AK024688|C11orf67|28971|chromosome 11 open reading frame 67	BC002752|C11orf67|28971|chromosome 11 open reading frame 67	NM_024684|C11orf67|28971|chromosome 11 open reading frame 67
hg18_v1_chr5_+_65408500_65408622	0.0549319	SOX2.p2	AK074288|ERBB2IP|55914|erbb2 interacting protein
hg18_v1_chr4_-_24195276_24195298	0.0548811	SOX2.p2	NM_001358|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15
hg18_v1_chr19_+_16105837_16105837	0.0548294	SOX2.p2	AY319652|HSH2D|84941|hematopoietic SH2 domain containing	NM_032855|HSH2D|84941|hematopoietic SH2 domain containing
hg18_v1_chr15_-_41698251_41698289	0.054712	SOX2.p2	AK308370|STRC|161497|stereocilin	BC129931|STRC|161497|stereocilin	BC129932|STRC|161497|stereocilin	NM_153700|STRC|161497|stereocilin
hg18_v1_chr15_-_68177244_68177258	0.0546944	SOX2.p2	CR603419|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)
hg18_v1_chr2_-_130646415_130646527	0.0545793	SOX2.p2	BC040941|SMPD4|55627|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)
hg18_v1_chr5_+_36912656_36912999	0.0544252	SOX2.p2	BC146821|NIPBL|25836|Nipped-B homolog (Drosophila)	BX640644|NIPBL|25836|Nipped-B homolog (Drosophila)	BC131490|NIPBL|25836|Nipped-B homolog (Drosophila)	AK290347|NIPBL|25836|Nipped-B homolog (Drosophila)	BX538178|NIPBL|25836|Nipped-B homolog (Drosophila)	BX538177|NIPBL|25836|Nipped-B homolog (Drosophila)
hg18_v1_chr19_+_46286207_46286216	0.0543987	SOX2.p2	NM_000766|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13	AF209774|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13	AY513604|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13	AY513605|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13	AY513606|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13	AY513607|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13	AY513608|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13	AY513609|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13
hg18_v1_chr1_-_158161877_158161896	0.0543886	SOX2.p2	BC009357|TAGLN2|8407|transgelin 2	CR607405|TAGLN2|8407|transgelin 2	CR609407|TAGLN2|8407|transgelin 2	CR612553|TAGLN2|8407|transgelin 2	CR624984|TAGLN2|8407|transgelin 2	CR592851|TAGLN2|8407|transgelin 2	CR622397|TAGLN2|8407|transgelin 2	CR626596|TAGLN2|8407|transgelin 2
hg18_v1_chr15_-_29070909_29071210	0.0543195	SOX2.p2	AK000320|MTMR10|54893|myotubularin related protein 10	AM392869|MTMR10|54893|myotubularin related protein 10	BC094750|MTMR10|54893|myotubularin related protein 10	CR607167|MTMR10|54893|myotubularin related protein 10	BC063296|MTMR10|54893|myotubularin related protein 10	NM_017762|MTMR10|54893|myotubularin related protein 10
hg18_v1_chr10_+_11247419_11247444	0.0542718	SOX2.p2	AK304216|CELF2|10659|CUGBP, Elav-like family member 2
hg18_v1_chr11_+_46256161_46256238	0.054225	SOX2.p2	DQ895809|CREB3L1|90993|cAMP responsive element binding protein 3-like 1	EU176365|CREB3L1|90993|cAMP responsive element binding protein 3-like 1
hg18_v1_chr5_+_92944680_92944798	0.0541225	SOX2.p2	BC017493|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1	NM_005654|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1
hg18_v1_chr19_-_7604569_7604633	0.0540896	SOX2.p2	BC038715|PCP2|126006|Purkinje cell protein 2	NM_174895|PCP2|126006|Purkinje cell protein 2	AK130855|PCP2|126006|Purkinje cell protein 2	BC025387|PCP2|126006|Purkinje cell protein 2
hg18_v1_chr22_-_29197944_29198033	0.0540223	SOX2.p2	AY158086|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)	BC069641|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)	BC101001|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)	BC101002|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)	BC101003|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)	BC101004|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)	AK298079|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)	AK131358|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)	AY240872|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)	NM_174975|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)
hg18_v1_chr8_+_11697616_11697678	0.0540136	SOX2.p2	CR614222|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR618448|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR590560|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	AK296043|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	AK315993|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	AK311246|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	X69141|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	AK301617|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR617638|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR595860|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR601044|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR603264|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR604624|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR617288|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR621292|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR602204|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1
hg18_v1_chr1_-_166372244_166372247	0.0539933	SOX2.p2	AK056040|GPR161|23432|G protein-coupled receptor 161	BC028163|GPR161|23432|G protein-coupled receptor 161	NM_153832|GPR161|23432|G protein-coupled receptor 161
hg18_v1_chr3_+_194793691_194793832	0.0539677	SOX2.p2	BC043443|OPA1|4976|optic atrophy 1 (autosomal dominant)	BC075805|OPA1|4976|optic atrophy 1 (autosomal dominant)	AB011139|OPA1|4976|optic atrophy 1 (autosomal dominant)
hg18_v1_chr14_+_68727968_68728043	0.0537768	SOX2.p2	CR936729|EXD2|55218|exonuclease 3'-5' domain containing 2	BX647767|EXD2|55218|exonuclease 3'-5' domain containing 2	CR936728|EXD2|55218|exonuclease 3'-5' domain containing 2	AK056025|EXD2|55218|exonuclease 3'-5' domain containing 2	AL834434|EXD2|55218|exonuclease 3'-5' domain containing 2
hg18_v1_chr12_-_30740011_30740064	0.0536799	SOX2.p2	U77494|IPO8|10526|importin 8
hg18_v1_chr4_-_184817098_184817374	0.0535647	SOX2.p2	BC107432|RWDD4|201965|RWD domain containing 4	CR615824|RWDD4|201965|RWD domain containing 4	AK021702|RWDD4|201965|RWD domain containing 4	AK293274|RWDD4|201965|RWD domain containing 4	AK315515|RWDD4|201965|RWD domain containing 4	BC017472|RWDD4|201965|RWD domain containing 4	CR606158|RWDD4|201965|RWD domain containing 4	CR606628|RWDD4|201965|RWD domain containing 4	CR610616|RWDD4|201965|RWD domain containing 4	CR626168|RWDD4|201965|RWD domain containing 4	BC067752|RWDD4|201965|RWD domain containing 4	NM_152682|RWDD4|201965|RWD domain containing 4
hg18_v1_chr6_-_50097606_50097652	0.0534824	SOX2.p2	DQ012014|DEFB110|245913|defensin, beta 110 locus	DQ012015|DEFB110|245913|defensin, beta 110 locus	NM_001037497|DEFB110|245913|defensin, beta 110 locus	NM_001037728|DEFB110|245913|defensin, beta 110 locus
hg18_v1_chr21_-_39642935_39642949	0.0533319	SOX2.p2	CR625629|HMGN1|3150|high-mobility group nucleosome binding domain 1
hg18_v1_chr4_+_120167770_120167775	0.05333	SOX2.p2	AJ010482|SYNPO2|171024|synaptopodin 2
hg18_v1_chr1_+_28935719_28936022	0.0532387	SOX2.p2	NM_001173128|YTHDF2|51441|YTH domain family, member 2	NM_016258|YTHDF2|51441|YTH domain family, member 2	BC002559|YTHDF2|51441|YTH domain family, member 2	AK292581|YTHDF2|51441|YTH domain family, member 2
hg18_v1_chr12_+_48765209_48765299	0.0529902	SOX2.p2	NM_003076|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	NM_139071|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	U66617|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	BC009368|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
hg18_v1_chr6_-_35764588_35764608	0.0529132	SOX2.p2	HM245391|FKBP5|2289|FK506 binding protein 5	AB209893|FKBP5|2289|FK506 binding protein 5
hg18_v1_chr12_+_50633430_50633430	0.0528983	SOX2.p2	AK299496|ACVR1B|91|activin A receptor, type IB	NM_020327|ACVR1B|91|activin A receptor, type IB
hg18_v1_chr7_-_104949787_104950008	0.0528928	SOX2.p2	BC011396|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)	AK091283|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)	NM_019042|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)	AK128629|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)
hg18_v1_chr5_-_180099663_180099704	0.0528515	SOX2.p2	NM_001001657|OR2Y1|134083|olfactory receptor, family 2, subfamily Y, member 1	BC140756|OR2Y1|134083|olfactory receptor, family 2, subfamily Y, member 1
hg18_v1_chr4_+_47181987_47182188	0.0527989	SOX2.p2	BC057839|ATP10D|57205|ATPase, class V, type 10D	AJ441078|ATP10D|57205|ATPase, class V, type 10D	NM_020453|ATP10D|57205|ATPase, class V, type 10D	BC131535|ATP10D|57205|ATPase, class V, type 10D
hg18_v1_chr7_+_94130673_94130691	0.0527967	SOX2.p2	AB049834|PEG10|23089|paternally expressed 10
hg18_v1_chr5_+_138705469_138705516	0.0527513	SOX2.p2	CR593605|PAIP2|51247|poly(A) binding protein interacting protein 2	AF317675|PAIP2|51247|poly(A) binding protein interacting protein 2
hg18_v1_chr9_-_124280025_124280055	0.0527414	SOX2.p2	NM_001004451|OR1J1|347168|olfactory receptor, family 1, subfamily J, member 1	BC136933|OR1J1|347168|olfactory receptor, family 1, subfamily J, member 1	BC136938|OR1J1|347168|olfactory receptor, family 1, subfamily J, member 1
hg18_v1_chr13_-_45654292_45654295	0.0527117	SOX2.p2	J02923|LCP1|3936|lymphocyte cytosolic protein 1 (L-plastin)
hg18_v1_chr11_-_125730655_125730691	0.0526451	SOX2.p2	AK096370|FLJ39051|399972|hypothetical LOC399972
hg18_v1_chr10_-_5050191_5050206	0.0526262	SOX2.p2	BC063574|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	AK091194|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	NM_001354|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	NM_205845|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)
hg18_v1_chr6_+_28237529_28237548	0.0526	SOX2.p2	CR611340|ZNF389|651302|zinc finger protein 389	NM_001145129|ZNF389|651302|zinc finger protein 389
hg18_v1_chr1_+_170768914_170769094	0.0524709	SOX2.p2	NM_016227|C1orf9|51430|chromosome 1 open reading frame 9	AK302509|C1orf9|51430|chromosome 1 open reading frame 9	AL035291|C1orf9|51430|chromosome 1 open reading frame 9	BC137125|C1orf9|51430|chromosome 1 open reading frame 9	BC144487|C1orf9|51430|chromosome 1 open reading frame 9
hg18_v1_chr5_-_178984192_178984275	0.0524221	SOX2.p2	AK124530|HNRNPH1|3187|heterogeneous nuclear ribonucleoprotein H1 (H)
hg18_v1_chr2_-_26395420_26395473	0.0524018	SOX2.p2	AY140955|GPR113|165082|G protein-coupled receptor 113	NM_001145168|GPR113|165082|G protein-coupled receptor 113	AK293887|GPR113|165082|G protein-coupled receptor 113	NM_001145169|GPR113|165082|G protein-coupled receptor 113
hg18_v1_chr10_-_69422391_69422437	0.0523809	SOX2.p2	AK027835|HERC4|26091|hect domain and RLD 4
hg18_v1_chr1_-_172228673_172228832	0.052329	SOX2.p2	AB095945|RC3H1|149041|ring finger and CCCH-type domains 1	BC136784|RC3H1|149041|ring finger and CCCH-type domains 1	BC144408|RC3H1|149041|ring finger and CCCH-type domains 1	AK122948|RC3H1|149041|ring finger and CCCH-type domains 1	NM_172071|RC3H1|149041|ring finger and CCCH-type domains 1
hg18_v1_chr2_+_208284610_208284670	0.0522413	SOX2.p2	BC047293|CCNYL1|151195|cyclin Y-like 1
hg18_v1_chrX_+_56606686_56606866	0.052219	SOX2.p2	NM_013444|UBQLN2|29978|ubiquilin 2	BC069237|UBQLN2|29978|ubiquilin 2	AK297252|UBQLN2|29978|ubiquilin 2	AK302885|UBQLN2|29978|ubiquilin 2	AF189009|UBQLN2|29978|ubiquilin 2
hg18_v1_chr16_+_74868676_74868806	0.0522114	SOX2.p2	AB051550|CNTNAP4|85445|contactin associated protein-like 4	NM_033401|CNTNAP4|85445|contactin associated protein-like 4
hg18_v1_chr7_+_116289833_116289911	0.0521918	SOX2.p2	BC005338|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	CR607571|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	CR614626|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	AK293405|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	AK294409|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	AK315915|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	CR613439|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	CR590988|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	AK222989|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	AK223004|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	U03269|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	BC015963|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	CR596187|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	CR602265|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	BT006735|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	U03851|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	CR601522|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	CR603366|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2
hg18_v1_chr14_-_104332895_104332940	0.0521599	SOX2.p2	BC063408|AKT1|207|v-akt murine thymoma viral oncogene homolog 1
hg18_v1_chr12_-_51332214_51332225	0.0520604	SOX2.p2	BC096294|KRT2|3849|keratin 2	BC099643|KRT2|3849|keratin 2	BC099644|KRT2|3849|keratin 2	M99061|KRT2|3849|keratin 2	NM_000423|KRT2|3849|keratin 2
hg18_v1_chr9_-_36365965_36366036	0.0520224	SOX2.p2	AK024996|RNF38|152006|ring finger protein 38	DQ895235|RNF38|152006|ring finger protein 38	EU176239|RNF38|152006|ring finger protein 38
hg18_v1_chr10_+_44775155_44775321	0.0519811	SOX2.p2	AY216713|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4	AY216714|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4	AY216715|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4	AY216716|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4	NM_032023|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4	BC032593|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4	AF260335|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4	AK311531|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4
hg18_v1_chr21_-_46529663_46529703	0.0519586	SOX2.p2	AJ010089|MCM3AP|8888|minichromosome maintenance complex component 3 associated protein	NM_003906|MCM3AP|8888|minichromosome maintenance complex component 3 associated protein	BC104958|MCM3AP|8888|minichromosome maintenance complex component 3 associated protein	BC104960|MCM3AP|8888|minichromosome maintenance complex component 3 associated protein
hg18_v1_chr7_+_26158257_26158660	0.0519335	SOX2.p2	NM_004289|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3	BC068455|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3	AF133059|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3	AF134891|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3
hg18_v1_chrX_+_77052834_77052864	0.0519303	SOX2.p2	NM_000052|ATP7A|538|ATPase, Cu++ transporting, alpha polypeptide	L06133|ATP7A|538|ATPase, Cu++ transporting, alpha polypeptide
hg18_v1_chr3_+_194793615_194793683	0.0517759	SOX2.p2	NM_015560|OPA1|4976|optic atrophy 1 (autosomal dominant)	NM_130831|OPA1|4976|optic atrophy 1 (autosomal dominant)	NM_130832|OPA1|4976|optic atrophy 1 (autosomal dominant)	NM_130833|OPA1|4976|optic atrophy 1 (autosomal dominant)	NM_130834|OPA1|4976|optic atrophy 1 (autosomal dominant)	NM_130835|OPA1|4976|optic atrophy 1 (autosomal dominant)	NM_130836|OPA1|4976|optic atrophy 1 (autosomal dominant)	NM_130837|OPA1|4976|optic atrophy 1 (autosomal dominant)
hg18_v1_chr3_+_157875063_157875129	0.0517504	SOX2.p2	AK291261|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase	BX537965|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase	BC050350|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase
hg18_v1_chr18_-_76106221_76106479	0.0516644	SOX2.p2	AB044556|PARD6G|84552|par-6 partitioning defective 6 homolog gamma (C. elegans)	AB178535|PARD6G|84552|par-6 partitioning defective 6 homolog gamma (C. elegans)	AB178536|PARD6G|84552|par-6 partitioning defective 6 homolog gamma (C. elegans)	BC060797|PARD6G|84552|par-6 partitioning defective 6 homolog gamma (C. elegans)	NM_032510|PARD6G|84552|par-6 partitioning defective 6 homolog gamma (C. elegans)
hg18_v1_chr8_-_74821610_74821633	0.051625	SOX2.p2	Y19062|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	AB210014|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	AL079285|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	AK002152|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	AK126149|LOC729696|729696|hypothetical protein LOC729696	AK293496|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	AK303104|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	AK314617|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	BC008369|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	BC008370|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)
hg18_v1_chr6_+_17708483_17708674	0.0515466	SOX2.p2	NM_016255|FAM8A1|51439|family with sequence similarity 8, member A1	AK296393|FAM8A1|51439|family with sequence similarity 8, member A1	AK312814|FAM8A1|51439|family with sequence similarity 8, member A1	AF097027|FAM8A1|51439|family with sequence similarity 8, member A1	BC047881|FAM8A1|51439|family with sequence similarity 8, member A1
hg18_v1_chr1_+_149299504_149299524	0.0515177	SOX2.p2	AK057755|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	BC007079|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	BC008445|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	CR602062|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	CR603022|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	CR604725|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	CR608615|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	CR593527|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11
hg18_v1_chr6_-_31882704_31882744	0.0515138	SOX2.p2	AF196468|LSM2|57819|LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)	CR601536|LSM2|57819|LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)	BC009192|LSM2|57819|LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)	NM_021177|LSM2|57819|LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AF136977|LSM2|57819|LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AJ245416|LSM2|57819|LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)
hg18_v1_chr22_+_42908102_42908189	0.0512586	SOX2.p2	NM_022141|PARVG|64098|parvin, gamma	AK225929|PARVG|64098|parvin, gamma	AK307294|PARVG|64098|parvin, gamma	BC034406|PARVG|64098|parvin, gamma	AF237772|PARVG|64098|parvin, gamma
hg18_v1_chrX_+_70232362_70233103	0.0512275	SOX2.p2	CR596165|FOXO4|4303|forkhead box O4	NM_001170931|FOXO4|4303|forkhead box O4	NM_005938|FOXO4|4303|forkhead box O4	X93996|FOXO4|4303|forkhead box O4	BC106761|FOXO4|4303|forkhead box O4	AF384029|FOXO4|4303|forkhead box O4
hg18_v1_chr16_+_66476281_66476282	0.051224	SOX2.p2	AY358782|NRN1L|123904|neuritin 1-like	NM_198443|NRN1L|123904|neuritin 1-like	BC100863|NRN1L|123904|neuritin 1-like	BC100864|NRN1L|123904|neuritin 1-like	BC100865|NRN1L|123904|neuritin 1-like	BC100866|NRN1L|123904|neuritin 1-like
hg18_v1_chr19_+_3523950_3523957	0.0511329	SOX2.p2	BC002552|HMG20B|10362|high-mobility group 20B	AK289500|HMG20B|10362|high-mobility group 20B	BC003505|HMG20B|10362|high-mobility group 20B
hg18_v1_chr15_+_63701322_63701322	0.0511184	SOX2.p2	AF062922|SLC24A1|9187|solute carrier family 24 (sodium/potassium/calcium exchanger), member 1	NM_004727|SLC24A1|9187|solute carrier family 24 (sodium/potassium/calcium exchanger), member 1
hg18_v1_chr16_+_2503994_2504000	0.0510256	SOX2.p2	CR597229|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	BC007759|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c
hg18_v1_chr12_+_22669275_22669345	0.0509325	SOX2.p2	AF207600|ETNK1|55500|ethanolamine kinase 1	BC066907|ETNK1|55500|ethanolamine kinase 1	NM_001039481|ETNK1|55500|ethanolamine kinase 1	NM_018638|ETNK1|55500|ethanolamine kinase 1
hg18_v1_chrX_+_153318452_153318533	0.0509243	SOX2.p2	NM_001493|GDI1|2664|GDP dissociation inhibitor 1
hg18_v1_chr22_+_42138034_42138088	0.0508295	SOX2.p2	AK289774|MPPED1|758|metallophosphoesterase domain containing 1
hg18_v1_chr10_+_91488704_91488791	0.050469	SOX2.p2	AK025628|KIF20B|9585|kinesin family member 20B
hg18_v1_chr1_-_115102138_115102193	0.0503974	SOX2.p2	NM_001007553|CSDE1|7812|cold shock domain containing E1, RNA-binding	NM_007158|CSDE1|7812|cold shock domain containing E1, RNA-binding	NM_001130523|CSDE1|7812|cold shock domain containing E1, RNA-binding
hg18_v1_chr11_+_125208420_125208420	0.0503696	SOX2.p2	AK123042|PATE4|399968|prostate and testis expressed 4	AK311509|PATE4|399968|prostate and testis expressed 4	NM_001144874|PATE4|399968|prostate and testis expressed 4
hg18_v1_chr7_+_26208532_26208632	0.0503098	SOX2.p2	
hg18_v1_chr4_-_165523856_165523856	0.0502751	SOX2.p2	AK289711|MARCH1|55016|membrane-associated ring finger (C3HC4) 1	NM_001166373|MARCH1|55016|membrane-associated ring finger (C3HC4) 1
hg18_v1_chr11_+_94440045_94440068	0.0502482	SOX2.p2	AF031166|SRSF8|10929|serine/arginine-rich splicing factor 8
hg18_v1_chr11_+_69165159_69165262	0.0502252	SOX2.p2	AM393193|CCND1|595|cyclin D1	AM393430|CCND1|595|cyclin D1	AM393593|CCND1|595|cyclin D1	DQ891848|CCND1|595|cyclin D1	DQ895038|CCND1|595|cyclin D1	BT019844|CCND1|595|cyclin D1	BT019845|CCND1|595|cyclin D1	CR536538|CCND1|595|cyclin D1	CR542099|CCND1|595|cyclin D1
hg18_v1_chr10_-_13430195_13430351	0.0502199	SOX2.p2	CR590975|SEPHS1|22929|selenophosphate synthetase 1	U34044|SEPHS1|22929|selenophosphate synthetase 1	BC063816|SEPHS1|22929|selenophosphate synthetase 1	CR610247|SEPHS1|22929|selenophosphate synthetase 1	GU954545|SEPHS1|22929|selenophosphate synthetase 1	GU954546|SEPHS1|22929|selenophosphate synthetase 1	GU954547|SEPHS1|22929|selenophosphate synthetase 1	GU954548|SEPHS1|22929|selenophosphate synthetase 1	GU954549|SEPHS1|22929|selenophosphate synthetase 1	CR598779|SEPHS1|22929|selenophosphate synthetase 1	NM_001195602|SEPHS1|22929|selenophosphate synthetase 1	NM_001195604|SEPHS1|22929|selenophosphate synthetase 1	NM_012247|SEPHS1|22929|selenophosphate synthetase 1
hg18_v1_chr1_-_240228987_240229007	0.0502026	SOX2.p2	BC132986|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma	BC132988|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma	AF276659|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma	BC127722|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma	NM_001004343|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma
hg18_v1_chr3_-_114047479_114047486	0.0499912	SOX2.p2	BC144504|CD200R1L|344807|CD200 receptor 1-like	BC144507|CD200R1L|344807|CD200 receptor 1-like	AY284976|CD200R1L|344807|CD200 receptor 1-like	AY552790|CD200R1L|344807|CD200 receptor 1-like	NM_001008784|CD200R1L|344807|CD200 receptor 1-like
hg18_v1_chr3_-_25681394_25681401	0.0499208	SOX2.p2	AK296510|TOP2B|7155|topoisomerase (DNA) II beta 180kDa	AK307450|TOP2B|7155|topoisomerase (DNA) II beta 180kDa
hg18_v1_chr1_+_119712918_119713016	0.0498491	SOX2.p2	AK298289|HAO2|51179|hydroxyacid oxidase 2 (long chain)	NM_001005783|HAO2|51179|hydroxyacid oxidase 2 (long chain)	NM_016527|HAO2|51179|hydroxyacid oxidase 2 (long chain)	BC020863|HAO2|51179|hydroxyacid oxidase 2 (long chain)	AF231917|HAO2|51179|hydroxyacid oxidase 2 (long chain)	AF203975|HAO2|51179|hydroxyacid oxidase 2 (long chain)	AY513277|HAO2|51179|hydroxyacid oxidase 2 (long chain)
hg18_v1_chr3_-_47798372_47798376	0.0498462	SOX2.p2	BC065253|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
hg18_v1_chr1_+_39319675_39319704	0.0496833	SOX2.p2	AK299010|MACF1|23499|microtubule-actin crosslinking factor 1	NM_012090|MACF1|23499|microtubule-actin crosslinking factor 1
hg18_v1_chrX_-_20069678_20069916	0.0496458	SOX2.p2	BT007064|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	EU831819|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	EU831896|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	CR620297|EIF1AXP1|280661|eukaryotic translation initiation factor 1A, X-linked pseudogene 1	BC000793|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	BC110421|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	AK312320|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	BC067851|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	L18960|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	NM_001412|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked
hg18_v1_chr9_-_36266930_36267052	0.049626	SOX2.p2	AM697709|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase	AM697708|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase	AK296687|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase	AK312539|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase	NM_001128227|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase	NM_001190388|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase
hg18_v1_chr5_+_139008209_139008493	0.0496051	SOX2.p2	AB097005|CXXC5|51523|CXXC finger protein 5	AB097032|CXXC5|51523|CXXC finger protein 5	NM_016463|CXXC5|51523|CXXC finger protein 5
hg18_v1_chr3_+_47819631_47819689	0.0494688	SOX2.p2	AK096791|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	BC020126|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	BC038417|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	BC015029|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	AB020697|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	BC063510|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30
hg18_v1_chrX_+_37735013_37735036	0.0494366	SOX2.p2	AF049615|CXorf27|25763|chromosome X open reading frame 27	NM_012274|CXorf27|25763|chromosome X open reading frame 27	BC104428|CXorf27|25763|chromosome X open reading frame 27	BC104429|CXorf27|25763|chromosome X open reading frame 27	BC113024|CXorf27|25763|chromosome X open reading frame 27	BC113025|CXorf27|25763|chromosome X open reading frame 27
hg18_v1_chr8_+_23157094_23157113	0.0493326	SOX2.p2	AK097202|CHMP7|91782|CHMP family, member 7	NM_152272|CHMP7|91782|CHMP family, member 7	BC042050|CHMP7|91782|CHMP family, member 7
hg18_v1_chr13_-_24643778_24643856	0.0493323	SOX2.p2	NM_152704|FAM123A|219287|family with sequence similarity 123A	NM_199138|FAM123A|219287|family with sequence similarity 123A
hg18_v1_chr4_+_120029426_120029639	0.0492853	SOX2.p2	AL833547|SYNPO2|171024|synaptopodin 2	NM_001128933|SYNPO2|171024|synaptopodin 2	NM_001128934|SYNPO2|171024|synaptopodin 2	NM_133477|SYNPO2|171024|synaptopodin 2	BC150629|SYNPO2|171024|synaptopodin 2	AK307711|SYNPO2|171024|synaptopodin 2	CR936673|SYNPO2|171024|synaptopodin 2	AK304121|SYNPO2|171024|synaptopodin 2	AL832031|SYNPO2|171024|synaptopodin 2	AL833294|SYNPO2|171024|synaptopodin 2	AL832363|SYNPO2|171024|synaptopodin 2	BC136256|SYNPO2|171024|synaptopodin 2	AM392848|SYNPO2|171024|synaptopodin 2	AM393854|SYNPO2|171024|synaptopodin 2	EU481975|SYNPO2|171024|synaptopodin 2
hg18_v1_chr1_+_86942810_86942868	0.0492809	SOX2.p2	NM_016009|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1
hg18_v1_chr6_-_32227695_32227701	0.0492275	SOX2.p2	AK054885|PRRT1|80863|proline-rich transmembrane protein 1	NM_030651|PRRT1|80863|proline-rich transmembrane protein 1
hg18_v1_chr2_-_56003859_56003859	0.049208	SOX2.p2	NM_004105|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1
hg18_v1_chr14_+_19473606_19473606	0.0491594	SOX2.p2	BC151145|OR4K1|79544|olfactory receptor, family 4, subfamily K, member 1	NM_001004063|OR4K1|79544|olfactory receptor, family 4, subfamily K, member 1
hg18_v1_chr3_+_192529567_192530154	0.0490524	SOX2.p2	AJ416916|CCDC50|152137|coiled-coil domain containing 50	AJ557013|CCDC50|152137|coiled-coil domain containing 50	NM_174908|CCDC50|152137|coiled-coil domain containing 50	NM_178335|CCDC50|152137|coiled-coil domain containing 50	CR610519|CCDC50|152137|coiled-coil domain containing 50	CR618316|CCDC50|152137|coiled-coil domain containing 50	CR614299|CCDC50|152137|coiled-coil domain containing 50	CR603155|CCDC50|152137|coiled-coil domain containing 50	CR592179|CCDC50|152137|coiled-coil domain containing 50	CR601015|CCDC50|152137|coiled-coil domain containing 50	CR618301|CCDC50|152137|coiled-coil domain containing 50	BC065004|CCDC50|152137|coiled-coil domain containing 50
hg18_v1_chr2_-_36929520_36929549	0.0490029	SOX2.p2	BC015406|STRN|6801|striatin, calmodulin binding protein
hg18_v1_chr4_-_185963859_185963935	0.0488997	SOX2.p2	AK296826|ACSL1|2180|acyl-CoA synthetase long-chain family member 1
hg18_v1_chr15_-_41449399_41449551	0.0488617	SOX2.p2	AF525399|ZSCAN29|146050|zinc finger and SCAN domain containing 29	BC109270|ZSCAN29|146050|zinc finger and SCAN domain containing 29	BC109271|ZSCAN29|146050|zinc finger and SCAN domain containing 29	AK122788|ZSCAN29|146050|zinc finger and SCAN domain containing 29	NM_152455|ZSCAN29|146050|zinc finger and SCAN domain containing 29	BC043612|ZSCAN29|146050|zinc finger and SCAN domain containing 29
hg18_v1_chr19_-_14800275_14800275	0.0488561	SOX2.p2	NM_017506|OR7A5|26659|olfactory receptor, family 7, subfamily A, member 5
hg18_v1_chr20_+_60151868_60152444	0.048663	SOX2.p2	AK125656|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	AK291485|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	AK299881|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	NM_198935|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	BC034494|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	BX640848|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	AK308765|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	BC068993|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	AB014593|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	DQ890908|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	EU176499|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1
hg18_v1_chr17_-_77093709_77093999	0.0486061	SOX2.p2	CR602100|ACTG1|71|actin, gamma 1	CR621646|ACTG1|71|actin, gamma 1	CR602869|ACTG1|71|actin, gamma 1	CR615492|ACTG1|71|actin, gamma 1	CR594886|ACTG1|71|actin, gamma 1	CR614104|ACTG1|71|actin, gamma 1	BC017450|ACTG1|71|actin, gamma 1	CR598949|ACTG1|71|actin, gamma 1	BC004223|ACTG1|71|actin, gamma 1	BC063495|ACTG1|71|actin, gamma 1	BT019856|ACTG1|71|actin, gamma 1	DQ891374|ACTG1|71|actin, gamma 1	EU176631|ACTG1|71|actin, gamma 1	EU832621|ACTG1|71|actin, gamma 1	EU832693|ACTG1|71|actin, gamma 1	CR619201|ACTG1|71|actin, gamma 1	CR612577|ACTG1|71|actin, gamma 1	CR626047|ACTG1|71|actin, gamma 1	CR600154|ACTG1|71|actin, gamma 1	CR605249|ACTG1|71|actin, gamma 1	CR623959|ACTG1|71|actin, gamma 1
hg18_v1_chrX_-_114158388_114158472	0.0485919	SOX2.p2	X95302|IL13RA2|3598|interleukin 13 receptor, alpha 2	AK308523|IL13RA2|3598|interleukin 13 receptor, alpha 2	GQ494004|IL13RA2|3598|interleukin 13 receptor, alpha 2	U70981|IL13RA2|3598|interleukin 13 receptor, alpha 2	AK291957|IL13RA2|3598|interleukin 13 receptor, alpha 2	CR594473|IL13RA2|3598|interleukin 13 receptor, alpha 2	CR623092|IL13RA2|3598|interleukin 13 receptor, alpha 2	NM_000640|IL13RA2|3598|interleukin 13 receptor, alpha 2	Y08768|IL13RA2|3598|interleukin 13 receptor, alpha 2	AK309444|IL13RA2|3598|interleukin 13 receptor, alpha 2
hg18_v1_chr6_-_79844503_79844573	0.0485511	SOX2.p2	DQ924532|PHIP|55023|pleckstrin homology domain interacting protein	AJ303102|PHIP|55023|pleckstrin homology domain interacting protein
hg18_v1_chr5_+_140703784_140703786	0.0485364	SOX2.p2	AF152323|PCDHGA3|56112|protocadherin gamma subfamily A, 3	AF152509|PCDHGA3|56112|protocadherin gamma subfamily A, 3	AF152510|PCDHGA3|56112|protocadherin gamma subfamily A, 3	BC115408|PCDHGA3|56112|protocadherin gamma subfamily A, 3	BC115409|PCDHGA3|56112|protocadherin gamma subfamily A, 3	NM_018916|PCDHGA3|56112|protocadherin gamma subfamily A, 3	NM_032011|PCDHGA3|56112|protocadherin gamma subfamily A, 3	BC133708|PCDHGA3|56112|protocadherin gamma subfamily A, 3
hg18_v1_chr3_-_25658829_25658855	0.0484506	SOX2.p2	AB208879|TOP2B|7155|topoisomerase (DNA) II beta 180kDa
hg18_v1_chr19_+_60077360_60077557	0.0484365	SOX2.p2	NM_002000|FCAR|2204|Fc fragment of IgA, receptor for	NM_133269|FCAR|2204|Fc fragment of IgA, receptor for	NM_133271|FCAR|2204|Fc fragment of IgA, receptor for	NM_133272|FCAR|2204|Fc fragment of IgA, receptor for	NM_133273|FCAR|2204|Fc fragment of IgA, receptor for	NM_133274|FCAR|2204|Fc fragment of IgA, receptor for	NM_133277|FCAR|2204|Fc fragment of IgA, receptor for	NM_133278|FCAR|2204|Fc fragment of IgA, receptor for	NM_133279|FCAR|2204|Fc fragment of IgA, receptor for	AK290922|FCAR|2204|Fc fragment of IgA, receptor for	BC027953|FCAR|2204|Fc fragment of IgA, receptor for	U56236|FCAR|2204|Fc fragment of IgA, receptor for	U56237|FCAR|2204|Fc fragment of IgA, receptor for	U43677|FCAR|2204|Fc fragment of IgA, receptor for	U43774|FCAR|2204|Fc fragment of IgA, receptor for	DQ890935|FCAR|2204|Fc fragment of IgA, receptor for	DQ894098|FCAR|2204|Fc fragment of IgA, receptor for	D87853|FCAR|2204|Fc fragment of IgA, receptor for	D87854|FCAR|2204|Fc fragment of IgA, receptor for	D87855|FCAR|2204|Fc fragment of IgA, receptor for	D87856|FCAR|2204|Fc fragment of IgA, receptor for	D87857|FCAR|2204|Fc fragment of IgA, receptor for	D87858|FCAR|2204|Fc fragment of IgA, receptor for	D87859|FCAR|2204|Fc fragment of IgA, receptor for	D87860|FCAR|2204|Fc fragment of IgA, receptor for	D87861|FCAR|2204|Fc fragment of IgA, receptor for	D87862|FCAR|2204|Fc fragment of IgA, receptor for	DQ075334|FCAR|2204|Fc fragment of IgA, receptor for	DQ075335|FCAR|2204|Fc fragment of IgA, receptor for	DQ075336|FCAR|2204|Fc fragment of IgA, receptor for	DQ075337|FCAR|2204|Fc fragment of IgA, receptor for	DQ075338|FCAR|2204|Fc fragment of IgA, receptor for	DQ075339|FCAR|2204|Fc fragment of IgA, receptor for	S82919|FCAR|2204|Fc fragment of IgA, receptor for	X92558|FCAR|2204|Fc fragment of IgA, receptor for	X92559|FCAR|2204|Fc fragment of IgA, receptor for	X92560|FCAR|2204|Fc fragment of IgA, receptor for	X92561|FCAR|2204|Fc fragment of IgA, receptor for	X92562|FCAR|2204|Fc fragment of IgA, receptor for
hg18_v1_chr3_-_47798347_47798362	0.0484039	SOX2.p2	BC113465|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	BC117213|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
hg18_v1_chr16_-_79668304_79668372	0.0483369	SOX2.p2	AK057264|C16orf46|123775|chromosome 16 open reading frame 46	AK295411|C16orf46|123775|chromosome 16 open reading frame 46	BC064143|C16orf46|123775|chromosome 16 open reading frame 46	NM_001100873|C16orf46|123775|chromosome 16 open reading frame 46	NM_152337|C16orf46|123775|chromosome 16 open reading frame 46
hg18_v1_chr1_+_99884018_99884485	0.048324	SOX2.p2	NM_017734|PALMD|54873|palmdelphin	AF262379|PALMD|54873|palmdelphin	AL390971|PALMD|54873|palmdelphin	AJ312214|PALMD|54873|palmdelphin	BC012570|PALMD|54873|palmdelphin	AK000278|PALMD|54873|palmdelphin	AL390973|PALMD|54873|palmdelphin	CR624809|PALMD|54873|palmdelphin	CR603507|PALMD|54873|palmdelphin	AL390972|PALMD|54873|palmdelphin
hg18_v1_chr6_-_32227645_32227677	0.048237	SOX2.p2	BC063046|PRRT1|80863|proline-rich transmembrane protein 1	AK123424|PRRT1|80863|proline-rich transmembrane protein 1
hg18_v1_chr11_-_2881750_2881750	0.0482286	SOX2.p2	NM_007105|SLC22A18AS|5003|solute carrier family 22 (organic cation transporter), member 18 antisense
hg18_v1_chr11_+_737449_737483	0.0482073	SOX2.p2	AK295537|TALDO1|6888|transaldolase 1	AK313427|TALDO1|6888|transaldolase 1	BC018847|TALDO1|6888|transaldolase 1
hg18_v1_chrX_+_47114925_47115010	0.0481997	SOX2.p2	U28687|ZNF157|7712|zinc finger protein 157	NM_003446|ZNF157|7712|zinc finger protein 157	BC075003|ZNF157|7712|zinc finger protein 157	EU446919|ZNF157|7712|zinc finger protein 157
hg18_v1_chr10_+_70609986_70610056	0.0481473	SOX2.p2	BC036112|SUPV3L1|6832|suppressor of var1, 3-like 1 (S. cerevisiae)	NM_003171|SUPV3L1|6832|suppressor of var1, 3-like 1 (S. cerevisiae)	AK290416|SUPV3L1|6832|suppressor of var1, 3-like 1 (S. cerevisiae)	AK299670|SUPV3L1|6832|suppressor of var1, 3-like 1 (S. cerevisiae)	AF042169|SUPV3L1|6832|suppressor of var1, 3-like 1 (S. cerevisiae)	DQ891004|SUPV3L1|6832|suppressor of var1, 3-like 1 (S. cerevisiae)	DQ894183|SUPV3L1|6832|suppressor of var1, 3-like 1 (S. cerevisiae)
hg18_v1_chr11_+_125586828_125586917	0.0481291	SOX2.p2	NM_024556|FAM118B|79607|family with sequence similarity 118, member B	CR625659|FAM118B|79607|family with sequence similarity 118, member B	AK315615|FAM118B|79607|family with sequence similarity 118, member B	CR617403|FAM118B|79607|family with sequence similarity 118, member B	CR599154|FAM118B|79607|family with sequence similarity 118, member B	CR623279|FAM118B|79607|family with sequence similarity 118, member B	AK024756|FAM118B|79607|family with sequence similarity 118, member B	AK225081|FAM118B|79607|family with sequence similarity 118, member B	BC001647|FAM118B|79607|family with sequence similarity 118, member B
hg18_v1_chr7_-_130004119_130004151	0.0479992	SOX2.p2	AK291409|COPG2|26958|coatomer protein complex, subunit gamma 2	NM_012133|COPG2|26958|coatomer protein complex, subunit gamma 2
hg18_v1_chrX_-_107569256_107569382	0.0479515	SOX2.p2	BT007228|COL4A6|1288|collagen, type IV, alpha 6	L22763|COL4A6|1288|collagen, type IV, alpha 6	U04845|COL4A6|1288|collagen, type IV, alpha 6	NM_001847|COL4A6|1288|collagen, type IV, alpha 6	BC005305|COL4A6|1288|collagen, type IV, alpha 6
hg18_v1_chr1_-_16411690_16411752	0.0478906	SOX2.p2	BC040640|ARHGEF19|128272|Rho guanine nucleotide exchange factor (GEF) 19	NM_153213|ARHGEF19|128272|Rho guanine nucleotide exchange factor (GEF) 19	AK091281|ARHGEF19|128272|Rho guanine nucleotide exchange factor (GEF) 19	AK297707|ARHGEF19|128272|Rho guanine nucleotide exchange factor (GEF) 19
hg18_v1_chr1_+_164063684_164063736	0.0477176	SOX2.p2	AF236637|UCK2|7371|uridine-cytidine kinase 2	AK294537|UCK2|7371|uridine-cytidine kinase 2	AB062451|UCK2|7371|uridine-cytidine kinase 2
hg18_v1_chr12_+_102982365_102982468	0.0476907	SOX2.p2	NM_013320|HCFC2|29915|host cell factor C2	AK313466|HCFC2|29915|host cell factor C2	AK223342|HCFC2|29915|host cell factor C2	BC006558|HCFC2|29915|host cell factor C2	AF117210|HCFC2|29915|host cell factor C2	BC033799|HCFC2|29915|host cell factor C2	EU446491|HCFC2|29915|host cell factor C2
hg18_v1_chr10_-_28631850_28632026	0.0476795	SOX2.p2	AK315046|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)	AK301592|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)
hg18_v1_chr15_-_41000100_41000345	0.0476728	SOX2.p2	CR615164|TTBK2|146057|tau tubulin kinase 2	AF525400|TTBK2|146057|tau tubulin kinase 2	CR611465|TTBK2|146057|tau tubulin kinase 2	AK131372|TTBK2|146057|tau tubulin kinase 2	BC041876|TTBK2|146057|tau tubulin kinase 2	NM_173500|TTBK2|146057|tau tubulin kinase 2	BC071556|TTBK2|146057|tau tubulin kinase 2
hg18_v1_chrX_-_154216929_154217179	0.0475864	SOX2.p2	AM393055|CLIC2|1193|chloride intracellular channel 2	AY191592|CLIC2|1193|chloride intracellular channel 2	DQ892014|CLIC2|1193|chloride intracellular channel 2	DQ895204|CLIC2|1193|chloride intracellular channel 2	BC022305|CLIC2|1193|chloride intracellular channel 2	BC005367|CLIC2|1193|chloride intracellular channel 2	AK292785|CLIC2|1193|chloride intracellular channel 2	Y12696|CLIC2|1193|chloride intracellular channel 2	NM_001289|CLIC2|1193|chloride intracellular channel 2
hg18_v1_chr12_+_27288344_27288438	0.047449	SOX2.p2	NM_015000|STK38L|23012|serine/threonine kinase 38 like	BC028603|STK38L|23012|serine/threonine kinase 38 like
hg18_v1_chr18_-_46978029_46978048	0.0473403	SOX2.p2	NM_016626|MEX3C|51320|mex-3 homolog C (C. elegans)
hg18_v1_chr14_+_19513442_19513517	0.04734	SOX2.p2	BC140726|OR4K15|81127|olfactory receptor, family 4, subfamily K, member 15	NM_001005486|OR4K15|81127|olfactory receptor, family 4, subfamily K, member 15
hg18_v1_chr5_+_169713458_169713458	0.0471413	SOX2.p2	DQ148476|KCNIP1|30820|Kv channel interacting protein 1	NM_001034838|KCNIP1|30820|Kv channel interacting protein 1
hg18_v1_chr17_+_70092651_70092651	0.0470575	SOX2.p2	AK056444|C17orf77|146723|chromosome 17 open reading frame 77	NM_152460|C17orf77|146723|chromosome 17 open reading frame 77
hg18_v1_chr4_+_123380569_123380579	0.0470486	SOX2.p2	CR936613|KIAA1109|84162|KIAA1109
hg18_v1_chr14_+_28311740_28311753	0.047012	SOX2.p2	BX248251|C14orf23|387978|chromosome 14 open reading frame 23
hg18_v1_chr11_+_111551417_111551688	0.0469805	SOX2.p2	NM_031938|BCO2|83875|beta-carotene oxygenase 2	AK315300|BCO2|83875|beta-carotene oxygenase 2	BC041656|BCO2|83875|beta-carotene oxygenase 2	BC047934|BCO2|83875|beta-carotene oxygenase 2	AK091783|BCO2|83875|beta-carotene oxygenase 2	AJ290393|BCO2|83875|beta-carotene oxygenase 2	AF276432|BCO2|83875|beta-carotene oxygenase 2
hg18_v1_chr16_+_4842077_4842216	0.0468362	SOX2.p2	NM_016936|UBN1|29855|ubinuclein 1	AF108461|UBN1|29855|ubinuclein 1
hg18_v1_chr3_-_14963980_14964102	0.0468243	SOX2.p2	
hg18_v1_chr3_-_47798390_47798412	0.0468009	SOX2.p2	BC012101|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	NM_003074|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
hg18_v1_chr20_-_42561725_42561851	0.0466034	SOX2.p2	
hg18_v1_chr17_-_44026042_44026157	0.0465628	SOX2.p2	BC117247|HOXB5|3215|homeobox B5	NM_002147|HOXB5|3215|homeobox B5	AK314964|HOXB5|3215|homeobox B5
hg18_v1_chr2_+_200879040_200879649	0.0465372	SOX2.p2	AL110124|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	AY450394|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	AK090867|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	NM_001100422|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	NM_001100424|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	AK002064|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	AK090703|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	AK314561|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	BC010848|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	BC018736|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	NM_001100423|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like
hg18_v1_chr1_-_12599934_12600406	0.0465215	SOX2.p2	DQ426869|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3	DQ893006|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3	DQ896252|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3	AF061741|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3	AK222593|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3	BC002730|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3	CR622920|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3	CR607120|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3	AK310202|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3	AY358093|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3	CR594468|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3	AK312961|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3	BX648476|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3	NM_004753|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3
hg18_v1_chr3_+_170974745_170974983	0.046429	SOX2.p2	AB079777|MYNN|55892|myoneurin	AB079778|MYNN|55892|myoneurin	NM_001185119|MYNN|55892|myoneurin	AB528460|MYNN|55892|myoneurin	DQ891596|MYNN|55892|myoneurin	DQ894790|MYNN|55892|myoneurin	AY515692|MYNN|55892|myoneurin	AY541761|MYNN|55892|myoneurin	AY515691|MYNN|55892|myoneurin
hg18_v1_chr10_-_81698840_81698840	0.0464265	SOX2.p2	BC022318|SFTPD|6441|surfactant protein D	NM_003019|SFTPD|6441|surfactant protein D
hg18_v1_chr1_+_84636802_84636811	0.0463453	SOX2.p2	AF274571|DNASE2B|58511|deoxyribonuclease II beta	NM_021233|DNASE2B|58511|deoxyribonuclease II beta	BC126136|DNASE2B|58511|deoxyribonuclease II beta	BC126138|DNASE2B|58511|deoxyribonuclease II beta
hg18_v1_chr15_-_62782427_62782469	0.0463176	SOX2.p2	AF242520|OAZ2|4947|ornithine decarboxylase antizyme 2	AF242521|OAZ2|4947|ornithine decarboxylase antizyme 2	CR590996|OAZ2|4947|ornithine decarboxylase antizyme 2	CR611250|OAZ2|4947|ornithine decarboxylase antizyme 2	AF057297|OAZ2|4947|ornithine decarboxylase antizyme 2	CR603676|OAZ2|4947|ornithine decarboxylase antizyme 2	BC063577|OAZ2|4947|ornithine decarboxylase antizyme 2	CR604161|OAZ2|4947|ornithine decarboxylase antizyme 2	BC073877|OAZ2|4947|ornithine decarboxylase antizyme 2	CR590699|OAZ2|4947|ornithine decarboxylase antizyme 2	CR594645|OAZ2|4947|ornithine decarboxylase antizyme 2	CR596383|OAZ2|4947|ornithine decarboxylase antizyme 2	CR593659|OAZ2|4947|ornithine decarboxylase antizyme 2	CR616925|OAZ2|4947|ornithine decarboxylase antizyme 2	BC035493|OAZ2|4947|ornithine decarboxylase antizyme 2	CR601685|OAZ2|4947|ornithine decarboxylase antizyme 2	CR606371|OAZ2|4947|ornithine decarboxylase antizyme 2	CR612625|OAZ2|4947|ornithine decarboxylase antizyme 2	BC092483|OAZ2|4947|ornithine decarboxylase antizyme 2
hg18_v1_chr2_+_12775336_12775398	0.0462455	SOX2.p2	AK313237|TRIB2|28951|tribbles homolog 2 (Drosophila)	BC002637|TRIB2|28951|tribbles homolog 2 (Drosophila)
hg18_v1_chr6_+_12622286_12622290	0.0462361	SOX2.p2	
hg18_v1_chr6_+_101436028_101436104	0.0462256	SOX2.p2	
hg18_v1_chrX_-_53465847_53465890	0.0462158	SOX2.p2	BX640922|SMC1A|8243|structural maintenance of chromosomes 1A
hg18_v1_chr17_-_37034288_37034407	0.0460714	SOX2.p2	DQ891101|KRT17|3872|keratin 17	DQ894283|KRT17|3872|keratin 17	CR621616|KRT17|3872|keratin 17	CR600963|KRT17|3872|keratin 17	CR615020|KRT17|3872|keratin 17	CR603789|KRT17|3872|keratin 17	BC072018|KRT17|3872|keratin 17	CR622158|KRT17|3872|keratin 17	CR598766|KRT17|3872|keratin 17	CR612161|KRT17|3872|keratin 17	BC072019|KRT17|3872|keratin 17	BC011901|KRT17|3872|keratin 17	X62571|KRT17|3872|keratin 17	CR608860|KRT17|3872|keratin 17	CR618671|KRT17|3872|keratin 17	CR621301|KRT17|3872|keratin 17	BC000159|KRT17|3872|keratin 17	BC056421|KRT17|3872|keratin 17	CR595280|KRT17|3872|keratin 17	CR599780|KRT17|3872|keratin 17	CR608685|KRT17|3872|keratin 17	CR598735|KRT17|3872|keratin 17	CR599390|KRT17|3872|keratin 17	AK304373|KRT17|3872|keratin 17	AK095342|KRT17|3872|keratin 17	NM_000422|KRT17|3872|keratin 17
hg18_v1_chrX_-_100490329_100490405	0.0460121	SOX2.p2	U66035|TIMM8A|1678|translocase of inner mitochondrial membrane 8 homolog A (yeast)	BC070284|TIMM8A|1678|translocase of inner mitochondrial membrane 8 homolog A (yeast)	AK312117|TIMM8A|1678|translocase of inner mitochondrial membrane 8 homolog A (yeast)	BC005236|TIMM8A|1678|translocase of inner mitochondrial membrane 8 homolog A (yeast)	BC006994|TIMM8A|1678|translocase of inner mitochondrial membrane 8 homolog A (yeast)	BC015093|TIMM8A|1678|translocase of inner mitochondrial membrane 8 homolog A (yeast)	NM_001145951|TIMM8A|1678|translocase of inner mitochondrial membrane 8 homolog A (yeast)
hg18_v1_chr10_-_98109048_98109081	0.0459614	SOX2.p2	AF367761|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein	NM_001040102|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein	NM_001040103|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein	NM_033207|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein
hg18_v1_chr1_+_22650934_22651092	0.0458769	SOX2.p2	AB007947|ZBTB40|9923|zinc finger and BTB domain containing 40	BC114607|ZBTB40|9923|zinc finger and BTB domain containing 40
hg18_v1_chr6_-_130072971_130073068	0.0457431	SOX2.p2	BC062417|ARHGAP18|93663|Rho GTPase activating protein 18	BC017223|ARHGAP18|93663|Rho GTPase activating protein 18	BC039611|ARHGAP18|93663|Rho GTPase activating protein 18	AL834511|ARHGAP18|93663|Rho GTPase activating protein 18	BC073143|ARHGAP18|93663|Rho GTPase activating protein 18	BC107416|ARHGAP18|93663|Rho GTPase activating protein 18	BC101708|ARHGAP18|93663|Rho GTPase activating protein 18	BC111940|ARHGAP18|93663|Rho GTPase activating protein 18	BC143531|ARHGAP18|93663|Rho GTPase activating protein 18	AK098594|ARHGAP18|93663|Rho GTPase activating protein 18	AY643712|ARHGAP18|93663|Rho GTPase activating protein 18	NM_033515|ARHGAP18|93663|Rho GTPase activating protein 18
hg18_v1_chr19_-_7896974_7897058	0.0457375	SOX2.p2	BC062702|CTXN1|404217|cortexin 1	AK098834|CTXN1|404217|cortexin 1	NM_206833|CTXN1|404217|cortexin 1
hg18_v1_chr11_+_125730773_125730817	0.0455849	SOX2.p2	CR598875|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4	CR616349|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4	CR602167|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4	CR614162|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4	CR595606|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4	CR595607|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4	CR624587|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4	CR614499|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4
hg18_v1_chr1_+_31659246_31659302	0.045544	SOX2.p2	AK093784|SERINC2|347735|serine incorporator 2	AK316357|SERINC2|347735|serine incorporator 2	NM_001199039|SERINC2|347735|serine incorporator 2	NM_018565|SERINC2|347735|serine incorporator 2	AK296118|SERINC2|347735|serine incorporator 2
hg18_v1_chr19_-_60382529_60382569	0.0454739	SOX2.p2	AK295337|SYT5|6861|synaptotagmin V
hg18_v1_chr11_+_66952462_66952607	0.045296	SOX2.p2	NM_003952|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	BC136564|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	BC000094|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	AK297527|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	AB019245|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	CR593942|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	CR602192|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	CR604258|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	CR605830|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	CR618047|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	CR622954|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	AB208827|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	CR599694|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	CR622329|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	CR593441|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	CR604667|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	BC006106|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	AF099739|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	AB016869|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	CR612509|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	CR597985|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	AF076931|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	CR613481|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2
hg18_v1_chr10_-_99084417_99084469	0.0452744	SOX2.p2	BC020165|FRAT2|23401|frequently rearranged in advanced T-cell lymphomas 2	AB045118|FRAT2|23401|frequently rearranged in advanced T-cell lymphomas 2	NM_012083|FRAT2|23401|frequently rearranged in advanced T-cell lymphomas 2
hg18_v1_chr17_+_24394281_24394369	0.0452276	SOX2.p2	AK022773|PIPOX|51268|pipecolic acid oxidase	BC027622|PIPOX|51268|pipecolic acid oxidase	AK027498|PIPOX|51268|pipecolic acid oxidase	AF134593|PIPOX|51268|pipecolic acid oxidase	AF136970|PIPOX|51268|pipecolic acid oxidase	DQ896538|PIPOX|51268|pipecolic acid oxidase	EU176447|PIPOX|51268|pipecolic acid oxidase	CR457155|PIPOX|51268|pipecolic acid oxidase
hg18_v1_chr7_-_91632525_91632525	0.045193	SOX2.p2	NM_001161528|LOC401387|401387|leucine-rich repeat and death domain-containing protein
hg18_v1_chr18_+_70317548_70317603	0.0451272	SOX2.p2	AK097155|CNDP2|55748|CNDP dipeptidase 2 (metallopeptidase M20 family)
hg18_v1_chr11_+_67871999_67872026	0.0450364	SOX2.p2	AF088027|LRP5|4041|low density lipoprotein receptor-related protein 5
hg18_v1_chr8_-_102029997_102030305	0.0448485	SOX2.p2	CR611466|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide	S79449|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide	DQ891706|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide	DQ894884|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide	CR625952|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide
hg18_v1_chr20_+_31541565_31541700	0.0447825	SOX2.p2	NM_001032999|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2	AF052211|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2
hg18_v1_chr3_+_9748427_9748433	0.0446899	SOX2.p2	BC068262|BRPF1|7862|bromodomain and PHD finger containing, 1	BC036374|BRPF1|7862|bromodomain and PHD finger containing, 1	NM_001003694|BRPF1|7862|bromodomain and PHD finger containing, 1	NM_004634|BRPF1|7862|bromodomain and PHD finger containing, 1
hg18_v1_chrX_+_142794838_142794838	0.0446543	SOX2.p2	NM_001012989|UBE2NL|389898|ubiquitin-conjugating enzyme E2N-like
hg18_v1_chr8_+_26296439_26296563	0.0446276	SOX2.p2	NM_004331|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AF452712|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AK300286|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AL132665|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	BC009603|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AF067396|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AF079221|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AF060922|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AK307195|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AK300727|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AF536326|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	CR624662|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AB004788|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	CR607895|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AK290213|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	CR624736|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	BC001559|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	BT019500|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	BT019501|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	CR456701|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	EU831983|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	EU832076|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like
hg18_v1_chr19_+_45948598_45948688	0.0446258	SOX2.p2	NM_004596|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	CR597793|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	CR606390|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	BC000405|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	CR597355|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	CR602490|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	CR607723|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	CR611065|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	CR620163|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	CR614230|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A
hg18_v1_chr15_-_68177280_68177282	0.0445856	SOX2.p2	BC015729|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	AK304459|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)
hg18_v1_chr9_-_97309507_97309535	0.044526	SOX2.p2	NM_001083606|PTCH1|5727|patched 1	U43148|PTCH1|5727|patched 1
hg18_v1_chr19_-_48835783_48835871	0.0444436	SOX2.p2	BC068457|CADM4|199731|cell adhesion molecule 4	AK313028|CADM4|199731|cell adhesion molecule 4	AF363368|CADM4|199731|cell adhesion molecule 4	BC113963|CADM4|199731|cell adhesion molecule 4	NM_145296|CADM4|199731|cell adhesion molecule 4
hg18_v1_chr6_+_80771040_80771102	0.0443705	SOX2.p2	NM_001166691|TTK|7272|TTK protein kinase	NM_003318|TTK|7272|TTK protein kinase	BC032858|TTK|7272|TTK protein kinase	BC000633|TTK|7272|TTK protein kinase	AK292460|TTK|7272|TTK protein kinase
hg18_v1_chr14_+_71065794_71065794	0.0443427	SOX2.p2	AF090989|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1	AF090990|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1	NM_015556|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1
hg18_v1_chr7_-_150411345_150411502	0.044328	SOX2.p2	NM_031434|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1	CR598305|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1	CR593449|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1	AY358481|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1	CR611070|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1	CR624473|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1
hg18_v1_chr12_-_51001407_51001448	0.0443234	SOX2.p2	BC126935|KRT83|3889|keratin 83	BC128063|KRT83|3889|keratin 83	BC069546|KRT83|3889|keratin 83	X99141|KRT83|3889|keratin 83	AK314904|KRT83|3889|keratin 83	NM_002282|KRT83|3889|keratin 83
hg18_v1_chr7_-_148788799_148788985	0.0442878	SOX2.p2	AB033111|ZNF777|27153|zinc finger protein 777	NM_015694|ZNF777|27153|zinc finger protein 777
hg18_v1_chr10_+_11087345_11087348	0.04422	SOX2.p2	AK299548|CELF2|10659|CUGBP, Elav-like family member 2
hg18_v1_chr22_+_37740232_37740312	0.0440796	SOX2.p2	CR456394|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C	AB208979|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C	CU012952|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C	CU013240|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C
hg18_v1_chr4_+_120167721_120167721	0.0438995	SOX2.p2	FN422000|SYNPO2|171024|synaptopodin 2
hg18_v1_chr1_+_205736095_205736308	0.043891	SOX2.p2	NM_000573|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)	NM_000651|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)	AK309342|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)	AK298486|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)	Y00816|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)	BC032550|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)	X14362|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)
hg18_v1_chr5_-_43349249_43349328	0.0438165	SOX2.p2	BC000297|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)	BC082234|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)	X66435|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)	AK095492|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)	AK315593|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)
hg18_v1_chr2_-_55131176_55131197	0.0436893	SOX2.p2	AB040462|RTN4|57142|reticulon 4	AB040463|RTN4|57142|reticulon 4	AY102277|RTN4|57142|reticulon 4	AY102278|RTN4|57142|reticulon 4	AY102279|RTN4|57142|reticulon 4	BC016165|RTN4|57142|reticulon 4	BC068991|RTN4|57142|reticulon 4	BC150182|RTN4|57142|reticulon 4	BC152555|RTN4|57142|reticulon 4
hg18_v1_chr6_-_35764655_35764713	0.0436556	SOX2.p2	BC111050|FKBP5|2289|FK506 binding protein 5	AK222807|FKBP5|2289|FK506 binding protein 5	AK302704|FKBP5|2289|FK506 binding protein 5	AK303356|FKBP5|2289|FK506 binding protein 5	AK312422|FKBP5|2289|FK506 binding protein 5	BX647390|FKBP5|2289|FK506 binding protein 5	NM_001145776|FKBP5|2289|FK506 binding protein 5	AF194172|FKBP5|2289|FK506 binding protein 5	U71321|FKBP5|2289|FK506 binding protein 5	NM_001145777|FKBP5|2289|FK506 binding protein 5	NM_004117|FKBP5|2289|FK506 binding protein 5
hg18_v1_chrX_-_10495476_10495642	0.0436209	SOX2.p2	AF041210|MID1|4281|midline 1 (Opitz/BBB syndrome)	AY539988|MID1|4281|midline 1 (Opitz/BBB syndrome)	AY539994|MID1|4281|midline 1 (Opitz/BBB syndrome)	AY540022|MID1|4281|midline 1 (Opitz/BBB syndrome)	AY540023|MID1|4281|midline 1 (Opitz/BBB syndrome)	EU446510|MID1|4281|midline 1 (Opitz/BBB syndrome)	NM_001193278|MID1|4281|midline 1 (Opitz/BBB syndrome)	NM_001193279|MID1|4281|midline 1 (Opitz/BBB syndrome)	NM_001193280|MID1|4281|midline 1 (Opitz/BBB syndrome)	NM_001193281|MID1|4281|midline 1 (Opitz/BBB syndrome)
hg18_v1_chr14_+_76362467_76362629	0.0436135	SOX2.p2	AK058106|C14orf166B|145497|chromosome 14 open reading frame 166B	NM_194287|C14orf166B|145497|chromosome 14 open reading frame 166B	AK125722|C14orf166B|145497|chromosome 14 open reading frame 166B	AK301762|C14orf166B|145497|chromosome 14 open reading frame 166B	BC062799|C14orf166B|145497|chromosome 14 open reading frame 166B	BC121159|C14orf166B|145497|chromosome 14 open reading frame 166B	BC121160|C14orf166B|145497|chromosome 14 open reading frame 166B
hg18_v1_chr1_+_100590640_100590743	0.0435312	SOX2.p2	BC071578|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)	AF064103|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)	AK310657|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)	AF000367|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)
hg18_v1_chr2_+_26110888_26111054	0.0434663	SOX2.p2	AF086917|RAB10|10890|RAB10, member RAS oncogene family	AF106681|RAB10|10890|RAB10, member RAS oncogene family	BC000896|RAB10|10890|RAB10, member RAS oncogene family	AF297660|RAB10|10890|RAB10, member RAS oncogene family	AF498945|RAB10|10890|RAB10, member RAS oncogene family	CR457303|RAB10|10890|RAB10, member RAS oncogene family	EU831649|RAB10|10890|RAB10, member RAS oncogene family	EU831733|RAB10|10890|RAB10, member RAS oncogene family	AF091032|RAB10|10890|RAB10, member RAS oncogene family
hg18_v1_chr22_-_37382252_37382366	0.043385	SOX2.p2	AK301819|LOC646851|646851|hypothetical LOC646851
hg18_v1_chr16_+_14201687_14201711	0.0433035	SOX2.p2	BC047761|MKL2|57496|MKL/myocardin-like 2
hg18_v1_chr17_-_7931745_7931745	0.0432494	SOX2.p2	AF038461|ALOX12B|242|arachidonate 12-lipoxygenase, 12R type	NM_001139|ALOX12B|242|arachidonate 12-lipoxygenase, 12R type
hg18_v1_chr15_+_72694387_72694387	0.043137	SOX2.p2	AK091692|CLK3|1198|CDC-like kinase 3	NM_001130028|CLK3|1198|CDC-like kinase 3
hg18_v1_chrX_-_13248438_13248438	0.0431105	SOX2.p2	AK302365|ATXN3L|92552|ataxin 3-like	NM_001135995|ATXN3L|92552|ataxin 3-like
hg18_v1_chr2_+_120233676_120234064	0.0430748	SOX2.p2	M68941|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)	NM_002830|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)	AK314836|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)	BC010674|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)
hg18_v1_chr16_-_30841938_30842090	0.0430541	SOX2.p2	BC101464|NCRNA00095|283932|non-protein coding RNA 95	BC101988|NCRNA00095|283932|non-protein coding RNA 95	BC105687|NCRNA00095|283932|non-protein coding RNA 95	BC105926|NCRNA00095|283932|non-protein coding RNA 95	AK092263|NCRNA00095|283932|non-protein coding RNA 95
hg18_v1_chr19_+_56766342_56766376	0.0430275	SOX2.p2	NM_007147|ZNF175|7728|zinc finger protein 175	BC007778|ZNF175|7728|zinc finger protein 175	AK292687|ZNF175|7728|zinc finger protein 175	BC052997|ZNF175|7728|zinc finger protein 175	D50419|ZNF175|7728|zinc finger protein 175
hg18_v1_chr18_-_28247193_28247194	0.0429408	SOX2.p2	
hg18_v1_chr6_-_111243309_111243529	0.0428164	SOX2.p2	BC024247|CDK19|23097|cyclin-dependent kinase 19
hg18_v1_chr4_-_14612766_14612849	0.0427267	SOX2.p2	
hg18_v1_chr5_-_27074407_27074449	0.0426784	SOX2.p2	BC107594|CDH9|1007|cadherin 9, type 2 (T1-cadherin)	BC109384|CDH9|1007|cadherin 9, type 2 (T1-cadherin)	BC113745|CDH9|1007|cadherin 9, type 2 (T1-cadherin)	AB035302|CDH9|1007|cadherin 9, type 2 (T1-cadherin)	AK307779|CDH9|1007|cadherin 9, type 2 (T1-cadherin)	NM_016279|CDH9|1007|cadherin 9, type 2 (T1-cadherin)	AK308697|CDH9|1007|cadherin 9, type 2 (T1-cadherin)
hg18_v1_chr14_-_20340830_20340875	0.0426736	SOX2.p2	CR600644|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)	AK312100|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)	BC022882|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)	CR593433|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)	BC005324|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)	NM_002933|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)	NM_198234|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)	NM_198235|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)
hg18_v1_chr17_+_39280041_39280110	0.0426643	SOX2.p2	AK298112|CD300LG|146894|CD300 molecule-like family member g	AK309938|CD300LG|146894|CD300 molecule-like family member g	NM_001168322|CD300LG|146894|CD300 molecule-like family member g	NM_001168323|CD300LG|146894|CD300 molecule-like family member g	NM_001168324|CD300LG|146894|CD300 molecule-like family member g	NM_145273|CD300LG|146894|CD300 molecule-like family member g	AF427619|CD300LG|146894|CD300 molecule-like family member g	AF427620|CD300LG|146894|CD300 molecule-like family member g	BC025395|CD300LG|146894|CD300 molecule-like family member g	AY358364|CD300LG|146894|CD300 molecule-like family member g
hg18_v1_chr15_-_80123935_80123941	0.0426641	SOX2.p2	AK094145|MEX3B|84206|mex-3 homolog B (C. elegans)
hg18_v1_chr1_-_149245503_149246008	0.0426406	SOX2.p2	BC032321|FAM63A|55793|family with sequence similarity 63, member A	AK303962|FAM63A|55793|family with sequence similarity 63, member A	AK125493|FAM63A|55793|family with sequence similarity 63, member A	AK002142|FAM63A|55793|family with sequence similarity 63, member A	NM_001163259|FAM63A|55793|family with sequence similarity 63, member A	NM_001163260|FAM63A|55793|family with sequence similarity 63, member A	CR594376|FAM63A|55793|family with sequence similarity 63, member A	BC014447|FAM63A|55793|family with sequence similarity 63, member A	NM_001040217|FAM63A|55793|family with sequence similarity 63, member A
hg18_v1_chr2_+_176724358_176724560	0.0424799	SOX2.p2	NM_014621|HOXD4|3233|homeobox D4	X04706|HOXD4|3233|homeobox D4	AK313885|HOXD4|3233|homeobox D4	BC016763|HOXD4|3233|homeobox D4	BC074797|HOXD4|3233|homeobox D4
hg18_v1_chr18_+_53862386_53862683	0.042349	SOX2.p2	NM_001144967|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	NM_015277|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like
hg18_v1_chr16_+_66464425_66464468	0.0423184	SOX2.p2	AK128582|EDC4|23644|enhancer of mRNA decapping 4
hg18_v1_chr19_-_18578577_18578629	0.0422593	SOX2.p2	AF059293|CRLF1|9244|cytokine receptor-like factor 1	BC044634|CRLF1|9244|cytokine receptor-like factor 1	AY358291|CRLF1|9244|cytokine receptor-like factor 1
hg18_v1_chr9_+_107464558_107464598	0.0422516	SOX2.p2	BC126373|TAL2|6887|T-cell acute lymphocytic leukemia 2	BC126375|TAL2|6887|T-cell acute lymphocytic leukemia 2	NM_005421|TAL2|6887|T-cell acute lymphocytic leukemia 2	BC069422|TAL2|6887|T-cell acute lymphocytic leukemia 2
hg18_v1_chr5_-_36337756_36337767	0.04221	SOX2.p2	BC017951|RANBP3L|202151|RAN binding protein 3-like	AK058151|RANBP3L|202151|RAN binding protein 3-like	AK302947|RANBP3L|202151|RAN binding protein 3-like	BC047660|RANBP3L|202151|RAN binding protein 3-like	NM_001161429|RANBP3L|202151|RAN binding protein 3-like	NM_145000|RANBP3L|202151|RAN binding protein 3-like
hg18_v1_chr4_-_82612049_82612120	0.0422009	SOX2.p2	AK291459|RASGEF1B|153020|RasGEF domain family, member 1B	BC036784|RASGEF1B|153020|RasGEF domain family, member 1B	AK303625|RASGEF1B|153020|RasGEF domain family, member 1B	AK056257|RASGEF1B|153020|RasGEF domain family, member 1B	NM_152545|RASGEF1B|153020|RasGEF domain family, member 1B
hg18_v1_chr5_-_140680470_140680517	0.0421701	SOX2.p2	U18062|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa	BC032737|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa	X97999|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa	BC022798|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa	BC013397|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa	AK314837|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa
hg18_v1_chrX_+_119268713_119268724	0.0420871	SOX2.p2	
hg18_v1_chr19_+_45948911_45949152	0.0418412	SOX2.p2	CR612581|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	CR604415|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	CR617901|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	CR614107|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	CR595370|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	CR613649|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	CR591403|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	CR593045|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	AK293140|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	CR597345|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	CR620634|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	AK313182|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	X06347|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	BC008290|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	CR611939|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	CR609533|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	CR622302|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A
hg18_v1_chr12_+_51777715_51777773	0.0418175	SOX2.p2	M62402|IGFBP6|3489|insulin-like growth factor binding protein 6	AK313158|IGFBP6|3489|insulin-like growth factor binding protein 6	BC003507|IGFBP6|3489|insulin-like growth factor binding protein 6	BC011708|IGFBP6|3489|insulin-like growth factor binding protein 6	CR590705|IGFBP6|3489|insulin-like growth factor binding protein 6	BC005007|IGFBP6|3489|insulin-like growth factor binding protein 6	DQ892995|IGFBP6|3489|insulin-like growth factor binding protein 6	DQ896243|IGFBP6|3489|insulin-like growth factor binding protein 6	CR541791|IGFBP6|3489|insulin-like growth factor binding protein 6	M69054|IGFBP6|3489|insulin-like growth factor binding protein 6
hg18_v1_chr7_+_116289827_116289828	0.0417882	SOX2.p2	AK314808|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2
hg18_v1_chr4_-_86106567_86106567	0.041774	SOX2.p2	NM_014991|WDFY3|23001|WD repeat and FYVE domain containing 3
hg18_v1_chr7_+_107088315_107088315	0.04177	SOX2.p2	AF030880|SLC26A4|5172|solute carrier family 26, member 4	NM_000441|SLC26A4|5172|solute carrier family 26, member 4
hg18_v1_chr6_-_117853710_117853738	0.041754	SOX2.p2	M34353|ROS1|6098|c-ros oncogene 1 , receptor tyrosine kinase	NM_002944|ROS1|6098|c-ros oncogene 1 , receptor tyrosine kinase
hg18_v1_chr1_-_203985896_203985931	0.0417374	SOX2.p2	BC000805|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1	AB049824|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1	AK300416|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1
hg18_v1_chr14_-_87529222_87529403	0.0417362	SOX2.p2	D25283|GALC|2581|galactosylceramidase	D25284|GALC|2581|galactosylceramidase	AK296530|GALC|2581|galactosylceramidase	L23116|GALC|2581|galactosylceramidase	AK294040|GALC|2581|galactosylceramidase
hg18_v1_chr3_-_71715431_71715905	0.0417224	SOX2.p2	AK122710|FOXP1|27086|forkhead box P1	BC005055|FOXP1|27086|forkhead box P1	BC054815|FOXP1|27086|forkhead box P1	BC071893|FOXP1|27086|forkhead box P1	BC080521|FOXP1|27086|forkhead box P1	BC068481|FOXP1|27086|forkhead box P1	NM_001012505|FOXP1|27086|forkhead box P1	NM_032682|FOXP1|27086|forkhead box P1
hg18_v1_chr6_-_10939095_10939097	0.0416528	SOX2.p2	AF505623|MAK|4117|male germ cell-associated kinase	NM_005906|MAK|4117|male germ cell-associated kinase	BC039825|MAK|4117|male germ cell-associated kinase
hg18_v1_chr12_-_43556338_43556406	0.0416228	SOX2.p2	AK056082|NELL2|4753|NEL-like 2 (chicken)	AK297521|NELL2|4753|NEL-like 2 (chicken)	AK309825|NELL2|4753|NEL-like 2 (chicken)	D83018|NELL2|4753|NEL-like 2 (chicken)
hg18_v1_chr21_+_37661063_37661169	0.0415801	SOX2.p2	AB015282|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A
hg18_v1_chr20_+_34428857_34428857	0.0415109	SOX2.p2	NM_014902|DLGAP4|22839|discs, large (Drosophila) homolog-associated protein 4
hg18_v1_chr20_-_43440290_43440446	0.0414586	SOX2.p2	BC036785|TP53TG5|27296|TP53 target 5	NM_014477|TP53TG5|27296|TP53 target 5	AB017802|TP53TG5|27296|TP53 target 5
hg18_v1_chr21_-_15358996_15359180	0.0414459	SOX2.p2	AK289786|NRIP1|8204|nuclear receptor interacting protein 1	NM_003489|NRIP1|8204|nuclear receptor interacting protein 1
hg18_v1_chr12_+_120944174_120944378	0.0414369	SOX2.p2	AK296159|BCL7A|605|B-cell CLL/lymphoma 7A	NM_001024808|BCL7A|605|B-cell CLL/lymphoma 7A	NM_020993|BCL7A|605|B-cell CLL/lymphoma 7A	AK316486|BCL7A|605|B-cell CLL/lymphoma 7A	BC113627|BCL7A|605|B-cell CLL/lymphoma 7A	BC094723|BCL7A|605|B-cell CLL/lymphoma 7A
hg18_v1_chr2_+_176737050_176737050	0.0414103	SOX2.p2	BC005124|HOXD3|3232|homeobox D3	NM_006898|HOXD3|3232|homeobox D3
hg18_v1_chr7_+_28692122_28692294	0.0413988	SOX2.p2	L05912|CREB5|9586|cAMP responsive element binding protein 5	AK300455|CREB5|9586|cAMP responsive element binding protein 5	BC059400|CREB5|9586|cAMP responsive element binding protein 5	NM_001011666|CREB5|9586|cAMP responsive element binding protein 5	AK316187|CREB5|9586|cAMP responsive element binding protein 5	AB209262|CREB5|9586|cAMP responsive element binding protein 5
hg18_v1_chr19_-_6230797_6230809	0.0413179	SOX2.p2	
hg18_v1_chr16_-_3008162_3008188	0.0412978	SOX2.p2	BC008934|CLDN6|9074|claudin 6	AK075329|CLDN6|9074|claudin 6	CR614114|CLDN6|9074|claudin 6	NM_021195|CLDN6|9074|claudin 6
hg18_v1_chr7_-_88262966_88262966	0.0412095	SOX2.p2	BC028365|C7orf62|219557|chromosome 7 open reading frame 62	NM_152706|C7orf62|219557|chromosome 7 open reading frame 62
hg18_v1_chr1_-_229071957_229071957	0.0411546	SOX2.p2	AK096166|C1orf198|84886|chromosome 1 open reading frame 198	NM_001136494|C1orf198|84886|chromosome 1 open reading frame 198
hg18_v1_chr3_-_127258299_127258307	0.0410867	SOX2.p2	AK093380|SLC41A3|54946|solute carrier family 41, member 3	NM_001008487|SLC41A3|54946|solute carrier family 41, member 3
hg18_v1_chr11_+_6904167_6904269	0.0410158	SOX2.p2	AF056618|ZNF215|7762|zinc finger protein 215	NM_013250|ZNF215|7762|zinc finger protein 215	AK298365|ZNF215|7762|zinc finger protein 215
hg18_v1_chr1_+_50347188_50347355	0.0409692	SOX2.p2	AY033997|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	BC036071|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	CR613627|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	AY033998|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	M62843|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
hg18_v1_chr7_+_149651202_149651473	0.0409137	SOX2.p2	NM_001142928|LRRC61|65999|leucine rich repeat containing 61	NM_023942|LRRC61|65999|leucine rich repeat containing 61	CR608476|LRRC61|65999|leucine rich repeat containing 61	CR625785|LRRC61|65999|leucine rich repeat containing 61	AK055954|LRRC61|65999|leucine rich repeat containing 61	CR596920|LRRC61|65999|leucine rich repeat containing 61	CR604731|LRRC61|65999|leucine rich repeat containing 61	CR619181|LRRC61|65999|leucine rich repeat containing 61	CR604499|LRRC61|65999|leucine rich repeat containing 61	CR606039|LRRC61|65999|leucine rich repeat containing 61	CR624936|LRRC61|65999|leucine rich repeat containing 61	CR608616|LRRC61|65999|leucine rich repeat containing 61	CR613542|LRRC61|65999|leucine rich repeat containing 61	CR622405|LRRC61|65999|leucine rich repeat containing 61
hg18_v1_chr20_-_43609409_43609478	0.0408166	SOX2.p2	AK126022|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)	AF286368|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)	AF286370|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)	AL118493|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)	BC053369|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)	BC044829|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)	AK301937|SPINLW1-WFDC6|100526773|SPINLW1-WFDC6 readthrough	BC003675|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)	AK311906|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)	NM_001198986|SPINLW1-WFDC6|100526773|SPINLW1-WFDC6 readthrough	NM_020398|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)
hg18_v1_chrX_-_15198509_15198509	0.040767	SOX2.p2	AK292270|ASB9|140462|ankyrin repeat and SOCS box containing 9	NM_001168531|ASB9|140462|ankyrin repeat and SOCS box containing 9
hg18_v1_chr6_+_43845915_43846077	0.040767	SOX2.p2	NM_001025366|VEGFA|7422|vascular endothelial growth factor A	NM_001025367|VEGFA|7422|vascular endothelial growth factor A	NM_001025368|VEGFA|7422|vascular endothelial growth factor A	NM_001025369|VEGFA|7422|vascular endothelial growth factor A	NM_001025370|VEGFA|7422|vascular endothelial growth factor A	NM_001033756|VEGFA|7422|vascular endothelial growth factor A	NM_001171622|VEGFA|7422|vascular endothelial growth factor A	NM_001171623|VEGFA|7422|vascular endothelial growth factor A	NM_001171624|VEGFA|7422|vascular endothelial growth factor A	NM_001171625|VEGFA|7422|vascular endothelial growth factor A	NM_001171626|VEGFA|7422|vascular endothelial growth factor A	NM_001171627|VEGFA|7422|vascular endothelial growth factor A	NM_001171628|VEGFA|7422|vascular endothelial growth factor A	NM_001171629|VEGFA|7422|vascular endothelial growth factor A	NM_001171630|VEGFA|7422|vascular endothelial growth factor A	NM_003376|VEGFA|7422|vascular endothelial growth factor A	BC058855|VEGFA|7422|vascular endothelial growth factor A	BC019867|VEGFA|7422|vascular endothelial growth factor A
hg18_v1_chr16_-_45422540_45422638	0.0407317	SOX2.p2	BC056676|C16orf87|388272|chromosome 16 open reading frame 87	BX647945|C16orf87|388272|chromosome 16 open reading frame 87	NM_001001436|C16orf87|388272|chromosome 16 open reading frame 87
hg18_v1_chr10_-_13430024_13430067	0.0406988	SOX2.p2	AK301568|SEPHS1|22929|selenophosphate synthetase 1	AK309829|SEPHS1|22929|selenophosphate synthetase 1
hg18_v1_chr12_+_51777684_51777705	0.0406833	SOX2.p2	NM_002178|IGFBP6|3489|insulin-like growth factor binding protein 6	BC010162|IGFBP6|3489|insulin-like growth factor binding protein 6
hg18_v1_chr15_+_80434362_80434411	0.0406712	SOX2.p2	BC066934|UBE2Q2P2|100134869|ubiquitin-conjugating enzyme E2Q family member 2 pseudogene 2
hg18_v1_chr17_-_27693246_27693394	0.040659	SOX2.p2	AF052093|C17orf75|64149|chromosome 17 open reading frame 75	CR618435|C17orf75|64149|chromosome 17 open reading frame 75	BC054035|C17orf75|64149|chromosome 17 open reading frame 75	CR599009|C17orf75|64149|chromosome 17 open reading frame 75	BC047325|C17orf75|64149|chromosome 17 open reading frame 75	BC026017|C17orf75|64149|chromosome 17 open reading frame 75	BC035715|C17orf75|64149|chromosome 17 open reading frame 75	AF305686|C17orf75|64149|chromosome 17 open reading frame 75	NM_022344|C17orf75|64149|chromosome 17 open reading frame 75
hg18_v1_chr22_+_27994216_27994339	0.0405898	SOX2.p2	CR625247|EWSR1|2130|Ewing sarcoma breakpoint region 1	X66899|EWSR1|2130|Ewing sarcoma breakpoint region 1	BC000527|EWSR1|2130|Ewing sarcoma breakpoint region 1	CR604952|EWSR1|2130|Ewing sarcoma breakpoint region 1	CR608375|EWSR1|2130|Ewing sarcoma breakpoint region 1	AK127624|EWSR1|2130|Ewing sarcoma breakpoint region 1	CR456490|EWSR1|2130|Ewing sarcoma breakpoint region 1	AK225102|EWSR1|2130|Ewing sarcoma breakpoint region 1	AK056309|EWSR1|2130|Ewing sarcoma breakpoint region 1	BC004817|EWSR1|2130|Ewing sarcoma breakpoint region 1	CR604639|EWSR1|2130|Ewing sarcoma breakpoint region 1	AK056681|EWSR1|2130|Ewing sarcoma breakpoint region 1	AK225096|EWSR1|2130|Ewing sarcoma breakpoint region 1	BC072442|EWSR1|2130|Ewing sarcoma breakpoint region 1	BC011048|EWSR1|2130|Ewing sarcoma breakpoint region 1	AF327066|EWSR1|2130|Ewing sarcoma breakpoint region 1	CU013087|EWSR1|2130|Ewing sarcoma breakpoint region 1	CU013375|EWSR1|2130|Ewing sarcoma breakpoint region 1
hg18_v1_chr15_+_88345612_88345774	0.0405669	SOX2.p2	BC020301|ZNF710|374655|zinc finger protein 710	AK094712|ZNF710|374655|zinc finger protein 710	NM_198526|ZNF710|374655|zinc finger protein 710
hg18_v1_chrX_+_30175191_30175243	0.0405391	SOX2.p2	NM_177404|MAGEB1|4112|melanoma antigen family B, 1	BC013772|MAGEB1|4112|melanoma antigen family B, 1
hg18_v1_chr21_+_30895276_30895310	0.0405345	SOX2.p2	AB096953|KRTAP22-1|337979|keratin associated protein 22-1	BC101682|KRTAP22-1|337979|keratin associated protein 22-1	BC101686|KRTAP22-1|337979|keratin associated protein 22-1	NM_181620|KRTAP22-1|337979|keratin associated protein 22-1
hg18_v1_chr12_+_54721952_54721988	0.0405081	SOX2.p2	NM_001029|RPS26|6231|ribosomal protein S26	CR611958|RPS26|6231|ribosomal protein S26	BC002604|RPS26|6231|ribosomal protein S26
hg18_v1_chr8_+_11697706_11697750	0.0405039	SOX2.p2	CR592418|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR613379|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	L06105|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	BC029641|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	BC034440|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR602308|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR610548|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR626247|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	L06070|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	BT006704|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR457033|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	DQ890697|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	DQ893882|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1
hg18_v1_chr1_+_66230977_66231005	0.0404915	SOX2.p2	AB209081|PDE4B|5142|phosphodiesterase 4B, cAMP-specific	NM_001037340|PDE4B|5142|phosphodiesterase 4B, cAMP-specific	AK290006|PDE4B|5142|phosphodiesterase 4B, cAMP-specific
hg18_v1_chr8_-_101384633_101384662	0.0404304	SOX2.p2	AB271913|RNF19A|25897|ring finger protein 19A	AB029316|RNF19A|25897|ring finger protein 19A	NM_015435|RNF19A|25897|ring finger protein 19A
hg18_v1_chr19_+_19164732_19164772	0.0403384	SOX2.p2	AF105427|RFXANK|8625|regulatory factor X-associated ankyrin-containing protein	CR617522|RFXANK|8625|regulatory factor X-associated ankyrin-containing protein	AF077196|RFXANK|8625|regulatory factor X-associated ankyrin-containing protein	AF105428|RFXANK|8625|regulatory factor X-associated ankyrin-containing protein
hg18_v1_chr1_-_149385556_149385787	0.0403145	SOX2.p2	AF339152|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	AF339153|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	AF339154|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	AB022434|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	AB058772|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	AK302862|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	AK311613|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	NM_001178061|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	NM_001178062|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	NM_030913|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C
hg18_v1_chrX_-_1291526_1291642	0.0403123	SOX2.p2	AB052639|CRLF2|64109|cytokine receptor-like factor 2	AF338733|CRLF2|64109|cytokine receptor-like factor 2	AY775789|CRLF2|64109|cytokine receptor-like factor 2	NM_001012288|CRLF2|64109|cytokine receptor-like factor 2	AF142570|CRLF2|64109|cytokine receptor-like factor 2	NM_022148|CRLF2|64109|cytokine receptor-like factor 2	AK026800|CRLF2|64109|cytokine receptor-like factor 2	AK223303|CRLF2|64109|cytokine receptor-like factor 2
hg18_v1_chr5_+_180258682_180258879	0.0402909	SOX2.p2	NM_001040462|BTNL8|79908|butyrophilin-like 8	NM_001159707|BTNL8|79908|butyrophilin-like 8	NM_001159708|BTNL8|79908|butyrophilin-like 8	NM_001159709|BTNL8|79908|butyrophilin-like 8	NM_024850|BTNL8|79908|butyrophilin-like 8	AK296597|BTNL8|79908|butyrophilin-like 8	AY358523|BTNL8|79908|butyrophilin-like 8	AK025111|BTNL8|79908|butyrophilin-like 8	AK225213|BTNL8|79908|butyrophilin-like 8	BC119696|BTNL8|79908|butyrophilin-like 8	BC119697|BTNL8|79908|butyrophilin-like 8
hg18_v1_chr2_+_143603439_143603483	0.0401552	SOX2.p2	AK303490|ARHGAP15|55843|Rho GTPase activating protein 15	BC016701|ARHGAP15|55843|Rho GTPase activating protein 15	BC038976|ARHGAP15|55843|Rho GTPase activating protein 15
hg18_v1_chr5_+_140757787_140757878	0.0401386	SOX2.p2	BC093877|PCDHGB5|56101|protocadherin gamma subfamily B, 5	BC093879|PCDHGB5|56101|protocadherin gamma subfamily B, 5	AF152334|PCDHGB5|56101|protocadherin gamma subfamily B, 5	AF152521|PCDHGB5|56101|protocadherin gamma subfamily B, 5	NM_018925|PCDHGB5|56101|protocadherin gamma subfamily B, 5	NM_032099|PCDHGB5|56101|protocadherin gamma subfamily B, 5
hg18_v1_chr12_+_108310906_108310906	0.0401224	SOX2.p2	NM_001101421|MYO1H|283446|myosin IH
hg18_v1_chr7_+_127883117_127883287	0.0400705	SOX2.p2	NM_001098786|C7orf68|29923|chromosome 7 open reading frame 68	NM_013332|C7orf68|29923|chromosome 7 open reading frame 68	AF144755|C7orf68|29923|chromosome 7 open reading frame 68	CR624903|C7orf68|29923|chromosome 7 open reading frame 68	CR624882|C7orf68|29923|chromosome 7 open reading frame 68	AK024729|C7orf68|29923|chromosome 7 open reading frame 68	AK222583|C7orf68|29923|chromosome 7 open reading frame 68	BC008573|C7orf68|29923|chromosome 7 open reading frame 68	BC001863|C7orf68|29923|chromosome 7 open reading frame 68	CR623904|C7orf68|29923|chromosome 7 open reading frame 68	BC093742|C7orf68|29923|chromosome 7 open reading frame 68	BC112183|C7orf68|29923|chromosome 7 open reading frame 68
hg18_v1_chr17_+_28279040_28279228	0.0400274	SOX2.p2	CR608592|TMEM98|26022|transmembrane protein 98	NM_001033504|TMEM98|26022|transmembrane protein 98	NM_015544|TMEM98|26022|transmembrane protein 98	CR605381|TMEM98|26022|transmembrane protein 98	CR608363|TMEM98|26022|transmembrane protein 98	CR596801|TMEM98|26022|transmembrane protein 98	CR597844|TMEM98|26022|transmembrane protein 98	CR605299|TMEM98|26022|transmembrane protein 98
hg18_v1_chr15_+_83724743_83725047	0.039978	SOX2.p2	AK125331|AKAP13|11214|A kinase (PRKA) anchor protein 13	BC050312|AKAP13|11214|A kinase (PRKA) anchor protein 13	NM_006738|AKAP13|11214|A kinase (PRKA) anchor protein 13	NM_007200|AKAP13|11214|A kinase (PRKA) anchor protein 13	AF406992|AKAP13|11214|A kinase (PRKA) anchor protein 13
hg18_v1_chr3_+_123996560_123996653	0.0399771	SOX2.p2	NM_032839|DIRC2|84925|disrupted in renal carcinoma 2	AK027690|DIRC2|84925|disrupted in renal carcinoma 2	AK291176|DIRC2|84925|disrupted in renal carcinoma 2	BC039821|DIRC2|84925|disrupted in renal carcinoma 2	BC033738|DIRC2|84925|disrupted in renal carcinoma 2
hg18_v1_chr8_+_87180248_87180273	0.0398213	SOX2.p2	BC065207|ATP6V0D2|245972|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2	AK096027|ATP6V0D2|245972|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2	NM_152565|ATP6V0D2|245972|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2	AY079172|ATP6V0D2|245972|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2
hg18_v1_chr19_+_11327173_11327218	0.0397983	SOX2.p2	AK094869|LPPR2|64748|lipid phosphate phosphatase-related protein type 2	BC009378|LPPR2|64748|lipid phosphate phosphatase-related protein type 2
hg18_v1_chr11_+_118497484_118497545	0.0397434	SOX2.p2	NM_015517|HINFP|25988|histone H4 transcription factor	NM_198971|HINFP|25988|histone H4 transcription factor	CR599076|HINFP|25988|histone H4 transcription factor	AK300288|HINFP|25988|histone H4 transcription factor	BC017234|HINFP|25988|histone H4 transcription factor	AK056362|HINFP|25988|histone H4 transcription factor	BC012856|HINFP|25988|histone H4 transcription factor	AK301452|HINFP|25988|histone H4 transcription factor
hg18_v1_chr1_+_168767864_168767990	0.0396437	SOX2.p2	AK308339|GORAB|92344|golgin, RAB6-interacting	NM_001146039|GORAB|92344|golgin, RAB6-interacting	NM_152281|GORAB|92344|golgin, RAB6-interacting	AK021814|GORAB|92344|golgin, RAB6-interacting	BC064945|GORAB|92344|golgin, RAB6-interacting	BC047476|GORAB|92344|golgin, RAB6-interacting	AK057661|GORAB|92344|golgin, RAB6-interacting
hg18_v1_chr4_-_110843999_110844081	0.0396297	SOX2.p2	DQ894589|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	EU176306|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	U20537|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	BC000305|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	BC004460|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	NM_001226|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	NM_032992|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	U20536|CASP6|839|caspase 6, apoptosis-related cysteine peptidase
hg18_v1_chr8_+_98725604_98725667	0.0395632	SOX2.p2	BC014977|MTDH|92140|metadherin	AF501310|MTDH|92140|metadherin
hg18_v1_chr12_+_111980044_111980102	0.0395242	SOX2.p2	NM_004416|DTX1|1840|deltex homolog 1 (Drosophila)	BC048216|DTX1|1840|deltex homolog 1 (Drosophila)
hg18_v1_chr17_+_25828546_25828573	0.0395197	SOX2.p2	AK000606|GOSR1|9527|golgi SNAP receptor complex member 1	AK291381|GOSR1|9527|golgi SNAP receptor complex member 1	NM_001007024|GOSR1|9527|golgi SNAP receptor complex member 1	NM_001007025|GOSR1|9527|golgi SNAP receptor complex member 1	NM_004871|GOSR1|9527|golgi SNAP receptor complex member 1	AK298714|GOSR1|9527|golgi SNAP receptor complex member 1	AF047438|GOSR1|9527|golgi SNAP receptor complex member 1	BC012620|GOSR1|9527|golgi SNAP receptor complex member 1	AF073926|GOSR1|9527|golgi SNAP receptor complex member 1	BC040471|GOSR1|9527|golgi SNAP receptor complex member 1
hg18_v1_chr2_+_28892366_28892384	0.0393215	SOX2.p2	NM_001008779|SPDYA|245711|speedy homolog A (Xenopus laevis)	AY820303|SPDYA|245711|speedy homolog A (Xenopus laevis)	AY820304|SPDYA|245711|speedy homolog A (Xenopus laevis)
hg18_v1_chr1_-_45729382_45729458	0.0392314	SOX2.p2	BX648441|TESK2|10420|testis-specific kinase 2	AK027573|TESK2|10420|testis-specific kinase 2	AK294172|TESK2|10420|testis-specific kinase 2	BC022194|TESK2|10420|testis-specific kinase 2	AB057597|TESK2|10420|testis-specific kinase 2	AJ132545|TESK2|10420|testis-specific kinase 2	AK299269|TESK2|10420|testis-specific kinase 2	NM_007170|TESK2|10420|testis-specific kinase 2	AK302494|TESK2|10420|testis-specific kinase 2
hg18_v1_chr19_+_1199548_1199600	0.039191	SOX2.p2	NM_177401|MIDN|90007|midnolin
hg18_v1_chr12_+_95112385_95112412	0.039182	SOX2.p2	BC017371|ELK3|2004|ELK3, ETS-domain protein (SRF accessory protein 2)
hg18_v1_chr3_+_38322430_38322486	0.0391745	SOX2.p2	AB011082|SLC22A14|9389|solute carrier family 22, member 14	BC126482|SLC22A14|9389|solute carrier family 22, member 14	BC130543|SLC22A14|9389|solute carrier family 22, member 14	BC144079|SLC22A14|9389|solute carrier family 22, member 14	NM_004803|SLC22A14|9389|solute carrier family 22, member 14	BC075070|SLC22A14|9389|solute carrier family 22, member 14	BC075071|SLC22A14|9389|solute carrier family 22, member 14
hg18_v1_chr1_+_110361634_110361667	0.0391615	SOX2.p2	BC003631|AHCYL1|10768|adenosylhomocysteinase-like 1
hg18_v1_chr1_-_149213778_149213809	0.0391562	SOX2.p2	AK290989|LASS2|29956|LAG1 homolog, ceramide synthase 2	BC001357|LASS2|29956|LAG1 homolog, ceramide synthase 2
hg18_v1_chr6_+_32090516_32090597	0.0390751	SOX2.p2	BC063289|C4A|720|complement component 4A (Rodgers blood group)	AK304564|C4B|721|complement component 4B (Chido blood group)	NM_001002029|C4B|721|complement component 4B (Chido blood group)	NM_007293|C4A|720|complement component 4A (Rodgers blood group)	AB209989|C4A|720|complement component 4A (Rodgers blood group)	BC146673|C4A|720|complement component 4A (Rodgers blood group)	BC151204|C4A|720|complement component 4A (Rodgers blood group)	BC144546|C4A|720|complement component 4A (Rodgers blood group)	BC146849|C4A|720|complement component 4A (Rodgers blood group)	BC171786|C4A|720|complement component 4A (Rodgers blood group)
hg18_v1_chr3_-_121117647_121117670	0.0390709	SOX2.p2	CR615239|GSK3B|2932|glycogen synthase kinase 3 beta
hg18_v1_chr1_-_116185215_116185271	0.0389962	SOX2.p2	BC096359|NHLH2|4808|nescient helix loop helix 2	BC096360|NHLH2|4808|nescient helix loop helix 2	M96740|NHLH2|4808|nescient helix loop helix 2	NM_005599|NHLH2|4808|nescient helix loop helix 2
hg18_v1_chr9_-_135922912_135923117	0.0388748	SOX2.p2	D26362|BRD3|8019|bromodomain containing 3	BC010699|BRD3|8019|bromodomain containing 3	NM_007371|BRD3|8019|bromodomain containing 3
hg18_v1_chr8_+_12847521_12847553	0.0388101	SOX2.p2	AK296010|KIAA1456|57604|KIAA1456	NM_020844|KIAA1456|57604|KIAA1456
hg18_v1_chr5_-_36036883_36036886	0.0387813	SOX2.p2	BC035012|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1	NM_001171873|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1
hg18_v1_chr8_+_118032370_118032398	0.0387557	SOX2.p2	AK298294|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8	NM_001172813|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8	NM_001172815|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8	AL713790|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8
hg18_v1_chr1_+_65503011_65503024	0.0386958	SOX2.p2	AK296408|DNAJC6|9829|DnaJ (Hsp40) homolog, subfamily C, member 6	NM_014787|DNAJC6|9829|DnaJ (Hsp40) homolog, subfamily C, member 6	AB007942|DNAJC6|9829|DnaJ (Hsp40) homolog, subfamily C, member 6
hg18_v1_chr1_-_224563820_224563820	0.0385564	SOX2.p2	BC045625|LIN9|286826|lin-9 homolog (C. elegans)	NM_173083|LIN9|286826|lin-9 homolog (C. elegans)
hg18_v1_chr19_+_3523958_3523999	0.0385022	SOX2.p2	AK314201|HMG20B|10362|high-mobility group 20B	AK090733|HMG20B|10362|high-mobility group 20B	AK310601|HMG20B|10362|high-mobility group 20B	AF318366|HMG20B|10362|high-mobility group 20B
hg18_v1_chr5_+_132021763_132021816	0.0383189	SOX2.p2	BC096138|IL13|3596|interleukin 13	BC096139|IL13|3596|interleukin 13	BC096140|IL13|3596|interleukin 13	BC096141|IL13|3596|interleukin 13	NM_002188|IL13|3596|interleukin 13	X69079|IL13|3596|interleukin 13	L06801|IL13|3596|interleukin 13	AF043334|IL13|3596|interleukin 13
hg18_v1_chr11_-_5494391_5494531	0.0382774	SOX2.p2	BC012183|UBQLNL|143630|ubiquilin-like	BC034977|UBQLNL|143630|ubiquilin-like	AK057255|UBQLNL|143630|ubiquilin-like	NM_145053|UBQLNL|143630|ubiquilin-like
hg18_v1_chr9_-_34610499_34610533	0.0382732	SOX2.p2	AK091661|DCTN3|11258|dynactin 3 (p22)
hg18_v1_chr4_-_54625522_54625525	0.0382257	SOX2.p2	CR624224|CHIC2|26511|cysteine-rich hydrophobic domain 2
hg18_v1_chrX_+_118598325_118598325	0.038067	SOX2.p2	BC042021|UBE2A|7319|ubiquitin-conjugating enzyme E2A (RAD6 homolog)	NM_181777|UBE2A|7319|ubiquitin-conjugating enzyme E2A (RAD6 homolog)
hg18_v1_chr5_-_140680523_140680549	0.0380231	SOX2.p2	NM_005642|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa
hg18_v1_chr19_-_12641206_12641249	0.0379815	SOX2.p2	BC001192|C19orf56|51398|chromosome 19 open reading frame 56	AK311944|C19orf56|51398|chromosome 19 open reading frame 56	AF059620|C19orf56|51398|chromosome 19 open reading frame 56	BC042919|C19orf56|51398|chromosome 19 open reading frame 56	BC061912|C19orf56|51398|chromosome 19 open reading frame 56
hg18_v1_chr6_-_79844618_79844656	0.0378078	SOX2.p2	BC021905|PHIP|55023|pleckstrin homology domain interacting protein
hg18_v1_chr1_-_149213751_149213773	0.0377901	SOX2.p2	BC010032|LASS2|29956|LAG1 homolog, ceramide synthase 2
hg18_v1_chrX_+_108666891_108667130	0.0377537	SOX2.p2	AF246127|NXT2|55916|nuclear transport factor 2-like export factor 2	AJ277591|NXT2|55916|nuclear transport factor 2-like export factor 2	AJ278323|NXT2|55916|nuclear transport factor 2-like export factor 2
hg18_v1_chr3_+_185515543_185515977	0.0377114	SOX2.p2	NM_182917|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AK131407|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AF281070|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AY082886|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AF002815|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AB210013|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1
hg18_v1_chr12_-_51233001_51233197	0.0374764	SOX2.p2	AJ308601|KRT71|112802|keratin 71	EU832765|KRT71|112802|keratin 71	GQ129308|KRT71|112802|keratin 71	AJ308600|KRT71|112802|keratin 71	BC103917|KRT71|112802|keratin 71	BC103918|KRT71|112802|keratin 71	AJ308599|KRT71|112802|keratin 71	AK122795|KRT71|112802|keratin 71	NM_033448|KRT71|112802|keratin 71
hg18_v1_chr2_-_179367925_179367967	0.0374593	SOX2.p2	X98114|TTN|7273|titin	X98115|TTN|7273|titin
hg18_v1_chr3_+_9748395_9748415	0.0373879	SOX2.p2	AK293865|BRPF1|7862|bromodomain and PHD finger containing, 1
hg18_v1_chr3_-_153541468_153541468	0.0373291	SOX2.p2	AY358260|TMEM14E|645843|transmembrane protein 14E	NM_001123228|TMEM14E|645843|transmembrane protein 14E
hg18_v1_chr19_-_61431470_61431491	0.0373037	SOX2.p2	BC002636|ZSCAN5A|79149|zinc finger and SCAN domain containing 5A	NM_024303|ZSCAN5A|79149|zinc finger and SCAN domain containing 5A	AK098700|ZSCAN5A|79149|zinc finger and SCAN domain containing 5A
hg18_v1_chr1_+_110683580_110683580	0.0372796	SOX2.p2	BC047479|RBM15|64783|RNA binding motif protein 15
hg18_v1_chr11_+_59027624_59027624	0.0372742	SOX2.p2	NM_001004706|OR4D11|219986|olfactory receptor, family 4, subfamily D, member 11
hg18_v1_chr6_-_24827265_24827381	0.037238	SOX2.p2	AK022681|C6orf62|81688|chromosome 6 open reading frame 62	AB075502|C6orf62|81688|chromosome 6 open reading frame 62	AL136632|C6orf62|81688|chromosome 6 open reading frame 62	NM_030939|C6orf62|81688|chromosome 6 open reading frame 62
hg18_v1_chrX_-_154495686_154495815	0.0371696	SOX2.p2	AF373407|TMLHE|55217|trimethyllysine hydroxylase, epsilon	BC025269|TMLHE|55217|trimethyllysine hydroxylase, epsilon	BC009673|TMLHE|55217|trimethyllysine hydroxylase, epsilon	CR610079|TMLHE|55217|trimethyllysine hydroxylase, epsilon	CR610946|TMLHE|55217|trimethyllysine hydroxylase, epsilon	AK291694|TMLHE|55217|trimethyllysine hydroxylase, epsilon	CR595358|TMLHE|55217|trimethyllysine hydroxylase, epsilon	AK001589|TMLHE|55217|trimethyllysine hydroxylase, epsilon	NM_001184797|TMLHE|55217|trimethyllysine hydroxylase, epsilon	NM_018196|TMLHE|55217|trimethyllysine hydroxylase, epsilon
hg18_v1_chr2_-_39517633_39517794	0.0371648	SOX2.p2	EU832785|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3	GQ129258|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3	NM_003618|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3	AK314487|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3
hg18_v1_chr17_+_52689372_52689372	0.0371354	SOX2.p2	AK093888|MSI2|124540|musashi homolog 2 (Drosophila)	NM_170721|MSI2|124540|musashi homolog 2 (Drosophila)
hg18_v1_chr19_-_63722732_63722798	0.03706	SOX2.p2	BC024738|ZBTB45|84878|zinc finger and BTB domain containing 45	NM_032792|ZBTB45|84878|zinc finger and BTB domain containing 45
hg18_v1_chr12_+_54316910_54316942	0.0370498	SOX2.p2	BC136914|OR10P1|121130|olfactory receptor, family 10, subfamily P, member 1	NM_206899|OR10P1|121130|olfactory receptor, family 10, subfamily P, member 1
hg18_v1_chr7_-_136678815_136678871	0.0370393	SOX2.p2	D90226|PTN|5764|pleiotrophin
hg18_v1_chr11_+_69165065_69165118	0.0370168	SOX2.p2	AK299044|CCND1|595|cyclin D1	AK313136|CCND1|595|cyclin D1	X59798|CCND1|595|cyclin D1	BC025302|CCND1|595|cyclin D1	M74092|CCND1|595|cyclin D1	M64349|CCND1|595|cyclin D1
hg18_v1_chr10_-_123677370_123677661	0.0369549	SOX2.p2	AK296356|ATE1|11101|arginyltransferase 1	AF079098|ATE1|11101|arginyltransferase 1	AF079099|ATE1|11101|arginyltransferase 1	AK303604|ATE1|11101|arginyltransferase 1	AK313057|ATE1|11101|arginyltransferase 1	BC022026|ATE1|11101|arginyltransferase 1	NM_001001976|ATE1|11101|arginyltransferase 1	NM_007041|ATE1|11101|arginyltransferase 1
hg18_v1_chr5_-_111120817_111120853	0.0369342	SOX2.p2	AK315617|C5orf13|9315|chromosome 5 open reading frame 13	NM_004772|C5orf13|9315|chromosome 5 open reading frame 13	U30521|C5orf13|9315|chromosome 5 open reading frame 13
hg18_v1_chr1_-_151333624_151333624	0.0368792	SOX2.p2	M20030|SPRR2E|6704|small proline-rich protein 2E	NM_001024209|SPRR2E|6704|small proline-rich protein 2E
hg18_v1_chr5_-_134762738_134762758	0.0367619	SOX2.p2	CR599382|H2AFY|9555|H2A histone family, member Y	CR622217|H2AFY|9555|H2A histone family, member Y
hg18_v1_chr10_+_17312654_17312716	0.0366949	SOX2.p2	CR609103|VIM|7431|vimentin
hg18_v1_chr1_-_167603623_167603809	0.0366122	SOX2.p2	CR605539|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	AB209049|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	CR599535|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	BC006983|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	AK290701|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	AF153191|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	AK094513|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	AK301917|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	NM_013330|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	NM_197972|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)
hg18_v1_chrX_-_13866366_13866425	0.0364817	SOX2.p2	
hg18_v1_chr16_+_87164319_87164340	0.0364607	SOX2.p2	AK225807|ZC3H18|124245|zinc finger CCCH-type containing 18
hg18_v1_chr5_-_147191428_147191452	0.0364604	SOX2.p2	NM_003122|SPINK1|6690|serine peptidase inhibitor, Kazal type 1
hg18_v1_chr12_-_8706746_8706753	0.0364554	SOX2.p2	AK124368|MFAP5|8076|microfibrillar associated protein 5
hg18_v1_chr20_-_34005619_34005680	0.0364243	SOX2.p2	AM392883|SCAND1|51282|SCAN domain containing 1	AM393129|SCAND1|51282|SCAN domain containing 1	CR457188|SCAND1|51282|SCAN domain containing 1	EU446495|SCAND1|51282|SCAN domain containing 1
hg18_v1_chr9_-_79835970_79836038	0.0364204	SOX2.p2	AF011496|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	AF329284|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	AF493896|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	AM392842|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	AM393393|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	AM393764|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	L76256|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	BC075097|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	BC075096|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	U40038|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	BC057777|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	BC067850|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	BC069520|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	NM_002072|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide
hg18_v1_chr12_-_16652202_16652290	0.0363514	SOX2.p2	AF258348|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	BC017777|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	AB044746|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	AK095595|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	AK308826|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	NM_001001395|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg18_v1_chr16_-_4263001_4263026	0.0363327	SOX2.p2	NM_003223|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)	S73885|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)
hg18_v1_chr10_-_105208634_105208637	0.036253	SOX2.p2	BC036193|CALHM1|255022|calcium homeostasis modulator 1	BC036208|CALHM1|255022|calcium homeostasis modulator 1	NM_001001412|CALHM1|255022|calcium homeostasis modulator 1
hg18_v1_chr3_+_134976965_134976967	0.0362213	SOX2.p2	U88581|TF|7018|transferrin
hg18_v1_chr6_+_27215039_27215066	0.0361759	SOX2.p2	BC016336|HIST1H4I|8294|histone cluster 1, H4i	CR599017|HIST1H4I|8294|histone cluster 1, H4i	BC075806|HIST1H4I|8294|histone cluster 1, H4i	BC066250|HIST1H4I|8294|histone cluster 1, H4i	BC067496|HIST1H4I|8294|histone cluster 1, H4i	BC067497|HIST1H4I|8294|histone cluster 1, H4i	NM_003495|HIST1H4I|8294|histone cluster 1, H4i
hg18_v1_chr20_+_2743613_2743679	0.0361055	SOX2.p2	AK312218|C20orf141|128653|chromosome 20 open reading frame 141	BC014591|C20orf141|128653|chromosome 20 open reading frame 141	NM_080739|C20orf141|128653|chromosome 20 open reading frame 141	AL713708|C20orf141|128653|chromosome 20 open reading frame 141
hg18_v1_chr19_+_11327061_11327170	0.0360732	SOX2.p2	NM_001170635|LPPR2|64748|lipid phosphate phosphatase-related protein type 2	NM_022737|LPPR2|64748|lipid phosphate phosphatase-related protein type 2	AK023117|LPPR2|64748|lipid phosphate phosphatase-related protein type 2	AY304516|LPPR2|64748|lipid phosphate phosphatase-related protein type 2	AK225482|LPPR2|64748|lipid phosphate phosphatase-related protein type 2
hg18_v1_chr19_+_50086299_50086349	0.0360005	SOX2.p2	NM_001128916|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	NM_001128917|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	NM_006114|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	BC047528|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	AF043250|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	CR593671|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	CR592041|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	CR599747|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	CR600311|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	CR601010|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)
hg18_v1_chr1_-_156937065_156937109	0.0359697	SOX2.p2	NM_001005279|OR6K2|81448|olfactory receptor, family 6, subfamily K, member 2	BC137022|OR6K2|81448|olfactory receptor, family 6, subfamily K, member 2
hg18_v1_chrX_+_108666725_108666765	0.0359622	SOX2.p2	AF201942|NXT2|55916|nuclear transport factor 2-like export factor 2	BC014888|NXT2|55916|nuclear transport factor 2-like export factor 2	AF212223|NXT2|55916|nuclear transport factor 2-like export factor 2
hg18_v1_chr12_-_30740072_30740195	0.0358924	SOX2.p2	NM_006390|IPO8|10526|importin 8
hg18_v1_chr8_-_38577891_38577956	0.0358148	SOX2.p2	
hg18_v1_chr9_-_98104206_98104254	0.0357834	SOX2.p2	BT019371|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3	CR541894|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3	DQ891812|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3	DQ894995|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3	BC034281|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3	NM_000197|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3	U05659|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3
hg18_v1_chr8_+_17866373_17866408	0.035769	SOX2.p2	AF068293|PCM1|5108|pericentriolar material 1
hg18_v1_chr5_-_41546384_41546486	0.0357565	SOX2.p2	AK127142|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3	BX648329|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3	NM_001005473|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3
hg18_v1_chr1_+_243199690_243199793	0.0357502	SOX2.p2	NM_032328|EFCAB2|84288|EF-hand calcium binding domain 2
hg18_v1_chr5_+_176492662_176492685	0.0356031	SOX2.p2	NM_172349|NSD1|64324|nuclear receptor binding SET domain protein 1
hg18_v1_chr8_+_133948384_133948427	0.0355677	SOX2.p2	AK303666|TG|7038|thyroglobulin	NM_003235|TG|7038|thyroglobulin	X05615|TG|7038|thyroglobulin	BC140933|TG|7038|thyroglobulin	U93033|TG|7038|thyroglobulin	X02154|TG|7038|thyroglobulin
hg18_v1_chr11_-_122357545_122357588	0.035564	SOX2.p2	AB231738|BSX|390259|brain-specific homeobox	NM_001098169|BSX|390259|brain-specific homeobox
hg18_v1_chr15_-_63069146_63069229	0.0355571	SOX2.p2	AK172849|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	AK225527|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	AK312943|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	CR592296|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	CR605959|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	CR593134|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	CR613754|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	BC000244|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)
hg18_v1_chr6_-_90119068_90119156	0.0355334	SOX2.p2	AJ245898|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast)	AF151834|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast)
hg18_v1_chr12_-_94469357_94469393	0.0355271	SOX2.p2	AL136825|USP44|84101|ubiquitin specific peptidase 44	NM_032147|USP44|84101|ubiquitin specific peptidase 44
hg18_v1_chr12_+_22669352_22669477	0.0355245	SOX2.p2	BC006111|ETNK1|55500|ethanolamine kinase 1	AL137750|ETNK1|55500|ethanolamine kinase 1	AK074425|ETNK1|55500|ethanolamine kinase 1
hg18_v1_chrX_+_77052879_77052918	0.0354881	SOX2.p2	AB117973|ATP7A|538|ATPase, Cu++ transporting, alpha polypeptide	AB208828|ATP7A|538|ATPase, Cu++ transporting, alpha polypeptide
hg18_v1_chr6_+_132000134_132000217	0.0354559	SOX2.p2	AK024899|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3	AK296080|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3	AK310691|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3	AK315893|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3	NM_005021|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3	AK292903|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3	EF560735|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3	DQ234347|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3
hg18_v1_chr5_+_126140949_126141098	0.0354272	SOX2.p2	DQ891592|LMNB1|4001|lamin B1	EU176582|LMNB1|4001|lamin B1
hg18_v1_chr6_-_31960735_31960765	0.0353182	SOX2.p2	CR624754|EHMT2|10919|euchromatic histone-lysine N-methyltransferase 2
hg18_v1_chr15_+_38673509_38673525	0.0352485	SOX2.p2	AF173994|CASC5|57082|cancer susceptibility candidate 5	BC043597|CASC5|57082|cancer susceptibility candidate 5
hg18_v1_chr4_+_71261066_71261135	0.0352388	SOX2.p2	AK312075|SMR3A|26952|submaxillary gland androgen regulated protein 3A	NM_012390|SMR3A|26952|submaxillary gland androgen regulated protein 3A	BC140927|SMR3A|26952|submaxillary gland androgen regulated protein 3A	BC144529|SMR3B|10879|submaxillary gland androgen regulated protein 3B
hg18_v1_chr12_+_52132154_52132169	0.0351422	SOX2.p2	BC071942|PCBP2|5094|poly(rC) binding protein 2
hg18_v1_chr15_+_70193652_70193652	0.0350992	SOX2.p2	AK097557|SENP8|123228|SUMO/sentrin specific peptidase family member 8	NM_001166340|SENP8|123228|SUMO/sentrin specific peptidase family member 8
hg18_v1_chr11_-_125586733_125586796	0.0350355	SOX2.p2	CR608864|RPUSD4|84881|RNA pseudouridylate synthase domain containing 4	AK027400|RPUSD4|84881|RNA pseudouridylate synthase domain containing 4	AK308059|RPUSD4|84881|RNA pseudouridylate synthase domain containing 4	AK225320|RPUSD4|84881|RNA pseudouridylate synthase domain containing 4	BC014131|RPUSD4|84881|RNA pseudouridylate synthase domain containing 4	NM_001144827|RPUSD4|84881|RNA pseudouridylate synthase domain containing 4	NM_032795|RPUSD4|84881|RNA pseudouridylate synthase domain containing 4
hg18_v1_chr11_-_77026406_77026519	0.0350109	SOX2.p2	AF026003|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	BT019907|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	AF005422|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	CR604322|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	BC119634|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	BC119635|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	CR605039|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	CR617856|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	U53454|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	AK315259|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	X91788|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	NM_001293|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A
hg18_v1_chr5_+_140844810_140844927	0.0349706	SOX2.p2	BC042650|PCDHGC4|56098|protocadherin gamma subfamily C, 4	AF152338|PCDHGC4|56098|protocadherin gamma subfamily C, 4	AF152525|PCDHGC4|56098|protocadherin gamma subfamily C, 4	BC101035|PCDHGC4|56098|protocadherin gamma subfamily C, 4	BC101038|PCDHGC4|56098|protocadherin gamma subfamily C, 4	NM_018928|PCDHGC4|56098|protocadherin gamma subfamily C, 4	NM_032406|PCDHGC4|56098|protocadherin gamma subfamily C, 4	BC101036|PCDHGC4|56098|protocadherin gamma subfamily C, 4
hg18_v1_chr1_+_53253161_53253201	0.0349349	SOX2.p2	M55421|SCP2|6342|sterol carrier protein 2	NM_001007099|SCP2|6342|sterol carrier protein 2	NM_001007100|SCP2|6342|sterol carrier protein 2	NM_001007250|SCP2|6342|sterol carrier protein 2	S52450|SCP2|6342|sterol carrier protein 2
hg18_v1_chr1_-_226671205_226671211	0.0349207	SOX2.p2	NM_001024940|TRIM17|51127|tripartite motif containing 17	NM_001134855|TRIM17|51127|tripartite motif containing 17	NM_016102|TRIM17|51127|tripartite motif containing 17
hg18_v1_chr4_-_185632610_185632740	0.0348544	SOX2.p2	X15949|IRF2|3660|interferon regulatory factor 2	AK312953|IRF2|3660|interferon regulatory factor 2	NM_002199|IRF2|3660|interferon regulatory factor 2
hg18_v1_chr14_+_66725862_66725930	0.03484	SOX2.p2	NM_173526|FAM71D|161142|family with sequence similarity 71, member D	AK093449|FAM71D|161142|family with sequence similarity 71, member D	AK302154|FAM71D|161142|family with sequence similarity 71, member D	BC037380|FAM71D|161142|family with sequence similarity 71, member D	BC050401|FAM71D|161142|family with sequence similarity 71, member D
hg18_v1_chr6_+_152053323_152053425	0.0347789	SOX2.p2	NM_001122742|ESR1|2099|estrogen receptor 1	U68068|ESR1|2099|estrogen receptor 1	AK309580|ESR1|2099|estrogen receptor 1
hg18_v1_chrX_-_131181141_131181224	0.0347239	SOX2.p2	BC035382|RAP2C|57826|RAP2C, member of RAS oncogene family	AK310997|RAP2C|57826|RAP2C, member of RAS oncogene family
hg18_v1_chr7_+_12217343_12217558	0.0346984	SOX2.p2	NM_001134232|TMEM106B|54664|transmembrane protein 106B	NM_018374|TMEM106B|54664|transmembrane protein 106B	AK311651|TMEM106B|54664|transmembrane protein 106B	AK002135|TMEM106B|54664|transmembrane protein 106B	BC033901|TMEM106B|54664|transmembrane protein 106B	BC028108|TMEM106B|54664|transmembrane protein 106B	CR624005|TMEM106B|54664|transmembrane protein 106B	BC039741|TMEM106B|54664|transmembrane protein 106B	AK223263|TMEM106B|54664|transmembrane protein 106B
hg18_v1_chr13_-_47775797_47775823	0.0346789	SOX2.p2	
hg18_v1_chr18_-_51406841_51406859	0.0346659	SOX2.p2	AK122765|TCF4|6925|transcription factor 4	NM_001083962|TCF4|6925|transcription factor 4	NM_003199|TCF4|6925|transcription factor 4
hg18_v1_chr8_-_145136125_145136202	0.0346487	SOX2.p2	BC035485|PARP10|84875|poly (ADP-ribose) polymerase family, member 10
hg18_v1_chr2_+_24660849_24660913	0.0346279	SOX2.p2	NM_003743|NCOA1|8648|nuclear receptor coactivator 1	NM_147223|NCOA1|8648|nuclear receptor coactivator 1	NM_147233|NCOA1|8648|nuclear receptor coactivator 1	AJ000881|NCOA1|8648|nuclear receptor coactivator 1	AJ000882|NCOA1|8648|nuclear receptor coactivator 1	U59302|NCOA1|8648|nuclear receptor coactivator 1
hg18_v1_chr10_+_101282679_101282727	0.0345967	SOX2.p2	NM_145285|NKX2-3|159296|NK2 transcription factor related, locus 3 (Drosophila)	BC025788|NKX2-3|159296|NK2 transcription factor related, locus 3 (Drosophila)	AK313485|NKX2-3|159296|NK2 transcription factor related, locus 3 (Drosophila)	AK300856|NKX2-3|159296|NK2 transcription factor related, locus 3 (Drosophila)
hg18_v1_chr5_+_70232245_70232433	0.0344503	SOX2.p2	NM_021967|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	NM_022968|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC021174|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	NM_001178087|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	NM_022978|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	AF073519|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	AF073518|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC035932|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	CR626737|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC093880|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC171749|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC101970|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC103687|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC104738|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC143260|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC093882|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC143255|SERF1B|728492|small EDRK-rich factor 1B (centromeric)
hg18_v1_chr6_-_31938530_31938571	0.0344302	SOX2.p2	BT007206|NEU1|4758|sialidase 1 (lysosomal sialidase)	CR456717|NEU1|4758|sialidase 1 (lysosomal sialidase)	CR541916|NEU1|4758|sialidase 1 (lysosomal sialidase)	DQ890716|NEU1|4758|sialidase 1 (lysosomal sialidase)	DQ892186|NEU1|4758|sialidase 1 (lysosomal sialidase)	DQ893896|NEU1|4758|sialidase 1 (lysosomal sialidase)	DQ895380|NEU1|4758|sialidase 1 (lysosomal sialidase)	AB209011|NEU1|4758|sialidase 1 (lysosomal sialidase)	CR615934|NEU1|4758|sialidase 1 (lysosomal sialidase)	CR598233|NEU1|4758|sialidase 1 (lysosomal sialidase)	BC011900|NEU1|4758|sialidase 1 (lysosomal sialidase)	CR597671|NEU1|4758|sialidase 1 (lysosomal sialidase)	CR599956|NEU1|4758|sialidase 1 (lysosomal sialidase)	CR607381|NEU1|4758|sialidase 1 (lysosomal sialidase)	CR610236|NEU1|4758|sialidase 1 (lysosomal sialidase)	CR613270|NEU1|4758|sialidase 1 (lysosomal sialidase)	CR626617|NEU1|4758|sialidase 1 (lysosomal sialidase)	CR610204|NEU1|4758|sialidase 1 (lysosomal sialidase)	CR617168|NEU1|4758|sialidase 1 (lysosomal sialidase)	CR621134|NEU1|4758|sialidase 1 (lysosomal sialidase)	CR616447|NEU1|4758|sialidase 1 (lysosomal sialidase)	CR604418|NEU1|4758|sialidase 1 (lysosomal sialidase)	U84246|NEU1|4758|sialidase 1 (lysosomal sialidase)
hg18_v1_chr5_+_86599982_86600036	0.0344026	SOX2.p2	
hg18_v1_chr3_+_159310543_159310627	0.0343501	SOX2.p2	AK290334|RSRC1|51319|arginine/serine-rich coiled-coil 1	BC006982|RSRC1|51319|arginine/serine-rich coiled-coil 1	NM_016625|RSRC1|51319|arginine/serine-rich coiled-coil 1	AF208853|RSRC1|51319|arginine/serine-rich coiled-coil 1	BC010357|RSRC1|51319|arginine/serine-rich coiled-coil 1
hg18_v1_chr8_+_11697680_11697700	0.0343023	SOX2.p2	CR602686|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	BC003573|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	BC009251|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR605887|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR598732|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR610871|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR622798|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	S76822|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR602602|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR595075|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1
hg18_v1_chr19_-_9908014_9908235	0.0342934	SOX2.p2	DQ891083|OLFM2|93145|olfactomedin 2	DQ894265|OLFM2|93145|olfactomedin 2	AF131839|OLFM2|93145|olfactomedin 2	BC011361|OLFM2|93145|olfactomedin 2	NM_058164|OLFM2|93145|olfactomedin 2	CR604836|OLFM2|93145|olfactomedin 2	CR597123|OLFM2|93145|olfactomedin 2	CR592581|OLFM2|93145|olfactomedin 2	CR612883|OLFM2|93145|olfactomedin 2
hg18_v1_chr17_+_26183074_26183148	0.0342605	SOX2.p2	AL832103|ATAD5|79915|ATPase family, AAA domain containing 5	BC015051|ATAD5|79915|ATPase family, AAA domain containing 5	AJ314648|ATAD5|79915|ATPase family, AAA domain containing 5	AY557611|ATAD5|79915|ATPase family, AAA domain containing 5	NM_024857|ATAD5|79915|ATPase family, AAA domain containing 5
hg18_v1_chr7_+_116289765_116289821	0.0342578	SOX2.p2	NM_006136|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	CR615735|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2
hg18_v1_chr10_+_22674379_22674546	0.0342448	SOX2.p2	CR591720|SPAG6|9576|sperm associated antigen 6	AK302194|SPAG6|9576|sperm associated antigen 6	NM_012443|SPAG6|9576|sperm associated antigen 6	NM_172242|SPAG6|9576|sperm associated antigen 6	AF079363|SPAG6|9576|sperm associated antigen 6	AK310247|SPAG6|9576|sperm associated antigen 6	AK289903|SPAG6|9576|sperm associated antigen 6	AL080136|SPAG6|9576|sperm associated antigen 6	BC030585|SPAG6|9576|sperm associated antigen 6	AM392674|SPAG6|9576|sperm associated antigen 6	AM392698|SPAG6|9576|sperm associated antigen 6	DQ890916|SPAG6|9576|sperm associated antigen 6	DQ894067|SPAG6|9576|sperm associated antigen 6	CR533552|SPAG6|9576|sperm associated antigen 6
hg18_v1_chr14_-_87529212_87529221	0.0341684	SOX2.p2	DQ891232|GALC|2581|galactosylceramidase	DQ894416|GALC|2581|galactosylceramidase	BC036518|GALC|2581|galactosylceramidase
hg18_v1_chr12_+_68265469_68265519	0.034138	SOX2.p2	NM_006431|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	AK290767|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	BC113514|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	BC113516|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	AK297685|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	CR616195|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	CR599514|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	CR606401|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	CR615034|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	AF026166|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	CR618455|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	CR621324|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)
hg18_v1_chr2_+_127130209_127130315	0.0341222	SOX2.p2	CR600006|GYPC|2995|glycophorin C (Gerbich blood group)	CR622291|GYPC|2995|glycophorin C (Gerbich blood group)	CR600264|GYPC|2995|glycophorin C (Gerbich blood group)	CR614686|GYPC|2995|glycophorin C (Gerbich blood group)	BC016653|GYPC|2995|glycophorin C (Gerbich blood group)	M11802|GYPC|2995|glycophorin C (Gerbich blood group)	M36284|GYPC|2995|glycophorin C (Gerbich blood group)	X51973|GYPC|2995|glycophorin C (Gerbich blood group)	M28335|GYPC|2995|glycophorin C (Gerbich blood group)
hg18_v1_chr10_+_28862429_28862444	0.0341198	SOX2.p2	NM_016628|WAC|51322|WW domain containing adaptor with coiled-coil	NM_100486|WAC|51322|WW domain containing adaptor with coiled-coil	AK290174|WAC|51322|WW domain containing adaptor with coiled-coil	AK223600|WAC|51322|WW domain containing adaptor with coiled-coil	BC004258|WAC|51322|WW domain containing adaptor with coiled-coil
hg18_v1_chr17_+_73511843_73511912	0.0340343	SOX2.p2	BC039479|TNRC6C|57690|trinucleotide repeat containing 6C	NM_001142640|TNRC6C|57690|trinucleotide repeat containing 6C	NM_018996|TNRC6C|57690|trinucleotide repeat containing 6C
hg18_v1_chr15_-_47042932_47042932	0.0339794	SOX2.p2	BC033907|SHC4|399694|SHC (Src homology 2 domain containing) family, member 4	NM_203349|SHC4|399694|SHC (Src homology 2 domain containing) family, member 4
hg18_v1_chr15_-_91078307_91078479	0.0339782	SOX2.p2	BC110328|FAM174B|400451|family with sequence similarity 174, member B
hg18_v1_chr3_+_153469206_153469405	0.0339524	SOX2.p2	CR603447|MBNL1|4154|muscleblind-like (Drosophila)
hg18_v1_chr1_-_210654696_210654857	0.0338623	SOX2.p2	AK295224|TMEM206|55248|transmembrane protein 206	CR457268|TMEM206|55248|transmembrane protein 206	BC006320|TMEM206|55248|transmembrane protein 206
hg18_v1_chrX_-_39921525_39921525	0.0338392	SOX2.p2	BC114220|BCOR|54880|BCL6 corepressor	NM_001123383|BCOR|54880|BCL6 corepressor	NM_001123384|BCOR|54880|BCL6 corepressor
hg18_v1_chr19_-_17432724_17432762	0.0338254	SOX2.p2	BC014127|NXNL1|115861|nucleoredoxin-like 1	NM_138454|NXNL1|115861|nucleoredoxin-like 1	DQ426894|NXNL1|115861|nucleoredoxin-like 1
hg18_v1_chr1_-_156800017_156800017	0.0338244	SOX2.p2	NM_001160325|OR6P1|128366|olfactory receptor, family 6, subfamily P, member 1
hg18_v1_chr7_+_2565137_2565170	0.0337515	SOX2.p2	BC071858|IQCE|23288|IQ motif containing E	NM_001100390|IQCE|23288|IQ motif containing E	NM_152558|IQCE|23288|IQ motif containing E
hg18_v1_chr6_+_151228577_151228651	0.0337099	SOX2.p2	BC136685|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	BC144368|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	BC144369|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	AB127387|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like
hg18_v1_chr1_-_43692134_43692246	0.0337091	SOX2.p2	AK096244|HYI|81888|hydroxypyruvate isomerase (putative)	AY037165|HYI|81888|hydroxypyruvate isomerase (putative)	AY775560|HYI|81888|hydroxypyruvate isomerase (putative)	NM_001190880|HYI|81888|hydroxypyruvate isomerase (putative)	NM_031207|HYI|81888|hydroxypyruvate isomerase (putative)
hg18_v1_chr9_+_129066576_129066681	0.0335095	SOX2.p2	NM_032293|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3	AK293732|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3	AK095679|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3
hg18_v1_chr1_+_153445113_153445211	0.0334403	SOX2.p2	NM_002455|MTX1|4580|metaxin 1	NM_198883|MTX1|4580|metaxin 1	AK313863|MTX1|4580|metaxin 1	BC001906|MTX1|4580|metaxin 1
hg18_v1_chr21_-_39642712_39642807	0.0334033	SOX2.p2	BT007337|HMGN1|3150|high-mobility group nucleosome binding domain 1	DQ891741|HMGN1|3150|high-mobility group nucleosome binding domain 1	DQ894919|HMGN1|3150|high-mobility group nucleosome binding domain 1	CR620500|HMGN1|3150|high-mobility group nucleosome binding domain 1	CR601793|HMGN1|3150|high-mobility group nucleosome binding domain 1
hg18_v1_chr1_+_53697659_53697732	0.0333051	SOX2.p2	AK057273|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1	NM_033067|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1	AJ291671|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1
hg18_v1_chr11_-_6148131_6148213	0.033268	SOX2.p2	NM_001004052|OR52B2|255725|olfactory receptor, family 52, subfamily B, member 2	BC136732|OR52B2|255725|olfactory receptor, family 52, subfamily B, member 2	BC136733|OR52B2|255725|olfactory receptor, family 52, subfamily B, member 2
hg18_v1_chr15_-_32289480_32289554	0.0332563	SOX2.p2	BC026234|C15orf29|79768|chromosome 15 open reading frame 29	AL136908|C15orf29|79768|chromosome 15 open reading frame 29	AK293021|C15orf29|79768|chromosome 15 open reading frame 29	BC111000|C15orf29|79768|chromosome 15 open reading frame 29	AK297904|C15orf29|79768|chromosome 15 open reading frame 29	CR596194|C15orf29|79768|chromosome 15 open reading frame 29
hg18_v1_chrX_+_46977208_46977305	0.0332105	SOX2.p2	BC140849|USP11|8237|ubiquitin specific peptidase 11	NM_004651|USP11|8237|ubiquitin specific peptidase 11
hg18_v1_chr12_+_47009029_47009081	0.0330553	SOX2.p2	AY302593|H1FNT|341567|H1 histone family, member N, testis-specific	NM_181788|H1FNT|341567|H1 histone family, member N, testis-specific	BC119787|H1FNT|341567|H1 histone family, member N, testis-specific	BC118635|H1FNT|341567|H1 histone family, member N, testis-specific
hg18_v1_chr12_-_10497195_10497245	0.0330341	SOX2.p2	X54867|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1	X54868|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1	AF461812|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1	NM_002259|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1	NM_007328|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1
hg18_v1_chr2_-_98713862_98713994	0.0329945	SOX2.p2	AK314024|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A
hg18_v1_chr11_-_118166797_118166889	0.0329615	SOX2.p2	BC065007|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6	AK313244|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
hg18_v1_chr11_-_56951132_56951159	0.0329571	SOX2.p2	BC003163|SLC43A3|29015|solute carrier family 43, member 3
hg18_v1_chr16_-_47873183_47873287	0.0329234	SOX2.p2	M58583|CBLN1|869|cerebellin 1 precursor	AK314276|CBLN1|869|cerebellin 1 precursor	NM_004352|CBLN1|869|cerebellin 1 precursor
hg18_v1_chr9_+_124836666_124836666	0.0329045	SOX2.p2	BC066885|GPR21|2844|G protein-coupled receptor 21	BC066886|GPR21|2844|G protein-coupled receptor 21	BC067532|GPR21|2844|G protein-coupled receptor 21	BC067533|GPR21|2844|G protein-coupled receptor 21	BC067534|GPR21|2844|G protein-coupled receptor 21	NM_005294|GPR21|2844|G protein-coupled receptor 21
hg18_v1_chr14_+_68727946_68727967	0.032885	SOX2.p2	NM_001193360|EXD2|55218|exonuclease 3'-5' domain containing 2	NM_001193361|EXD2|55218|exonuclease 3'-5' domain containing 2	NM_018199|EXD2|55218|exonuclease 3'-5' domain containing 2
hg18_v1_chr6_+_43846735_43846961	0.0328218	SOX2.p2	M27281|VEGFA|7422|vascular endothelial growth factor A	M32977|VEGFA|7422|vascular endothelial growth factor A	AY047581|VEGFA|7422|vascular endothelial growth factor A	X62568|VEGFA|7422|vascular endothelial growth factor A	EU832814|VEGFA|7422|vascular endothelial growth factor A	GQ129408|VEGFA|7422|vascular endothelial growth factor A	AB021221|VEGFA|7422|vascular endothelial growth factor A	AB451322|VEGFA|7422|vascular endothelial growth factor A	AB451451|VEGFA|7422|vascular endothelial growth factor A	AF091352|VEGFA|7422|vascular endothelial growth factor A	AF214570|VEGFA|7422|vascular endothelial growth factor A	AF430806|VEGFA|7422|vascular endothelial growth factor A	AF486837|VEGFA|7422|vascular endothelial growth factor A	AJ010438|VEGFA|7422|vascular endothelial growth factor A	AY263145|VEGFA|7422|vascular endothelial growth factor A	AY500353|VEGFA|7422|vascular endothelial growth factor A	AY766116|VEGFA|7422|vascular endothelial growth factor A	DQ229900|VEGFA|7422|vascular endothelial growth factor A
hg18_v1_chr3_+_23822481_23822531	0.0328101	SOX2.p2	CR622042|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1 (UBC4/5 homolog, yeast)
hg18_v1_chr5_+_133735004_133735187	0.0327988	SOX2.p2	CR604876|UBE2B|7320|ubiquitin-conjugating enzyme E2B (RAD6 homolog)	BC008404|UBE2B|7320|ubiquitin-conjugating enzyme E2B (RAD6 homolog)	BC008470|UBE2B|7320|ubiquitin-conjugating enzyme E2B (RAD6 homolog)	AK312012|UBE2B|7320|ubiquitin-conjugating enzyme E2B (RAD6 homolog)	CR616089|UBE2B|7320|ubiquitin-conjugating enzyme E2B (RAD6 homolog)	X53251|UBE2B|7320|ubiquitin-conjugating enzyme E2B (RAD6 homolog)	BC005979|UBE2B|7320|ubiquitin-conjugating enzyme E2B (RAD6 homolog)	CR625304|UBE2B|7320|ubiquitin-conjugating enzyme E2B (RAD6 homolog)	DQ893113|UBE2B|7320|ubiquitin-conjugating enzyme E2B (RAD6 homolog)	DQ896387|UBE2B|7320|ubiquitin-conjugating enzyme E2B (RAD6 homolog)	BT007071|UBE2B|7320|ubiquitin-conjugating enzyme E2B (RAD6 homolog)	CR407634|UBE2B|7320|ubiquitin-conjugating enzyme E2B (RAD6 homolog)
hg18_v1_chr2_-_47986160_47986435	0.0327938	SOX2.p2	BC130445|FBXO11|80204|F-box protein 11	BC136480|FBXO11|80204|F-box protein 11	AK292877|FBXO11|80204|F-box protein 11	AF176706|FBXO11|80204|F-box protein 11	AF174599|FBXO11|80204|F-box protein 11	AK223592|FBXO11|80204|F-box protein 11	BC043258|FBXO11|80204|F-box protein 11	AY827075|FBXO11|80204|F-box protein 11	AK297444|FBXO11|80204|F-box protein 11	NM_001190274|FBXO11|80204|F-box protein 11
hg18_v1_chrX_+_48253007_48253152	0.0327835	SOX2.p2	AK316378|PORCN|64840|porcupine homolog (Drosophila)	NM_203474|PORCN|64840|porcupine homolog (Drosophila)	NM_203475|PORCN|64840|porcupine homolog (Drosophila)	AF317058|PORCN|64840|porcupine homolog (Drosophila)	AF317059|PORCN|64840|porcupine homolog (Drosophila)	AF317060|PORCN|64840|porcupine homolog (Drosophila)	AF317061|PORCN|64840|porcupine homolog (Drosophila)	DQ892632|PORCN|64840|porcupine homolog (Drosophila)	DQ895869|PORCN|64840|porcupine homolog (Drosophila)
hg18_v1_chr19_-_49500966_49501043	0.0327567	SOX2.p2	AK315242|ZNF235|9310|zinc finger protein 235	BC105807|ZNF235|9310|zinc finger protein 235	BC143484|ZNF235|9310|zinc finger protein 235	BC117215|ZNF235|9310|zinc finger protein 235	BC143482|ZNF235|9310|zinc finger protein 235	AF027513|ZNF235|9310|zinc finger protein 235	AK307103|ZNF235|9310|zinc finger protein 235	AK300317|ZNF235|9310|zinc finger protein 235	NM_004234|ZNF235|9310|zinc finger protein 235
hg18_v1_chr8_-_102872614_102872614	0.0327543	SOX2.p2	NM_032041|NCALD|83988|neurocalcin delta
hg18_v1_chr9_+_124321239_124321241	0.032704	SOX2.p2	NM_001004452|OR1J4|26219|olfactory receptor, family 1, subfamily J, member 4	BC131606|OR1J4|26219|olfactory receptor, family 1, subfamily J, member 4
hg18_v1_chr3_-_187138342_187138468	0.0327039	SOX2.p2	DQ890937|TRA2B|6434|transformer 2 beta homolog (Drosophila)	EU176532|TRA2B|6434|transformer 2 beta homolog (Drosophila)	CR603112|TRA2B|6434|transformer 2 beta homolog (Drosophila)	U61267|TRA2B|6434|transformer 2 beta homolog (Drosophila)	CR590258|TRA2B|6434|transformer 2 beta homolog (Drosophila)	CR608950|TRA2B|6434|transformer 2 beta homolog (Drosophila)	U68063|TRA2B|6434|transformer 2 beta homolog (Drosophila)	AK301118|TRA2B|6434|transformer 2 beta homolog (Drosophila)	BC005898|TRA2B|6434|transformer 2 beta homolog (Drosophila)
hg18_v1_chr6_-_49789204_49789257	0.0327036	SOX2.p2	AK223337|CRISP2|7180|cysteine-rich secretory protein 2	M25532|CRISP2|7180|cysteine-rich secretory protein 2	BC022011|CRISP2|7180|cysteine-rich secretory protein 2	BC107707|CRISP2|7180|cysteine-rich secretory protein 2	X95239|CRISP2|7180|cysteine-rich secretory protein 2	AY289796|CRISP2|7180|cysteine-rich secretory protein 2	AY292863|CRISP2|7180|cysteine-rich secretory protein 2	AY773479|CRISP2|7180|cysteine-rich secretory protein 2	AK292385|CRISP2|7180|cysteine-rich secretory protein 2	AY292862|CRISP2|7180|cysteine-rich secretory protein 2	NM_001142407|CRISP2|7180|cysteine-rich secretory protein 2	NM_001142408|CRISP2|7180|cysteine-rich secretory protein 2	NM_001142417|CRISP2|7180|cysteine-rich secretory protein 2	NM_001142435|CRISP2|7180|cysteine-rich secretory protein 2	NM_003296|CRISP2|7180|cysteine-rich secretory protein 2
hg18_v1_chr6_+_43097352_43097379	0.0326907	SOX2.p2	AK313816|RRP36|88745|ribosomal RNA processing 36 homolog (S. cerevisiae)	BC006293|RRP36|88745|ribosomal RNA processing 36 homolog (S. cerevisiae)	BC011933|RRP36|88745|ribosomal RNA processing 36 homolog (S. cerevisiae)	NM_033112|RRP36|88745|ribosomal RNA processing 36 homolog (S. cerevisiae)
hg18_v1_chr13_-_102517196_102517196	0.0325835	SOX2.p2	NM_000452|SLC10A2|6555|solute carrier family 10 (sodium/bile acid cotransporter family), member 2	U10417|SLC10A2|6555|solute carrier family 10 (sodium/bile acid cotransporter family), member 2
hg18_v1_chr6_+_36318922_36318957	0.0325801	SOX2.p2	AK096074|PNPLA1|285848|patatin-like phospholipase domain containing 1	NM_173676|PNPLA1|285848|patatin-like phospholipase domain containing 1	BC103905|PNPLA1|285848|patatin-like phospholipase domain containing 1	BC103906|PNPLA1|285848|patatin-like phospholipase domain containing 1	BC103907|PNPLA1|285848|patatin-like phospholipase domain containing 1	NM_001145716|PNPLA1|285848|patatin-like phospholipase domain containing 1
hg18_v1_chr2_+_214984705_214984705	0.0325666	SOX2.p2	BC146903|VWC2L|402117|von Willebrand factor C domain containing protein 2-like	BC146911|VWC2L|402117|von Willebrand factor C domain containing protein 2-like	BC146931|VWC2L|402117|von Willebrand factor C domain containing protein 2-like	BC146935|VWC2L|402117|von Willebrand factor C domain containing protein 2-like	BC171841|VWC2L|402117|von Willebrand factor C domain containing protein 2-like	NM_001080500|VWC2L|402117|von Willebrand factor C domain containing protein 2-like
hg18_v1_chr14_+_76717835_76717855	0.0325465	SOX2.p2	NM_020431|TMEM63C|57156|transmembrane protein 63C
hg18_v1_chr6_-_83832139_83832316	0.032539	SOX2.p2	CR590287|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	BC101512|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	BC101538|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	BC143617|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	CR604323|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	BC036049|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	CR598717|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	AB126062|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	NM_198920|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	BC053645|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	AK298205|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	BC057845|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein
hg18_v1_chr6_+_88021644_88021755	0.0325318	SOX2.p2	AL832366|ZNF292|23036|zinc finger protein 292
hg18_v1_chr1_+_172683834_172683872	0.0324635	SOX2.p2	BC095532|GPR52|9293|G protein-coupled receptor 52	NM_005684|GPR52|9293|G protein-coupled receptor 52	BC067456|GPR52|9293|G protein-coupled receptor 52	BC067457|GPR52|9293|G protein-coupled receptor 52	BC067458|GPR52|9293|G protein-coupled receptor 52	BC067459|GPR52|9293|G protein-coupled receptor 52	BC067460|GPR52|9293|G protein-coupled receptor 52	BC069460|GPR52|9293|G protein-coupled receptor 52
hg18_v1_chr16_-_1772572_1772576	0.0324596	SOX2.p2	AK057850|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3
hg18_v1_chr19_+_59705824_59705946	0.0324391	SOX2.p2	NM_002288|LAIR2|3904|leukocyte-associated immunoglobulin-like receptor 2	NM_021270|LAIR2|3904|leukocyte-associated immunoglobulin-like receptor 2	BC057790|LAIR2|3904|leukocyte-associated immunoglobulin-like receptor 2	AF013250|LAIR2|3904|leukocyte-associated immunoglobulin-like receptor 2	BC069366|LAIR2|3904|leukocyte-associated immunoglobulin-like receptor 2	EF174570|LAIR2|3904|leukocyte-associated immunoglobulin-like receptor 2
hg18_v1_chr19_+_7608010_7608014	0.0324097	SOX2.p2	BC002869|STXBP2|6813|syntaxin binding protein 2
hg18_v1_chr5_-_133775419_133775488	0.0324038	SOX2.p2	CR604625|CDKN2AIPNL|91368|CDKN2A interacting protein N-terminal like	CR612735|CDKN2AIPNL|91368|CDKN2A interacting protein N-terminal like	CR591520|CDKN2AIPNL|91368|CDKN2A interacting protein N-terminal like	CR602620|CDKN2AIPNL|91368|CDKN2A interacting protein N-terminal like	BC018086|CDKN2AIPNL|91368|CDKN2A interacting protein N-terminal like	BC008293|CDKN2AIPNL|91368|CDKN2A interacting protein N-terminal like
hg18_v1_chr19_+_62836322_62836433	0.0323676	SOX2.p2	NM_006385|ZNF211|10520|zinc finger protein 211	NM_198855|ZNF211|10520|zinc finger protein 211	AK294869|ZNF211|10520|zinc finger protein 211	BC018138|ZNF211|10520|zinc finger protein 211	AK296942|ZNF211|10520|zinc finger protein 211	AK297047|ZNF211|10520|zinc finger protein 211	AK304666|ZNF211|10520|zinc finger protein 211	BC110856|ZNF211|10520|zinc finger protein 211	CR596216|ZNF211|10520|zinc finger protein 211	BC034351|ZNF211|10520|zinc finger protein 211	AK026941|ZNF211|10520|zinc finger protein 211
hg18_v1_chr1_-_20985734_20985745	0.0323628	SOX2.p2	AK291252|HP1BP3|50809|heterochromatin protein 1, binding protein 3
hg18_v1_chr19_-_6718417_6718598	0.0323524	SOX2.p2	AK225386|SH2D3A|10045|SH2 domain containing 3A	AK292781|SH2D3A|10045|SH2 domain containing 3A	AK299406|SH2D3A|10045|SH2 domain containing 3A	AK310659|SH2D3A|10045|SH2 domain containing 3A	BC006281|SH2D3A|10045|SH2 domain containing 3A	AF124249|SH2D3A|10045|SH2 domain containing 3A	AY358406|SH2D3A|10045|SH2 domain containing 3A	NM_005490|SH2D3A|10045|SH2 domain containing 3A	AK290293|SH2D3A|10045|SH2 domain containing 3A
hg18_v1_chr7_-_99537362_99537502	0.0323474	SOX2.p2	NM_005916|MCM7|4176|minichromosome maintenance complex component 7
hg18_v1_chr13_+_47775901_47775944	0.0323318	SOX2.p2	L41870|RB1|5925|retinoblastoma 1	M15400|RB1|5925|retinoblastoma 1	M19701|RB1|5925|retinoblastoma 1	M28419|RB1|5925|retinoblastoma 1
hg18_v1_chr16_+_87164158_87164309	0.0323092	SOX2.p2	NM_144604|ZC3H18|124245|zinc finger CCCH-type containing 18
hg18_v1_chr6_+_43319199_43319214	0.0322576	SOX2.p2	NM_032538|TTBK1|84630|tau tubulin kinase 1
hg18_v1_chr2_+_161981138_161981167	0.0322389	SOX2.p2	U49250|TBR1|10716|T-box, brain, 1
hg18_v1_chr5_+_172415891_172416089	0.0322151	SOX2.p2	BX647768|C5orf41|153222|chromosome 5 open reading frame 41	NM_001168393|C5orf41|153222|chromosome 5 open reading frame 41	NM_001168394|C5orf41|153222|chromosome 5 open reading frame 41	NM_153607|C5orf41|153222|chromosome 5 open reading frame 41	AK300043|C5orf41|153222|chromosome 5 open reading frame 41	AY139008|C5orf41|153222|chromosome 5 open reading frame 41	BC041709|C5orf41|153222|chromosome 5 open reading frame 41	AY174896|C5orf41|153222|chromosome 5 open reading frame 41	AK124117|C5orf41|153222|chromosome 5 open reading frame 41	BX647573|C5orf41|153222|chromosome 5 open reading frame 41	AK291677|C5orf41|153222|chromosome 5 open reading frame 41
hg18_v1_chr1_-_241485105_241485285	0.0321873	SOX2.p2	AK310003|CEP170|9859|centrosomal protein 170kDa	BC050722|CEP170|9859|centrosomal protein 170kDa
hg18_v1_chr12_+_99185334_99185679	0.0321545	SOX2.p2	AK292980|SCYL2|55681|SCY1-like 2 (S. cerevisiae)	BC063798|SCYL2|55681|SCY1-like 2 (S. cerevisiae)	NM_017988|SCYL2|55681|SCY1-like 2 (S. cerevisiae)
hg18_v1_chr1_-_20985747_20985771	0.0321038	SOX2.p2	AK023129|HP1BP3|50809|heterochromatin protein 1, binding protein 3	NM_016287|HP1BP3|50809|heterochromatin protein 1, binding protein 3
hg18_v1_chr3_+_52788976_52788981	0.032076	SOX2.p2	AK303156|ITIH1|3697|inter-alpha (globulin) inhibitor H1	NM_001166435|ITIH1|3697|inter-alpha (globulin) inhibitor H1	NM_001166436|ITIH1|3697|inter-alpha (globulin) inhibitor H1	AK303110|ITIH1|3697|inter-alpha (globulin) inhibitor H1
hg18_v1_chr11_-_56951088_56951127	0.0320376	SOX2.p2	AK311394|SLC43A3|29015|solute carrier family 43, member 3	NM_014096|SLC43A3|29015|solute carrier family 43, member 3
hg18_v1_chr9_-_97309301_97309301	0.0320353	SOX2.p2	AB189440|PTCH1|5727|patched 1	NM_001083607|PTCH1|5727|patched 1
hg18_v1_chr5_+_72179685_72179709	0.0319673	SOX2.p2	NM_153188|TNPO1|3842|transportin 1
hg18_v1_chr8_+_39890484_39890598	0.0319664	SOX2.p2	NM_002164|IDO1|3620|indoleamine 2,3-dioxygenase 1	AK313259|IDO1|3620|indoleamine 2,3-dioxygenase 1	CR614485|IDO1|3620|indoleamine 2,3-dioxygenase 1	BC027882|IDO1|3620|indoleamine 2,3-dioxygenase 1	X17668|IDO1|3620|indoleamine 2,3-dioxygenase 1	CR613807|IDO1|3620|indoleamine 2,3-dioxygenase 1	CR616634|IDO1|3620|indoleamine 2,3-dioxygenase 1	CR621546|IDO1|3620|indoleamine 2,3-dioxygenase 1	CR591703|IDO1|3620|indoleamine 2,3-dioxygenase 1	AY221100|IDO1|3620|indoleamine 2,3-dioxygenase 1
hg18_v1_chr12_-_43556220_43556268	0.0319631	SOX2.p2	BC020544|NELL2|4753|NEL-like 2 (chicken)
hg18_v1_chr12_+_48765300_48765461	0.0318876	SOX2.p2	AK292700|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	AK293932|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	AK130517|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	EU447009|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	BC000063|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	AF109733|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
hg18_v1_chrX_+_152608159_152608159	0.0318797	SOX2.p2	AK295495|SLC6A8|6535|solute carrier family 6 (neurotransmitter transporter, creatine), member 8	NM_001142806|SLC6A8|6535|solute carrier family 6 (neurotransmitter transporter, creatine), member 8
hg18_v1_chrX_-_13745234_13745239	0.0318494	SOX2.p2	NM_001001995|GPM6B|2824|glycoprotein M6B	NM_001001996|GPM6B|2824|glycoprotein M6B	NM_005278|GPM6B|2824|glycoprotein M6B
hg18_v1_chrX_-_63362227_63362288	0.0317863	SOX2.p2	AF403030|ASB12|142689|ankyrin repeat and SOCS box containing 12	BC069436|ASB12|142689|ankyrin repeat and SOCS box containing 12	BC069555|ASB12|142689|ankyrin repeat and SOCS box containing 12	NM_130388|ASB12|142689|ankyrin repeat and SOCS box containing 12	BC093883|ASB12|142689|ankyrin repeat and SOCS box containing 12	BC104946|ASB12|142689|ankyrin repeat and SOCS box containing 12
hg18_v1_chr14_-_105589467_105589979	0.031669	SOX2.p2	BC041037|IGHM|3507|immunoglobulin heavy constant mu	BC018747|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	BC062335|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)	BC064496|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	AK097345|IGHA1|3493|immunoglobulin heavy constant alpha 1	AK123975|LOC100126583|100126583|hypothetical LOC100126583	BX640822|LOC100126583|100126583|hypothetical LOC100126583
hg18_v1_chr11_+_116608447_116608839	0.0316359	SOX2.p2	NM_207343|RNF214|257160|ring finger protein 214	AK298923|RNF214|257160|ring finger protein 214	BC064581|RNF214|257160|ring finger protein 214	AK300160|RNF214|257160|ring finger protein 214	BC146891|RNF214|257160|ring finger protein 214	BC146901|RNF214|257160|ring finger protein 214	NM_001077239|RNF214|257160|ring finger protein 214
hg18_v1_chr14_+_90650220_90650311	0.0315713	SOX2.p2	AK023200|C14orf159|80017|chromosome 14 open reading frame 159
hg18_v1_chr1_+_178867744_178867777	0.031549	SOX2.p2	BC028576|XPR1|9213|xenotropic and polytropic retrovirus receptor 1	NM_001135669|XPR1|9213|xenotropic and polytropic retrovirus receptor 1	NM_004736|XPR1|9213|xenotropic and polytropic retrovirus receptor 1
hg18_v1_chr11_+_440346_440396	0.0315445	SOX2.p2	AK311723|PTDSS2|81490|phosphatidylserine synthase 2	AL834357|PTDSS2|81490|phosphatidylserine synthase 2
hg18_v1_chr1_-_226670928_226671080	0.0314599	SOX2.p2	AF156271|TRIM17|51127|tripartite motif containing 17	AK316379|TRIM17|51127|tripartite motif containing 17	BC023999|TRIM17|51127|tripartite motif containing 17	BC033788|TRIM17|51127|tripartite motif containing 17	AK301105|TRIM17|51127|tripartite motif containing 17	AK308774|TRIM17|51127|tripartite motif containing 17
hg18_v1_chr4_+_57469122_57469266	0.0314558	SOX2.p2	BC132859|REST|5978|RE1-silencing transcription factor	BC136491|REST|5978|RE1-silencing transcription factor
hg18_v1_chr12_-_55686466_55686571	0.0314525	SOX2.p2	BC140890|ZBTB39|9880|zinc finger and BTB domain containing 39	BC146867|ZBTB39|9880|zinc finger and BTB domain containing 39	AB002350|ZBTB39|9880|zinc finger and BTB domain containing 39	BC152461|ZBTB39|9880|zinc finger and BTB domain containing 39	AK292468|ZBTB39|9880|zinc finger and BTB domain containing 39	NM_014830|ZBTB39|9880|zinc finger and BTB domain containing 39
hg18_v1_chr8_+_7789608_7789621	0.0314281	SOX2.p2	BC069285|DEFB4A|1673|defensin, beta 4A	NM_004942|DEFB4A|1673|defensin, beta 4A	BC093985|DEFB4A|1673|defensin, beta 4A	BC093983|DEFB4A|1673|defensin, beta 4A	Z71389|DEFB4A|1673|defensin, beta 4A
hg18_v1_chr19_+_7608020_7608035	0.0313758	SOX2.p2	AB002559|STXBP2|6813|syntaxin binding protein 2	U63533|STXBP2|6813|syntaxin binding protein 2	CR611383|STXBP2|6813|syntaxin binding protein 2	AK302257|STXBP2|6813|syntaxin binding protein 2	CR620863|STXBP2|6813|syntaxin binding protein 2	BT006915|STXBP2|6813|syntaxin binding protein 2
hg18_v1_chr8_-_7710547_7710647	0.0313512	SOX2.p2	AF540979|DEFB107A|245910|defensin, beta 107A	AY122467|DEFB107A|245910|defensin, beta 107A	BC137510|DEFB107A|245910|defensin, beta 107A	BC137513|DEFB107A|245910|defensin, beta 107A	DQ119826|DEFB107A|245910|defensin, beta 107A	NM_001037668|DEFB107A|245910|defensin, beta 107A	NM_001040705|DEFB107B|503614|defensin, beta 107B
hg18_v1_chr11_-_10835941_10836248	0.0313461	SOX2.p2	AK123233|ZBED5|58486|zinc finger, BED-type containing 5	AK315033|ZBED5|58486|zinc finger, BED-type containing 5	BC047754|ZBED5|58486|zinc finger, BED-type containing 5	AF205600|ZBED5|58486|zinc finger, BED-type containing 5	BC017803|ZBED5|58486|zinc finger, BED-type containing 5	BC038508|ZBED5|58486|zinc finger, BED-type containing 5	NM_001143667|ZBED5|58486|zinc finger, BED-type containing 5	NM_021211|ZBED5|58486|zinc finger, BED-type containing 5
hg18_v1_chr14_+_96333434_96333503	0.031346	SOX2.p2	NM_003384|VRK1|7443|vaccinia related kinase 1	AK290110|VRK1|7443|vaccinia related kinase 1	BC103761|VRK1|7443|vaccinia related kinase 1	AB000449|VRK1|7443|vaccinia related kinase 1	BC112075|VRK1|7443|vaccinia related kinase 1	BC113510|VRK1|7443|vaccinia related kinase 1	CR608451|VRK1|7443|vaccinia related kinase 1	BC005970|VRK1|7443|vaccinia related kinase 1
hg18_v1_chr17_+_71772875_71772884	0.0313251	SOX2.p2	BC060859|FAM100B|283991|family with sequence similarity 100, member B	NM_182565|FAM100B|283991|family with sequence similarity 100, member B
hg18_v1_chr21_-_29179482_29179586	0.0312402	SOX2.p2	CR612892|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)	CR620576|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)	BC011554|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)	AK314100|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)	AK225515|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)	AF139682|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)	NM_013240|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)	NM_182749|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)
hg18_v1_chr1_-_203985963_203985994	0.031229	SOX2.p2	NM_022731|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1
hg18_v1_chr1_-_247086686_247086776	0.031198	SOX2.p2	AY358453|SH3BP5L|80851|SH3-binding domain protein 5-like	CR613756|SH3BP5L|80851|SH3-binding domain protein 5-like	AK056382|SH3BP5L|80851|SH3-binding domain protein 5-like	NM_030645|SH3BP5L|80851|SH3-binding domain protein 5-like
hg18_v1_chr10_-_63698463_63698627	0.0311417	SOX2.p2	AY150309|RTKN2|219790|rhotekin 2	BC025765|RTKN2|219790|rhotekin 2	NM_145307|RTKN2|219790|rhotekin 2	BC141821|RTKN2|219790|rhotekin 2	BC142725|RTKN2|219790|rhotekin 2
hg18_v1_chr7_-_156495314_156495440	0.0310904	SOX2.p2	X56537|MNX1|3110|motor neuron and pancreas homeobox 1
hg18_v1_chr11_+_17289030_17289089	0.0310526	SOX2.p2	
hg18_v1_chrX_-_148604506_148604506	0.0309382	SOX2.p2	AK127849|MAGEA11|4110|melanoma antigen family A, 11	NM_001011544|MAGEA11|4110|melanoma antigen family A, 11
hg18_v1_chr3_+_159310631_159310638	0.0309283	SOX2.p2	AK300388|RSRC1|51319|arginine/serine-rich coiled-coil 1
hg18_v1_chr7_-_149651594_149651690	0.0309185	SOX2.p2	BX640643|ACTR3C|653857|ARP3 actin-related protein 3 homolog C (yeast)	NM_001164458|ACTR3C|653857|ARP3 actin-related protein 3 homolog C (yeast)
hg18_v1_chr5_-_138238877_138238886	0.0309057	SOX2.p2	CR600503|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2
hg18_v1_chr9_+_114671635_114671738	0.0308551	SOX2.p2	AK129991|SNX30|401548|sorting nexin family member 30
hg18_v1_chrX_+_16578201_16578235	0.0308164	SOX2.p2	L13220|S100G|795|S100 calcium binding protein G	NM_004057|S100G|795|S100 calcium binding protein G	X65869|S100G|795|S100 calcium binding protein G	BC112174|S100G|795|S100 calcium binding protein G
hg18_v1_chr4_-_54625528_54625581	0.0308111	SOX2.p2	AK312427|CHIC2|26511|cysteine-rich hydrophobic domain 2	NM_012110|CHIC2|26511|cysteine-rich hydrophobic domain 2	CR611915|CHIC2|26511|cysteine-rich hydrophobic domain 2
hg18_v1_chr11_-_85053807_85053874	0.0307903	SOX2.p2	BC060807|CREBZF|58487|CREB/ATF bZIP transcription factor	NM_001039618|CREBZF|58487|CREB/ATF bZIP transcription factor
hg18_v1_chr9_+_136912474_136912488	0.0307801	SOX2.p2	AK290843|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)	BC069572|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)	BC069825|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)	BC113935|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)	D49353|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)	NM_004108|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)	NM_015837|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)	AK308476|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)
hg18_v1_chr12_-_11399776_11399791	0.0307166	SOX2.p2	BC044827|PRB1|5542|proline-rich protein BstNI subfamily 1	K03205|PRB1|5542|proline-rich protein BstNI subfamily 1	K03206|PRB1|5542|proline-rich protein BstNI subfamily 1	BC141917|PRB1|5542|proline-rich protein BstNI subfamily 1	K03204|PRB1|5542|proline-rich protein BstNI subfamily 1	NM_005039|PRB1|5542|proline-rich protein BstNI subfamily 1	NM_199353|PRB1|5542|proline-rich protein BstNI subfamily 1	NM_199354|PRB1|5542|proline-rich protein BstNI subfamily 1
hg18_v1_chr15_-_54175954_54176025	0.0305999	SOX2.p2	AL832584|RFX7|64864|regulatory factor X, 7
hg18_v1_chr10_+_69314347_69314480	0.0305766	SOX2.p2	AF083106|SIRT1|23411|sirtuin 1	NM_012238|SIRT1|23411|sirtuin 1	AF235040|SIRT1|23411|sirtuin 1
hg18_v1_chr11_+_440408_440473	0.0305679	SOX2.p2	DQ891743|PTDSS2|81490|phosphatidylserine synthase 2	DQ894922|PTDSS2|81490|phosphatidylserine synthase 2
hg18_v1_chr19_-_18578467_18578574	0.0305678	SOX2.p2	EU832355|CRLF1|9244|cytokine receptor-like factor 1	EU832440|CRLF1|9244|cytokine receptor-like factor 1	AF178684|CRLF1|9244|cytokine receptor-like factor 1
hg18_v1_chr13_-_109757442_109757578	0.0305592	SOX2.p2	BC142626|COL4A1|1282|collagen, type IV, alpha 1	BC151220|COL4A1|1282|collagen, type IV, alpha 1	AB209646|COL4A1|1282|collagen, type IV, alpha 1	CR593711|COL4A1|1282|collagen, type IV, alpha 1	NM_001845|COL4A1|1282|collagen, type IV, alpha 1	X05561|COL4A1|1282|collagen, type IV, alpha 1
hg18_v1_chr18_+_53862888_53862921	0.0304515	SOX2.p2	DQ890913|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	DQ893350|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	AY312514|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like
hg18_v1_chr11_+_65027721_65028452	0.0304372	SOX2.p2	
hg18_v1_chr22_+_18485145_18485170	0.0303859	SOX2.p2	CU013156|RANBP1|5902|RAN binding protein 1	CU013444|RANBP1|5902|RAN binding protein 1
hg18_v1_chr1_+_50348052_50348199	0.0303623	SOX2.p2	AK298817|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	AK309653|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
hg18_v1_chr8_-_125649926_125649958	0.0303593	SOX2.p2	AF116674|MTSS1|9788|metastasis suppressor 1
hg18_v1_chr9_+_101717278_101717284	0.0303589	SOX2.p2	BC101564|STX17|55014|syntaxin 17	BC101566|STX17|55014|syntaxin 17	BC143430|STX17|55014|syntaxin 17
hg18_v1_chr8_-_86441115_86441194	0.0302669	SOX2.p2	DQ890930|CA1|759|carbonic anhydrase I	DQ894091|CA1|759|carbonic anhydrase I	X05014|CA1|759|carbonic anhydrase I	NM_001164830|CA1|759|carbonic anhydrase I
hg18_v1_chr14_-_59264044_59264183	0.0302563	SOX2.p2	DQ355431|RTN1|6252|reticulon 1	L10334|RTN1|6252|reticulon 1	NM_206857|RTN1|6252|reticulon 1
hg18_v1_chr4_+_144654526_144654603	0.0302106	SOX2.p2	
hg18_v1_chr6_-_11490487_11490566	0.0302071	SOX2.p2	BX648041|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9	AK292682|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9	NM_001142393|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9
hg18_v1_chr20_-_35586366_35586366	0.0302068	SOX2.p2	NM_001167823|BLCAP|10904|bladder cancer associated protein
hg18_v1_chr11_+_111666133_111666228	0.0301974	SOX2.p2	
hg18_v1_chr3_+_173954940_173955053	0.0300992	SOX2.p2	BC112086|ECT2|1894|epithelial cell transforming sequence 2 oncogene	AK023267|ECT2|1894|epithelial cell transforming sequence 2 oncogene	NM_018098|ECT2|1894|epithelial cell transforming sequence 2 oncogene	DQ847274|ECT2|1894|epithelial cell transforming sequence 2 oncogene
hg18_v1_chr11_+_63510876_63510903	0.0300667	SOX2.p2	AK307413|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1
hg18_v1_chr2_+_27293737_27293779	0.0300445	SOX2.p2	BC065510|CAD|790|carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase	NM_004341|CAD|790|carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase	AK226105|CAD|790|carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase
hg18_v1_chr18_+_31074985_31075104	0.0299729	SOX2.p2	NM_001135178|ZNF397|84307|zinc finger protein 397	NM_032347|ZNF397|84307|zinc finger protein 397	AF533250|ZNF397|84307|zinc finger protein 397	AY157641|ZNF397|84307|zinc finger protein 397	AK311533|ZNF397|84307|zinc finger protein 397	CR624700|ZNF397|84307|zinc finger protein 397	CR624709|ZNF397|84307|zinc finger protein 397	AK027384|ZNF397|84307|zinc finger protein 397	BC006172|ZNF397|84307|zinc finger protein 397	CR623021|ZNF397|84307|zinc finger protein 397
hg18_v1_chr17_-_24302450_24302462	0.0299637	SOX2.p2	BC110882|PHF12|57649|PHD finger protein 12
hg18_v1_chr10_-_99084254_99084320	0.029945	SOX2.p2	BT009770|FRAT2|23401|frequently rearranged in advanced T-cell lymphomas 2	DQ895557|FRAT2|23401|frequently rearranged in advanced T-cell lymphomas 2
hg18_v1_chr4_+_78298326_78298709	0.0298896	SOX2.p2	L49506|CCNG2|901|cyclin G2	AK293899|CCNG2|901|cyclin G2	BT019503|CCNG2|901|cyclin G2	CR542181|CCNG2|901|cyclin G2	CR542200|CCNG2|901|cyclin G2	DQ890836|CCNG2|901|cyclin G2	DQ893991|CCNG2|901|cyclin G2
hg18_v1_chr16_+_87164342_87164398	0.0298885	SOX2.p2	BC050463|ZC3H18|124245|zinc finger CCCH-type containing 18
hg18_v1_chrX_+_122145776_122146067	0.0298666	SOX2.p2	NM_000828|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3	NM_007325|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3	BC032004|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3	BC117464|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3	U10301|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3	U10302|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3
hg18_v1_chr15_+_38673734_38673778	0.0298378	SOX2.p2	AB022190|CASC5|57082|cancer susceptibility candidate 5	BC014306|CASC5|57082|cancer susceptibility candidate 5	NM_144508|CASC5|57082|cancer susceptibility candidate 5	NM_170589|CASC5|57082|cancer susceptibility candidate 5	AK307605|CASC5|57082|cancer susceptibility candidate 5	AK307996|CASC5|57082|cancer susceptibility candidate 5	AF248041|CASC5|57082|cancer susceptibility candidate 5	AF461041|CASC5|57082|cancer susceptibility candidate 5	BC029373|CASC5|57082|cancer susceptibility candidate 5
hg18_v1_chr1_+_221633337_221633440	0.0297925	SOX2.p2	NM_152610|C1orf65|164127|chromosome 1 open reading frame 65	AK093047|C1orf65|164127|chromosome 1 open reading frame 65	BC031066|C1orf65|164127|chromosome 1 open reading frame 65	BC030026|C1orf65|164127|chromosome 1 open reading frame 65
hg18_v1_chr15_-_42790805_42790871	0.0297051	SOX2.p2	
hg18_v1_chr2_+_181553613_181553650	0.0296944	SOX2.p2	BC092407|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)	CR616134|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)
hg18_v1_chr4_+_91035025_91035145	0.0296606	SOX2.p2	AK125557|MMRN1|22915|multimerin 1	AK313566|MMRN1|22915|multimerin 1	BC063848|MMRN1|22915|multimerin 1	NM_007351|MMRN1|22915|multimerin 1	U27109|MMRN1|22915|multimerin 1
hg18_v1_chr4_-_76817313_76817368	0.0296598	SOX2.p2	AB014560|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2	AK291786|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2	NM_012297|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2
hg18_v1_chr19_+_38263625_38263625	0.029632	SOX2.p2	BC006108|GPATCH1|55094|G patch domain containing 1	NM_018025|GPATCH1|55094|G patch domain containing 1
hg18_v1_chr1_-_152847301_152847347	0.0295942	SOX2.p2	AK304153|ADAR|103|adenosine deaminase, RNA-specific	X79449|ADAR|103|adenosine deaminase, RNA-specific	NM_001111|ADAR|103|adenosine deaminase, RNA-specific	NM_015840|ADAR|103|adenosine deaminase, RNA-specific	NM_015841|ADAR|103|adenosine deaminase, RNA-specific
hg18_v1_chr4_+_86968069_86968088	0.0295886	SOX2.p2	AK307423|ARHGAP24|83478|Rho GTPase activating protein 24
hg18_v1_chr12_-_43556424_43556513	0.02955	SOX2.p2	NM_001145108|NELL2|4753|NEL-like 2 (chicken)	NM_006159|NELL2|4753|NEL-like 2 (chicken)
hg18_v1_chr3_-_186454509_186454579	0.0295167	SOX2.p2	BC038948|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase	BC110460|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase	L07077|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase	AK301521|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase	AK223460|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase	AK291798|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase	BC011030|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase	BC030982|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase	NM_001166415|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase	NM_001966|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase
hg18_v1_chr2_+_54638957_54639182	0.0294812	SOX2.p2	AF327441|SPTBN1|6711|spectrin, beta, non-erythrocytic 1	NM_178313|SPTBN1|6711|spectrin, beta, non-erythrocytic 1	BC137282|SPTBN1|6711|spectrin, beta, non-erythrocytic 1	BC137283|SPTBN1|6711|spectrin, beta, non-erythrocytic 1
hg18_v1_chr4_-_5940893_5940901	0.0294791	SOX2.p2	BT006806|CRMP1|1400|collapsin response mediator protein 1	DQ892528|CRMP1|1400|collapsin response mediator protein 1	DQ895740|CRMP1|1400|collapsin response mediator protein 1
hg18_v1_chr6_-_33493640_33493687	0.0294744	SOX2.p2	CR620346|CUTA|51596|cutA divalent cation tolerance homolog (E. coli)	BC005890|CUTA|51596|cutA divalent cation tolerance homolog (E. coli)	AF106943|CUTA|51596|cutA divalent cation tolerance homolog (E. coli)	BC107751|CUTA|51596|cutA divalent cation tolerance homolog (E. coli)	CR597845|CUTA|51596|cutA divalent cation tolerance homolog (E. coli)
hg18_v1_chr9_+_115678365_115678476	0.0294489	SOX2.p2	BC036039|ZNF618|114991|zinc finger protein 618	NM_133374|ZNF618|114991|zinc finger protein 618	BC136287|ZNF618|114991|zinc finger protein 618	BC143826|ZNF618|114991|zinc finger protein 618	AK126896|ZNF618|114991|zinc finger protein 618	BC053892|ZNF618|114991|zinc finger protein 618
hg18_v1_chr8_-_52884456_52884557	0.0294422	SOX2.p2	EU170240|PXDNL|137902|peroxidasin homolog (Drosophila)-like	AY877349|PXDNL|137902|peroxidasin homolog (Drosophila)-like	NM_144651|PXDNL|137902|peroxidasin homolog (Drosophila)-like
hg18_v1_chr7_-_23476156_23476253	0.0294275	SOX2.p2	
hg18_v1_chrX_+_41191630_41191656	0.029419	SOX2.p2	AJ278865|NYX|60506|nyctalopin	AF254868|NYX|60506|nyctalopin	NM_022567|NYX|60506|nyctalopin
hg18_v1_chr20_+_43470330_43470344	0.0294157	SOX2.p2	CR610357|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2
hg18_v1_chr2_+_190723216_190723216	0.0293717	SOX2.p2	NM_001042520|C2orf88|84281|chromosome 2 open reading frame 88
hg18_v1_chr6_+_157141565_157141570	0.0293599	SOX2.p2	AF253515|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)
hg18_v1_chr1_-_13204251_13204278	0.0293473	SOX2.p2	NM_001100631|PRAMEF22|653606|PRAME family member 22	NM_001013692|PRAMEF3|401940|PRAME family member 3
hg18_v1_chr7_-_139825693_139825785	0.029316	SOX2.p2	CR605455|MKRN1|23608|makorin ring finger protein 1	AF192784|MKRN1|23608|makorin ring finger protein 1	AL136812|MKRN1|23608|makorin ring finger protein 1	CR625460|MKRN1|23608|makorin ring finger protein 1	AF117233|MKRN1|23608|makorin ring finger protein 1	BC025955|MKRN1|23608|makorin ring finger protein 1
hg18_v1_chr5_+_36912595_36912648	0.0293085	SOX2.p2	NM_015384|NIPBL|25836|Nipped-B homolog (Drosophila)	NM_133433|NIPBL|25836|Nipped-B homolog (Drosophila)	AJ627032|NIPBL|25836|Nipped-B homolog (Drosophila)	AJ640137|NIPBL|25836|Nipped-B homolog (Drosophila)
hg18_v1_chr10_-_5035967_5036093	0.0292965	SOX2.p2	M33376|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	S68290|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)	AB021654|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	AB031084|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	BT006653|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	DQ890680|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	DQ893862|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	S68330|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	BC007024|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	U05598|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	AK296419|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	AK308385|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	AK296686|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	NM_001135241|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	AK290304|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	AB209017|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)
hg18_v1_chr19_-_16544188_16544205	0.029267	SOX2.p2	BC062562|SLC35E1|79939|solute carrier family 35, member E1	NM_024881|SLC35E1|79939|solute carrier family 35, member E1
hg18_v1_chrX_+_135407336_135407509	0.0292666	SOX2.p2	BC009896|HTATSF1|27336|HIV-1 Tat specific factor 1	NM_014500|HTATSF1|27336|HIV-1 Tat specific factor 1	AK299403|HTATSF1|27336|HIV-1 Tat specific factor 1	AK225870|HTATSF1|27336|HIV-1 Tat specific factor 1	U76992|HTATSF1|27336|HIV-1 Tat specific factor 1	EU176345|HTATSF1|27336|HIV-1 Tat specific factor 1	BT006886|HTATSF1|27336|HIV-1 Tat specific factor 1
hg18_v1_chr9_+_6710862_6710862	0.0292534	SOX2.p2	AK310439|KDM4C|23081|lysine (K)-specific demethylase 4C	NM_001146696|KDM4C|23081|lysine (K)-specific demethylase 4C
hg18_v1_chr8_-_18585721_18585904	0.0291796	SOX2.p2	EU832144|PSD3|23362|pleckstrin and Sec7 domain containing 3	EU832237|PSD3|23362|pleckstrin and Sec7 domain containing 3	AK296546|PSD3|23362|pleckstrin and Sec7 domain containing 3	BX647320|PSD3|23362|pleckstrin and Sec7 domain containing 3	BX647406|PSD3|23362|pleckstrin and Sec7 domain containing 3
hg18_v1_chr19_-_55124764_55124866	0.0291565	SOX2.p2	NM_016553|NUP62|23636|nucleoporin 62kDa
hg18_v1_chr11_+_82460766_82460767	0.0291213	SOX2.p2	BC031316|LOC100506233|100506233|hypothetical LOC100506233
hg18_v1_chr7_+_2565172_2565191	0.0291043	SOX2.p2	AK302053|IQCE|23288|IQ motif containing E
hg18_v1_chrX_-_139694248_139694388	0.0290792	SOX2.p2	M16965|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa	BC113472|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa	BC113474|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa	NM_004065|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa
hg18_v1_chr12_-_12310969_12311250	0.0290784	SOX2.p2	BC117136|LRP6|4040|low density lipoprotein receptor-related protein 6	BC126405|LRP6|4040|low density lipoprotein receptor-related protein 6	BC143725|LRP6|4040|low density lipoprotein receptor-related protein 6	AF074264|LRP6|4040|low density lipoprotein receptor-related protein 6	NM_002336|LRP6|4040|low density lipoprotein receptor-related protein 6
hg18_v1_chr2_+_169021039_169021204	0.0290174	SOX2.p2	NM_203463|LASS6|253782|LAG1 homolog, ceramide synthase 6	BC109284|LASS6|253782|LAG1 homolog, ceramide synthase 6	BC109285|LASS6|253782|LAG1 homolog, ceramide synthase 6
hg18_v1_chr1_-_24179419_24179539	0.0290087	SOX2.p2	AK222994|SRSF10|10772|serine/arginine-rich splicing factor 10	AK296175|SRSF10|10772|serine/arginine-rich splicing factor 10	BC001107|SRSF10|10772|serine/arginine-rich splicing factor 10	NM_001191005|SRSF10|10772|serine/arginine-rich splicing factor 10	NM_001191006|SRSF10|10772|serine/arginine-rich splicing factor 10	NM_001191007|SRSF10|10772|serine/arginine-rich splicing factor 10	NM_001191009|SRSF10|10772|serine/arginine-rich splicing factor 10	NM_006625|SRSF10|10772|serine/arginine-rich splicing factor 10	NM_054016|SRSF10|10772|serine/arginine-rich splicing factor 10
hg18_v1_chr2_+_169465995_169466046	0.0288698	SOX2.p2	BC104778|G6PC2|57818|glucose-6-phosphatase, catalytic, 2	BC113376|G6PC2|57818|glucose-6-phosphatase, catalytic, 2	NM_001081686|G6PC2|57818|glucose-6-phosphatase, catalytic, 2	NM_021176|G6PC2|57818|glucose-6-phosphatase, catalytic, 2	CR627438|G6PC2|57818|glucose-6-phosphatase, catalytic, 2
hg18_v1_chr5_+_137701855_137701909	0.0287674	SOX2.p2	BC000259|FAM53C|51307|family with sequence similarity 53, member C	AF251040|FAM53C|51307|family with sequence similarity 53, member C
hg18_v1_chr7_-_76667045_76667100	0.0286354	SOX2.p2	GQ129349|FGL2|10875|fibrinogen-like 2	GQ129350|FGL2|10875|fibrinogen-like 2	AK222999|FGL2|10875|fibrinogen-like 2	AK312672|FGL2|10875|fibrinogen-like 2	BC073986|FGL2|10875|fibrinogen-like 2	BC017813|FGL2|10875|fibrinogen-like 2	BC033820|FGL2|10875|fibrinogen-like 2	CR610336|FGL2|10875|fibrinogen-like 2	Z36531|FGL2|10875|fibrinogen-like 2	NM_006682|FGL2|10875|fibrinogen-like 2
hg18_v1_chr1_+_112099703_112099781	0.0286084	SOX2.p2	NM_007204|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20	BC034953|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20	AF171063|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20
hg18_v1_chr4_-_24195274_24195275	0.0285942	SOX2.p2	AB001636|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15
hg18_v1_chr3_+_134239860_134239894	0.0285738	SOX2.p2	NM_001136469|TMEM108|66000|transmembrane protein 108	NM_023943|TMEM108|66000|transmembrane protein 108
hg18_v1_chr3_-_188339882_188340018	0.028559	SOX2.p2	L05096|RPL39L|116832|ribosomal protein L39-like	AB063610|RPL39L|116832|ribosomal protein L39-like	BC012328|RPL39L|116832|ribosomal protein L39-like	NM_052969|RPL39L|116832|ribosomal protein L39-like	CR603001|RPL39L|116832|ribosomal protein L39-like
hg18_v1_chr6_+_4721825_4722015	0.0284335	SOX2.p2	BC119682|CDYL|9425|chromodomain protein, Y-like
hg18_v1_chr8_+_98725670_98725908	0.0284078	SOX2.p2	BC022825|MTDH|92140|metadherin	BC009324|MTDH|92140|metadherin	AF411226|MTDH|92140|metadherin	CR606229|MTDH|92140|metadherin	AY082966|MTDH|92140|metadherin	AY974040|MTDH|92140|metadherin
hg18_v1_chr6_+_151228383_151228544	0.0283916	SOX2.p2	NM_015440|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	AY374130|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	AY374131|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like
hg18_v1_chr4_-_120462705_120462763	0.0283526	SOX2.p2	AK025079|FABP2|2169|fatty acid binding protein 2, intestinal	BC069617|FABP2|2169|fatty acid binding protein 2, intestinal	BC069466|FABP2|2169|fatty acid binding protein 2, intestinal	BC069625|FABP2|2169|fatty acid binding protein 2, intestinal	BC069637|FABP2|2169|fatty acid binding protein 2, intestinal	BC111791|FABP2|2169|fatty acid binding protein 2, intestinal	NM_000134|FABP2|2169|fatty acid binding protein 2, intestinal
hg18_v1_chr5_+_140605330_140605330	0.0283339	SOX2.p2	AF152494|PCDHB15|56121|protocadherin beta 15	AF217742|PCDHB15|56121|protocadherin beta 15	DQ893315|PCDHB15|56121|protocadherin beta 15	DQ896630|PCDHB15|56121|protocadherin beta 15	NM_018935|PCDHB15|56121|protocadherin beta 15
hg18_v1_chr12_+_56462794_56462885	0.0282811	SOX2.p2	NM_001172695|TSFM|10102|Ts translation elongation factor, mitochondrial	NM_001172696|TSFM|10102|Ts translation elongation factor, mitochondrial	NM_001172697|TSFM|10102|Ts translation elongation factor, mitochondrial	NM_005726|TSFM|10102|Ts translation elongation factor, mitochondrial	AK304621|TSFM|10102|Ts translation elongation factor, mitochondrial	AK313453|TSFM|10102|Ts translation elongation factor, mitochondrial	CR592271|TSFM|10102|Ts translation elongation factor, mitochondrial	BC022862|TSFM|10102|Ts translation elongation factor, mitochondrial	AK295323|TSFM|10102|Ts translation elongation factor, mitochondrial	AK308981|TSFM|10102|Ts translation elongation factor, mitochondrial	BC093068|TSFM|10102|Ts translation elongation factor, mitochondrial	AF110399|TSFM|10102|Ts translation elongation factor, mitochondrial	CR622683|TSFM|10102|Ts translation elongation factor, mitochondrial	CR606259|TSFM|10102|Ts translation elongation factor, mitochondrial
hg18_v1_chrX_-_16798383_16798454	0.028275	SOX2.p2	NM_002893|RBBP7|5931|retinoblastoma binding protein 7
hg18_v1_chr1_+_26609893_26609968	0.0282619	SOX2.p2	AF521099|LIN28A|79727|lin-28 homolog A (C. elegans)	AK022519|LIN28A|79727|lin-28 homolog A (C. elegans)	DQ893398|LIN28A|79727|lin-28 homolog A (C. elegans)	DQ896719|LIN28A|79727|lin-28 homolog A (C. elegans)
hg18_v1_chr17_+_26839143_26839230	0.0282372	SOX2.p2	AK097424|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)
hg18_v1_chr19_-_7607852_7607854	0.0282342	SOX2.p2	
hg18_v1_chr19_+_46462113_46462121	0.0281441	SOX2.p2	AK022863|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	AK127057|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	AK291762|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	AK308156|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1
hg18_v1_chr19_-_48791967_48792138	0.028123	SOX2.p2	NM_001007561|IRGQ|126298|immunity-related GTPase family, Q
hg18_v1_chr19_-_57930102_57930118	0.0281218	SOX2.p2	BC028590|ZNF611|81856|zinc finger protein 611	AK091389|ZNF611|81856|zinc finger protein 611	NM_001161501|ZNF611|81856|zinc finger protein 611	NM_001161499|ZNF611|81856|zinc finger protein 611	NM_001161500|ZNF611|81856|zinc finger protein 611
hg18_v1_chr19_+_21116666_21116727	0.0280962	SOX2.p2	BX647597|ZNF431|170959|zinc finger protein 431	AK308127|ZNF431|170959|zinc finger protein 431	NM_133473|ZNF431|170959|zinc finger protein 431	AK293072|ZNF431|170959|zinc finger protein 431	AB075849|ZNF431|170959|zinc finger protein 431	BC040506|ZNF431|170959|zinc finger protein 431
hg18_v1_chr2_-_55131157_55131175	0.0280317	SOX2.p2	AK075039|RTN4|57142|reticulon 4
hg18_v1_chr10_+_4995597_4995645	0.0279598	SOX2.p2	CR611068|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)	AK310658|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)	BC020216|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)	BC015490|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)	M86609|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)	U05684|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)	DQ891484|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)	DQ893923|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)	AB031083|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)	BT007197|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)	DQ269985|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)	S68290|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)
hg18_v1_chr5_-_133775491_133775506	0.0279465	SOX2.p2	NM_080656|CDKN2AIPNL|91368|CDKN2A interacting protein N-terminal like
hg18_v1_chr12_-_121551424_121551519	0.0279401	SOX2.p2	AK027702|ZCCHC8|55596|zinc finger, CCHC domain containing 8	AK074638|ZCCHC8|55596|zinc finger, CCHC domain containing 8	NM_017612|ZCCHC8|55596|zinc finger, CCHC domain containing 8
hg18_v1_chr20_+_17155669_17155674	0.027897	SOX2.p2	BC001905|PCSK2|5126|proprotein convertase subtilisin/kexin type 2
hg18_v1_chr7_+_148523486_148523759	0.0278671	SOX2.p2	D30612|ZNF282|8427|zinc finger protein 282	NM_003575|ZNF282|8427|zinc finger protein 282	AK299280|ZNF282|8427|zinc finger protein 282	BC073805|ZNF282|8427|zinc finger protein 282	AK316282|ZNF282|8427|zinc finger protein 282	BC055287|ZNF282|8427|zinc finger protein 282	BC041704|ZNF282|8427|zinc finger protein 282
hg18_v1_chr1_+_24944554_24944631	0.0278431	SOX2.p2	AF109196|CLIC4|25932|chloride intracellular channel 4	AM393644|CLIC4|25932|chloride intracellular channel 4	CR533501|CLIC4|25932|chloride intracellular channel 4
hg18_v1_chr15_+_74416156_74416278	0.0278368	SOX2.p2	AK001022|ISL2|64843|ISL LIM homeobox 2	BC012136|ISL2|64843|ISL LIM homeobox 2	NM_145805|ISL2|64843|ISL LIM homeobox 2	BC011967|ISL2|64843|ISL LIM homeobox 2	EU446846|ISL2|64843|ISL LIM homeobox 2
hg18_v1_chr11_-_58368555_58368574	0.0278062	SOX2.p2	BC021682|GLYATL2|219970|glycine-N-acyltransferase-like 2	NM_145016|GLYATL2|219970|glycine-N-acyltransferase-like 2	BC016789|GLYATL2|219970|glycine-N-acyltransferase-like 2
hg18_v1_chr14_-_103098326_103098411	0.0277063	SOX2.p2	AK291312|BAG5|9529|BCL2-associated athanogene 5	AK225741|BAG5|9529|BCL2-associated athanogene 5	BC044216|BAG5|9529|BCL2-associated athanogene 5	AF095195|BAG5|9529|BCL2-associated athanogene 5	AK225730|BAG5|9529|BCL2-associated athanogene 5	BC050551|BAG5|9529|BCL2-associated athanogene 5	NM_001015049|BAG5|9529|BCL2-associated athanogene 5	NM_004873|BAG5|9529|BCL2-associated athanogene 5
hg18_v1_chr6_+_29382381_29382445	0.0276872	SOX2.p2	BC136905|OR14J1|442191|olfactory receptor, family 14, subfamily J, member 1	NM_030946|OR14J1|442191|olfactory receptor, family 14, subfamily J, member 1
hg18_v1_chr1_+_178867787_178867795	0.027616	SOX2.p2	BC041142|XPR1|9213|xenotropic and polytropic retrovirus receptor 1	AF089744|XPR1|9213|xenotropic and polytropic retrovirus receptor 1
hg18_v1_chr7_+_56086933_56086955	0.0276038	SOX2.p2	L27706|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	BC106941|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	BC106942|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)
hg18_v1_chr2_-_172458970_172459089	0.0275913	SOX2.p2	DQ891540|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	EU176607|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AK091071|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	BC016932|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AJ496568|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	Y14494|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AK022828|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AK294638|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	NM_003705|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12
hg18_v1_chr19_+_7608015_7608017	0.0274876	SOX2.p2	CR611137|STXBP2|6813|syntaxin binding protein 2	CR597245|STXBP2|6813|syntaxin binding protein 2	CR613567|STXBP2|6813|syntaxin binding protein 2	CR625756|STXBP2|6813|syntaxin binding protein 2	CR626453|STXBP2|6813|syntaxin binding protein 2
hg18_v1_chr2_+_108571177_108571199	0.0274469	SOX2.p2	NM_004987|LIMS1|3987|LIM and senescent cell antigen-like domains 1	U09284|LIMS1|3987|LIM and senescent cell antigen-like domains 1
hg18_v1_chr9_-_124329392_124329392	0.0273787	SOX2.p2	NM_012363|OR1N1|138883|olfactory receptor, family 1, subfamily N, member 1
hg18_v1_chr17_+_34115383_34115450	0.0273755	SOX2.p2	AK310435|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6	AK310437|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6	NM_005937|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6	U07932|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6	AB209633|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6
hg18_v1_chr9_-_139316523_139316559	0.0273552	SOX2.p2	BC053618|NRARP|441478|NOTCH-regulated ankyrin repeat protein	NM_001004354|NRARP|441478|NOTCH-regulated ankyrin repeat protein
hg18_v1_chr12_-_7739591_7739655	0.0273452	SOX2.p2	DQ892661|GDF3|9573|growth differentiation factor 3	DQ895901|GDF3|9573|growth differentiation factor 3	AF110641|GDF3|9573|growth differentiation factor 3	AF263538|GDF3|9573|growth differentiation factor 3	NM_020634|GDF3|9573|growth differentiation factor 3	BC030959|GDF3|9573|growth differentiation factor 3	AY358875|GDF3|9573|growth differentiation factor 3
hg18_v1_chr2_-_86276015_86276101	0.0273367	SOX2.p2	CR456793|IMMT|10989|inner membrane protein, mitochondrial	EU831472|IMMT|10989|inner membrane protein, mitochondrial	EU831559|IMMT|10989|inner membrane protein, mitochondrial	AY232292|IMMT|10989|inner membrane protein, mitochondrial	AK300017|IMMT|10989|inner membrane protein, mitochondrial	BC002412|IMMT|10989|inner membrane protein, mitochondrial	AK296676|IMMT|10989|inner membrane protein, mitochondrial	AY921637|IMMT|10989|inner membrane protein, mitochondrial	AK312251|IMMT|10989|inner membrane protein, mitochondrial	AK299014|IMMT|10989|inner membrane protein, mitochondrial	AK309004|IMMT|10989|inner membrane protein, mitochondrial	CR610445|IMMT|10989|inner membrane protein, mitochondrial	AK225780|IMMT|10989|inner membrane protein, mitochondrial	AK304197|IMMT|10989|inner membrane protein, mitochondrial	BC005983|IMMT|10989|inner membrane protein, mitochondrial	BC107419|IMMT|10989|inner membrane protein, mitochondrial	D21091|IMMT|10989|inner membrane protein, mitochondrial	D21094|IMMT|10989|inner membrane protein, mitochondrial
hg18_v1_chrX_-_32340291_32340291	0.0273072	SOX2.p2	NM_004011|DMD|1756|dystrophin	NM_004012|DMD|1756|dystrophin
hg18_v1_chr8_+_32623792_32623792	0.0272914	SOX2.p2	AK289927|NRG1|3084|neuregulin 1	NM_013959|NRG1|3084|neuregulin 1
hg18_v1_chr6_+_7053863_7053942	0.0272788	SOX2.p2	BX647723|RREB1|6239|ras responsive element binding protein 1
hg18_v1_chr1_-_172059780_172059949	0.0272589	SOX2.p2	CR617320|CENPL|91687|centromere protein L	AK055606|CENPL|91687|centromere protein L	BC019022|CENPL|91687|centromere protein L	NM_001171182|CENPL|91687|centromere protein L	BC007071|CENPL|91687|centromere protein L
hg18_v1_chr9_-_88159143_88159244	0.0271996	SOX2.p2	AL832193|ZCCHC6|79670|zinc finger, CCHC domain containing 6	CR936608|ZCCHC6|79670|zinc finger, CCHC domain containing 6	AK055546|ZCCHC6|79670|zinc finger, CCHC domain containing 6	CR933644|ZCCHC6|79670|zinc finger, CCHC domain containing 6	AL832026|ZCCHC6|79670|zinc finger, CCHC domain containing 6	BX641077|ZCCHC6|79670|zinc finger, CCHC domain containing 6	CR933643|ZCCHC6|79670|zinc finger, CCHC domain containing 6	BC111003|ZCCHC6|79670|zinc finger, CCHC domain containing 6	NM_001185059|ZCCHC6|79670|zinc finger, CCHC domain containing 6	NM_001185074|ZCCHC6|79670|zinc finger, CCHC domain containing 6	NM_024617|ZCCHC6|79670|zinc finger, CCHC domain containing 6
hg18_v1_chr6_+_42639745_42639765	0.0271841	SOX2.p2	BC024217|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2	BC064512|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2
hg18_v1_chr20_+_31268779_31268818	0.0271833	SOX2.p2	BC041904|C20orf71|128861|chromosome 20 open reading frame 71	NM_001042439|C20orf71|128861|chromosome 20 open reading frame 71	NM_178466|C20orf71|128861|chromosome 20 open reading frame 71	BC066354|C20orf71|128861|chromosome 20 open reading frame 71
hg18_v1_chr8_+_145136155_145136217	0.027161	SOX2.p2	NM_000837|GRINA|2907|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)	NM_001009184|GRINA|2907|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)
hg18_v1_chr1_+_87566738_87566752	0.0271126	SOX2.p2	NM_006769|LMO4|8543|LIM domain only 4	U24576|LMO4|8543|LIM domain only 4
hg18_v1_chr1_+_202031425_202031430	0.0270231	SOX2.p2	AK296983|ZC3H11A|9877|zinc finger CCCH-type containing 11A
hg18_v1_chr4_-_77547481_77547481	0.0270187	SOX2.p2	BC035224|CCDC158|339965|coiled-coil domain containing 158	NM_001042784|CCDC158|339965|coiled-coil domain containing 158
hg18_v1_chr6_-_30762957_30762971	0.0269605	SOX2.p2	AB073600|KIAA1949|170954|KIAA1949	BX647622|KIAA1949|170954|KIAA1949
hg18_v1_chr2_-_55131124_55131138	0.0269084	SOX2.p2	BC026788|RTN4|57142|reticulon 4
hg18_v1_chr4_-_77097582_77097589	0.026831	SOX2.p2	AF132198|SDAD1|55153|SDA1 domain containing 1
hg18_v1_chr1_+_157824239_157824335	0.0267476	SOX2.p2	BC007039|APCS|325|amyloid P component, serum	BC007058|APCS|325|amyloid P component, serum	BC070178|APCS|325|amyloid P component, serum	NM_001639|APCS|325|amyloid P component, serum	X04608|APCS|325|amyloid P component, serum	BT006750|APCS|325|amyloid P component, serum	CR450313|APCS|325|amyloid P component, serum	M10944|APCS|325|amyloid P component, serum
hg18_v1_chr16_-_1772577_1772609	0.0267429	SOX2.p2	NM_080861|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3
hg18_v1_chr6_+_87921980_87922037	0.0267222	SOX2.p2	NM_015021|ZNF292|23036|zinc finger protein 292	AK123473|ZNF292|23036|zinc finger protein 292	BX537746|ZNF292|23036|zinc finger protein 292
hg18_v1_chr1_-_154987904_154988027	0.0266674	SOX2.p2	AK298342|HDGF|3068|hepatoma-derived growth factor	AK315514|HDGF|3068|hepatoma-derived growth factor	BC018991|HDGF|3068|hepatoma-derived growth factor
hg18_v1_chr10_+_35455986_35456061	0.0266239	SOX2.p2	CR613240|CREM|1390|cAMP responsive element modulator
hg18_v1_chr4_-_5941043_5941138	0.0266069	SOX2.p2	D78012|CRMP1|1400|collapsin response mediator protein 1	AK127754|CRMP1|1400|collapsin response mediator protein 1	CR608807|CRMP1|1400|collapsin response mediator protein 1	BC000252|CRMP1|1400|collapsin response mediator protein 1	BC007613|CRMP1|1400|collapsin response mediator protein 1	AK309379|CRMP1|1400|collapsin response mediator protein 1
hg18_v1_chr1_+_1157485_1157595	0.0265923	SOX2.p2	NM_080605|B3GALT6|126792|UDP-Gal:betaGal beta 1,3-galactosyltransferase polypeptide 6	BC051719|B3GALT6|126792|UDP-Gal:betaGal beta 1,3-galactosyltransferase polypeptide 6
hg18_v1_chr6_-_52736231_52736319	0.026589	SOX2.p2	AK292602|GSTA2|2939|glutathione S-transferase alpha 2	AK313601|GSTA2|2939|glutathione S-transferase alpha 2	M16594|GSTA2|2939|glutathione S-transferase alpha 2	BC002895|GSTA2|2939|glutathione S-transferase alpha 2	NM_000846|GSTA2|2939|glutathione S-transferase alpha 2
hg18_v1_chr12_+_70366140_70366153	0.0265214	SOX2.p2	BC008596|TMEM19|55266|transmembrane protein 19	NM_018279|TMEM19|55266|transmembrane protein 19
hg18_v1_chr1_+_110683586_110683622	0.026512	SOX2.p2	AK022541|RBM15|64783|RNA binding motif protein 15	BC006397|RBM15|64783|RNA binding motif protein 15	BC062316|RBM15|64783|RNA binding motif protein 15
hg18_v1_chr2_-_106177166_106177187	0.0264444	SOX2.p2	CR592836|UXS1|80146|UDP-glucuronate decarboxylase 1	BC009819|UXS1|80146|UDP-glucuronate decarboxylase 1	AY147934|UXS1|80146|UDP-glucuronate decarboxylase 1	AY358541|UXS1|80146|UDP-glucuronate decarboxylase 1	AK290668|UXS1|80146|UDP-glucuronate decarboxylase 1	AK304872|UXS1|80146|UDP-glucuronate decarboxylase 1
hg18_v1_chr5_+_140730014_140730145	0.0264261	SOX2.p2	BC150172|PCDHGB3|56102|protocadherin gamma subfamily B, 3	AF152332|PCDHGB3|56102|protocadherin gamma subfamily B, 3	AF152519|PCDHGB3|56102|protocadherin gamma subfamily B, 3	NM_018924|PCDHGB3|56102|protocadherin gamma subfamily B, 3	NM_032097|PCDHGB3|56102|protocadherin gamma subfamily B, 3
hg18_v1_chr5_+_140187746_140187860	0.0263818	SOX2.p2	BC036674|PCDHA6|56142|protocadherin alpha 6	AF169694|PCDHA6|56142|protocadherin alpha 6	NM_018909|PCDHA6|56142|protocadherin alpha 6	NM_031848|PCDHA6|56142|protocadherin alpha 6	NM_031849|PCDHA6|56142|protocadherin alpha 6	AF152314|PCDHA6|56142|protocadherin alpha 6	AF152484|PCDHA6|56142|protocadherin alpha 6
hg18_v1_chr1_+_32777358_32777358	0.0263345	SOX2.p2	NM_001040441|ZBTB8A|653121|zinc finger and BTB domain containing 8A
hg18_v1_chr2_-_20375497_20375564	0.0263308	SOX2.p2	AF272350|PUM2|23369|pumilio homolog 2 (Drosophila)
hg18_v1_chr3_-_196751293_196751512	0.026265	SOX2.p2	BC007655|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2	BC066921|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2	NM_006241|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2
hg18_v1_chr6_-_105957669_105957707	0.0262381	SOX2.p2	AK314195|PREP|5550|prolyl endopeptidase	NM_002726|PREP|5550|prolyl endopeptidase
hg18_v1_chr11_-_67198662_67198752	0.0261981	SOX2.p2	AK309277|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2	NM_000695|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2	AK092464|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2
hg18_v1_chr20_+_17155617_17155630	0.025934	SOX2.p2	NM_002594|PCSK2|5126|proprotein convertase subtilisin/kexin type 2
hg18_v1_chr4_+_76868850_76869027	0.0259107	SOX2.p2	D86326|USO1|8615|USO1 vesicle docking protein homolog (yeast)	NM_003715|USO1|8615|USO1 vesicle docking protein homolog (yeast)	BC032654|USO1|8615|USO1 vesicle docking protein homolog (yeast)	AM392946|USO1|8615|USO1 vesicle docking protein homolog (yeast)	AM393489|USO1|8615|USO1 vesicle docking protein homolog (yeast)	DQ894066|USO1|8615|USO1 vesicle docking protein homolog (yeast)	EU176195|USO1|8615|USO1 vesicle docking protein homolog (yeast)
hg18_v1_chr16_-_8870343_8870379	0.0259058	SOX2.p2	BC108283|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa	BC000782|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa	AK093698|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa	AK311777|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa	NM_014316|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa	BC003366|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa
hg18_v1_chr4_+_189153918_189153937	0.02589	SOX2.p2	AK056719|ZFP42|132625|zinc finger protein 42 homolog (mouse)	AY429593|ZFP42|132625|zinc finger protein 42 homolog (mouse)	NM_174900|ZFP42|132625|zinc finger protein 42 homolog (mouse)	CR624529|ZFP42|132625|zinc finger protein 42 homolog (mouse)
hg18_v1_chr12_+_108020305_108020514	0.025856	SOX2.p2	NM_003362|UNG|7374|uracil-DNA glycosylase	CR749342|UNG|7374|uracil-DNA glycosylase	AK299416|UNG|7374|uracil-DNA glycosylase	CR613619|UNG|7374|uracil-DNA glycosylase	AK291341|UNG|7374|uracil-DNA glycosylase	X15653|UNG|7374|uracil-DNA glycosylase	BC050634|UNG|7374|uracil-DNA glycosylase	BC015205|UNG|7374|uracil-DNA glycosylase	CR541673|UNG|7374|uracil-DNA glycosylase	GQ129388|UNG|7374|uracil-DNA glycosylase	GQ129389|UNG|7374|uracil-DNA glycosylase
hg18_v1_chr13_-_24643620_24643701	0.0258351	SOX2.p2	AK098343|FAM123A|219287|family with sequence similarity 123A	BC032653|FAM123A|219287|family with sequence similarity 123A
hg18_v1_chr11_-_14336606_14336648	0.0258341	SOX2.p2	AK309550|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2	AK309683|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2	NM_001177315|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2	NM_001102669|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2
hg18_v1_chr21_+_44890758_44890777	0.025765	SOX2.p2	AB076359|KRTAP10-11|386678|keratin associated protein 10-11	NM_198692|KRTAP10-11|386678|keratin associated protein 10-11	BC131611|KRTAP10-11|386678|keratin associated protein 10-11
hg18_v1_chr12_+_52132151_52132153	0.0256943	SOX2.p2	AB188306|PCBP2|5094|poly(rC) binding protein 2	NM_001098620|PCBP2|5094|poly(rC) binding protein 2	NM_001128911|PCBP2|5094|poly(rC) binding protein 2	NM_001128912|PCBP2|5094|poly(rC) binding protein 2	NM_001128913|PCBP2|5094|poly(rC) binding protein 2	NM_001128914|PCBP2|5094|poly(rC) binding protein 2	NM_005016|PCBP2|5094|poly(rC) binding protein 2	NM_031989|PCBP2|5094|poly(rC) binding protein 2
hg18_v1_chr11_-_33714448_33714600	0.0256616	SOX2.p2	CR608995|CD59|966|CD59 molecule, complement regulatory protein	CR590164|CD59|966|CD59 molecule, complement regulatory protein	CR612934|CD59|966|CD59 molecule, complement regulatory protein	CR596803|CD59|966|CD59 molecule, complement regulatory protein	CR603102|CD59|966|CD59 molecule, complement regulatory protein	CR604104|CD59|966|CD59 molecule, complement regulatory protein	CR615105|CD59|966|CD59 molecule, complement regulatory protein	CR619669|CD59|966|CD59 molecule, complement regulatory protein	CR625449|CD59|966|CD59 molecule, complement regulatory protein	CR625964|CD59|966|CD59 molecule, complement regulatory protein	AK311778|CD59|966|CD59 molecule, complement regulatory protein	X16447|CD59|966|CD59 molecule, complement regulatory protein	CR608941|CD59|966|CD59 molecule, complement regulatory protein	CR613325|CD59|966|CD59 molecule, complement regulatory protein	X17198|CD59|966|CD59 molecule, complement regulatory protein	CR610476|CD59|966|CD59 molecule, complement regulatory protein	CR616585|CD59|966|CD59 molecule, complement regulatory protein	NM_000611|CD59|966|CD59 molecule, complement regulatory protein	NM_203329|CD59|966|CD59 molecule, complement regulatory protein	NM_203330|CD59|966|CD59 molecule, complement regulatory protein	NM_203331|CD59|966|CD59 molecule, complement regulatory protein
hg18_v1_chr4_-_44348414_44348414	0.0255413	SOX2.p2	AK096895|YIPF7|285525|Yip1 domain family, member 7	BC103995|YIPF7|285525|Yip1 domain family, member 7	BC103996|YIPF7|285525|Yip1 domain family, member 7	NM_182592|YIPF7|285525|Yip1 domain family, member 7
hg18_v1_chr10_+_115501202_115501202	0.025532	SOX2.p2	AK128811|C10orf81|79949|chromosome 10 open reading frame 81	NM_001193434|C10orf81|79949|chromosome 10 open reading frame 81	NM_001193435|C10orf81|79949|chromosome 10 open reading frame 81	NM_024889|C10orf81|79949|chromosome 10 open reading frame 81
hg18_v1_chr12_+_105275565_105275636	0.0255249	SOX2.p2	NM_018082|POLR3B|55703|polymerase (RNA) III (DNA directed) polypeptide B	BX537447|POLR3B|55703|polymerase (RNA) III (DNA directed) polypeptide B
hg18_v1_chr19_+_38867273_38867273	0.0255118	SOX2.p2	BC018723|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8	NM_022467|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8
hg18_v1_chr14_+_20283938_20283967	0.0254722	SOX2.p2	NM_006683|EDDM3A|10876|epididymal protein 3A	X76383|EDDM3A|10876|epididymal protein 3A	BC096698|EDDM3A|10876|epididymal protein 3A	BC096731|EDDM3A|10876|epididymal protein 3A	BC069407|EDDM3A|10876|epididymal protein 3A
hg18_v1_chr5_+_72148173_72148320	0.0253493	SOX2.p2	NM_002270|TNPO1|3842|transportin 1	AK299671|TNPO1|3842|transportin 1	U70322|TNPO1|3842|transportin 1	AK301021|TNPO1|3842|transportin 1	AK308177|TNPO1|3842|transportin 1	BC040340|TNPO1|3842|transportin 1
hg18_v1_chr20_-_1395463_1395490	0.0252576	SOX2.p2	CR604875|NSFL1C|55968|NSFL1 (p97) cofactor (p47)	DQ893189|NSFL1C|55968|NSFL1 (p97) cofactor (p47)	DQ896513|NSFL1C|55968|NSFL1 (p97) cofactor (p47)	CR600062|NSFL1C|55968|NSFL1 (p97) cofactor (p47)	AK001511|NSFL1C|55968|NSFL1 (p97) cofactor (p47)	CR605903|NSFL1C|55968|NSFL1 (p97) cofactor (p47)	AF078856|NSFL1C|55968|NSFL1 (p97) cofactor (p47)	AF086909|NSFL1C|55968|NSFL1 (p97) cofactor (p47)	AF112211|NSFL1C|55968|NSFL1 (p97) cofactor (p47)	AK223334|NSFL1C|55968|NSFL1 (p97) cofactor (p47)	AK297403|NSFL1C|55968|NSFL1 (p97) cofactor (p47)	AK315433|NSFL1C|55968|NSFL1 (p97) cofactor (p47)	AF283774|NSFL1C|55968|NSFL1 (p97) cofactor (p47)	AK223341|NSFL1C|55968|NSFL1 (p97) cofactor (p47)
hg18_v1_chr10_-_124595680_124595680	0.0251865	SOX2.p2	AY260047|CUZD1|50624|CUB and zona pellucida-like domains 1	AY260048|CUZD1|50624|CUB and zona pellucida-like domains 1	AY260049|CUZD1|50624|CUB and zona pellucida-like domains 1	AY260050|CUZD1|50624|CUB and zona pellucida-like domains 1	NM_022034|CUZD1|50624|CUB and zona pellucida-like domains 1
hg18_v1_chr1_+_218334041_218334110	0.0251424	SOX2.p2	AY267462|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial	NM_018060|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial	BC137438|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial
hg18_v1_chr1_-_153915867_153915914	0.025132	SOX2.p2	
hg18_v1_chr15_+_62230962_62231027	0.0250923	SOX2.p2	AK126655|SNX22|79856|sorting nexin 22	AK024014|SNX22|79856|sorting nexin 22	NM_024798|SNX22|79856|sorting nexin 22	BC019655|SNX22|79856|sorting nexin 22	BC036532|SNX22|79856|sorting nexin 22	BC014660|SNX22|79856|sorting nexin 22	BC030225|SNX22|79856|sorting nexin 22	AY044653|SNX22|79856|sorting nexin 22
hg18_v1_chr11_+_55335418_55335518	0.0250705	SOX2.p2	BC136939|OR5L1|219437|olfactory receptor, family 5, subfamily L, member 1	BC109249|OR5L1|219437|olfactory receptor, family 5, subfamily L, member 1	BC109250|OR5L1|219437|olfactory receptor, family 5, subfamily L, member 1	NM_001004738|OR5L1|219437|olfactory receptor, family 5, subfamily L, member 1
hg18_v1_chr20_-_55719946_55719946	0.0250577	SOX2.p2	NM_199171|PMEPA1|56937|prostate transmembrane protein, androgen induced 1
hg18_v1_chr17_-_59403932_59404009	0.0249856	SOX2.p2	AY212253|SCN4A|6329|sodium channel, voltage-gated, type IV, alpha subunit	M81758|SCN4A|6329|sodium channel, voltage-gated, type IV, alpha subunit	NM_000334|SCN4A|6329|sodium channel, voltage-gated, type IV, alpha subunit
hg18_v1_chr19_+_1033797_1033809	0.024958	SOX2.p2	CR608309|HMHA1|23526|histocompatibility (minor) HA-1
hg18_v1_chr12_-_45052830_45052911	0.0249566	SOX2.p2	NM_018976|SLC38A2|54407|solute carrier family 38, member 2
hg18_v1_chrX_-_73751135_73751149	0.0249196	SOX2.p2	AF155109|RLIM|51132|ring finger protein, LIM domain interacting	BC013357|RLIM|51132|ring finger protein, LIM domain interacting
hg18_v1_chr3_-_145049853_145050062	0.0248236	SOX2.p2	AB089794|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9	AL832304|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9	AY254100|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9	BC035779|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9	AK315107|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9	AK301816|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9	NM_173653|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9
hg18_v1_chr12_+_54172413_54172413	0.0248088	SOX2.p2	NM_001005519|OR6C68|403284|olfactory receptor, family 6, subfamily C, member 68
hg18_v1_chr2_+_47021866_47021948	0.0247997	SOX2.p2	BC111487|TTC7A|57217|tetratricopeptide repeat domain 7A
hg18_v1_chr17_-_71287417_71287456	0.0247987	SOX2.p2	BC108701|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR595774|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR611244|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR602412|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR604778|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR606388|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR595544|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR603793|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR617433|H3F3B|3021|H3 histone, family 3B (H3.3B)	AF218029|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR602780|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR618082|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR619729|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR621264|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR625366|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR591387|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR603175|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR621009|H3F3B|3021|H3 histone, family 3B (H3.3B)	BC001124|H3F3B|3021|H3 histone, family 3B (H3.3B)	BC006497|H3F3B|3021|H3 histone, family 3B (H3.3B)	BC012813|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR618076|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR624690|H3F3B|3021|H3 histone, family 3B (H3.3B)	BC017558|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR595062|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR597711|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR602581|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR605171|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR610507|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR614120|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR615382|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR616111|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR608885|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR622957|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR599200|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR625547|H3F3B|3021|H3 histone, family 3B (H3.3B)	BX647280|H3F3B|3021|H3 histone, family 3B (H3.3B)	AK130772|H3F3B|3021|H3 histone, family 3B (H3.3B)	AK304607|H3F3B|3021|H3 histone, family 3B (H3.3B)	AK312762|H3F3B|3021|H3 histone, family 3B (H3.3B)	BX537379|H3F3B|3021|H3 histone, family 3B (H3.3B)	NM_005324|H3F3B|3021|H3 histone, family 3B (H3.3B)
hg18_v1_chr7_+_38984133_38984133	0.0247142	SOX2.p2	NM_001166018|POU6F2|11281|POU class 6 homeobox 2	NM_007252|POU6F2|11281|POU class 6 homeobox 2
hg18_v1_chr15_+_48261649_48261916	0.024701	SOX2.p2	AK290262|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2	NM_001159629|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2	NM_003645|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2	AF096290|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2	AK222859|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2	D88308|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2	AK223145|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2	BC057770|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2
hg18_v1_chr15_-_62782470_62782502	0.0246865	SOX2.p2	CR624771|OAZ2|4947|ornithine decarboxylase antizyme 2
hg18_v1_chr2_+_27293846_27293921	0.0246803	SOX2.p2	D78586|CAD|790|carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase
hg18_v1_chr5_+_140719773_140719886	0.0246708	SOX2.p2	BC101805|PCDHGB2|56103|protocadherin gamma subfamily B, 2	AF152331|PCDHGB2|56103|protocadherin gamma subfamily B, 2	AF152518|PCDHGB2|56103|protocadherin gamma subfamily B, 2	NM_018923|PCDHGB2|56103|protocadherin gamma subfamily B, 2	NM_032096|PCDHGB2|56103|protocadherin gamma subfamily B, 2
hg18_v1_chr5_+_161045235_161045235	0.0245996	SOX2.p2	NM_000811|GABRA6|2559|gamma-aminobutyric acid (GABA) A receptor, alpha 6
hg18_v1_chr19_+_7607976_7608009	0.0245664	SOX2.p2	NM_001127396|STXBP2|6813|syntaxin binding protein 2	NM_006949|STXBP2|6813|syntaxin binding protein 2	AK303701|STXBP2|6813|syntaxin binding protein 2	CR601226|STXBP2|6813|syntaxin binding protein 2	CR611106|STXBP2|6813|syntaxin binding protein 2	CR617049|STXBP2|6813|syntaxin binding protein 2	AK314230|STXBP2|6813|syntaxin binding protein 2	AK222967|STXBP2|6813|syntaxin binding protein 2	AK222977|STXBP2|6813|syntaxin binding protein 2
hg18_v1_chr8_+_17824772_17824779	0.0245451	SOX2.p2	AK307583|PCM1|5108|pericentriolar material 1
hg18_v1_chr2_-_208736533_208736610	0.0245282	SOX2.p2	EF426311|CRYGA|1418|crystallin, gamma A	NM_014617|CRYGA|1418|crystallin, gamma A	BC114456|CRYGA|1418|crystallin, gamma A
hg18_v1_chr10_-_43212166_43212284	0.0245104	SOX2.p2	NM_001098208|HNRNPF|3185|heterogeneous nuclear ribonucleoprotein F
hg18_v1_chr3_-_187124290_187124429	0.024491	SOX2.p2	AK091863|TRA2B|6434|transformer 2 beta homolog (Drosophila)
hg18_v1_chr12_+_100512877_100512977	0.0244669	SOX2.p2	AK296681|MYBPC1|4604|myosin binding protein C, slow type	NM_002465|MYBPC1|4604|myosin binding protein C, slow type	NM_206819|MYBPC1|4604|myosin binding protein C, slow type	NM_206820|MYBPC1|4604|myosin binding protein C, slow type	NM_206821|MYBPC1|4604|myosin binding protein C, slow type	AK056587|MYBPC1|4604|myosin binding protein C, slow type	AK292976|MYBPC1|4604|myosin binding protein C, slow type	AK295727|MYBPC1|4604|myosin binding protein C, slow type	AK303401|MYBPC1|4604|myosin binding protein C, slow type	BC015187|MYBPC1|4604|myosin binding protein C, slow type	BC030980|MYBPC1|4604|myosin binding protein C, slow type	BC065720|MYBPC1|4604|myosin binding protein C, slow type	BC092418|MYBPC1|4604|myosin binding protein C, slow type	X66276|MYBPC1|4604|myosin binding protein C, slow type	X73114|MYBPC1|4604|myosin binding protein C, slow type	AL831993|MYBPC1|4604|myosin binding protein C, slow type	AL832000|MYBPC1|4604|myosin binding protein C, slow type	AL832332|MYBPC1|4604|myosin binding protein C, slow type	AL832350|MYBPC1|4604|myosin binding protein C, slow type	AL832354|MYBPC1|4604|myosin binding protein C, slow type	AL832456|MYBPC1|4604|myosin binding protein C, slow type	BC117217|MYBPC1|4604|myosin binding protein C, slow type	BC143495|MYBPC1|4604|myosin binding protein C, slow type	BC143502|MYBPC1|4604|myosin binding protein C, slow type	BC143503|MYBPC1|4604|myosin binding protein C, slow type	BC143504|MYBPC1|4604|myosin binding protein C, slow type	AL834249|MYBPC1|4604|myosin binding protein C, slow type	BX649073|MYBPC1|4604|myosin binding protein C, slow type	AM392734|MYBPC1|4604|myosin binding protein C, slow type	EU831907|MYBPC1|4604|myosin binding protein C, slow type	EU832001|MYBPC1|4604|myosin binding protein C, slow type
hg18_v1_chr3_+_133801670_133801670	0.0244151	SOX2.p2	NM_178445|CCRL1|51554|chemokine (C-C motif) receptor-like 1
hg18_v1_chr2_+_169021001_169021010	0.0244126	SOX2.p2	AK172775|LASS6|253782|LAG1 homolog, ceramide synthase 6
hg18_v1_chr1_-_43410556_43410827	0.0244121	SOX2.p2	AK299476|EBNA1BP2|10969|EBNA1 binding protein 2	AK295006|EBNA1BP2|10969|EBNA1 binding protein 2	NM_006824|EBNA1BP2|10969|EBNA1 binding protein 2	NM_001159936|EBNA1BP2|10969|EBNA1 binding protein 2
hg18_v1_chr6_-_79844606_79844609	0.0243834	SOX2.p2	BC137488|PHIP|55023|pleckstrin homology domain interacting protein	BC144670|PHIP|55023|pleckstrin homology domain interacting protein
hg18_v1_chr2_-_242205556_242205588	0.0243616	SOX2.p2	AK225608|THAP4|51078|THAP domain containing 4	AF132970|THAP4|51078|THAP domain containing 4	NM_001164356|THAP4|51078|THAP domain containing 4
hg18_v1_chr6_+_44295219_44295449	0.02427	SOX2.p2	NM_001078174|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	NM_004955|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	BC095398|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	AK090491|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	AK304285|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	AB490708|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	U81375|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	AF079117|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1
hg18_v1_chr1_+_28717234_28717346	0.0242021	SOX2.p2	X12654|RCC1|1104|regulator of chromosome condensation 1	NM_001048194|RCC1|1104|regulator of chromosome condensation 1	NM_001048195|RCC1|1104|regulator of chromosome condensation 1	NM_001269|RCC1|1104|regulator of chromosome condensation 1
hg18_v1_chr11_+_4976788_4976788	0.024189	SOX2.p2	NM_001004755|OR51L1|119682|olfactory receptor, family 51, subfamily L, member 1
hg18_v1_chr3_+_180805266_180805309	0.0241486	SOX2.p2	NM_002492|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa	BX648034|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa	BC005271|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa	BC009796|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa	AK313822|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa	AF047181|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa	BC093071|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa	BC017909|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa
hg18_v1_chr14_+_56927066_56927105	0.0241041	SOX2.p2	BC118589|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit	BC122557|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit
hg18_v1_chr10_-_93992982_93993017	0.0240623	SOX2.p2	AB023157|CPEB3|22849|cytoplasmic polyadenylation element binding protein 3	NM_001178137|CPEB3|22849|cytoplasmic polyadenylation element binding protein 3
hg18_v1_chr14_+_34831355_34831433	0.0240554	SOX2.p2	BC023659|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6	BC017882|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6	X59417|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6	CR593415|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6	BC002979|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6	D28434|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6	BC022354|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6	AK316223|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6	DQ892346|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6	DQ895551|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6	CR456944|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6
hg18_v1_chr3_-_38967055_38967055	0.0239898	SOX2.p2	AF109737|SCN11A|11280|sodium channel, voltage-gated, type XI, alpha subunit	AF150882|SCN11A|11280|sodium channel, voltage-gated, type XI, alpha subunit	NM_014139|SCN11A|11280|sodium channel, voltage-gated, type XI, alpha subunit
hg18_v1_chr1_+_178867780_178867784	0.0239669	SOX2.p2	AK309750|XPR1|9213|xenotropic and polytropic retrovirus receptor 1
hg18_v1_chr2_-_169455167_169455208	0.0239633	SOX2.p2	AF225416|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)	CR590224|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)	BC022255|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)	NM_020675|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)	AK291093|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)
hg18_v1_chr20_+_30019465_30019636	0.0239498	SOX2.p2	AY534245|XKR7|343702|XK, Kell blood group complex subunit-related family, member 7	NM_001011718|XKR7|343702|XK, Kell blood group complex subunit-related family, member 7
hg18_v1_chr19_-_52614151_52614194	0.0239214	SOX2.p2	AK289950|MEIS3|56917|Meis homeobox 3
hg18_v1_chr7_-_124192916_124193149	0.0239098	SOX2.p2	BC040007|GPR37|2861|G protein-coupled receptor 37 (endothelin receptor type B-like)	NM_005302|GPR37|2861|G protein-coupled receptor 37 (endothelin receptor type B-like)
hg18_v1_chr1_+_151873174_151873354	0.0238705	SOX2.p2	AF318362|C1orf77|26097|chromosome 1 open reading frame 77	AK095230|C1orf77|26097|chromosome 1 open reading frame 77	AK308713|C1orf77|26097|chromosome 1 open reading frame 77	AK309844|C1orf77|26097|chromosome 1 open reading frame 77	CR612307|C1orf77|26097|chromosome 1 open reading frame 77	BC120961|C1orf77|26097|chromosome 1 open reading frame 77	BC120962|C1orf77|26097|chromosome 1 open reading frame 77
hg18_v1_chr6_+_79844267_79844292	0.0238542	SOX2.p2	BC036479|PHIP|55023|pleckstrin homology domain interacting protein
hg18_v1_chr6_+_43845875_43845914	0.0238528	SOX2.p2	CR614384|VEGFA|7422|vascular endothelial growth factor A
hg18_v1_chr8_+_73612179_73612216	0.0237971	SOX2.p2	AF338730|KCNB2|9312|potassium voltage-gated channel, Shab-related subfamily, member 2	NM_004770|KCNB2|9312|potassium voltage-gated channel, Shab-related subfamily, member 2
hg18_v1_chr7_+_143378393_143378427	0.0237936	SOX2.p2	BC136858|OR2A5|393046|olfactory receptor, family 2, subfamily A, member 5	BC136860|OR2A5|393046|olfactory receptor, family 2, subfamily A, member 5	NM_012365|OR2A5|393046|olfactory receptor, family 2, subfamily A, member 5
hg18_v1_chr14_+_20222175_20222211	0.0237804	SOX2.p2	FJ236304|ANG|283|angiogenin, ribonuclease, RNase A family, 5	NM_001145|ANG|283|angiogenin, ribonuclease, RNase A family, 5	AK092422|RNASE4|6038|ribonuclease, RNase A family, 4	NM_002937|RNASE4|6038|ribonuclease, RNase A family, 4
hg18_v1_chr2_+_183651756_183652032	0.0237683	SOX2.p2	AF486808|DUSP19|142679|dual specificity phosphatase 19	BC093958|DUSP19|142679|dual specificity phosphatase 19	BC112005|DUSP19|142679|dual specificity phosphatase 19	BC143337|DUSP19|142679|dual specificity phosphatase 19	AB038770|DUSP19|142679|dual specificity phosphatase 19	DQ891206|DUSP19|142679|dual specificity phosphatase 19	DQ894389|DUSP19|142679|dual specificity phosphatase 19	BX647818|DUSP19|142679|dual specificity phosphatase 19
hg18_v1_chr1_-_210654862_210654889	0.0237607	SOX2.p2	AK297200|TMEM206|55248|transmembrane protein 206	NM_001198862|TMEM206|55248|transmembrane protein 206	AK024066|TMEM206|55248|transmembrane protein 206	NM_018252|TMEM206|55248|transmembrane protein 206
hg18_v1_chr3_-_45242808_45242850	0.023742	SOX2.p2	NM_015444|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)
hg18_v1_chr4_+_68107039_68107122	0.023731	SOX2.p2	AB023483|STAP1|26228|signal transducing adaptor family member 1	NM_012108|STAP1|26228|signal transducing adaptor family member 1	AK313676|STAP1|26228|signal transducing adaptor family member 1	BC014958|STAP1|26228|signal transducing adaptor family member 1
hg18_v1_chr2_+_46779553_46779602	0.0237296	SOX2.p2	AK290194|SOCS5|9655|suppressor of cytokine signaling 5	AB014571|SOCS5|9655|suppressor of cytokine signaling 5	AL136896|SOCS5|9655|suppressor of cytokine signaling 5	NM_014011|SOCS5|9655|suppressor of cytokine signaling 5
hg18_v1_chr6_-_29635456_29635489	0.0237165	SOX2.p2	DQ894624|UBD|10537|ubiquitin D	Y12653|UBD|10537|ubiquitin D	BC012472|UBD|10537|ubiquitin D	AK311914|UBD|10537|ubiquitin D
hg18_v1_chr1_-_23758503_23758640	0.0236707	SOX2.p2	BT006791|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	DQ892504|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	DQ895539|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	DQ895717|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	CR612668|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	CR597388|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	CR615457|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	CR611504|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	BC003107|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	D28449|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	AK290003|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein
hg18_v1_chr19_+_9334695_9334695	0.0235866	SOX2.p2	NM_003451|ZNF177|7730|zinc finger protein 177	U37263|ZNF177|7730|zinc finger protein 177
hg18_v1_chr1_-_146090802_146091049	0.0235767	SOX2.p2	AY894575|NBPF1|55672|neuroblastoma breakpoint family, member 1	BX648497|NBPF11|200030|neuroblastoma breakpoint family, member 11
hg18_v1_chr17_+_46176105_46176113	0.0235415	SOX2.p2	AF147357|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)
hg18_v1_chr5_+_137701852_137701854	0.0234806	SOX2.p2	AK027412|FAM53C|51307|family with sequence similarity 53, member C	AK310378|FAM53C|51307|family with sequence similarity 53, member C	AK315567|FAM53C|51307|family with sequence similarity 53, member C
hg18_v1_chr1_+_61319976_61320121	0.0234713	SOX2.p2	AK299579|NFIA|4774|nuclear factor I/A	NM_001145512|NFIA|4774|nuclear factor I/A
hg18_v1_chr2_-_198007984_198008008	0.0234169	SOX2.p2	BC046140|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa	BC107883|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa	AK290470|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa	BC029418|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa	BC015530|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa
hg18_v1_chr1_+_32889335_32889545	0.0233945	SOX2.p2	NM_001135255|RBBP4|5928|retinoblastoma binding protein 4	NM_005610|RBBP4|5928|retinoblastoma binding protein 4	AK312571|RBBP4|5928|retinoblastoma binding protein 4	AK299410|RBBP4|5928|retinoblastoma binding protein 4	BC003092|RBBP4|5928|retinoblastoma binding protein 4	X74262|RBBP4|5928|retinoblastoma binding protein 4	X71810|RBBP4|5928|retinoblastoma binding protein 4	BC053904|RBBP4|5928|retinoblastoma binding protein 4	AK222779|RBBP4|5928|retinoblastoma binding protein 4	BC075836|RBBP4|5928|retinoblastoma binding protein 4	DQ892499|RBBP4|5928|retinoblastoma binding protein 4	DQ895712|RBBP4|5928|retinoblastoma binding protein 4	BT007309|RBBP4|5928|retinoblastoma binding protein 4	AK299251|RBBP4|5928|retinoblastoma binding protein 4	NM_001135256|RBBP4|5928|retinoblastoma binding protein 4
hg18_v1_chr15_-_39151468_39151524	0.023326	SOX2.p2	AK057582|INO80|54617|INO80 homolog (S. cerevisiae)
hg18_v1_chr1_+_178867796_178868004	0.0233213	SOX2.p2	AF099082|XPR1|9213|xenotropic and polytropic retrovirus receptor 1	AF115389|XPR1|9213|xenotropic and polytropic retrovirus receptor 1
hg18_v1_chr12_+_109046522_109046686	0.0233151	SOX2.p2	NM_001143779|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)	NM_014055|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)	NM_031473|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)	CR608549|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)	AF139540|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)	AF332010|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)	BC005396|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)	AF250326|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)	AK291043|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)	BC004536|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)
hg18_v1_chr8_+_145136226_145136304	0.0232858	SOX2.p2	BC041788|GRINA|2907|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)	AB097026|GRINA|2907|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)	AK294127|GRINA|2907|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)
hg18_v1_chr7_+_37689903_37689911	0.023203	SOX2.p2	
hg18_v1_chrX_+_24621984_24621988	0.0231762	SOX2.p2	NM_016937|POLA1|5422|polymerase (DNA directed), alpha 1, catalytic subunit	X06745|POLA1|5422|polymerase (DNA directed), alpha 1, catalytic subunit
hg18_v1_chr1_-_203985752_203985779	0.0231662	SOX2.p2	AY823399|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1
hg18_v1_chr18_+_37789209_37789254	0.0231656	SOX2.p2	BC033004|PIK3C3|5289|phosphoinositide-3-kinase, class 3	AK298517|PIK3C3|5289|phosphoinositide-3-kinase, class 3	BC010388|PIK3C3|5289|phosphoinositide-3-kinase, class 3	AK308364|PIK3C3|5289|phosphoinositide-3-kinase, class 3	BC053651|PIK3C3|5289|phosphoinositide-3-kinase, class 3	DQ890552|PIK3C3|5289|phosphoinositide-3-kinase, class 3	DQ893712|PIK3C3|5289|phosphoinositide-3-kinase, class 3
hg18_v1_chr1_+_12900031_12900099	0.0230838	SOX2.p2	BC144565|PRAMEF7|441871|PRAME family member 7	NM_001012277|PRAMEF7|441871|PRAME family member 7
hg18_v1_chr10_+_26545241_26545241	0.0230817	SOX2.p2	NM_000818|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)	NM_001134366|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)
hg18_v1_chr8_-_7320013_7320013	0.0230805	SOX2.p2	AJ314834|DEFB104A|140596|defensin, beta 104A	BC100848|DEFB104A|140596|defensin, beta 104A	BC100849|DEFB104A|140596|defensin, beta 104A	BC100850|DEFB104A|140596|defensin, beta 104A	BC100851|DEFB104A|140596|defensin, beta 104A	NM_001040702|DEFB104B|503618|defensin, beta 104B	NM_080389|DEFB104A|140596|defensin, beta 104A
hg18_v1_chrX_+_119621933_119622010	0.0230426	SOX2.p2	BC095461|MCTS1|28985|malignant T cell amplified sequence 1
hg18_v1_chr1_+_112740380_112740403	0.0230176	SOX2.p2	BC016029|CTTNBP2NL|55917|CTTNBP2 N-terminal like	AK022544|CTTNBP2NL|55917|CTTNBP2 N-terminal like	AK092791|LOC100129406|100129406|hypothetical protein LOC100129406
hg18_v1_chr11_+_32994303_32994303	0.0230159	SOX2.p2	AF447588|DEPDC7|91614|DEP domain containing 7	NM_139160|DEPDC7|91614|DEP domain containing 7
hg18_v1_chr3_-_39298187_39298236	0.022996	SOX2.p2	NM_001171174|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1
hg18_v1_chr5_-_147191334_147191392	0.0229718	SOX2.p2	DQ893613|SPINK1|6690|serine peptidase inhibitor, Kazal type 1	DQ896842|SPINK1|6690|serine peptidase inhibitor, Kazal type 1	BC025790|SPINK1|6690|serine peptidase inhibitor, Kazal type 1	Y00705|SPINK1|6690|serine peptidase inhibitor, Kazal type 1
hg18_v1_chr6_-_30763057_30763079	0.022928	SOX2.p2	AB075829|KIAA1949|170954|KIAA1949	NM_001134870|KIAA1949|170954|KIAA1949	AK125639|KIAA1949|170954|KIAA1949
hg18_v1_chr2_+_73973640_73973651	0.0228705	SOX2.p2	AK124338|ACTG2|72|actin, gamma 2, smooth muscle, enteric	AK304523|ACTG2|72|actin, gamma 2, smooth muscle, enteric	AK310215|ACTG2|72|actin, gamma 2, smooth muscle, enteric	AK312955|ACTG2|72|actin, gamma 2, smooth muscle, enteric	BC012617|ACTG2|72|actin, gamma 2, smooth muscle, enteric	X16940|ACTG2|72|actin, gamma 2, smooth muscle, enteric
hg18_v1_chr2_-_38379031_38379115	0.0228395	SOX2.p2	AK316179|ATL2|64225|atlastin GTPase 2
hg18_v1_chr1_+_23990228_23990297	0.0228026	SOX2.p2	CR597442|LYPLA2|11313|lysophospholipase II	CR607318|LYPLA2|11313|lysophospholipase II	CR614223|LYPLA2|11313|lysophospholipase II	AF098668|LYPLA2|11313|lysophospholipase II	NM_007260|LYPLA2|11313|lysophospholipase II	CR590473|LYPLA2|11313|lysophospholipase II	CR595388|LYPLA2|11313|lysophospholipase II	CR621740|LYPLA2|11313|lysophospholipase II	CR606705|LYPLA2|11313|lysophospholipase II	CR601116|LYPLA2|11313|lysophospholipase II	CR593399|LYPLA2|11313|lysophospholipase II	CR605682|LYPLA2|11313|lysophospholipase II	CR609115|LYPLA2|11313|lysophospholipase II	BC017034|LYPLA2|11313|lysophospholipase II	CR614434|LYPLA2|11313|lysophospholipase II	CR624649|LYPLA2|11313|lysophospholipase II	BC017193|LYPLA2|11313|lysophospholipase II	CR623546|LYPLA2|11313|lysophospholipase II
hg18_v1_chr8_+_61592278_61592331	0.0227917	SOX2.p2	M28213|RAB2A|5862|RAB2A, member RAS oncogene family	CR605346|RAB2A|5862|RAB2A, member RAS oncogene family	AF498930|RAB2A|5862|RAB2A, member RAS oncogene family	BT019695|RAB2A|5862|RAB2A, member RAS oncogene family
hg18_v1_chr1_+_157526127_157526127	0.0227614	SOX2.p2	NM_002001|FCER1A|2205|Fc fragment of IgE, high affinity I, receptor for; alpha polypeptide	X06948|FCER1A|2205|Fc fragment of IgE, high affinity I, receptor for; alpha polypeptide
hg18_v1_chr2_+_149119029_149119117	0.0227457	SOX2.p2	NM_015630|EPC2|26122|enhancer of polycomb homolog 2 (Drosophila)	AF286904|EPC2|26122|enhancer of polycomb homolog 2 (Drosophila)	BC093818|EPC2|26122|enhancer of polycomb homolog 2 (Drosophila)	BC093820|EPC2|26122|enhancer of polycomb homolog 2 (Drosophila)
hg18_v1_chr2_+_61146542_61146622	0.0227215	SOX2.p2	AL833595|KIAA1841|84542|KIAA1841	BX647395|KIAA1841|84542|KIAA1841
hg18_v1_chr15_+_64372686_64372713	0.0226605	SOX2.p2	NM_133375|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like	AK295392|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like	BC022089|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like
hg18_v1_chr8_+_62363078_62363131	0.0225487	SOX2.p2	NM_173519|CLVS1|157807|clavesin 1	AF445194|CLVS1|157807|clavesin 1	BC048992|CLVS1|157807|clavesin 1	AK091641|CLVS1|157807|clavesin 1	BC042617|CLVS1|157807|clavesin 1	CR591744|CLVS1|157807|clavesin 1	CR599613|CLVS1|157807|clavesin 1	AY094971|CLVS1|157807|clavesin 1	AK313040|CLVS1|157807|clavesin 1
hg18_v1_chr5_+_140568451_140568475	0.0225235	SOX2.p2	AK316160|PCDHB12|56124|protocadherin beta 12	BC045637|PCDHB12|56124|protocadherin beta 12	NM_018932|PCDHB12|56124|protocadherin beta 12
hg18_v1_chr6_+_26070957_26071068	0.0224964	SOX2.p2	BX640949|TRIM38|10475|tripartite motif containing 38	AK313248|TRIM38|10475|tripartite motif containing 38	BC026930|TRIM38|10475|tripartite motif containing 38	NM_006355|TRIM38|10475|tripartite motif containing 38	AB209906|TRIM38|10475|tripartite motif containing 38
hg18_v1_chr3_+_88270951_88270951	0.0224906	SOX2.p2	AF543494|ZNF654|55279|zinc finger protein 654	NM_018293|ZNF654|55279|zinc finger protein 654
hg18_v1_chr2_+_204509698_204509781	0.0224798	SOX2.p2	AK314985|ICOS|29851|inducible T-cell co-stimulator	AJ277832|ICOS|29851|inducible T-cell co-stimulator	NM_012092|ICOS|29851|inducible T-cell co-stimulator	BC028006|ICOS|29851|inducible T-cell co-stimulator	BC028210|ICOS|29851|inducible T-cell co-stimulator	AB023135|ICOS|29851|inducible T-cell co-stimulator
hg18_v1_chr6_+_15354278_15354505	0.0224328	SOX2.p2	AK292861|JARID2|3720|jumonji, AT rich interactive domain 2	BC046246|JARID2|3720|jumonji, AT rich interactive domain 2	NM_004973|JARID2|3720|jumonji, AT rich interactive domain 2	U57592|JARID2|3720|jumonji, AT rich interactive domain 2
hg18_v1_chr10_+_102749222_102749254	0.022414	SOX2.p2	AB058716|LZTS2|84445|leucine zipper, putative tumor suppressor 2
hg18_v1_chr1_-_203985932_203985939	0.0223682	SOX2.p2	
hg18_v1_chr3_-_187138527_187138617	0.0223657	SOX2.p2	AK315632|TRA2B|6434|transformer 2 beta homolog (Drosophila)	NM_004593|TRA2B|6434|transformer 2 beta homolog (Drosophila)
hg18_v1_chrX_+_46977306_46977512	0.0222377	SOX2.p2	AK055588|USP11|8237|ubiquitin specific peptidase 11	AK098394|USP11|8237|ubiquitin specific peptidase 11	CR606453|USP11|8237|ubiquitin specific peptidase 11	BC073960|USP11|8237|ubiquitin specific peptidase 11	BC063668|USP11|8237|ubiquitin specific peptidase 11	AB073597|USP11|8237|ubiquitin specific peptidase 11	BC000350|USP11|8237|ubiquitin specific peptidase 11	U44839|USP11|8237|ubiquitin specific peptidase 11	AK294635|USP11|8237|ubiquitin specific peptidase 11
hg18_v1_chr3_-_69212192_69212234	0.0222126	SOX2.p2	AM392893|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AM393088|UBA3|9039|ubiquitin-like modifier activating enzyme 3	CR533537|UBA3|9039|ubiquitin-like modifier activating enzyme 3	DQ893167|UBA3|9039|ubiquitin-like modifier activating enzyme 3	DQ896465|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK314751|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK289392|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK002159|UBA3|9039|ubiquitin-like modifier activating enzyme 3	CR598743|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AL117566|UBA3|9039|ubiquitin-like modifier activating enzyme 3	BC022853|UBA3|9039|ubiquitin-like modifier activating enzyme 3	NM_003968|UBA3|9039|ubiquitin-like modifier activating enzyme 3	NM_198195|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK298878|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK316540|UBA3|9039|ubiquitin-like modifier activating enzyme 3
hg18_v1_chr12_+_49155798_49155910	0.0221924	SOX2.p2	AF131755|LARP4|113251|La ribonucleoprotein domain family, member 4
hg18_v1_chr4_+_140806371_140806509	0.0221444	SOX2.p2	NM_002413|MGST2|4258|microsomal glutathione S-transferase 2	AK130948|MGST2|4258|microsomal glutathione S-transferase 2	BC025416|MGST2|4258|microsomal glutathione S-transferase 2
hg18_v1_chr8_+_22078817_22078872	0.0221106	SOX2.p2	M22488|BMP1|649|bone morphogenetic protein 1	Y08723|BMP1|649|bone morphogenetic protein 1	Y08724|BMP1|649|bone morphogenetic protein 1	Y08725|BMP1|649|bone morphogenetic protein 1	U50330|BMP1|649|bone morphogenetic protein 1
hg18_v1_chr15_-_74941339_74941339	0.0220934	SOX2.p2	BX647285|SCAPER|49855|S-phase cyclin A-associated protein in the ER	NM_001145923|SCAPER|49855|S-phase cyclin A-associated protein in the ER
hg18_v1_chr3_+_14835472_14835472	0.022018	SOX2.p2	NM_152536|FGD5|152273|FYVE, RhoGEF and PH domain containing 5
hg18_v1_chr9_-_35101592_35101619	0.0219591	SOX2.p2	CR601417|KIAA1539|80256|KIAA1539
hg18_v1_chr14_-_68689574_68689620	0.0219395	SOX2.p2	BC136632|DCAF5|8816|DDB1 and CUL4 associated factor 5
hg18_v1_chr3_-_198960964_198960964	0.0219215	SOX2.p2	NM_001145642|KIAA0226|9711|KIAA0226
hg18_v1_chr4_-_170428564_170428680	0.0219104	SOX2.p2	BC053671|SH3RF1|57630|SH3 domain containing ring finger 1
hg18_v1_chr6_-_53034445_53034538	0.0218533	SOX2.p2	AB023153|ICK|22858|intestinal cell (MAK-like) kinase	BC152464|ICK|22858|intestinal cell (MAK-like) kinase	AF152469|ICK|22858|intestinal cell (MAK-like) kinase	AK074892|ICK|22858|intestinal cell (MAK-like) kinase
hg18_v1_chr12_-_9987277_9987303	0.0218406	SOX2.p2	CR625615|LOC100506159|100506159|hypothetical LOC100506159
hg18_v1_chr19_+_46207335_46207421	0.021835	SOX2.p2	X06399|CYP2B6|1555|cytochrome P450, family 2, subfamily B, polypeptide 6
hg18_v1_chr7_+_93862137_93862278	0.0218137	SOX2.p2	AK297786|COL1A2|1278|collagen, type I, alpha 2	AK223175|COL1A2|1278|collagen, type I, alpha 2	AK300194|COL1A2|1278|collagen, type I, alpha 2	Z74616|COL1A2|1278|collagen, type I, alpha 2	AK226074|COL1A2|1278|collagen, type I, alpha 2	BC042586|COL1A2|1278|collagen, type I, alpha 2	BC054498|COL1A2|1278|collagen, type I, alpha 2	AF221550|PLAG1|5324|pleiomorphic adenoma gene 1	Y00724|COL1A2|1278|collagen, type I, alpha 2
hg18_v1_chr19_-_57100052_57100116	0.0218059	SOX2.p2	AK000909|ZNF649|65251|zinc finger protein 649	CR590368|ZNF649|65251|zinc finger protein 649	AL713677|ZNF649|65251|zinc finger protein 649	AK225480|ZNF649|65251|zinc finger protein 649	BC005368|ZNF649|65251|zinc finger protein 649	AK315487|ZNF649|65251|zinc finger protein 649	NM_023074|ZNF649|65251|zinc finger protein 649
hg18_v1_chr7_+_156496360_156496374	0.0218032	SOX2.p2	BC022831|LOC645249|645249|hypothetical LOC645249	BC033117|LOC645249|645249|hypothetical LOC645249
hg18_v1_chr11_+_36572615_36572746	0.0217796	SOX2.p2	AK290833|C11orf74|119710|chromosome 11 open reading frame 74	DQ121386|C11orf74|119710|chromosome 11 open reading frame 74	CR618125|C11orf74|119710|chromosome 11 open reading frame 74	AK095997|C11orf74|119710|chromosome 11 open reading frame 74	AK299642|C11orf74|119710|chromosome 11 open reading frame 74	BC009561|C11orf74|119710|chromosome 11 open reading frame 74	CR612900|C11orf74|119710|chromosome 11 open reading frame 74	BC051031|C11orf74|119710|chromosome 11 open reading frame 74	NM_138787|C11orf74|119710|chromosome 11 open reading frame 74	AK302634|C11orf74|119710|chromosome 11 open reading frame 74
hg18_v1_chr3_+_198961620_198961657	0.0217461	SOX2.p2	AK302546|FYTTD1|84248|forty-two-three domain containing 1
hg18_v1_chr14_+_71468902_71468911	0.0217153	SOX2.p2	AK294486|RGS6|9628|regulator of G-protein signaling 6
hg18_v1_chr1_+_246578699_246578699	0.0217063	SOX2.p2	NM_001001918|OR14C36|127066|olfactory receptor, family 14, subfamily C, member 36
hg18_v1_chr11_+_69165119_69165143	0.0217016	SOX2.p2	BC000076|CCND1|595|cyclin D1	BC001501|CCND1|595|cyclin D1	BC014078|CCND1|595|cyclin D1	M73554|CCND1|595|cyclin D1	BC023620|CCND1|595|cyclin D1
hg18_v1_chr1_-_59022275_59022372	0.0216849	SOX2.p2	BC002646|JUN|3725|jun proto-oncogene	BC068522|JUN|3725|jun proto-oncogene	NM_002228|JUN|3725|jun proto-oncogene
hg18_v1_chr10_+_99069007_99069087	0.021675	SOX2.p2	NM_005479|FRAT1|10023|frequently rearranged in advanced T-cell lymphomas	AK307245|FRAT1|10023|frequently rearranged in advanced T-cell lymphomas	U58975|FRAT1|10023|frequently rearranged in advanced T-cell lymphomas	BC034476|FRAT1|10023|frequently rearranged in advanced T-cell lymphomas	AB074890|FRAT1|10023|frequently rearranged in advanced T-cell lymphomas
hg18_v1_chr17_+_71773026_71773179	0.0216461	SOX2.p2	CR613339|FAM100B|283991|family with sequence similarity 100, member B	CR599986|FAM100B|283991|family with sequence similarity 100, member B	BC035511|FAM100B|283991|family with sequence similarity 100, member B	EU176314|FAM100B|283991|family with sequence similarity 100, member B
hg18_v1_chr4_+_84676414_84676796	0.0215912	SOX2.p2	DQ345298|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9	BC090956|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9	AY358100|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9	NM_032717|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9	DQ324782|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9
hg18_v1_chr8_+_118216517_118216517	0.0215749	SOX2.p2	NM_001172814|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8	NM_173851|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8
hg18_v1_chr19_-_55709577_55709777	0.02155	SOX2.p2	BC066359|ASPDH|554235|aspartate dehydrogenase domain containing	NM_001024656|ASPDH|554235|aspartate dehydrogenase domain containing
hg18_v1_chr10_+_35466715_35466769	0.021544	SOX2.p2	NM_183011|CREM|1390|cAMP responsive element modulator	NM_183012|CREM|1390|cAMP responsive element modulator
hg18_v1_chr2_-_55131202_55131237	0.021504	SOX2.p2	AY123246|RTN4|57142|reticulon 4	NM_020532|RTN4|57142|reticulon 4	NM_153828|RTN4|57142|reticulon 4	NM_207520|RTN4|57142|reticulon 4
hg18_v1_chr11_-_117589283_117589283	0.0214495	SOX2.p2	AK094399|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1	NM_153206|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1
hg18_v1_chr3_-_195835593_195835712	0.0214086	SOX2.p2	AK126914|TMEM44|93109|transmembrane protein 44	BC039506|TMEM44|93109|transmembrane protein 44
hg18_v1_chr11_+_16716751_16716970	0.0214067	SOX2.p2	BC103747|C11orf58|10944|chromosome 11 open reading frame 58	AK315382|C11orf58|10944|chromosome 11 open reading frame 58	BC007103|C11orf58|10944|chromosome 11 open reading frame 58	BC016352|C11orf58|10944|chromosome 11 open reading frame 58	BC020937|C11orf58|10944|chromosome 11 open reading frame 58	CR602799|C11orf58|10944|chromosome 11 open reading frame 58	CR592723|C11orf58|10944|chromosome 11 open reading frame 58	CR614521|C11orf58|10944|chromosome 11 open reading frame 58	CR606236|C11orf58|10944|chromosome 11 open reading frame 58	CR602558|C11orf58|10944|chromosome 11 open reading frame 58	CR623569|C11orf58|10944|chromosome 11 open reading frame 58	CR600300|C11orf58|10944|chromosome 11 open reading frame 58	CR616149|C11orf58|10944|chromosome 11 open reading frame 58	CR614900|C11orf58|10944|chromosome 11 open reading frame 58	U51678|C11orf58|10944|chromosome 11 open reading frame 58	CR456882|C11orf58|10944|chromosome 11 open reading frame 58
hg18_v1_chr11_-_61316628_61316664	0.0213926	SOX2.p2	BC002750|C11orf10|746|chromosome 11 open reading frame 10	AF085986|C11orf10|746|chromosome 11 open reading frame 10	AK291683|C11orf10|746|chromosome 11 open reading frame 10	AF086763|C11orf10|746|chromosome 11 open reading frame 10	BC015968|C11orf10|746|chromosome 11 open reading frame 10	AF070661|C11orf10|746|chromosome 11 open reading frame 10	NM_014206|C11orf10|746|chromosome 11 open reading frame 10
hg18_v1_chr9_-_35101534_35101570	0.0213423	SOX2.p2	AB040972|KIAA1539|80256|KIAA1539
hg18_v1_chr6_+_43257883_43257902	0.0213277	SOX2.p2	AK125228|CUL9|23113|cullin 9	CR749511|CUL9|23113|cullin 9	NM_015089|CUL9|23113|cullin 9	CR749841|CUL9|23113|cullin 9
hg18_v1_chr6_-_133008834_133008858	0.0213085	SOX2.p2	AY180374|TAAR1|134864|trace amine associated receptor 1	NM_138327|TAAR1|134864|trace amine associated receptor 1	BC101825|TAAR1|134864|trace amine associated receptor 1	BC112194|TAAR1|134864|trace amine associated receptor 1
hg18_v1_chr12_+_54646814_54646899	0.0213061	SOX2.p2	NM_001798|CDK2|1017|cyclin-dependent kinase 2	NM_052827|CDK2|1017|cyclin-dependent kinase 2	M68520|CDK2|1017|cyclin-dependent kinase 2	AK293246|CDK2|1017|cyclin-dependent kinase 2	AK291941|CDK2|1017|cyclin-dependent kinase 2	X62071|CDK2|1017|cyclin-dependent kinase 2	CR603533|CDK2|1017|cyclin-dependent kinase 2	BC003065|CDK2|1017|cyclin-dependent kinase 2
hg18_v1_chr13_+_47775776_47775886	0.0212948	SOX2.p2	AK291258|RB1|5925|retinoblastoma 1	AK300284|RB1|5925|retinoblastoma 1	NM_000321|RB1|5925|retinoblastoma 1
hg18_v1_chr1_-_12830728_12830899	0.0212801	SOX2.p2	BC171859|LOC649330|649330|heterogeneous nuclear ribonucleoprotein C-like	BC171865|LOC649330|649330|heterogeneous nuclear ribonucleoprotein C-like	BC171866|HNRNPCL1|343069|heterogeneous nuclear ribonucleoprotein C-like 1	NM_001146181|LOC649330|649330|heterogeneous nuclear ribonucleoprotein C-like
hg18_v1_chr6_+_31891293_31891339	0.0212709	SOX2.p2	AK096017|HSPA1A|3303|heat shock 70kDa protein 1A	AK225692|HSPA1A|3303|heat shock 70kDa protein 1A	AK225699|HSPA1A|3303|heat shock 70kDa protein 1A	AK291295|HSPA1A|3303|heat shock 70kDa protein 1A	AK294182|HSPA1A|3303|heat shock 70kDa protein 1A	AK298056|HSPA1A|3303|heat shock 70kDa protein 1A	AK301574|HSPA1A|3303|heat shock 70kDa protein 1A	AK303980|HSPA1A|3303|heat shock 70kDa protein 1A	AK304618|HSPA1A|3303|heat shock 70kDa protein 1A	AK304652|HSPA1A|3303|heat shock 70kDa protein 1A	AK301243|HSPA1A|3303|heat shock 70kDa protein 1A	AB209818|HSPA1A|3303|heat shock 70kDa protein 1A	CR620700|HSPA1A|3303|heat shock 70kDa protein 1A	CR591386|HSPA1A|3303|heat shock 70kDa protein 1A	CR609187|HSPA1A|3303|heat shock 70kDa protein 1A	CR593858|HSPA1A|3303|heat shock 70kDa protein 1A	CR606370|HSPA1A|3303|heat shock 70kDa protein 1A	CR609094|HSPA1A|3303|heat shock 70kDa protein 1A	CR610055|HSPA1A|3303|heat shock 70kDa protein 1A	BC002453|HSPA1A|3303|heat shock 70kDa protein 1A	CR605852|HSPA1A|3303|heat shock 70kDa protein 1A
hg18_v1_chr5_+_70980724_70980762	0.0212336	SOX2.p2	AK025591|MCCC2|64087|methylcrotonoyl-CoA carboxylase 2 (beta)
hg18_v1_chr1_+_25629968_25630176	0.0212095	SOX2.p2	AK311472|TMEM57|55219|transmembrane protein 57	NM_018202|TMEM57|55219|transmembrane protein 57	AY845015|TMEM57|55219|transmembrane protein 57	BC007687|TMEM57|55219|transmembrane protein 57	AK001609|TMEM57|55219|transmembrane protein 57	AY845035|TMEM57|55219|transmembrane protein 57	AY845036|TMEM57|55219|transmembrane protein 57	BC032427|TMEM57|55219|transmembrane protein 57	BC020801|TMEM57|55219|transmembrane protein 57
hg18_v1_chr11_-_780065_780091	0.0211933	SOX2.p2	CR625212|CEND1|51286|cell cycle exit and neuronal differentiation 1	CR625795|CEND1|51286|cell cycle exit and neuronal differentiation 1
hg18_v1_chr22_+_28329649_28330080	0.0211433	SOX2.p2	BC020257|NF2|4771|neurofibromin 2 (merlin)	BC003112|NF2|4771|neurofibromin 2 (merlin)	L11353|NF2|4771|neurofibromin 2 (merlin)	Z22664|NF2|4771|neurofibromin 2 (merlin)	CR456530|NF2|4771|neurofibromin 2 (merlin)	AF122827|NF2|4771|neurofibromin 2 (merlin)	AF122828|NF2|4771|neurofibromin 2 (merlin)	AF123570|NF2|4771|neurofibromin 2 (merlin)	CU013130|NF2|4771|neurofibromin 2 (merlin)	CU013418|NF2|4771|neurofibromin 2 (merlin)	DQ891697|NF2|4771|neurofibromin 2 (merlin)	DQ894878|NF2|4771|neurofibromin 2 (merlin)	AF369661|NF2|4771|neurofibromin 2 (merlin)	AF369662|NF2|4771|neurofibromin 2 (merlin)	AF369663|NF2|4771|neurofibromin 2 (merlin)	AF369664|NF2|4771|neurofibromin 2 (merlin)	AF369665|NF2|4771|neurofibromin 2 (merlin)	AF369666|NF2|4771|neurofibromin 2 (merlin)	AF369667|NF2|4771|neurofibromin 2 (merlin)	AF369668|NF2|4771|neurofibromin 2 (merlin)	EF517524|NF2|4771|neurofibromin 2 (merlin)	S73853|NF2|4771|neurofibromin 2 (merlin)
hg18_v1_chr16_+_73590739_73590783	0.0211319	SOX2.p2	AK294434|ZNRF1|84937|zinc and ring finger 1	BC007235|ZNRF1|84937|zinc and ring finger 1	AF378524|ZNRF1|84937|zinc and ring finger 1	AL136903|ZNRF1|84937|zinc and ring finger 1
hg18_v1_chr2_-_55130925_55130945	0.0211053	SOX2.p2	AF320999|RTN4|57142|reticulon 4	AJ251383|RTN4|57142|reticulon 4	AJ251384|RTN4|57142|reticulon 4	AM393104|RTN4|57142|reticulon 4	AM393557|RTN4|57142|reticulon 4	BC010737|RTN4|57142|reticulon 4
hg18_v1_chr11_+_34029764_34029814	0.02102	SOX2.p2	BC001731|CAPRIN1|4076|cell cycle associated protein 1	NM_005898|CAPRIN1|4076|cell cycle associated protein 1	NM_203364|CAPRIN1|4076|cell cycle associated protein 1
hg18_v1_chr2_-_1905508_1905609	0.0210169	SOX2.p2	AL133024|MYT1L|23040|myelin transcription factor 1-like
hg18_v1_chr17_+_41457394_41457437	0.0209836	SOX2.p2	AB073354|MAPT|4137|microtubule-associated protein tau
hg18_v1_chr8_+_98725505_98725602	0.0209584	SOX2.p2	BC045642|MTDH|92140|metadherin	NM_178812|MTDH|92140|metadherin	BC001815|MTDH|92140|metadherin
hg18_v1_chr19_-_50912429_50912478	0.0209329	SOX2.p2	
hg18_v1_chr19_+_3713650_3713670	0.0209106	SOX2.p2	NM_172251|MRPL54|116541|mitochondrial ribosomal protein L54
hg18_v1_chr16_+_87164311_87164312	0.0208518	SOX2.p2	AK300254|ZC3H18|124245|zinc finger CCCH-type containing 18	AK302716|ZC3H18|124245|zinc finger CCCH-type containing 18
hg18_v1_chr12_-_6586811_6586824	0.0208254	SOX2.p2	AK128741|CHD4|1108|chromodomain helicase DNA binding protein 4	NM_001273|CHD4|1108|chromodomain helicase DNA binding protein 4
hg18_v1_chr19_+_48792383_48792383	0.0207912	SOX2.p2	AK026353|ZNF576|79177|zinc finger protein 576	NM_024327|ZNF576|79177|zinc finger protein 576
hg18_v1_chr11_-_62229477_62229665	0.020778	SOX2.p2	CR590725|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)
hg18_v1_chr7_+_91762227_91762355	0.020702	SOX2.p2	
hg18_v1_chr5_+_36642424_36642547	0.0206843	SOX2.p2	AK312304|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	BC037310|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK057823|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK293886|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	BC022285|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	BC054475|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK295032|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK295754|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	D26443|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	L19158|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3
hg18_v1_chr20_-_118263_118321	0.0206799	SOX2.p2	AF525930|DEFB128|245939|defensin, beta 128	NM_001037732|DEFB128|245939|defensin, beta 128	BC140936|DEFB128|245939|defensin, beta 128
hg18_v1_chr12_-_55405577_55405594	0.0206792	SOX2.p2	NM_001113202|NACA|4666|nascent polypeptide-associated complex alpha subunit	NM_001113203|NACA|4666|nascent polypeptide-associated complex alpha subunit
hg18_v1_chr7_+_149651481_149651537	0.0206618	SOX2.p2	BC001354|LRRC61|65999|leucine rich repeat containing 61
hg18_v1_chr5_+_140537554_140537613	0.0205487	SOX2.p2	BC136801|PCDHB8|56128|protocadherin beta 8	NM_019120|PCDHB8|56128|protocadherin beta 8
hg18_v1_chr11_+_123282307_123282348	0.0205432	SOX2.p2	BC137180|OR8D4|338662|olfactory receptor, family 8, subfamily D, member 4	BC137206|OR8D4|338662|olfactory receptor, family 8, subfamily D, member 4	NM_001005197|OR8D4|338662|olfactory receptor, family 8, subfamily D, member 4
hg18_v1_chr10_+_104253706_104253713	0.0204686	SOX2.p2	NM_001178133|SUFU|51684|suppressor of fused homolog (Drosophila)	NM_016169|SUFU|51684|suppressor of fused homolog (Drosophila)
hg18_v1_chr1_-_44912704_44912766	0.0204353	SOX2.p2	AK296548|TMEM53|79639|transmembrane protein 53	BC007521|TMEM53|79639|transmembrane protein 53
hg18_v1_chr5_+_109052945_109052982	0.0204124	SOX2.p2	BC031659|MAN2A1|4124|mannosidase, alpha, class 2A, member 1
hg18_v1_chr17_+_56032385_56032557	0.0203359	SOX2.p2	BC016480|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	BC042418|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	BC032826|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	BC033893|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	DQ891047|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	EU176552|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	BT009780|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D
hg18_v1_chr3_+_46258875_46258966	0.0203035	SOX2.p2	NM_001164680|CCR3|1232|chemokine (C-C motif) receptor 3	NM_001837|CCR3|1232|chemokine (C-C motif) receptor 3	NM_178328|CCR3|1232|chemokine (C-C motif) receptor 3	NM_178329|CCR3|1232|chemokine (C-C motif) receptor 3	AF262300|CCR3|1232|chemokine (C-C motif) receptor 3	AF262299|CCR3|1232|chemokine (C-C motif) receptor 3	AF224495|CCR3|1232|chemokine (C-C motif) receptor 3	AF262301|CCR3|1232|chemokine (C-C motif) receptor 3	AF262302|CCR3|1232|chemokine (C-C motif) receptor 3	AF262303|CCR3|1232|chemokine (C-C motif) receptor 3	AF262304|CCR3|1232|chemokine (C-C motif) receptor 3	BC130318|CCR3|1232|chemokine (C-C motif) receptor 3	BC130320|CCR3|1232|chemokine (C-C motif) receptor 3	BC110297|CCR3|1232|chemokine (C-C motif) receptor 3
hg18_v1_chr12_-_6611075_6611078	0.0202655	SOX2.p2	NM_001142961|LPAR5|57121|lysophosphatidic acid receptor 5
hg18_v1_chr16_+_66433712_66433720	0.0202576	SOX2.p2	NM_020457|THAP11|57215|THAP domain containing 11
hg18_v1_chr1_-_84237316_84237453	0.0202496	SOX2.p2	AK126792|TTLL7|79739|tubulin tyrosine ligase-like family, member 7	BC048970|TTLL7|79739|tubulin tyrosine ligase-like family, member 7	BC032829|TTLL7|79739|tubulin tyrosine ligase-like family, member 7	BC060878|TTLL7|79739|tubulin tyrosine ligase-like family, member 7	BC028350|TTLL7|79739|tubulin tyrosine ligase-like family, member 7	NM_024686|TTLL7|79739|tubulin tyrosine ligase-like family, member 7
hg18_v1_chr19_-_42393225_42393290	0.0202255	SOX2.p2	BC051277|ZNF585B|92285|zinc finger protein 585B	BC067088|ZNF585B|92285|zinc finger protein 585B	BC080550|ZNF585B|92285|zinc finger protein 585B	AY147015|ZNF585B|92285|zinc finger protein 585B	NM_152279|ZNF585B|92285|zinc finger protein 585B
hg18_v1_chr11_+_89458765_89458765	0.0200483	SOX2.p2	NM_001143975|UBTFL1|642623|upstream binding transcription factor, RNA polymerase I-like 1
hg18_v1_chrX_+_150614385_150614385	0.0200361	SOX2.p2	NM_024082|PRRG3|79057|proline rich Gla (G-carboxyglutamic acid) 3 (transmembrane)
hg18_v1_chr15_+_38240555_38240713	0.0200133	SOX2.p2	AK296984|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AF107297|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	BC018739|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AF046918|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AB208782|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AF035933|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AF068760|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AF046079|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)
hg18_v1_chr6_-_105957651_105957651	0.0200051	SOX2.p2	BC030636|PREP|5550|prolyl endopeptidase
hg18_v1_chr14_-_22521544_22521687	0.0199791	SOX2.p2	BC034968|JUB|84962|jub, ajuba homolog (Xenopus laevis)	NM_032876|JUB|84962|jub, ajuba homolog (Xenopus laevis)
hg18_v1_chr9_-_122382079_122382270	0.0199734	SOX2.p2	BC136275|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	BC143732|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	BC143734|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	BC143753|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	BC143755|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	BC143760|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	BC143762|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	BC143764|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	AF448860|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	AB046853|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	BC146782|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	BC019577|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	BX537421|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	AL833481|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	BX537759|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	AK122913|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	BX537708|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	NM_001011649|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	NM_018249|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2
hg18_v1_chr10_-_44775142_44775164	0.0199701	SOX2.p2	AK056518|LOC220980|220980|hypothetical LOC220980
hg18_v1_chr6_+_43257903_43257928	0.0198671	SOX2.p2	BC028159|CUL9|23113|cullin 9
hg18_v1_chr5_+_65258139_65258193	0.0198627	SOX2.p2	AF263744|ERBB2IP|55914|erbb2 interacting protein	NM_001006600|ERBB2IP|55914|erbb2 interacting protein	NM_018695|ERBB2IP|55914|erbb2 interacting protein	AK295708|ERBB2IP|55914|erbb2 interacting protein	AK304693|ERBB2IP|55914|erbb2 interacting protein
hg18_v1_chr1_+_157676135_157676172	0.019835	SOX2.p2	BC112290|OR10J1|26476|olfactory receptor, family 10, subfamily J, member 1	BC112292|OR10J1|26476|olfactory receptor, family 10, subfamily J, member 1	NM_012351|OR10J1|26476|olfactory receptor, family 10, subfamily J, member 1	BC069150|OR10J1|26476|olfactory receptor, family 10, subfamily J, member 1
hg18_v1_chr1_+_234625338_234625552	0.019725	SOX2.p2	AK096339|EDARADD|128178|EDAR-associated death domain	NM_080738|EDARADD|128178|EDAR-associated death domain	AY028914|EDARADD|128178|EDAR-associated death domain	AK291930|EDARADD|128178|EDAR-associated death domain	BC006533|EDARADD|128178|EDAR-associated death domain	AY071862|EDARADD|128178|EDAR-associated death domain
hg18_v1_chr17_+_25730107_25730124	0.0196826	SOX2.p2	NM_001304|CPD|1362|carboxypeptidase D	U65090|CPD|1362|carboxypeptidase D
hg18_v1_chr6_+_3204133_3204182	0.0196719	SOX2.p2	NM_001128591|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4	NM_001128592|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4	NM_001135750|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4
hg18_v1_chr5_-_11956964_11957109	0.0196126	SOX2.p2	U96136|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)	EU328348|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)	AB013805|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)	NM_001332|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)
hg18_v1_chr12_+_102859354_102859421	0.0195908	SOX2.p2	CR606918|HSP90B1|7184|heat shock protein 90kDa beta (Grp94), member 1
hg18_v1_chr19_+_977271_977327	0.0195661	SOX2.p2	NM_004368|CNN2|1265|calponin 2	NM_201277|CNN2|1265|calponin 2
hg18_v1_chr1_-_233558117_233558154	0.0195358	SOX2.p2	AF214114|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)	AK057552|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)	NM_016374|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)	NM_031371|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)
hg18_v1_chrX_-_73751152_73751154	0.0195284	SOX2.p2	
hg18_v1_chr5_-_134763464_134763480	0.0194632	SOX2.p2	BC013331|H2AFY|9555|H2A histone family, member Y	AF054174|H2AFY|9555|H2A histone family, member Y	NM_004893|H2AFY|9555|H2A histone family, member Y
hg18_v1_chr2_-_38683518_38683571	0.0194598	SOX2.p2	AY236963|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like	BC017480|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like	AK291462|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like
hg18_v1_chr8_+_61592105_61592132	0.0192919	SOX2.p2	NM_002865|RAB2A|5862|RAB2A, member RAS oncogene family	X12953|RAB2A|5862|RAB2A, member RAS oncogene family	BC008929|RAB2A|5862|RAB2A, member RAS oncogene family
hg18_v1_chr2_-_55131096_55131118	0.0192904	SOX2.p2	AK129806|RTN4|57142|reticulon 4	AF132047|RTN4|57142|reticulon 4
hg18_v1_chrX_-_16798096_16798360	0.0192899	SOX2.p2	CR541701|RBBP7|5931|retinoblastoma binding protein 7	AK291567|RBBP7|5931|retinoblastoma binding protein 7	CR611848|RBBP7|5931|retinoblastoma binding protein 7	CR620066|RBBP7|5931|retinoblastoma binding protein 7	CR624515|RBBP7|5931|retinoblastoma binding protein 7	CR596205|RBBP7|5931|retinoblastoma binding protein 7	BC114500|RBBP7|5931|retinoblastoma binding protein 7	BC114501|RBBP7|5931|retinoblastoma binding protein 7	U35143|RBBP7|5931|retinoblastoma binding protein 7	CR615058|RBBP7|5931|retinoblastoma binding protein 7	CR592155|RBBP7|5931|retinoblastoma binding protein 7
hg18_v1_chr7_+_120416103_120416161	0.019252	SOX2.p2	AL832638|C7orf58|79974|chromosome 7 open reading frame 58
hg18_v1_chr7_-_127833231_127833275	0.01922	SOX2.p2	AK054640|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1	AK293413|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1	AK297943|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1	NM_001142573|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1	NM_001142574|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1	NM_001142575|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1
hg18_v1_chr20_+_41519882_41519930	0.0191294	SOX2.p2	NM_006275|SRSF6|6431|serine/arginine-rich splicing factor 6
hg18_v1_chr5_+_126140718_126140743	0.0191225	SOX2.p2	BC103723|LMNB1|4001|lamin B1	AK303084|LMNB1|4001|lamin B1	NM_001198557|LMNB1|4001|lamin B1
hg18_v1_chr16_+_75790849_75790876	0.0190967	SOX2.p2	NM_001129979|SYCE1L|100130958|synaptonemal complex central element protein 1-like
hg18_v1_chr1_-_198645455_198645609	0.0190328	SOX2.p2	AF125158|ZNF281|23528|zinc finger protein 281	BC051905|ZNF281|23528|zinc finger protein 281
hg18_v1_chr16_-_73857214_73857439	0.018971	SOX2.p2	AK302617|BCAR1|9564|breast cancer anti-estrogen resistance 1	NM_001170720|BCAR1|9564|breast cancer anti-estrogen resistance 1	AK027608|BCAR1|9564|breast cancer anti-estrogen resistance 1	AK293808|BCAR1|9564|breast cancer anti-estrogen resistance 1	NM_001170714|BCAR1|9564|breast cancer anti-estrogen resistance 1	NM_001170718|BCAR1|9564|breast cancer anti-estrogen resistance 1
hg18_v1_chr12_-_18134319_18134380	0.0189627	SOX2.p2	AK026308|RERGL|79785|RERG/RAS-like	CR618874|RERGL|79785|RERG/RAS-like	BC042888|RERGL|79785|RERG/RAS-like	NM_024730|RERGL|79785|RERG/RAS-like
hg18_v1_chr16_+_31401939_31401939	0.0189469	SOX2.p2	BC131542|SLC5A2|6524|solute carrier family 5 (sodium/glucose cotransporter), member 2	M95549|SLC5A2|6524|solute carrier family 5 (sodium/glucose cotransporter), member 2	NM_003041|SLC5A2|6524|solute carrier family 5 (sodium/glucose cotransporter), member 2
hg18_v1_chr15_+_61583826_61583845	0.0189148	SOX2.p2	AK314223|USP3|9960|ubiquitin specific peptidase 3
hg18_v1_chr5_+_138117017_138117044	0.0188825	SOX2.p2	AK094151|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	D13866|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	BC000385|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	AK304267|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa
hg18_v1_chr17_-_36113502_36113527	0.0188621	SOX2.p2	BC111964|KRT24|192666|keratin 24	BC111968|KRT24|192666|keratin 24	CR607026|KRT24|192666|keratin 24	AK000268|KRT24|192666|keratin 24	NM_019016|KRT24|192666|keratin 24
hg18_v1_chr19_+_46462189_46462367	0.0187864	SOX2.p2	BC014232|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	BC027713|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	BC004242|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	EU831487|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	EU831574|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1
hg18_v1_chr11_-_64301807_64301807	0.0187863	SOX2.p2	AK293753|SF1|7536|splicing factor 1	NM_001178031|SF1|7536|splicing factor 1
hg18_v1_chr3_+_185516630_185516672	0.0187495	SOX2.p2	AF002816|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AF104913|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AK294567|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1
hg18_v1_chr1_+_47674275_47674275	0.0187328	SOX2.p2	AF042832|FOXD2|2306|forkhead box D2	NM_004474|FOXD2|2306|forkhead box D2
hg18_v1_chr1_+_113417387_113417551	0.0187145	SOX2.p2	BC117368|LRIG2|9860|leucine-rich repeats and immunoglobulin-like domains 2	BC117370|LRIG2|9860|leucine-rich repeats and immunoglobulin-like domains 2
hg18_v1_chr12_-_121551349_121551411	0.0186773	SOX2.p2	BC065918|ZCCHC8|55596|zinc finger, CCHC domain containing 8
hg18_v1_chr3_-_187138500_187138518	0.0186587	SOX2.p2	AK098191|TRA2B|6434|transformer 2 beta homolog (Drosophila)
hg18_v1_chr11_-_56101772_56101838	0.0186572	SOX2.p2	NM_001004741|OR5M10|390167|olfactory receptor, family 5, subfamily M, member 10	BC140733|OR5M10|390167|olfactory receptor, family 5, subfamily M, member 10
hg18_v1_chr12_+_55808696_55808765	0.0186304	SOX2.p2	BC045107|LRP1|4035|low density lipoprotein receptor-related protein 1
hg18_v1_chr15_+_38240501_38240542	0.0186185	SOX2.p2	NM_001211|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AF053306|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AK296795|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AK312709|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)
hg18_v1_chrX_+_41078787_41078831	0.0185951	SOX2.p2	AK304661|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AK127902|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked
hg18_v1_chr20_+_1194959_1194998	0.018501	SOX2.p2	BC035788|SNPH|9751|syntaphilin	NM_014723|SNPH|9751|syntaphilin	AB002372|SNPH|9751|syntaphilin	AF187733|SNPH|9751|syntaphilin
hg18_v1_chr16_-_3870686_3870712	0.0184844	SOX2.p2	U47741|CREBBP|1387|CREB binding protein
hg18_v1_chr5_+_79651545_79651598	0.0184645	SOX2.p2	NM_032567|SPZ1|84654|spermatogenic leucine zipper 1	AK098575|SPZ1|84654|spermatogenic leucine zipper 1	AK314007|SPZ1|84654|spermatogenic leucine zipper 1	AF333098|SPZ1|84654|spermatogenic leucine zipper 1	BC033798|SPZ1|84654|spermatogenic leucine zipper 1
hg18_v1_chr1_-_153445592_153445610	0.018437	SOX2.p2	AK311031|THBS3|7059|thrombospondin 3
hg18_v1_chr6_-_30748597_30748759	0.0184019	SOX2.p2	DQ895906|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16	BC002789|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16	AB001601|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16	AK312264|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16	BC008825|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16	BC009392|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16
hg18_v1_chr5_-_156502363_156502498	0.0183615	SOX2.p2	NM_001100816|MED7|9443|mediator complex subunit 7	AF031383|MED7|9443|mediator complex subunit 7	CR617029|MED7|9443|mediator complex subunit 7	BC005250|MED7|9443|mediator complex subunit 7	BC006968|MED7|9443|mediator complex subunit 7	AK308393|MED7|9443|mediator complex subunit 7	NM_004270|MED7|9443|mediator complex subunit 7
hg18_v1_chr5_-_43349338_43349369	0.0183549	SOX2.p2	NM_001098272|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)	NM_002130|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)
hg18_v1_chr10_-_61336190_61336224	0.0183367	SOX2.p2	S72869|CCDC6|8030|coiled-coil domain containing 6
hg18_v1_chr9_+_83748234_83748293	0.0183354	SOX2.p2	NM_207416|FAM75D3|389762|family with sequence similarity 75, member D3
hg18_v1_chr5_-_111121150_111121364	0.0182647	SOX2.p2	NM_001142479|C5orf13|9315|chromosome 5 open reading frame 13	NM_001142480|C5orf13|9315|chromosome 5 open reading frame 13	CR611883|C5orf13|9315|chromosome 5 open reading frame 13	CR597011|C5orf13|9315|chromosome 5 open reading frame 13	BC011050|C5orf13|9315|chromosome 5 open reading frame 13	NM_001142478|C5orf13|9315|chromosome 5 open reading frame 13	CR607755|C5orf13|9315|chromosome 5 open reading frame 13
hg18_v1_chr6_-_33864876_33864881	0.0182177	SOX2.p2	CR606517|LEMD2|221496|LEM domain containing 2
hg18_v1_chr1_-_201422533_201422565	0.0181594	SOX2.p2	NM_001276|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)
hg18_v1_chr20_-_54534387_54534387	0.0181336	SOX2.p2	AK131203|GCNT7|140687|glucosaminyl (N-acetyl) transferase family member 7	NM_080615|GCNT7|140687|glucosaminyl (N-acetyl) transferase family member 7
hg18_v1_chr10_+_105716925_105716984	0.0181023	SOX2.p2	BC047885|SLK|9748|STE20-like kinase	BC064804|SLK|9748|STE20-like kinase	BC047762|SLK|9748|STE20-like kinase	BC036736|SLK|9748|STE20-like kinase	D86959|SLK|9748|STE20-like kinase
hg18_v1_chr12_-_55758840_55758848	0.0180693	SOX2.p2	NM_001130963|TMEM194A|23306|transmembrane protein 194A	NM_015257|TMEM194A|23306|transmembrane protein 194A
hg18_v1_chrX_+_119622012_119622119	0.0180623	SOX2.p2	BC001013|MCTS1|28985|malignant T cell amplified sequence 1	AY364258|MCTS1|28985|malignant T cell amplified sequence 1
hg18_v1_chr9_-_89939719_89939719	0.0180253	SOX2.p2	AK302448|FAM75C2|645961|family with sequence similarity 75, member C2	NM_001166137|FAM75C2|645961|family with sequence similarity 75, member C2
hg18_v1_chr18_-_21184824_21185468	0.0179812	SOX2.p2	
hg18_v1_chr19_-_60941551_60941579	0.017967	SOX2.p2	AY154464|NLRP9|338321|NLR family, pyrin domain containing 9	BC136583|NLRP9|338321|NLR family, pyrin domain containing 9	NM_176820|NLRP9|338321|NLR family, pyrin domain containing 9
hg18_v1_chr15_+_38923914_38924072	0.0179413	SOX2.p2	NM_001032367|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1	AK303899|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1	CR606886|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1	BC004140|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1	BT007425|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1	DQ890747|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1	DQ892293|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1	DQ895493|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1
hg18_v1_chr22_-_37382525_37382579	0.0178992	SOX2.p2	NM_001013647|LOC646851|646851|hypothetical LOC646851
hg18_v1_chr7_-_99612757_99612970	0.0177923	SOX2.p2	AM392909|GPC2|221914|glypican 2	DQ893325|GPC2|221914|glypican 2	DQ896641|GPC2|221914|glypican 2	AL834418|GPC2|221914|glypican 2	AK096281|GPC2|221914|glypican 2	BC027972|GPC2|221914|glypican 2	NM_152742|GPC2|221914|glypican 2	AY093588|GPC2|221914|glypican 2
hg18_v1_chr8_+_144838608_144838649	0.0177743	SOX2.p2	NM_001100598|ZNF707|286075|zinc finger protein 707	NM_001100599|ZNF707|286075|zinc finger protein 707	NM_173831|ZNF707|286075|zinc finger protein 707	AK001126|ZNF707|286075|zinc finger protein 707	AK290432|ZNF707|286075|zinc finger protein 707	AK055198|ZNF707|286075|zinc finger protein 707	AK055263|ZNF707|286075|zinc finger protein 707	BC014894|ZNF707|286075|zinc finger protein 707
hg18_v1_chr4_+_154397975_154398004	0.0177597	SOX2.p2	BC025417|TRIM2|23321|tripartite motif containing 2
hg18_v1_chrX_+_24621964_24621978	0.017759	SOX2.p2	BX648513|POLA1|5422|polymerase (DNA directed), alpha 1, catalytic subunit
hg18_v1_chr5_+_94916533_94916738	0.017741	SOX2.p2	AK303855|ARSK|153642|arylsulfatase family, member K	AK316253|ARSK|153642|arylsulfatase family, member K	NM_198150|ARSK|153642|arylsulfatase family, member K	AY358596|ARSK|153642|arylsulfatase family, member K	BC050392|ARSK|153642|arylsulfatase family, member K	BC130329|ARSK|153642|arylsulfatase family, member K	BC144160|ARSK|153642|arylsulfatase family, member K	BC144161|ARSK|153642|arylsulfatase family, member K	BC036047|ARSK|153642|arylsulfatase family, member K	AY875939|ARSK|153642|arylsulfatase family, member K
hg18_v1_chr15_-_68177283_68177312	0.0177217	SOX2.p2	BC012004|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	AB046767|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	AK315058|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	BC043247|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	NM_001105192|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	NM_005078|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	NM_020908|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)
hg18_v1_chr5_-_149772563_149772724	0.0177015	SOX2.p2	CR590167|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain
hg18_v1_chrX_-_114999449_114999485	0.0176955	SOX2.p2	BC003645|LOC642776|642776|hypothetical LOC642776
hg18_v1_chr2_-_136311219_136311219	0.0176898	SOX2.p2	NM_002299|LCT|3938|lactase	X07994|LCT|3938|lactase
hg18_v1_chr19_+_977608_977612	0.0176767	SOX2.p2	AK126391|CNN2|1265|calponin 2
hg18_v1_chr7_+_2565202_2565229	0.0176534	SOX2.p2	AK309646|IQCE|23288|IQ motif containing E	BC043150|IQCE|23288|IQ motif containing E
hg18_v1_chr2_-_37752731_37753056	0.0175685	SOX2.p2	AL136842|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3	NM_006449|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3
hg18_v1_chrX_-_10548458_10548673	0.0175104	SOX2.p2	AF230976|MID1|4281|midline 1 (Opitz/BBB syndrome)	AF230977|MID1|4281|midline 1 (Opitz/BBB syndrome)	Y13667|MID1|4281|midline 1 (Opitz/BBB syndrome)	AK226104|MID1|4281|midline 1 (Opitz/BBB syndrome)	AK315095|MID1|4281|midline 1 (Opitz/BBB syndrome)	BC053626|MID1|4281|midline 1 (Opitz/BBB syndrome)	AK291215|MID1|4281|midline 1 (Opitz/BBB syndrome)	AY112901|MID1|4281|midline 1 (Opitz/BBB syndrome)	AK297205|MID1|4281|midline 1 (Opitz/BBB syndrome)	NM_000381|MID1|4281|midline 1 (Opitz/BBB syndrome)	NM_033289|MID1|4281|midline 1 (Opitz/BBB syndrome)
hg18_v1_chr2_+_208284691_208284800	0.0174816	SOX2.p2	BC067253|CCNYL1|151195|cyclin Y-like 1
hg18_v1_chr1_+_183392991_183393047	0.0174587	SOX2.p2	AK291443|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)
hg18_v1_chr11_+_55554470_55554470	0.0174432	SOX2.p2	NM_001001921|OR5AS1|219447|olfactory receptor, family 5, subfamily AS, member 1
hg18_v1_chr3_+_48388712_48388768	0.0174283	SOX2.p2	AY247969|FBXW12|285231|F-box and WD repeat domain containing 12	NM_001159927|FBXW12|285231|F-box and WD repeat domain containing 12	NM_001159929|FBXW12|285231|F-box and WD repeat domain containing 12	NM_207102|FBXW12|285231|F-box and WD repeat domain containing 12	BC101303|FBXW12|285231|F-box and WD repeat domain containing 12	BC101304|FBXW12|285231|F-box and WD repeat domain containing 12	BC101305|FBXW12|285231|F-box and WD repeat domain containing 12	BC101306|FBXW12|285231|F-box and WD repeat domain containing 12
hg18_v1_chr3_+_161040343_161040432	0.0174143	SOX2.p2	NM_001197109|SCHIP1|29970|schwannomin interacting protein 1	AK091871|SCHIP1|29970|schwannomin interacting protein 1
hg18_v1_chr16_+_30326077_30326235	0.0173865	SOX2.p2	AK313930|ZNF771|51333|zinc finger protein 771	NM_001142305|ZNF771|51333|zinc finger protein 771	NM_016643|ZNF771|51333|zinc finger protein 771
hg18_v1_chr10_+_85889164_85889311	0.0173767	SOX2.p2	NM_014394|GHITM|27069|growth hormone inducible transmembrane protein	AK299937|GHITM|27069|growth hormone inducible transmembrane protein	AF078863|GHITM|27069|growth hormone inducible transmembrane protein	AF131820|GHITM|27069|growth hormone inducible transmembrane protein	AL136713|GHITM|27069|growth hormone inducible transmembrane protein	AF161400|GHITM|27069|growth hormone inducible transmembrane protein	AK130094|GHITM|27069|growth hormone inducible transmembrane protein	CR613304|GHITM|27069|growth hormone inducible transmembrane protein	CR618105|GHITM|27069|growth hormone inducible transmembrane protein	BC022872|GHITM|27069|growth hormone inducible transmembrane protein	AK225318|GHITM|27069|growth hormone inducible transmembrane protein	AF060923|GHITM|27069|growth hormone inducible transmembrane protein	AK098770|GHITM|27069|growth hormone inducible transmembrane protein	AK298332|GHITM|27069|growth hormone inducible transmembrane protein	BC010354|GHITM|27069|growth hormone inducible transmembrane protein	AK130097|GHITM|27069|growth hormone inducible transmembrane protein	AK297960|GHITM|27069|growth hormone inducible transmembrane protein	AK292864|GHITM|27069|growth hormone inducible transmembrane protein	AY358824|GHITM|27069|growth hormone inducible transmembrane protein	CR607970|GHITM|27069|growth hormone inducible transmembrane protein
hg18_v1_chr22_-_35233032_35233095	0.0173621	SOX2.p2	AK025714|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2	AK225347|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2	AK315555|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2	NM_024955|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2	BC040351|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2	NM_001102371|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2
hg18_v1_chr5_+_125786717_125786767	0.0173419	SOX2.p2	NM_001146320|GRAMD3|65983|GRAM domain containing 3	NM_001146321|GRAMD3|65983|GRAM domain containing 3	NM_023927|GRAMD3|65983|GRAM domain containing 3
hg18_v1_chrX_-_119487164_119487182	0.0173196	SOX2.p2	CR606114|LAMP2|3920|lysosomal-associated membrane protein 2	AK291090|LAMP2|3920|lysosomal-associated membrane protein 2	AK293931|LAMP2|3920|lysosomal-associated membrane protein 2
hg18_v1_chr10_+_102749597_102749676	0.0173191	SOX2.p2	BC058938|LZTS2|84445|leucine zipper, putative tumor suppressor 2
hg18_v1_chr1_-_223683141_223683141	0.0172533	SOX2.p2	NM_194442|LBR|3930|lamin B receptor
hg18_v1_chr15_-_97607108_97607350	0.0172418	SOX2.p2	BC015728|TTC23|64927|tetratricopeptide repeat domain 23	AF411456|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040655|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040656|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040657|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040658|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040659|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040660|TTC23|64927|tetratricopeptide repeat domain 23	NM_022905|TTC23|64927|tetratricopeptide repeat domain 23
hg18_v1_chr2_+_66516020_66516035	0.0172409	SOX2.p2	AL832770|MEIS1|4211|Meis homeobox 1	BC043503|MEIS1|4211|Meis homeobox 1	NM_002398|MEIS1|4211|Meis homeobox 1
hg18_v1_chr2_-_113310796_113310835	0.0172387	SOX2.p2	X56087|IL1B|3553|interleukin 1, beta	X02532|IL1B|3553|interleukin 1, beta	K02770|IL1B|3553|interleukin 1, beta	M54933|IL1B|3553|interleukin 1, beta	AK313983|IL1B|3553|interleukin 1, beta	BC008678|IL1B|3553|interleukin 1, beta	M15330|IL1B|3553|interleukin 1, beta	NM_000576|IL1B|3553|interleukin 1, beta
hg18_v1_chr2_+_73973600_73973619	0.0172147	SOX2.p2	NM_001615|ACTG2|72|actin, gamma 2, smooth muscle, enteric
hg18_v1_chr2_-_153282104_153282229	0.0171696	SOX2.p2	U70667|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	AF049524|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	AF049528|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	BC000273|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	BC073138|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	BC011788|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	AF049523|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	AK298547|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	AK024810|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	BC029414|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	NM_017892|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)
hg18_v1_chr5_+_134237808_134238094	0.0171614	SOX2.p2	BC001615|TXNDC15|79770|thioredoxin domain containing 15	AK026278|TXNDC15|79770|thioredoxin domain containing 15	AK225454|TXNDC15|79770|thioredoxin domain containing 15	AK225462|TXNDC15|79770|thioredoxin domain containing 15	CR616649|TXNDC15|79770|thioredoxin domain containing 15	BC032568|TXNDC15|79770|thioredoxin domain containing 15	AK307529|TXNDC15|79770|thioredoxin domain containing 15	CR613338|TXNDC15|79770|thioredoxin domain containing 15	CR613370|TXNDC15|79770|thioredoxin domain containing 15	BX538131|TXNDC15|79770|thioredoxin domain containing 15	CR601239|TXNDC15|79770|thioredoxin domain containing 15	EU832512|TXNDC15|79770|thioredoxin domain containing 15	EU832593|TXNDC15|79770|thioredoxin domain containing 15
hg18_v1_chr19_+_1220244_1220366	0.017137	SOX2.p2	NM_001280|CIRBP|1153|cold inducible RNA binding protein	AK095781|CIRBP|1153|cold inducible RNA binding protein	AK304185|CIRBP|1153|cold inducible RNA binding protein	AK304470|CIRBP|1153|cold inducible RNA binding protein	AK311601|CIRBP|1153|cold inducible RNA binding protein	AK128423|CIRBP|1153|cold inducible RNA binding protein	AF021336|CIRBP|1153|cold inducible RNA binding protein	AK094781|CIRBP|1153|cold inducible RNA binding protein	CR613900|CIRBP|1153|cold inducible RNA binding protein	CR592824|CIRBP|1153|cold inducible RNA binding protein	CR606464|CIRBP|1153|cold inducible RNA binding protein	CR624441|CIRBP|1153|cold inducible RNA binding protein	CR593654|CIRBP|1153|cold inducible RNA binding protein	CR615208|CIRBP|1153|cold inducible RNA binding protein	CR612930|CIRBP|1153|cold inducible RNA binding protein	CR602241|CIRBP|1153|cold inducible RNA binding protein	D78134|CIRBP|1153|cold inducible RNA binding protein	CR613916|CIRBP|1153|cold inducible RNA binding protein	BC000901|CIRBP|1153|cold inducible RNA binding protein	CR597422|CIRBP|1153|cold inducible RNA binding protein	CR601213|CIRBP|1153|cold inducible RNA binding protein	CR618838|CIRBP|1153|cold inducible RNA binding protein	CR625198|CIRBP|1153|cold inducible RNA binding protein	CR601118|CIRBP|1153|cold inducible RNA binding protein	BC000403|CIRBP|1153|cold inducible RNA binding protein	CR618584|CIRBP|1153|cold inducible RNA binding protein
hg18_v1_chr11_-_73559507_73559926	0.0171351	SOX2.p2	AB231764|C2CD3|26005|C2 calcium-dependent domain containing 3	AK092089|C2CD3|26005|C2 calcium-dependent domain containing 3	NM_015531|C2CD3|26005|C2 calcium-dependent domain containing 3
hg18_v1_chr6_+_42639929_42640035	0.017091	SOX2.p2	AY061884|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2
hg18_v1_chr14_-_50068928_50069192	0.0170187	SOX2.p2	BC036013|MAP4K5|11183|mitogen-activated protein kinase kinase kinase kinase 5	NM_006575|MAP4K5|11183|mitogen-activated protein kinase kinase kinase kinase 5	NM_198794|MAP4K5|11183|mitogen-activated protein kinase kinase kinase kinase 5	U77129|MAP4K5|11183|mitogen-activated protein kinase kinase kinase kinase 5
hg18_v1_chr2_+_173129040_173129102	0.0170152	SOX2.p2	AK312700|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1	CR594556|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1	AK304388|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1	BC039158|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1
hg18_v1_chr8_-_18915443_18915690	0.0170123	SOX2.p2	AK091317|PSD3|23362|pleckstrin and Sec7 domain containing 3	NM_015310|PSD3|23362|pleckstrin and Sec7 domain containing 3
hg18_v1_chr16_+_24174374_24174376	0.0170069	SOX2.p2	BC037899|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3	AK095553|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3	NM_006539|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3
hg18_v1_chr21_+_16024157_16024235	0.0169608	SOX2.p2	AF170562|USP25|29761|ubiquitin specific peptidase 25	BC075792|USP25|29761|ubiquitin specific peptidase 25
hg18_v1_chr6_-_33276131_33276134	0.0169105	SOX2.p2	CR618812|RXRB|6257|retinoid X receptor, beta
hg18_v1_chr5_-_150517528_150517635	0.0168033	SOX2.p2	NM_001155|ANXA6|309|annexin A6
hg18_v1_chr19_-_22171592_22171592	0.0167984	SOX2.p2	NM_001001411|ZNF676|163223|zinc finger protein 676
hg18_v1_chrX_-_117003310_117003403	0.0167612	SOX2.p2	AK296324|KLHL13|90293|kelch-like 13 (Drosophila)	NM_001168299|KLHL13|90293|kelch-like 13 (Drosophila)
hg18_v1_chr15_-_89276657_89276824	0.0167465	SOX2.p2	CR625970|HDDC3|374659|HD domain containing 3	NM_198527|HDDC3|374659|HD domain containing 3	BC033794|HDDC3|374659|HD domain containing 3	AK057584|HDDC3|374659|HD domain containing 3
hg18_v1_chr8_-_30635207_30635350	0.0167395	SOX2.p2	S67861|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa	X63469|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa	CR606311|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa	BC030572|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa	CR626793|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa	BC001775|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa	NM_002095|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa	CR594329|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa	CR606679|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa
hg18_v1_chr16_+_79626817_79627211	0.0167142	SOX2.p2	CR624345|ATMIN|23300|ATM interactor	NM_015251|ATMIN|23300|ATM interactor	BC002701|ATMIN|23300|ATM interactor	AK290943|ATMIN|23300|ATM interactor
hg18_v1_chr22_-_18484695_18484730	0.0166956	SOX2.p2	BC017184|TRMT2A|27037|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	CR617494|TRMT2A|27037|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)
hg18_v1_chr10_+_4995453_4995576	0.0166864	SOX2.p2	NM_001353|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)
hg18_v1_chr8_+_17824790_17824816	0.0166495	SOX2.p2	BC065022|PCM1|5108|pericentriolar material 1	BC027477|PCM1|5108|pericentriolar material 1	BC140946|PCM1|5108|pericentriolar material 1
hg18_v1_chr6_-_53321545_53321652	0.0166301	SOX2.p2	AK125098|ELOVL5|60481|ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)	CR597148|ELOVL5|60481|ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)
hg18_v1_chr1_+_16639753_16639790	0.0166223	SOX2.p2	NM_001145277|NECAP2|55707|NECAP endocytosis associated 2	NM_001145278|NECAP2|55707|NECAP endocytosis associated 2	NM_018090|NECAP2|55707|NECAP endocytosis associated 2
hg18_v1_chr4_-_175680366_175680366	0.0166054	SOX2.p2	AK300524|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)	NM_000860|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)	NM_001145816|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)
hg18_v1_chr17_+_24944605_24944652	0.0165959	SOX2.p2	NM_152345|ANKRD13B|124930|ankyrin repeat domain 13B
hg18_v1_chr1_-_33275039_33275050	0.0165835	SOX2.p2	BC070127|AK2|204|adenylate kinase 2	BC090040|AK2|204|adenylate kinase 2	CR615469|AK2|204|adenylate kinase 2	CR616874|AK2|204|adenylate kinase 2	CR621972|AK2|204|adenylate kinase 2	U84371|AK2|204|adenylate kinase 2	CR616468|AK2|204|adenylate kinase 2	U39945|AK2|204|adenylate kinase 2	CR590067|AK2|204|adenylate kinase 2	CR594112|AK2|204|adenylate kinase 2	AY080899|AK2|204|adenylate kinase 2	CR609421|AK2|204|adenylate kinase 2	CR620027|AK2|204|adenylate kinase 2
hg18_v1_chr13_-_38510183_38510220	0.0165791	SOX2.p2	AK074360|C13orf23|80209|chromosome 13 open reading frame 23	AB107354|C13orf23|80209|chromosome 13 open reading frame 23
hg18_v1_chr14_+_74353417_74353490	0.0165368	SOX2.p2	BC023570|YLPM1|56252|YLP motif containing 1
hg18_v1_chr1_-_159369081_159369101	0.0165053	SOX2.p2	BC013910|DEDD|9191|death effector domain containing	NM_001039711|DEDD|9191|death effector domain containing	NM_032998|DEDD|9191|death effector domain containing
hg18_v1_chr16_-_47872973_47873029	0.016485	SOX2.p2	BC093692|CBLN1|869|cerebellin 1 precursor	BC093718|CBLN1|869|cerebellin 1 precursor
hg18_v1_chr8_+_26491507_26491687	0.0164672	SOX2.p2	U17279|DPYSL2|1808|dihydropyrimidinase-like 2
hg18_v1_chr11_-_780103_780125	0.0163999	SOX2.p2	BC034732|CEND1|51286|cell cycle exit and neuronal differentiation 1	AK074547|CEND1|51286|cell cycle exit and neuronal differentiation 1	AK312993|CEND1|51286|cell cycle exit and neuronal differentiation 1	NM_016564|CEND1|51286|cell cycle exit and neuronal differentiation 1
hg18_v1_chr17_-_17125214_17125313	0.0163917	SOX2.p2	CR613300|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	AK297706|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	AF031647|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	CR597915|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	CR590945|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	AF098109|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	CR602972|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	CR608585|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	CR595552|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	CR599192|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	CR617410|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	CR618089|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	CR619826|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	AK312476|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	CR622277|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	CR594817|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)
hg18_v1_chr5_+_55069601_55069665	0.0163501	SOX2.p2	NM_001142549|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	NM_001166533|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	NM_024415|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	BC030638|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	AK308300|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	AK292417|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	BC088362|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	BC047455|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4
hg18_v1_chr1_+_112740378_112740378	0.0163494	SOX2.p2	
hg18_v1_chr12_-_11313907_11313907	0.0163328	SOX2.p2	BC096209|PRB3|5544|proline-rich protein BstNI subfamily 3	BC096210|PRB3|5544|proline-rich protein BstNI subfamily 3	BC096211|PRB3|5544|proline-rich protein BstNI subfamily 3	BC096212|PRB3|5544|proline-rich protein BstNI subfamily 3	NM_006249|PRB3|5544|proline-rich protein BstNI subfamily 3
hg18_v1_chr13_+_47775888_47775897	0.0163253	SOX2.p2	BC040540|RB1|5925|retinoblastoma 1	BC039060|RB1|5925|retinoblastoma 1
hg18_v1_chr9_+_131637539_131637548	0.0163064	SOX2.p2	BC033669|USP20|10868|ubiquitin specific peptidase 20
hg18_v1_chr1_-_201422490_201422532	0.0162846	SOX2.p2	BC008568|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	AK312911|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)
hg18_v1_chr1_-_246804680_246804702	0.016283	SOX2.p2	NM_001001821|OR2T34|127068|olfactory receptor, family 2, subfamily T, member 34	BC136924|OR2T34|127068|olfactory receptor, family 2, subfamily T, member 34	BC136926|OR2T34|127068|olfactory receptor, family 2, subfamily T, member 34
hg18_v1_chr12_+_66328760_66329020	0.0162698	SOX2.p2	AK313937|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2	NM_003583|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2	NM_006482|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2	BC005809|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2	BC006375|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2	Y13493|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2
hg18_v1_chr17_+_40655060_40655226	0.0162639	SOX2.p2	AY278319|FMNL1|752|formin-like 1	NM_005892|FMNL1|752|formin-like 1	BC111564|FMNL1|752|formin-like 1
hg18_v1_chr8_+_23442413_23442524	0.0161381	SOX2.p2	AK074708|SLC25A37|51312|solute carrier family 25, member 37	AK223194|SLC25A37|51312|solute carrier family 25, member 37	AF223466|SLC25A37|51312|solute carrier family 25, member 37	AY032628|SLC25A37|51312|solute carrier family 25, member 37	CR592142|SLC25A37|51312|solute carrier family 25, member 37	BC015013|SLC25A37|51312|solute carrier family 25, member 37	AK075313|SLC25A37|51312|solute carrier family 25, member 37	AL833186|SLC25A37|51312|solute carrier family 25, member 37
hg18_v1_chr19_+_977624_977625	0.0161333	SOX2.p2	AK297774|CNN2|1265|calponin 2
hg18_v1_chr2_-_198007967_198007982	0.0161264	SOX2.p2	AF054284|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa	BC039020|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa	AF086296|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa	BC064335|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa
hg18_v1_chr15_+_46285789_46285790	0.0160927	SOX2.p2	NM_000338|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1	NM_001184832|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1	AK129998|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1	AK298312|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1
hg18_v1_chr2_+_87828718_87828750	0.0160791	SOX2.p2	BC022294|PLGLB2|5342|plasminogen-like B2	M93143|PLGLB2|5342|plasminogen-like B2	NM_002665|PLGLB2|5342|plasminogen-like B2	BC005379|PLGLB2|5342|plasminogen-like B2	NM_001032392|PLGLB1|5343|plasminogen-like B1	BC070296|PLGLB1|5343|plasminogen-like B1	BC109248|PLGLB1|5343|plasminogen-like B1	BC107767|PLGLB1|5343|plasminogen-like B1
hg18_v1_chr2_-_198008011_198008049	0.0160306	SOX2.p2	BC056155|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa	AK308122|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa	NM_001005526|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa	NM_012433|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa	AK294851|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa
hg18_v1_chr1_+_35623688_35623720	0.0160105	SOX2.p2	BX648067|ZMYM4|9202|zinc finger, MYM-type 4
hg18_v1_chr4_-_9727598_9727670	0.0160011	SOX2.p2	NM_005112|WDR1|9948|WD repeat domain 1	NM_017491|WDR1|9948|WD repeat domain 1
hg18_v1_chrX_-_16798363_16798381	0.015997	SOX2.p2	X72841|RBBP7|5931|retinoblastoma binding protein 7
hg18_v1_chr7_+_120415958_120416044	0.0159926	SOX2.p2	NM_024913|C7orf58|79974|chromosome 7 open reading frame 58	AK289978|C7orf58|79974|chromosome 7 open reading frame 58	AL832619|C7orf58|79974|chromosome 7 open reading frame 58
hg18_v1_chr1_-_27099515_27099522	0.0159678	SOX2.p2	EU832444|GPATCH3|63906|G patch domain containing 3	EU832527|GPATCH3|63906|G patch domain containing 3
hg18_v1_chr9_+_131637472_131637538	0.0159124	SOX2.p2	NM_001110303|USP20|10868|ubiquitin specific peptidase 20	NM_006676|USP20|10868|ubiquitin specific peptidase 20
hg18_v1_chr22_+_18485057_18485066	0.0158729	SOX2.p2	CR590513|RANBP1|5902|RAN binding protein 1
hg18_v1_chr7_+_74017015_74017018	0.0158213	SOX2.p2	BC147030|GATSL2|729438|GATS protein-like 2	BC147031|GATSL2|729438|GATS protein-like 2	NM_001145063|GATSL1|389523|GATS protein-like 1
hg18_v1_chr3_-_169295869_169296382	0.0158109	SOX2.p2	AK307718|GOLIM4|27333|golgi integral membrane protein 4	AK307557|GOLIM4|27333|golgi integral membrane protein 4	NM_014498|GOLIM4|27333|golgi integral membrane protein 4
hg18_v1_chr1_+_93317374_93317469	0.0158097	SOX2.p2	NM_001164391|MTF2|22823|metal response element binding transcription factor 2	NM_001164392|MTF2|22823|metal response element binding transcription factor 2	NM_001164393|MTF2|22823|metal response element binding transcription factor 2	NM_007358|MTF2|22823|metal response element binding transcription factor 2	CR599562|MTF2|22823|metal response element binding transcription factor 2	AK290318|MTF2|22823|metal response element binding transcription factor 2	AK302900|MTF2|22823|metal response element binding transcription factor 2	AJ010014|MTF2|22823|metal response element binding transcription factor 2	AK302776|MTF2|22823|metal response element binding transcription factor 2	AF086908|MTF2|22823|metal response element binding transcription factor 2	BC010013|MTF2|22823|metal response element binding transcription factor 2	CR594521|MTF2|22823|metal response element binding transcription factor 2	BC001897|MTF2|22823|metal response element binding transcription factor 2
hg18_v1_chr20_+_34635362_34635469	0.0157683	SOX2.p2	AK313919|TGIF2|60436|TGFB-induced factor homeobox 2	NM_021809|TGIF2|60436|TGFB-induced factor homeobox 2	AB042646|TGIF2|60436|TGFB-induced factor homeobox 2	BC006549|TGIF2|60436|TGFB-induced factor homeobox 2	BC012816|TGIF2|60436|TGFB-induced factor homeobox 2	AK074802|TGIF2|60436|TGFB-induced factor homeobox 2
hg18_v1_chr17_+_59032009_59032174	0.0157397	SOX2.p2	BC007744|TACO1|51204|translational activator of mitochondrially encoded cytochrome c oxidase I
hg18_v1_chr6_-_28294642_28294869	0.0157127	SOX2.p2	AK292767|LOC222699|222699|transducer of ERBB2, 2 pseudogene	BC050562|LOC222699|222699|transducer of ERBB2, 2 pseudogene	BC015543|LOC222699|222699|transducer of ERBB2, 2 pseudogene	BC039027|LOC222699|222699|transducer of ERBB2, 2 pseudogene
hg18_v1_chr15_+_89444185_89444242	0.0156944	SOX2.p2	NM_001167580|SV2B|9899|synaptic vesicle glycoprotein 2B	AK294902|SV2B|9899|synaptic vesicle glycoprotein 2B
hg18_v1_chr11_+_125730822_125730878	0.0156838	SOX2.p2	CR605032|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4
hg18_v1_chr15_-_32446537_32447207	0.0156685	SOX2.p2	AF529233|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	BC144236|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	CR617279|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	AK290273|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	AK308910|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	AL832237|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	BC092463|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	NM_153613|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	BC048430|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	AY734233|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	AF542964|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4
hg18_v1_chr18_+_12298242_12298289	0.0155947	SOX2.p2	AK022340|TUBB6|84617|tubulin, beta 6	AK098440|TUBB6|84617|tubulin, beta 6	AK304616|TUBB6|84617|tubulin, beta 6	BC002654|TUBB6|84617|tubulin, beta 6	CR607214|TUBB6|84617|tubulin, beta 6	NM_032525|TUBB6|84617|tubulin, beta 6	AK298196|TUBB6|84617|tubulin, beta 6	CR593665|TUBB6|84617|tubulin, beta 6	CR593961|TUBB6|84617|tubulin, beta 6	CR594370|TUBB6|84617|tubulin, beta 6	DQ893486|TUBB6|84617|tubulin, beta 6	DQ896394|TUBB6|84617|tubulin, beta 6
hg18_v1_chr9_-_113130533_113130533	0.0155913	SOX2.p2	BC111086|OR2K2|26248|olfactory receptor, family 2, subfamily K, member 2	NM_205859|OR2K2|26248|olfactory receptor, family 2, subfamily K, member 2
hg18_v1_chr13_+_47775887_47775887	0.0155835	SOX2.p2	AK299179|RB1|5925|retinoblastoma 1	AK307730|RB1|5925|retinoblastoma 1
hg18_v1_chr4_+_142361523_142361550	0.0155579	SOX2.p2	AK294089|ZNF330|27309|zinc finger protein 330	AK223609|ZNF330|27309|zinc finger protein 330	AK002106|ZNF330|27309|zinc finger protein 330	AJ006591|ZNF330|27309|zinc finger protein 330
hg18_v1_chr1_+_68070573_68070579	0.0155264	SOX2.p2	
hg18_v1_chr1_+_202031445_202031458	0.0155103	SOX2.p2	BC014268|ZC3H11A|9877|zinc finger CCCH-type containing 11A	BC038513|ZC3H11A|9877|zinc finger CCCH-type containing 11A
hg18_v1_chr6_-_90119158_90119160	0.015445	SOX2.p2	AK223464|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast)	AK300629|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast)
hg18_v1_chr10_-_32675848_32676089	0.0154118	SOX2.p2	AK092304|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)	AK309822|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)
hg18_v1_chr7_+_116238309_116238359	0.0153932	SOX2.p2	DQ655956|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2
hg18_v1_chrX_-_48743561_48743624	0.0153648	SOX2.p2	AB032993|GRIPAP1|56850|GRIP1 associated protein 1	AK292158|GRIPAP1|56850|GRIP1 associated protein 1	BC101544|GRIPAP1|56850|GRIP1 associated protein 1	BC101546|GRIPAP1|56850|GRIP1 associated protein 1	BX647801|GRIPAP1|56850|GRIP1 associated protein 1	BX647804|GRIPAP1|56850|GRIP1 associated protein 1	NM_020137|GRIPAP1|56850|GRIP1 associated protein 1	NM_207672|GRIPAP1|56850|GRIP1 associated protein 1
hg18_v1_chr19_+_977601_977605	0.0152973	SOX2.p2	CR592088|CNN2|1265|calponin 2	CR602855|CNN2|1265|calponin 2	CR607371|CNN2|1265|calponin 2
hg18_v1_chr10_+_112317401_112317563	0.0152776	SOX2.p2	NM_005445|SMC3|9126|structural maintenance of chromosomes 3	AK315845|SMC3|9126|structural maintenance of chromosomes 3	AK289771|SMC3|9126|structural maintenance of chromosomes 3	AF020043|SMC3|9126|structural maintenance of chromosomes 3	BC047324|SMC3|9126|structural maintenance of chromosomes 3
hg18_v1_chr1_+_202031373_202031421	0.0152766	SOX2.p2	NM_014827|ZC3H11A|9877|zinc finger CCCH-type containing 11A	CR627439|ZC3H11A|9877|zinc finger CCCH-type containing 11A	AK095858|ZC3H11A|9877|zinc finger CCCH-type containing 11A
hg18_v1_chr12_-_100748640_100748794	0.015244	SOX2.p2	AK056137|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	BC131787|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	BC071687|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	AY687932|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	BC002779|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	BC094884|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	AM085438|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	NM_024312|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits
hg18_v1_chr1_-_233558071_233558110	0.0152427	SOX2.p2	BC130418|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)	BC143719|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)	BC062536|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)	BX648820|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)
hg18_v1_chr1_-_233558114_233558115	0.0152402	SOX2.p2	BC048959|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)
hg18_v1_chr12_-_47868563_47868740	0.0152367	SOX2.p2	AK289483|TUBA1A|7846|tubulin, alpha 1a
hg18_v1_chr5_+_138705445_138705467	0.0152356	SOX2.p2	AK024552|PAIP2|51247|poly(A) binding protein interacting protein 2	AL136640|PAIP2|51247|poly(A) binding protein interacting protein 2	BC001716|PAIP2|51247|poly(A) binding protein interacting protein 2	CR592408|PAIP2|51247|poly(A) binding protein interacting protein 2	AF151052|PAIP2|51247|poly(A) binding protein interacting protein 2	CR611769|PAIP2|51247|poly(A) binding protein interacting protein 2	CR626771|PAIP2|51247|poly(A) binding protein interacting protein 2	CR600873|PAIP2|51247|poly(A) binding protein interacting protein 2
hg18_v1_chrX_+_119621771_119621862	0.0152237	SOX2.p2	NM_014060|MCTS1|28985|malignant T cell amplified sequence 1	AK311993|MCTS1|28985|malignant T cell amplified sequence 1	AB034206|MCTS1|28985|malignant T cell amplified sequence 1
hg18_v1_chr7_-_36730525_36730678	0.0152216	SOX2.p2	M62840|AOAH|313|acyloxyacyl hydrolase (neutrophil)	AK297016|AOAH|313|acyloxyacyl hydrolase (neutrophil)	AK308215|AOAH|313|acyloxyacyl hydrolase (neutrophil)	BC025698|AOAH|313|acyloxyacyl hydrolase (neutrophil)	AK223476|AOAH|313|acyloxyacyl hydrolase (neutrophil)	NM_001177506|AOAH|313|acyloxyacyl hydrolase (neutrophil)	NM_001177507|AOAH|313|acyloxyacyl hydrolase (neutrophil)	NM_001637|AOAH|313|acyloxyacyl hydrolase (neutrophil)
hg18_v1_chr6_+_42639714_42639742	0.0151504	SOX2.p2	NM_001184801|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2	NM_015255|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2
hg18_v1_chr18_+_53862744_53862821	0.0151162	SOX2.p2	AB071179|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like
hg18_v1_chr11_-_75769514_75769799	0.0150831	SOX2.p2	AF007393|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)	AF081567|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)	NM_004705|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)	AK291843|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)	BC117138|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)	BC117140|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)	BC110304|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)
hg18_v1_chrX_+_70420259_70420278	0.0150682	SOX2.p2	U02493|NONO|4841|non-POU domain containing, octamer-binding	U89867|NONO|4841|non-POU domain containing, octamer-binding
hg18_v1_chr10_+_4995685_4995695	0.0150195	SOX2.p2	D26124|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)
hg18_v1_chr6_+_43705254_43705286	0.0150142	SOX2.p2	CR624949|MAD2L1BP|9587|MAD2L1 binding protein	NM_001003690|MAD2L1BP|9587|MAD2L1 binding protein	CR595082|MAD2L1BP|9587|MAD2L1 binding protein
hg18_v1_chr12_-_51281482_51281588	0.014998	SOX2.p2	AK302016|KRT72|140807|keratin 72	AK093060|KRT72|140807|keratin 72	BC113686|KRT72|140807|keratin 72	AY033495|KRT72|140807|keratin 72	AK293645|KRT72|140807|keratin 72	NM_001146225|KRT72|140807|keratin 72	NM_001146226|KRT72|140807|keratin 72	NM_080747|KRT72|140807|keratin 72
hg18_v1_chr21_-_31175722_31175744	0.0149466	SOX2.p2	AB096963|KRTAP11-1|337880|keratin associated protein 11-1	BC130555|KRTAP11-1|337880|keratin associated protein 11-1	BC130557|KRTAP11-1|337880|keratin associated protein 11-1	AJ457065|KRTAP11-1|337880|keratin associated protein 11-1	NM_175858|KRTAP11-1|337880|keratin associated protein 11-1
hg18_v1_chr8_+_86344945_86344973	0.0149421	SOX2.p2	NM_198584|CA13|377677|carbonic anhydrase XIII
hg18_v1_chr9_-_131637361_131637380	0.0149292	SOX2.p2	AK057004|C9orf78|51759|chromosome 9 open reading frame 78	CR608293|C9orf78|51759|chromosome 9 open reading frame 78	AF151054|C9orf78|51759|chromosome 9 open reading frame 78
hg18_v1_chr13_+_51484517_51484561	0.0149239	SOX2.p2	NM_001004127|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	BC142998|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	AK296747|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	BC108677|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	BC111022|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	AK025456|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	BC143059|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	BC150316|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	CR602797|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)
hg18_v1_chr15_-_99276933_99277061	0.01489	SOX2.p2	
hg18_v1_chr8_+_17824781_17824789	0.0148684	SOX2.p2	BC000453|PCM1|5108|pericentriolar material 1
hg18_v1_chr10_+_13243553_13243595	0.0148369	SOX2.p2	NM_018518|MCM10|55388|minichromosome maintenance complex component 10	NM_182751|MCM10|55388|minichromosome maintenance complex component 10	AK292701|MCM10|55388|minichromosome maintenance complex component 10	AK055695|MCM10|55388|minichromosome maintenance complex component 10	BC101727|MCM10|55388|minichromosome maintenance complex component 10	AB042719|MCM10|55388|minichromosome maintenance complex component 10	AL136840|MCM10|55388|minichromosome maintenance complex component 10	BC143490|MCM10|55388|minichromosome maintenance complex component 10
hg18_v1_chr19_+_54299686_54299780	0.0148334	SOX2.p2	CR613069|SNRNP70|6625|small nuclear ribonucleoprotein 70kDa (U1)	X06814|SNRNP70|6625|small nuclear ribonucleoprotein 70kDa (U1)
hg18_v1_chr12_-_8656705_8656722	0.0147778	SOX2.p2	AB040431|AICDA|57379|activation-induced cytidine deaminase	BC006296|AICDA|57379|activation-induced cytidine deaminase	NM_020661|AICDA|57379|activation-induced cytidine deaminase	CR615215|AICDA|57379|activation-induced cytidine deaminase
hg18_v1_chrX_+_107174855_107174976	0.0147497	SOX2.p2	BX648658|VSIG1|340547|V-set and immunoglobulin domain containing 1	NM_001170553|VSIG1|340547|V-set and immunoglobulin domain containing 1	NM_182607|VSIG1|340547|V-set and immunoglobulin domain containing 1	AK301783|VSIG1|340547|V-set and immunoglobulin domain containing 1	BC043216|VSIG1|340547|V-set and immunoglobulin domain containing 1	BX640913|VSIG1|340547|V-set and immunoglobulin domain containing 1	AK315846|VSIG1|340547|V-set and immunoglobulin domain containing 1	AK301311|VSIG1|340547|V-set and immunoglobulin domain containing 1	AK292472|VSIG1|340547|V-set and immunoglobulin domain containing 1
hg18_v1_chr18_+_54013575_54013882	0.0146979	SOX2.p2	NM_001144970|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	AK294963|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	AY243318|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	AB007899|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like
hg18_v1_chr3_+_150028130_150028300	0.0146586	SOX2.p2	CR623808|CPB1|1360|carboxypeptidase B1 (tissue)	NM_001871|CPB1|1360|carboxypeptidase B1 (tissue)	M81057|CPB1|1360|carboxypeptidase B1 (tissue)	AK313940|CPB1|1360|carboxypeptidase B1 (tissue)	AJ224866|CPB1|1360|carboxypeptidase B1 (tissue)	BC015338|CPB1|1360|carboxypeptidase B1 (tissue)	DQ890547|CPB1|1360|carboxypeptidase B1 (tissue)	DQ893706|CPB1|1360|carboxypeptidase B1 (tissue)	BT009910|CPB1|1360|carboxypeptidase B1 (tissue)
hg18_v1_chr15_+_99276982_99277089	0.0146393	SOX2.p2	NM_024652|LRRK1|79705|leucine-rich repeat kinase 1	BC068080|LRRK1|79705|leucine-rich repeat kinase 1
hg18_v1_chr2_-_189752575_189752849	0.0146122	SOX2.p2	J04478|COL5A2|1290|collagen, type V, alpha 2	Y14690|COL5A2|1290|collagen, type V, alpha 2	AB209045|COL5A2|1290|collagen, type V, alpha 2	BC086874|COL5A2|1290|collagen, type V, alpha 2	AK297936|COL5A2|1290|collagen, type V, alpha 2	AK300146|COL5A2|1290|collagen, type V, alpha 2	NM_000393|COL5A2|1290|collagen, type V, alpha 2
hg18_v1_chr7_+_44802691_44802793	0.0145903	SOX2.p2	BC137057|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC137058|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	NM_021130|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	CR594762|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)
hg18_v1_chr14_+_64041170_64041223	0.0145797	SOX2.p2	AB023214|ZBTB1|22890|zinc finger and BTB domain containing 1
hg18_v1_chr11_+_48194937_48194937	0.0145577	SOX2.p2	NM_001005470|OR4B1|119765|olfactory receptor, family 4, subfamily B, member 1
hg18_v1_chr15_+_76517532_76517621	0.014554	SOX2.p2	NM_004136|IREB2|3658|iron-responsive element binding protein 2
hg18_v1_chr3_+_198961020_198961158	0.0145528	SOX2.p2	BC035006|FYTTD1|84248|forty-two-three domain containing 1	NM_032288|FYTTD1|84248|forty-two-three domain containing 1	BC039734|FYTTD1|84248|forty-two-three domain containing 1	AK027672|FYTTD1|84248|forty-two-three domain containing 1
hg18_v1_chr11_+_3786341_3786399	0.0145261	SOX2.p2	NM_014489|PGAP2|27315|post-GPI attachment to proteins 2	AF159615|PGAP2|27315|post-GPI attachment to proteins 2	CR626434|PGAP2|27315|post-GPI attachment to proteins 2
hg18_v1_chr3_+_57969127_57969247	0.014484	SOX2.p2	AF043045|FLNB|2317|filamin B, beta	NM_001164317|FLNB|2317|filamin B, beta	NM_001164318|FLNB|2317|filamin B, beta	NM_001164319|FLNB|2317|filamin B, beta	NM_001457|FLNB|2317|filamin B, beta	AB371580|FLNB|2317|filamin B, beta	AB191258|FLNB|2317|filamin B, beta	AB371581|FLNB|2317|filamin B, beta	AB371582|FLNB|2317|filamin B, beta	AF042166|FLNB|2317|filamin B, beta
hg18_v1_chr17_+_77261477_77261501	0.0144638	SOX2.p2	AF260566|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate	DQ892551|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate	DQ895762|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate	BT009754|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate
hg18_v1_chr8_+_61753912_61754132	0.014434	SOX2.p2	BC053890|CHD7|55636|chromodomain helicase DNA binding protein 7	BC110818|CHD7|55636|chromodomain helicase DNA binding protein 7	BC033116|CHD7|55636|chromodomain helicase DNA binding protein 7	BC041018|CHD7|55636|chromodomain helicase DNA binding protein 7	BC014681|CHD7|55636|chromodomain helicase DNA binding protein 7	CR602498|CHD7|55636|chromodomain helicase DNA binding protein 7
hg18_v1_chr14_-_44673408_44673417	0.0144111	SOX2.p2	BT006904|FKBP3|2287|FK506 binding protein 3, 25kDa	DQ890734|FKBP3|2287|FK506 binding protein 3, 25kDa	DQ891132|FKBP3|2287|FK506 binding protein 3, 25kDa	DQ893906|FKBP3|2287|FK506 binding protein 3, 25kDa	DQ894311|FKBP3|2287|FK506 binding protein 3, 25kDa	CR613618|FKBP3|2287|FK506 binding protein 3, 25kDa	CR599673|FKBP3|2287|FK506 binding protein 3, 25kDa	CR623899|FKBP3|2287|FK506 binding protein 3, 25kDa	CR610696|FKBP3|2287|FK506 binding protein 3, 25kDa
hg18_v1_chr7_+_2565238_2565308	0.0144048	SOX2.p2	AK092404|IQCE|23288|IQ motif containing E	BC061518|IQCE|23288|IQ motif containing E	AL136792|IQCE|23288|IQ motif containing E	AK293372|IQCE|23288|IQ motif containing E
hg18_v1_chr7_-_120285364_120285428	0.0143982	SOX2.p2	BC031265|TSPAN12|23554|tetraspanin 12	NM_012338|TSPAN12|23554|tetraspanin 12
hg18_v1_chr7_-_136678999_136679023	0.0143958	SOX2.p2	CR620419|PTN|5764|pleiotrophin
hg18_v1_chr15_-_63069280_63069318	0.014352	SOX2.p2	CR597831|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	AK301362|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	NM_001127890|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	NM_016630|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	CR601212|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)
hg18_v1_chr13_-_27092538_27092670	0.0143519	SOX2.p2	BC036755|LNX2|222484|ligand of numb-protein X 2
hg18_v1_chr6_+_41148869_41148938	0.0143443	SOX2.p2	BC039244|NFYA|4800|nuclear transcription factor Y, alpha
hg18_v1_chr19_-_14501048_14501121	0.0143414	SOX2.p2	AK301817|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1
hg18_v1_chrX_+_70438352_70438379	0.0143257	SOX2.p2	AF140690|ITGB1BP2|26548|integrin beta 1 binding protein (melusin) 2	NM_012278|ITGB1BP2|26548|integrin beta 1 binding protein (melusin) 2	BC108901|ITGB1BP2|26548|integrin beta 1 binding protein (melusin) 2	AF110225|ITGB1BP2|26548|integrin beta 1 binding protein (melusin) 2
hg18_v1_chr2_-_32118323_32118422	0.0143168	SOX2.p2	AF226998|DPY30|84661|dpy-30 homolog (C. elegans)	NM_032574|DPY30|84661|dpy-30 homolog (C. elegans)	BC015970|DPY30|84661|dpy-30 homolog (C. elegans)
hg18_v1_chr12_-_54996044_54996091	0.0143025	SOX2.p2	CR603286|CNPY2|10330|canopy 2 homolog (zebrafish)	CR596106|CNPY2|10330|canopy 2 homolog (zebrafish)	BC001027|CNPY2|10330|canopy 2 homolog (zebrafish)	AK312921|CNPY2|10330|canopy 2 homolog (zebrafish)
hg18_v1_chr3_-_110155237_110155366	0.0142952	SOX2.p2	AF110003|GUCA1C|9626|guanylate cyclase activator 1C	EU832759|GUCA1C|9626|guanylate cyclase activator 1C	GQ129299|GUCA1C|9626|guanylate cyclase activator 1C	AF110002|GUCA1C|9626|guanylate cyclase activator 1C	BC103993|GUCA1C|9626|guanylate cyclase activator 1C	BC103994|GUCA1C|9626|guanylate cyclase activator 1C	NM_005459|GUCA1C|9626|guanylate cyclase activator 1C
hg18_v1_chr4_+_76868830_76868849	0.0142881	SOX2.p2	AK314289|USO1|8615|USO1 vesicle docking protein homolog (yeast)
hg18_v1_chr5_+_179854029_179854099	0.0142853	SOX2.p2	AB033020|CNOT6|57472|CCR4-NOT transcription complex, subunit 6	BC152469|CNOT6|57472|CCR4-NOT transcription complex, subunit 6
hg18_v1_chr20_+_19985289_19985351	0.0142686	SOX2.p2	NM_001167816|C20orf26|26074|chromosome 20 open reading frame 26	AL117439|C20orf26|26074|chromosome 20 open reading frame 26
hg18_v1_chr4_-_124063167_124063255	0.0142591	SOX2.p2	DQ893139|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6	DQ896423|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6	BC009842|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6	AB209758|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6	NM_007083|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6	AK291871|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6	AF019633|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6
hg18_v1_chr2_-_170138558_170138669	0.0142531	SOX2.p2	AL832058|FASTKD1|79675|FAST kinase domains 1	AK074302|FASTKD1|79675|FAST kinase domains 1	BC017950|FASTKD1|79675|FAST kinase domains 1	AK055892|FASTKD1|79675|FAST kinase domains 1	AK130797|FASTKD1|79675|FAST kinase domains 1	BC035241|FASTKD1|79675|FAST kinase domains 1	NM_024622|FASTKD1|79675|FAST kinase domains 1
hg18_v1_chr4_-_103485600_103485715	0.014228	SOX2.p2	AF193052|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8	BC012125|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8	NM_001135146|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8
hg18_v1_chr3_-_45242624_45242801	0.0142088	SOX2.p2	AB078417|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)	AF438313|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)	BC057390|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)	CR593631|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)	CR615050|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)	CR591255|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)	CR621614|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)
hg18_v1_chr3_+_4510030_4510033	0.0141685	SOX2.p2	NM_001099952|ITPR1|3708|inositol 1,4,5-triphosphate receptor, type 1	NM_001168272|ITPR1|3708|inositol 1,4,5-triphosphate receptor, type 1	NM_002222|ITPR1|3708|inositol 1,4,5-triphosphate receptor, type 1	AK311008|ITPR1|3708|inositol 1,4,5-triphosphate receptor, type 1
hg18_v1_chr1_+_42920946_42921397	0.0141666	SOX2.p2	BC013838|YBX1|4904|Y box binding protein 1
hg18_v1_chr3_+_66527586_66527713	0.0141471	SOX2.p2	
hg18_v1_chr10_-_33264491_33264491	0.0141458	SOX2.p2	AM393197|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)	DQ891069|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)	DQ894251|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)	NM_033668|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)
hg18_v1_chr1_-_175400573_175400646	0.0141334	SOX2.p2	AK307820|ASTN1|460|astrotactin 1	AK295126|ASTN1|460|astrotactin 1	BC032870|ASTN1|460|astrotactin 1	BC049377|ASTN1|460|astrotactin 1	NM_004319|ASTN1|460|astrotactin 1	NM_207108|ASTN1|460|astrotactin 1
hg18_v1_chr6_-_52968035_52968138	0.014107	SOX2.p2	AK315369|GSTA4|2941|glutathione S-transferase alpha 4	CR599141|GSTA4|2941|glutathione S-transferase alpha 4	AF020918|GSTA4|2941|glutathione S-transferase alpha 4	AF025887|GSTA4|2941|glutathione S-transferase alpha 4	CR594939|GSTA4|2941|glutathione S-transferase alpha 4	CR625957|GSTA4|2941|glutathione S-transferase alpha 4	BC096817|GSTA4|2941|glutathione S-transferase alpha 4	NM_001512|GSTA4|2941|glutathione S-transferase alpha 4
hg18_v1_chr15_+_38648823_38649063	0.0140967	SOX2.p2	AK055971|RPUSD2|27079|RNA pseudouridylate synthase domain containing 2	AK301706|RPUSD2|27079|RNA pseudouridylate synthase domain containing 2	NM_152260|RPUSD2|27079|RNA pseudouridylate synthase domain containing 2	CR624718|RPUSD2|27079|RNA pseudouridylate synthase domain containing 2
hg18_v1_chr19_-_63722929_63722953	0.0140863	SOX2.p2	CR613426|ZBTB45|84878|zinc finger and BTB domain containing 45
hg18_v1_chr22_+_18485095_18485118	0.0140746	SOX2.p2	CR456556|RANBP1|5902|RAN binding protein 1
hg18_v1_chr2_-_159021201_159021510	0.0140575	SOX2.p2	BC105928|CCDC148|130940|coiled-coil domain containing 148	BC107596|CCDC148|130940|coiled-coil domain containing 148	BC107597|CCDC148|130940|coiled-coil domain containing 148	AK123220|CCDC148|130940|coiled-coil domain containing 148	AK058105|CCDC148|130940|coiled-coil domain containing 148	AF458588|CCDC148|130940|coiled-coil domain containing 148	BC015395|CCDC148|130940|coiled-coil domain containing 148	AK309246|CCDC148|130940|coiled-coil domain containing 148	AK308783|CCDC148|130940|coiled-coil domain containing 148	AK311042|CCDC148|130940|coiled-coil domain containing 148	NM_001171637|CCDC148|130940|coiled-coil domain containing 148	NM_138803|CCDC148|130940|coiled-coil domain containing 148
hg18_v1_chr1_-_17637639_17637658	0.0140378	SOX2.p2	BC053908|RCC2|55920|regulator of chromosome condensation 2	NM_001136204|RCC2|55920|regulator of chromosome condensation 2
hg18_v1_chr6_-_47385205_47385242	0.0139835	SOX2.p2	AF068868|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21	BT007420|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21	DQ890769|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21	DQ893930|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21	BC017730|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg18_v1_chr14_-_105657378_105657714	0.0139019	SOX2.p2	BC053984|IGHV4-31|28396|immunoglobulin heavy variable 4-31
hg18_v1_chr1_+_32777556_32777707	0.013893	SOX2.p2	AK074546|ZBTB8A|653121|zinc finger and BTB domain containing 8A	AY157873|ZBTB8A|653121|zinc finger and BTB domain containing 8A	BC015239|ZBTB8A|653121|zinc finger and BTB domain containing 8A
hg18_v1_chr1_-_23758871_23758908	0.013883	SOX2.p2	X69111|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	NM_002167|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein
hg18_v1_chr7_+_5904858_5904955	0.0138814	SOX2.p2	BC067810|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	NM_015622|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	BC132749|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	BC132751|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	AK292326|C7orf28B|221960|chromosome 7 open reading frame 28B	CR595861|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	BC010130|C7orf28B|221960|chromosome 7 open reading frame 28B	CR602854|C7orf28B|221960|chromosome 7 open reading frame 28B
hg18_v1_chr14_+_20048451_20048470	0.0138791	SOX2.p2	BC133002|RNASE10|338879|ribonuclease, RNase A family, 10 (non-active)	BC133028|RNASE10|338879|ribonuclease, RNase A family, 10 (non-active)	AY665805|RNASE10|338879|ribonuclease, RNase A family, 10 (non-active)	NM_001012975|RNASE10|338879|ribonuclease, RNase A family, 10 (non-active)
hg18_v1_chr15_+_97010219_97010339	0.0138245	SOX2.p2	NM_000875|IGF1R|3480|insulin-like growth factor 1 receptor	X04434|IGF1R|3480|insulin-like growth factor 1 receptor	BC113610|IGF1R|3480|insulin-like growth factor 1 receptor	BC113612|IGF1R|3480|insulin-like growth factor 1 receptor	BC143721|IGF1R|3480|insulin-like growth factor 1 receptor	EU826611|IGF1R|3480|insulin-like growth factor 1 receptor	EU826612|IGF1R|3480|insulin-like growth factor 1 receptor
hg18_v1_chr1_+_199975674_199975702	0.0138125	SOX2.p2	BC069250|NAV1|89796|neuron navigator 1
hg18_v1_chr14_-_105206106_105206249	0.0138005	SOX2.p2	
hg18_v1_chr3_-_57557906_57558115	0.0137961	SOX2.p2	AF493883|ARF4|378|ADP-ribosylation factor 4	DQ894082|ARF4|378|ADP-ribosylation factor 4	EU176202|ARF4|378|ADP-ribosylation factor 4	M36341|ARF4|378|ADP-ribosylation factor 4	CR591617|ARF4|378|ADP-ribosylation factor 4	CR611234|ARF4|378|ADP-ribosylation factor 4	CR595935|ARF4|378|ADP-ribosylation factor 4	CR597516|ARF4|378|ADP-ribosylation factor 4	CR607207|ARF4|378|ADP-ribosylation factor 4	CR611196|ARF4|378|ADP-ribosylation factor 4	CR622582|ARF4|378|ADP-ribosylation factor 4	U91920|ARF4|378|ADP-ribosylation factor 4	CR615713|ARF4|378|ADP-ribosylation factor 4	CR607867|ARF4|378|ADP-ribosylation factor 4	CR596585|ARF4|378|ADP-ribosylation factor 4	CR618819|ARF4|378|ADP-ribosylation factor 4	BC003364|ARF4|378|ADP-ribosylation factor 4	AK313008|ARF4|378|ADP-ribosylation factor 4
hg18_v1_chr6_-_136889436_136889544	0.0137683	SOX2.p2	AK296483|MAP7|9053|microtubule-associated protein 7	AK311270|MAP7|9053|microtubule-associated protein 7	NM_001198614|MAP7|9053|microtubule-associated protein 7	NM_001198618|MAP7|9053|microtubule-associated protein 7	AK311114|MAP7|9053|microtubule-associated protein 7	AK311236|MAP7|9053|microtubule-associated protein 7	AK316062|MAP7|9053|microtubule-associated protein 7	NM_001198619|MAP7|9053|microtubule-associated protein 7	AK311234|MAP7|9053|microtubule-associated protein 7
hg18_v1_chr5_+_156540425_156540565	0.0137571	SOX2.p2	AB209622|ITK|3702|IL2-inducible T-cell kinase	D13720|ITK|3702|IL2-inducible T-cell kinase	NM_005546|ITK|3702|IL2-inducible T-cell kinase	BC109077|ITK|3702|IL2-inducible T-cell kinase	BC109078|ITK|3702|IL2-inducible T-cell kinase	AK312846|ITK|3702|IL2-inducible T-cell kinase	AK303609|ITK|3702|IL2-inducible T-cell kinase
hg18_v1_chr1_+_20081510_20081590	0.0137432	SOX2.p2	
hg18_v1_chr22_-_16020076_16020152	0.0137195	SOX2.p2	CR610650|CECR5|27440|cat eye syndrome chromosome region, candidate 5	CR626647|CECR5|27440|cat eye syndrome chromosome region, candidate 5	CR598180|CECR5|27440|cat eye syndrome chromosome region, candidate 5	CR600657|CECR5|27440|cat eye syndrome chromosome region, candidate 5	AK001034|CECR5|27440|cat eye syndrome chromosome region, candidate 5	CR596430|CECR5|27440|cat eye syndrome chromosome region, candidate 5	CR622420|CECR5|27440|cat eye syndrome chromosome region, candidate 5	BC042540|CECR5|27440|cat eye syndrome chromosome region, candidate 5	CR612464|CECR5|27440|cat eye syndrome chromosome region, candidate 5
hg18_v1_chr2_+_181553333_181553608	0.0136502	SOX2.p2	NM_182678|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)	CR624412|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)	CR607535|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)	CR622410|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)	CR621773|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)	NM_006357|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)
hg18_v1_chr6_-_52549673_52549761	0.0136446	SOX2.p2	DQ891068|TRAM2|9697|translocation associated membrane protein 2	DQ894250|TRAM2|9697|translocation associated membrane protein 2	D31762|TRAM2|9697|translocation associated membrane protein 2
hg18_v1_chr16_-_70474912_70474944	0.0136442	SOX2.p2	AF070588|ZNF821|55565|zinc finger protein 821	NM_017530|ZNF821|55565|zinc finger protein 821	AK296603|ZNF821|55565|zinc finger protein 821
hg18_v1_chr6_-_33276347_33276415	0.013615	SOX2.p2	M84820|RXRB|6257|retinoid X receptor, beta	AB209244|RXRB|6257|retinoid X receptor, beta	X63522|RXRB|6257|retinoid X receptor, beta	AK225842|RXRB|6257|retinoid X receptor, beta	BC001167|RXRB|6257|retinoid X receptor, beta	NM_021976|RXRB|6257|retinoid X receptor, beta	AK295759|RXRB|6257|retinoid X receptor, beta
hg18_v1_chr17_-_3518654_3518721	0.0136093	SOX2.p2	AF028823|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	NM_014604|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3
hg18_v1_chr11_+_33236435_33236455	0.0134453	SOX2.p2	AK293009|HIPK3|10114|homeodomain interacting protein kinase 3
hg18_v1_chr2_-_45691887_45691936	0.0134242	SOX2.p2	AK056536|SRBD1|55133|S1 RNA binding domain 1	NM_018079|SRBD1|55133|S1 RNA binding domain 1
hg18_v1_chr1_-_203985780_203985850	0.0133967	SOX2.p2	AK025133|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1	AK225228|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1	AJ012584|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1
hg18_v1_chr19_+_18391423_18391457	0.0133655	SOX2.p2	
hg18_v1_chr4_-_139382672_139382956	0.0133533	SOX2.p2	AJ277882|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11	AB040875|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11	BC012087|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11	AK314855|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11	AF252872|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11	AB026891|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11	AF200708|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11	AK290359|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11	NM_014331|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11
hg18_v1_chr5_+_138116972_138117015	0.0133502	SOX2.p2	NM_001903|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	AK296708|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	AK300439|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	D14705|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa
hg18_v1_chr1_-_42549347_42549350	0.0133495	SOX2.p2	
hg18_v1_chr8_-_12657339_12657412	0.0133266	SOX2.p2	NM_152271|LONRF1|91694|LON peptidase N-terminal domain and ring finger 1
hg18_v1_chr1_-_44912649_44912700	0.0132838	SOX2.p2	CR457348|TMEM53|79639|transmembrane protein 53	AK026006|TMEM53|79639|transmembrane protein 53	AK225405|TMEM53|79639|transmembrane protein 53	BC064520|TMEM53|79639|transmembrane protein 53	NM_024587|TMEM53|79639|transmembrane protein 53	CR592706|TMEM53|79639|transmembrane protein 53	CR608781|TMEM53|79639|transmembrane protein 53	AL832539|TMEM53|79639|transmembrane protein 53
hg18_v1_chr7_-_156495985_156496130	0.0132583	SOX2.p2	AF107457|MNX1|3110|motor neuron and pancreas homeobox 1	NM_005515|MNX1|3110|motor neuron and pancreas homeobox 1	CR623223|MNX1|3110|motor neuron and pancreas homeobox 1
hg18_v1_chr13_+_33290254_33290315	0.0132382	SOX2.p2	AK296527|RFC3|5983|replication factor C (activator 1) 3, 38kDa	BC000149|RFC3|5983|replication factor C (activator 1) 3, 38kDa	AK222572|RFC3|5983|replication factor C (activator 1) 3, 38kDa	AK312544|RFC3|5983|replication factor C (activator 1) 3, 38kDa	L07541|RFC3|5983|replication factor C (activator 1) 3, 38kDa	DQ890955|RFC3|5983|replication factor C (activator 1) 3, 38kDa	DQ894118|RFC3|5983|replication factor C (activator 1) 3, 38kDa	BT019668|RFC3|5983|replication factor C (activator 1) 3, 38kDa
hg18_v1_chr21_-_45118026_45118036	0.0131966	SOX2.p2	BC012858|PTTG1IP|754|pituitary tumor-transforming 1 interacting protein	AK298557|PTTG1IP|754|pituitary tumor-transforming 1 interacting protein
hg18_v1_chr1_+_246178701_246178782	0.0131916	SOX2.p2	BC140751|OR2L8|391190|olfactory receptor, family 2, subfamily L, member 8	NM_001001963|OR2L8|391190|olfactory receptor, family 2, subfamily L, member 8
hg18_v1_chr10_-_50402148_50402364	0.0131647	SOX2.p2	BC028954|PGBD3|267004|piggyBac transposable element derived 3	AK074682|PGBD3|267004|piggyBac transposable element derived 3	BC063690|PGBD3|267004|piggyBac transposable element derived 3	NM_170753|PGBD3|267004|piggyBac transposable element derived 3
hg18_v1_chrX_+_46289871_46289906	0.0131383	SOX2.p2	BC034616|LOC401588|401588|hypothetical LOC401588	AK056314|LOC401588|401588|hypothetical LOC401588	CR619110|LOC401588|401588|hypothetical LOC401588
hg18_v1_chr19_+_977582_977598	0.0131327	SOX2.p2	AK295271|CNN2|1265|calponin 2	CR603928|CNN2|1265|calponin 2
hg18_v1_chr11_+_58146721_58146801	0.0130576	SOX2.p2	BC069167|CNTF|1270|ciliary neurotrophic factor	NM_000614|CNTF|1270|ciliary neurotrophic factor	BC068030|CNTF|1270|ciliary neurotrophic factor	AK314118|CNTF|1270|ciliary neurotrophic factor	BC074963|CNTF|1270|ciliary neurotrophic factor	BC074964|CNTF|1270|ciliary neurotrophic factor	S72921|CNTF|1270|ciliary neurotrophic factor
hg18_v1_chr14_+_51525942_51526067	0.013044	SOX2.p2	AF087877|C14orf166|51637|chromosome 14 open reading frame 166	AF100755|C14orf166|51637|chromosome 14 open reading frame 166	AF151857|C14orf166|51637|chromosome 14 open reading frame 166	DQ525179|C14orf166|51637|chromosome 14 open reading frame 166	NM_016039|C14orf166|51637|chromosome 14 open reading frame 166	AK312004|C14orf166|51637|chromosome 14 open reading frame 166	CR606480|C14orf166|51637|chromosome 14 open reading frame 166	CR599997|C14orf166|51637|chromosome 14 open reading frame 166	BC001722|C14orf166|51637|chromosome 14 open reading frame 166	CR606481|C14orf166|51637|chromosome 14 open reading frame 166	CR611728|C14orf166|51637|chromosome 14 open reading frame 166
hg18_v1_chr14_-_19572756_19572756	0.0130355	SOX2.p2	NM_001004714|OR4K13|390433|olfactory receptor, family 4, subfamily K, member 13
hg18_v1_chr14_+_69148066_69148222	0.0129839	SOX2.p2	D87434|KIAA0247|9766|KIAA0247
hg18_v1_chr10_+_104253716_104253903	0.0129611	SOX2.p2	AK312319|SUFU|51684|suppressor of fused homolog (Drosophila)	BC013291|SUFU|51684|suppressor of fused homolog (Drosophila)	AF175770|SUFU|51684|suppressor of fused homolog (Drosophila)	AF144231|SUFU|51684|suppressor of fused homolog (Drosophila)	AF159447|SUFU|51684|suppressor of fused homolog (Drosophila)	AY358550|SUFU|51684|suppressor of fused homolog (Drosophila)	AF222345|SUFU|51684|suppressor of fused homolog (Drosophila)	DQ892586|SUFU|51684|suppressor of fused homolog (Drosophila)	DQ895804|SUFU|51684|suppressor of fused homolog (Drosophila)	AF172319|SUFU|51684|suppressor of fused homolog (Drosophila)
hg18_v1_chr7_+_26404711_26404863	0.0129481	SOX2.p2	AK056484|LOC441204|441204|hypothetical locus LOC441204
hg18_v1_chr19_+_977555_977580	0.012919	SOX2.p2	CR616871|CNN2|1265|calponin 2
hg18_v1_chr19_-_14490235_14490346	0.0128958	SOX2.p2	CR601481|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1
hg18_v1_chr11_-_6870306_6870405	0.0128779	SOX2.p2	NM_003700|OR2D2|120776|olfactory receptor, family 2, subfamily D, member 2	BC140729|OR2D2|120776|olfactory receptor, family 2, subfamily D, member 2
hg18_v1_chr17_-_34234931_34234981	0.0128	SOX2.p2	BC003085|CWC25|54883|CWC25 spliceosome-associated protein homolog (S. cerevisiae)
hg18_v1_chr12_-_108399476_108399505	0.0127736	SOX2.p2	AF113208|KCTD10|83892|potassium channel tetramerisation domain containing 10	BC040062|KCTD10|83892|potassium channel tetramerisation domain containing 10	AK056912|KCTD10|83892|potassium channel tetramerisation domain containing 10	AK222548|KCTD10|83892|potassium channel tetramerisation domain containing 10
hg18_v1_chr15_+_67393795_67393795	0.0127677	SOX2.p2	AK000197|PAQR5|54852|progestin and adipoQ receptor family member V	AY424283|PAQR5|54852|progestin and adipoQ receptor family member V	NM_001104554|PAQR5|54852|progestin and adipoQ receptor family member V
hg18_v1_chr8_+_64243662_64243735	0.0127658	SOX2.p2	NM_152758|YTHDF3|253943|YTH domain family, member 3	BC052970|YTHDF3|253943|YTH domain family, member 3	AK127574|YTHDF3|253943|YTH domain family, member 3	AL832005|YTHDF3|253943|YTH domain family, member 3	BX537996|YTHDF3|253943|YTH domain family, member 3
hg18_v1_chr2_+_69995807_69995966	0.012764	SOX2.p2	L06895|MXD1|4084|MAX dimerization protein 1	BC113531|MXD1|4084|MAX dimerization protein 1	BC117260|MXD1|4084|MAX dimerization protein 1	BC143831|MXD1|4084|MAX dimerization protein 1	BC143832|MXD1|4084|MAX dimerization protein 1	BC144601|MXD1|4084|MAX dimerization protein 1	BC069377|MXD1|4084|MAX dimerization protein 1	BC069433|MXD1|4084|MAX dimerization protein 1	CR536495|MXD1|4084|MAX dimerization protein 1	CR541692|MXD1|4084|MAX dimerization protein 1
hg18_v1_chr4_+_164484540_164484540	0.012758	SOX2.p2	BC042416|NPY5R|4889|neuropeptide Y receptor Y5	NM_006174|NPY5R|4889|neuropeptide Y receptor Y5
hg18_v1_chr17_+_77261457_77261475	0.0127458	SOX2.p2	
hg18_v1_chr11_-_47620590_47620788	0.0127222	SOX2.p2	DQ891810|MTCH2|23788|mitochondrial carrier homolog 2 (C. elegans)	DQ894993|MTCH2|23788|mitochondrial carrier homolog 2 (C. elegans)	AK223097|MTCH2|23788|mitochondrial carrier homolog 2 (C. elegans)	CR625977|MTCH2|23788|mitochondrial carrier homolog 2 (C. elegans)	BC000875|MTCH2|23788|mitochondrial carrier homolog 2 (C. elegans)	AY380792|MTCH2|23788|mitochondrial carrier homolog 2 (C. elegans)	AF085361|MTCH2|23788|mitochondrial carrier homolog 2 (C. elegans)	AF176008|MTCH2|23788|mitochondrial carrier homolog 2 (C. elegans)	AK295218|MTCH2|23788|mitochondrial carrier homolog 2 (C. elegans)	CR619866|MTCH2|23788|mitochondrial carrier homolog 2 (C. elegans)	CR606794|MTCH2|23788|mitochondrial carrier homolog 2 (C. elegans)	AK313032|MTCH2|23788|mitochondrial carrier homolog 2 (C. elegans)	CR618818|MTCH2|23788|mitochondrial carrier homolog 2 (C. elegans)	NM_014342|MTCH2|23788|mitochondrial carrier homolog 2 (C. elegans)
hg18_v1_chr1_-_154988647_154988863	0.0127129	SOX2.p2	NM_001126051|HDGF|3068|hepatoma-derived growth factor	AK096411|HDGF|3068|hepatoma-derived growth factor	AK304468|HDGF|3068|hepatoma-derived growth factor	NM_001126050|HDGF|3068|hepatoma-derived growth factor
hg18_v1_chr11_+_71221893_71221893	0.0126912	SOX2.p2	AF529416|DEFB108B|245911|defensin, beta 108B	NM_001002035|DEFB108B|245911|defensin, beta 108B
hg18_v1_chr4_-_170428681_170428684	0.012668	SOX2.p2	AK021429|SH3RF1|57630|SH3 domain containing ring finger 1
hg18_v1_chr4_+_175441402_175441469	0.0126674	SOX2.p2	NM_001040157|KIAA1712|80817|KIAA1712
hg18_v1_chrX_-_73751185_73751194	0.0126621	SOX2.p2	NM_016120|RLIM|51132|ring finger protein, LIM domain interacting	NM_183353|RLIM|51132|ring finger protein, LIM domain interacting
hg18_v1_chr8_+_86344984_86345007	0.0126546	SOX2.p2	BC052602|CA13|377677|carbonic anhydrase XIII
hg18_v1_chr17_+_55052185_55052270	0.0126362	SOX2.p2	
hg18_v1_chr3_-_113842553_113842594	0.0126244	SOX2.p2	BX647117|CCDC80|151887|coiled-coil domain containing 80	BC116178|CCDC80|151887|coiled-coil domain containing 80	BC116179|CCDC80|151887|coiled-coil domain containing 80	AY333429|CCDC80|151887|coiled-coil domain containing 80	AF506819|CCDC80|151887|coiled-coil domain containing 80
hg18_v1_chr2_+_113542017_113542029	0.0126061	SOX2.p2	AY029413|IL1F10|84639|interleukin 1 family, member 10 (theta)	NM_173161|IL1F10|84639|interleukin 1 family, member 10 (theta)	BC103966|IL1F10|84639|interleukin 1 family, member 10 (theta)	BC103967|IL1F10|84639|interleukin 1 family, member 10 (theta)	BC103968|IL1F10|84639|interleukin 1 family, member 10 (theta)	AY358846|IL1F10|84639|interleukin 1 family, member 10 (theta)
hg18_v1_chr19_+_11569234_11569349	0.0126027	SOX2.p2	NM_145295|ZNF627|199692|zinc finger protein 627	BC098416|ZNF627|199692|zinc finger protein 627	AK095639|ZNF627|199692|zinc finger protein 627	BC006279|ZNF627|199692|zinc finger protein 627	AK074846|ZNF627|199692|zinc finger protein 627	BC069232|ZNF627|199692|zinc finger protein 627
hg18_v1_chr9_-_138412709_138412709	0.0125163	SOX2.p2	NM_003086|SNAPC4|6621|small nuclear RNA activating complex, polypeptide 4, 190kDa
hg18_v1_chr17_-_3518628_3518643	0.0124913	SOX2.p2	CR595900|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	CR615413|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3
hg18_v1_chr9_+_39345665_39345706	0.0124757	SOX2.p2	AK302569|FAM75A2|642265|family with sequence similarity 75, member A2	NM_001040065|FAM75A2|642265|family with sequence similarity 75, member A2	NM_001085452|FAM75A1|647060|family with sequence similarity 75, member A1	BC146855|FAM75A2|642265|family with sequence similarity 75, member A2
hg18_v1_chr4_+_72078255_72078416	0.0124232	SOX2.p2	M60527|DCK|1633|deoxycytidine kinase	BC114617|DCK|1633|deoxycytidine kinase	BT019941|DCK|1633|deoxycytidine kinase	BT019942|DCK|1633|deoxycytidine kinase	CR536527|DCK|1633|deoxycytidine kinase	CR541876|DCK|1633|deoxycytidine kinase
hg18_v1_chr1_+_22650930_22650933	0.0124187	SOX2.p2	AK091019|ZBTB40|9923|zinc finger and BTB domain containing 40	AK095273|ZBTB40|9923|zinc finger and BTB domain containing 40	NM_001083621|ZBTB40|9923|zinc finger and BTB domain containing 40	NM_014870|ZBTB40|9923|zinc finger and BTB domain containing 40
hg18_v1_chr5_+_65258316_65258356	0.0123909	SOX2.p2	BC126464|ERBB2IP|55914|erbb2 interacting protein	BC144075|ERBB2IP|55914|erbb2 interacting protein
hg18_v1_chr7_+_127015650_127015827	0.0123803	SOX2.p2	CR592093|ARF5|381|ADP-ribosylation factor 5	CR624513|ARF5|381|ADP-ribosylation factor 5	AK307297|ARF5|381|ADP-ribosylation factor 5	CR598890|ARF5|381|ADP-ribosylation factor 5	CR619680|ARF5|381|ADP-ribosylation factor 5	AK308548|ARF5|381|ADP-ribosylation factor 5	BC033104|ARF5|381|ADP-ribosylation factor 5	CR610040|ARF5|381|ADP-ribosylation factor 5	CR619021|ARF5|381|ADP-ribosylation factor 5	CR625498|ARF5|381|ADP-ribosylation factor 5	CR624558|ARF5|381|ADP-ribosylation factor 5	CR618126|ARF5|381|ADP-ribosylation factor 5	M57567|ARF5|381|ADP-ribosylation factor 5	AK297026|ARF5|381|ADP-ribosylation factor 5	AK312107|ARF5|381|ADP-ribosylation factor 5	CR619769|ARF5|381|ADP-ribosylation factor 5	BC003043|ARF5|381|ADP-ribosylation factor 5	NM_001662|ARF5|381|ADP-ribosylation factor 5	AF493884|ARF5|381|ADP-ribosylation factor 5	BT007087|ARF5|381|ADP-ribosylation factor 5	CR614865|ARF5|381|ADP-ribosylation factor 5
hg18_v1_chr3_-_32587188_32587369	0.0123728	SOX2.p2	BX649189|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1	CR619992|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1	CR595277|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1	CR623843|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1	AK222573|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1	AK222653|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1	BC131620|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1	AF078849|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1	AK074348|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1	AK293253|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1	NM_016141|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1
hg18_v1_chr12_+_53809731_53809819	0.0123653	SOX2.p2	BC136988|OR9K2|441639|olfactory receptor, family 9, subfamily K, member 2	NM_001005243|OR9K2|441639|olfactory receptor, family 9, subfamily K, member 2
hg18_v1_chr1_+_224317036_224317043	0.0123516	SOX2.p2	D28384|H3F3A|3020|H3 histone, family 3A	NM_002107|H3F3A|3020|H3 histone, family 3A
hg18_v1_chr12_-_54996098_54996394	0.0123407	SOX2.p2	AY032624|CNPY2|10330|canopy 2 homolog (zebrafish)	AY359102|CNPY2|10330|canopy 2 homolog (zebrafish)	NM_001190991|CNPY2|10330|canopy 2 homolog (zebrafish)	NM_014255|CNPY2|10330|canopy 2 homolog (zebrafish)
hg18_v1_chr9_+_131637549_131637623	0.0123249	SOX2.p2	BC039593|USP20|10868|ubiquitin specific peptidase 20	AY074877|USP20|10868|ubiquitin specific peptidase 20	NM_001008563|USP20|10868|ubiquitin specific peptidase 20
hg18_v1_chr19_+_13090101_13090150	0.0123201	SOX2.p2	NM_052876|NACC1|112939|nucleus accumbens associated 1, BEN and BTB (POZ) domain containing	BC055396|NACC1|112939|nucleus accumbens associated 1, BEN and BTB (POZ) domain containing	AF395817|NACC1|112939|nucleus accumbens associated 1, BEN and BTB (POZ) domain containing
hg18_v1_chr20_-_2589476_2589596	0.0122876	SOX2.p2	AL050094|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta
hg18_v1_chr19_-_55008172_55008419	0.0122844	SOX2.p2	CR592794|FUZ|80199|fuzzy homolog (Drosophila)	BC010092|FUZ|80199|fuzzy homolog (Drosophila)	CR609003|FUZ|80199|fuzzy homolog (Drosophila)	AK057964|FUZ|80199|fuzzy homolog (Drosophila)	BC004445|FUZ|80199|fuzzy homolog (Drosophila)	BC016793|FUZ|80199|fuzzy homolog (Drosophila)	CR613541|FUZ|80199|fuzzy homolog (Drosophila)	CR616619|FUZ|80199|fuzzy homolog (Drosophila)	CR621655|FUZ|80199|fuzzy homolog (Drosophila)	CR595499|FUZ|80199|fuzzy homolog (Drosophila)	CR607071|FUZ|80199|fuzzy homolog (Drosophila)	AK026341|FUZ|80199|fuzzy homolog (Drosophila)	AK315445|FUZ|80199|fuzzy homolog (Drosophila)	AK295072|FUZ|80199|fuzzy homolog (Drosophila)	NM_001171937|FUZ|80199|fuzzy homolog (Drosophila)	NM_025129|FUZ|80199|fuzzy homolog (Drosophila)
hg18_v1_chr20_+_32755778_32755951	0.0122811	SOX2.p2	AY422170|TP53INP2|58476|tumor protein p53 inducible nuclear protein 2	NM_021202|TP53INP2|58476|tumor protein p53 inducible nuclear protein 2	AJ297792|TP53INP2|58476|tumor protein p53 inducible nuclear protein 2	AK292443|TP53INP2|58476|tumor protein p53 inducible nuclear protein 2	BC035639|TP53INP2|58476|tumor protein p53 inducible nuclear protein 2
hg18_v1_chrX_-_153952447_153952836	0.0122808	SOX2.p2	CR613140|MTCP1NB|100272147|mature T-cell proliferation 1 neighbor	BC002600|MTCP1NB|100272147|mature T-cell proliferation 1 neighbor	X64644|MTCP1NB|100272147|mature T-cell proliferation 1 neighbor	NM_001018024|MTCP1NB|100272147|mature T-cell proliferation 1 neighbor	NM_001018025|MTCP1|4515|mature T-cell proliferation 1	CR604905|MTCP1NB|100272147|mature T-cell proliferation 1 neighbor
hg18_v1_chr17_+_62261696_62261699	0.0122797	SOX2.p2	AK290171|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5
hg18_v1_chr17_+_63338500_63338579	0.0122792	SOX2.p2	AK025776|BPTF|2186|bromodomain PHD finger transcription factor
hg18_v1_chr3_-_126325132_126325158	0.0122727	SOX2.p2	BC063528|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8	CR596399|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8
hg18_v1_chr16_+_52081836_52081927	0.0122721	SOX2.p2	CR608692|RBL2|5934|retinoblastoma-like 2 (p130)
hg18_v1_chr11_-_62230078_62230466	0.0122639	SOX2.p2	CR621335|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	CR617488|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	BC041640|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	BC012140|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	BC004911|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	AK075317|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	AK225029|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	AK027524|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	NM_032667|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	CR602177|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	CR609599|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)
hg18_v1_chr1_+_1104939_1104972	0.0122372	SOX2.p2	AK093438|TTLL10|254173|tubulin tyrosine ligase-like family, member 10	NM_153254|TTLL10|254173|tubulin tyrosine ligase-like family, member 10	BC126152|TTLL10|254173|tubulin tyrosine ligase-like family, member 10	BC126154|TTLL10|254173|tubulin tyrosine ligase-like family, member 10
hg18_v1_chr3_+_99370233_99370233	0.012215	SOX2.p2	NM_001005515|OR5H15|403274|olfactory receptor, family 5, subfamily H, member 15
hg18_v1_chr11_+_94439964_94440020	0.0121529	SOX2.p2	BC057783|SRSF8|10929|serine/arginine-rich splicing factor 8
hg18_v1_chr6_-_30748760_30748808	0.0121394	SOX2.p2	AK302721|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16	NM_001164239|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16	NM_003587|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16
hg18_v1_chr7_+_56086960_56087060	0.0120963	SOX2.p2	AK316230|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	CR590985|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	AF385084|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	AK297751|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	CR605318|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	CR612852|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	AK298371|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	AK313819|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	CR600067|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	CR626783|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	CR613031|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	CR626775|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	AB209728|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	CR609340|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	AM295155|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)
hg18_v1_chr2_+_234490781_234490788	0.0120603	SOX2.p2	AY090109|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8	NM_024080|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8	BC126342|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8	BC143819|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8
hg18_v1_chr22_+_28609201_28609321	0.01205	SOX2.p2	BC142713|MTMR3|8897|myotubularin related protein 3	AB002369|MTMR3|8897|myotubularin related protein 3	BC152455|MTMR3|8897|myotubularin related protein 3
hg18_v1_chrX_+_122821217_122822029	0.0119972	SOX2.p2	AK313883|XIAP|331|X-linked inhibitor of apoptosis	AK309704|XIAP|331|X-linked inhibitor of apoptosis	NM_001167|XIAP|331|X-linked inhibitor of apoptosis	U32974|XIAP|331|X-linked inhibitor of apoptosis	BC032729|XIAP|331|X-linked inhibitor of apoptosis
hg18_v1_chr6_-_111242883_111242939	0.011983	SOX2.p2	BC047513|CDK19|23097|cyclin-dependent kinase 19
hg18_v1_chr6_+_30796121_30796122	0.0119627	SOX2.p2	CR594701|TUBB|203068|tubulin, beta	CR594975|TUBB|203068|tubulin, beta	CR597459|TUBB|203068|tubulin, beta	CR599205|TUBB|203068|tubulin, beta	CR615134|TUBB|203068|tubulin, beta	CR618102|TUBB|203068|tubulin, beta	CR619725|TUBB|203068|tubulin, beta	CR624578|TUBB|203068|tubulin, beta	CR624775|TUBB|203068|tubulin, beta	CR626650|TUBB|203068|tubulin, beta	CR626716|TUBB|203068|tubulin, beta	CR626734|TUBB|203068|tubulin, beta	CR598038|TUBB|203068|tubulin, beta	CR603542|TUBB|203068|tubulin, beta	CR609663|TUBB|203068|tubulin, beta	CR610813|TUBB|203068|tubulin, beta	CR621201|TUBB|203068|tubulin, beta	CR621356|TUBB|203068|tubulin, beta	CR626264|TUBB|203068|tubulin, beta
hg18_v1_chr1_+_112740322_112740376	0.0119485	SOX2.p2	NM_018704|CTTNBP2NL|55917|CTTNBP2 N-terminal like	AK023340|CTTNBP2NL|55917|CTTNBP2 N-terminal like
hg18_v1_chr5_-_36912487_36912554	0.0119328	SOX2.p2	AK000901|LOC646719|646719|hypothetical LOC646719
hg18_v1_chr16_+_65620715_65620864	0.0119148	SOX2.p2	AK290462|CBFB|865|core-binding factor, beta subunit	AK291834|CBFB|865|core-binding factor, beta subunit	AF294326|CBFB|865|core-binding factor, beta subunit	BT006862|CBFB|865|core-binding factor, beta subunit	DQ890558|CBFB|865|core-binding factor, beta subunit	DQ893719|CBFB|865|core-binding factor, beta subunit	L20298|CBFB|865|core-binding factor, beta subunit	AK311724|CBFB|865|core-binding factor, beta subunit
hg18_v1_chr5_+_109052984_109053008	0.0118518	SOX2.p2	
hg18_v1_chr6_-_79844658_79844894	0.0118494	SOX2.p2	AK057039|PHIP|55023|pleckstrin homology domain interacting protein	NM_017934|PHIP|55023|pleckstrin homology domain interacting protein
hg18_v1_chr3_+_57718067_57718418	0.0118125	SOX2.p2	AY358410|SLMAP|7871|sarcolemma associated protein	NM_007159|SLMAP|7871|sarcolemma associated protein	AK124200|SLMAP|7871|sarcolemma associated protein	BC114627|SLMAP|7871|sarcolemma associated protein	BC115701|SLMAP|7871|sarcolemma associated protein
hg18_v1_chr1_+_28717349_28717390	0.0117694	SOX2.p2	BC069198|RCC1|1104|regulator of chromosome condensation 1
hg18_v1_chr18_+_75354312_75354424	0.0116804	SOX2.p2	BC045628|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1
hg18_v1_chr1_-_1613802_1613848	0.0116569	SOX2.p2	CR936618|SLC35E2B|728661|solute carrier family 35, member E2B	BC062371|SLC35E2|9906|solute carrier family 35, member E2
hg18_v1_chr6_-_166960690_166960726	0.0116106	SOX2.p2	BC002363|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2	NM_021135|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2
hg18_v1_chr19_-_21742162_21742269	0.0116035	SOX2.p2	BC035579|ZNF100|163227|zinc finger protein 100	AK308798|ZNF100|163227|zinc finger protein 100	AK126551|ZNF100|163227|zinc finger protein 100	NM_173531|ZNF100|163227|zinc finger protein 100
hg18_v1_chrX_+_22200950_22201008	0.0115598	SOX2.p2	GQ355336|ZNF645|158506|zinc finger protein 645	AK098601|ZNF645|158506|zinc finger protein 645	NM_152577|ZNF645|158506|zinc finger protein 645	BC074910|ZNF645|158506|zinc finger protein 645	BC126190|ZNF645|158506|zinc finger protein 645	BC126192|ZNF645|158506|zinc finger protein 645
hg18_v1_chr17_+_77261401_77261427	0.0115564	SOX2.p2	AK294190|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate	BC003565|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate	NM_004712|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate	U43895|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate
hg18_v1_chr1_-_174442906_174442977	0.0115527	SOX2.p2	BC020845|RFWD2|64326|ring finger and WD repeat domain 2	AK314750|RFWD2|64326|ring finger and WD repeat domain 2
hg18_v1_chr22_-_18484744_18484792	0.0114622	SOX2.p2	CR592601|TRMT2A|27037|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	AK304068|TRMT2A|27037|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	CR608558|TRMT2A|27037|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	AK057029|TRMT2A|27037|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	NM_022727|TRMT2A|27037|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	NM_182984|TRMT2A|27037|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)
hg18_v1_chr9_-_131637382_131637419	0.01146	SOX2.p2	NM_016520|C9orf78|51759|chromosome 9 open reading frame 78
hg18_v1_chr1_-_159369041_159369061	0.0114388	SOX2.p2	CR619646|DEDD|9191|death effector domain containing
hg18_v1_chr5_+_36642213_36642213	0.011426	SOX2.p2	NM_001166696|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	NM_004172|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3
hg18_v1_chr10_+_103815114_103815152	0.0113332	SOX2.p2	BC014993|HPS6|79803|Hermansky-Pudlak syndrome 6	NM_024747|HPS6|79803|Hermansky-Pudlak syndrome 6	AF536238|HPS6|79803|Hermansky-Pudlak syndrome 6	BC011594|HPS6|79803|Hermansky-Pudlak syndrome 6
hg18_v1_chr1_+_10995265_10995330	0.0113156	SOX2.p2	NM_007375|TARDBP|23435|TAR DNA binding protein	AK299454|TARDBP|23435|TAR DNA binding protein	AK312416|TARDBP|23435|TAR DNA binding protein	BC001487|TARDBP|23435|TAR DNA binding protein	BC095435|TARDBP|23435|TAR DNA binding protein	BC071657|TARDBP|23435|TAR DNA binding protein	AL050265|TARDBP|23435|TAR DNA binding protein	AK222754|TARDBP|23435|TAR DNA binding protein	AK295920|TARDBP|23435|TAR DNA binding protein
hg18_v1_chr16_+_66398477_66398563	0.0113092	SOX2.p2	AF132730|TSNAXIP1|55815|translin-associated factor X interacting protein 1	AK303841|TSNAXIP1|55815|translin-associated factor X interacting protein 1	BC050693|TSNAXIP1|55815|translin-associated factor X interacting protein 1	AK302300|TSNAXIP1|55815|translin-associated factor X interacting protein 1	AK301920|TSNAXIP1|55815|translin-associated factor X interacting protein 1	NM_018430|TSNAXIP1|55815|translin-associated factor X interacting protein 1	BC111018|TSNAXIP1|55815|translin-associated factor X interacting protein 1	BC035320|TSNAXIP1|55815|translin-associated factor X interacting protein 1	AK027245|TSNAXIP1|55815|translin-associated factor X interacting protein 1
hg18_v1_chr7_+_100047660_100047751	0.011298	SOX2.p2	CR609640|MOSPD3|64598|motile sperm domain containing 3	NM_001040097|MOSPD3|64598|motile sperm domain containing 3
hg18_v1_chr2_-_26058831_26058871	0.0112908	SOX2.p2	BC092406|KIF3C|3797|kinesin family member 3C	AK293738|KIF3C|3797|kinesin family member 3C	AK315324|KIF3C|3797|kinesin family member 3C	BC042486|KIF3C|3797|kinesin family member 3C	BX571741|KIF3C|3797|kinesin family member 3C
hg18_v1_chr14_-_76564374_76564501	0.0112573	SOX2.p2	AB058768|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like
hg18_v1_chr11_-_55438633_55438633	0.0111846	SOX2.p2	NM_001001960|OR5W2|390148|olfactory receptor, family 5, subfamily W, member 2
hg18_v1_chr1_+_224064427_224064474	0.0111589	SOX2.p2	CR593306|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)	BC095430|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)	CR612904|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)	CR625608|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)	BC003567|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)	BC008291|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)
hg18_v1_chr15_-_35177664_35177794	0.0111481	SOX2.p2	EU831754|MEIS2|4212|Meis homeobox 2	EU831831|MEIS2|4212|Meis homeobox 2	AK294411|MEIS2|4212|Meis homeobox 2	AK311546|MEIS2|4212|Meis homeobox 2	AK056038|MEIS2|4212|Meis homeobox 2	NM_172315|MEIS2|4212|Meis homeobox 2
hg18_v1_chr16_+_70053681_70053698	0.0111464	SOX2.p2	
hg18_v1_chr6_-_2787068_2787095	0.0111408	SOX2.p2	CR626605|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1	BC009015|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1	CR610741|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1	NM_030666|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1	M93056|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1	AK298044|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1	AK312973|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1	AK223370|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1	AK291327|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1
hg18_v1_chr4_+_186176988_186177076	0.0111403	SOX2.p2	BC140795|HELT|391723|HES/HEY-like transcription factor	BC144567|HELT|391723|HES/HEY-like transcription factor	BC144569|HELT|391723|HES/HEY-like transcription factor	NM_001029887|HELT|391723|HES/HEY-like transcription factor
hg18_v1_chr4_+_142361494_142361516	0.0111394	SOX2.p2	NM_014487|ZNF330|27309|zinc finger protein 330	AK315463|ZNF330|27309|zinc finger protein 330	BC004421|ZNF330|27309|zinc finger protein 330
hg18_v1_chr1_+_160734259_160734414	0.0111263	SOX2.p2	AJ536197|UHMK1|127933|U2AF homology motif (UHM) kinase 1	AK292369|UHMK1|127933|U2AF homology motif (UHM) kinase 1	AB384827|UHMK1|127933|U2AF homology motif (UHM) kinase 1
hg18_v1_chr11_+_69165018_69165056	0.0111246	SOX2.p2	NM_053056|CCND1|595|cyclin D1
hg18_v1_chr4_-_82611995_82612020	0.0111156	SOX2.p2	BX648337|RASGEF1B|153020|RasGEF domain family, member 1B	BC121003|RASGEF1B|153020|RasGEF domain family, member 1B	BC121004|RASGEF1B|153020|RasGEF domain family, member 1B
hg18_v1_chr1_-_184696839_184696861	0.0111017	SOX2.p2	M33478|PDC|5132|phosducin	NM_002597|PDC|5132|phosducin
hg18_v1_chr20_+_43470354_43470578	0.0110767	SOX2.p2	AY113697|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2	AM393126|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2	AM393396|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2	AM393681|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2	CR595212|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2
hg18_v1_chr7_-_122627235_122627260	0.0110543	SOX2.p2	AK026413|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1	AK314537|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1	AF260824|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1	BC111775|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1	NM_022444|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1
hg18_v1_chr5_-_43638860_43639042	0.0110159	SOX2.p2	
hg18_v1_chr1_-_181826292_181826381	0.0110085	SOX2.p2	BC001606|NCF2|4688|neutrophil cytosolic factor 2	NM_000433|NCF2|4688|neutrophil cytosolic factor 2	NM_001190789|NCF2|4688|neutrophil cytosolic factor 2	NM_001190794|NCF2|4688|neutrophil cytosolic factor 2
hg18_v1_chr7_-_92301147_92301166	0.011004	SOX2.p2	BC052264|CDK6|1021|cyclin-dependent kinase 6	NM_001259|CDK6|1021|cyclin-dependent kinase 6
hg18_v1_chr22_+_39817733_39817740	0.0109909	SOX2.p2	U01877|EP300|2033|E1A binding protein p300
hg18_v1_chr3_+_176059763_176059805	0.0109625	SOX2.p2	AJ607396|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2	AK308416|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2	AL832144|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2	NM_207015|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2	BC057243|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2
hg18_v1_chr19_+_46462125_46462168	0.0109209	SOX2.p2	CR594584|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	BC009988|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1
hg18_v1_chr19_+_977627_977697	0.0109111	SOX2.p2	AK024835|CNN2|1265|calponin 2	AK057960|CNN2|1265|calponin 2	AK293171|CNN2|1265|calponin 2	BC141818|CNN2|1265|calponin 2	BC141833|CNN2|1265|calponin 2	CR598250|CNN2|1265|calponin 2	D83735|CNN2|1265|calponin 2	AK222924|CNN2|1265|calponin 2	CR611249|CNN2|1265|calponin 2	CR615042|CNN2|1265|calponin 2	CR618608|CNN2|1265|calponin 2	AK300788|CNN2|1265|calponin 2	CR592852|CNN2|1265|calponin 2	D86059|CNN2|1265|calponin 2	BC148264|CNN2|1265|calponin 2	CR541810|CNN2|1265|calponin 2	CR541831|CNN2|1265|calponin 2	CR606476|CNN2|1265|calponin 2	AY927514|CNN2|1265|calponin 2
hg18_v1_chr4_+_123967265_123967323	0.0109031	SOX2.p2	J04513|FGF2|2247|fibroblast growth factor 2 (basic)	NM_002006|FGF2|2247|fibroblast growth factor 2 (basic)	BC111737|FGF2|2247|fibroblast growth factor 2 (basic)
hg18_v1_chr1_+_224317056_224317059	0.0108992	SOX2.p2	BC081560|LOC440926|440926|H3 histone, family 3A pseudogene	BC081561|H3F3A|3020|H3 histone, family 3A	CR594691|LOC440926|440926|H3 histone, family 3A pseudogene	CR600004|H3F3A|3020|H3 histone, family 3A	CR625697|LOC440926|440926|H3 histone, family 3A pseudogene
hg18_v1_chr20_+_30259360_30259424	0.0108788	SOX2.p2	CR617950|POFUT1|23509|protein O-fucosyltransferase 1	AL832023|POFUT1|23509|protein O-fucosyltransferase 1
hg18_v1_chr19_-_51856129_51856292	0.010861	SOX2.p2	BC034052|DACT3|147906|dapper, antagonist of beta-catenin, homolog 3 (Xenopus laevis)	NM_145056|DACT3|147906|dapper, antagonist of beta-catenin, homolog 3 (Xenopus laevis)
hg18_v1_chr1_-_85514580_85514867	0.0108048	SOX2.p2	AF105066|BCL10|8915|B-cell CLL/lymphoma 10	AF127386|BCL10|8915|B-cell CLL/lymphoma 10	EF189176|BCL10|8915|B-cell CLL/lymphoma 10	BC053617|BCL10|8915|B-cell CLL/lymphoma 10	BX647306|BCL10|8915|B-cell CLL/lymphoma 10	AK291346|BCL10|8915|B-cell CLL/lymphoma 10	AF100338|BCL10|8915|B-cell CLL/lymphoma 10	AF057700|BCL10|8915|B-cell CLL/lymphoma 10	AF134395|BCL10|8915|B-cell CLL/lymphoma 10
hg18_v1_chrX_-_100801472_100801518	0.0107813	SOX2.p2	BC052628|ARMCX2|9823|armadillo repeat containing, X-linked 2	AB011084|ARMCX2|9823|armadillo repeat containing, X-linked 2	BC012541|ARMCX2|9823|armadillo repeat containing, X-linked 2	BX648494|ARMCX2|9823|armadillo repeat containing, X-linked 2	AK291342|ARMCX2|9823|armadillo repeat containing, X-linked 2	NM_014782|ARMCX2|9823|armadillo repeat containing, X-linked 2	NM_177949|ARMCX2|9823|armadillo repeat containing, X-linked 2
hg18_v1_chr1_-_151873191_151873191	0.0107737	SOX2.p2	NM_001024210|S100A13|6284|S100 calcium binding protein A13
hg18_v1_chr19_-_12853249_12853334	0.0107731	SOX2.p2	AK075449|DNASE2|1777|deoxyribonuclease II, lysosomal	AF047016|DNASE2|1777|deoxyribonuclease II, lysosomal	AB004574|DNASE2|1777|deoxyribonuclease II, lysosomal	CR605842|DNASE2|1777|deoxyribonuclease II, lysosomal	CR608424|DNASE2|1777|deoxyribonuclease II, lysosomal	AK297493|DNASE2|1777|deoxyribonuclease II, lysosomal	AF045937|DNASE2|1777|deoxyribonuclease II, lysosomal	CR617284|DNASE2|1777|deoxyribonuclease II, lysosomal	AK315358|DNASE2|1777|deoxyribonuclease II, lysosomal	BC065209|DNASE2|1777|deoxyribonuclease II, lysosomal	AF060222|DNASE2|1777|deoxyribonuclease II, lysosomal	AK311145|DNASE2|1777|deoxyribonuclease II, lysosomal	NM_001375|DNASE2|1777|deoxyribonuclease II, lysosomal
hg18_v1_chr5_-_39430180_39430277	0.010747	SOX2.p2	DQ891872|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)	EU176643|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)	AF188298|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)	U39050|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)
hg18_v1_chr4_-_174687931_174687958	0.0107459	SOX2.p2	NM_021973|HAND2|9464|heart and neural crest derivatives expressed 2	AK122739|HAND2|9464|heart and neural crest derivatives expressed 2	FJ226608|HAND2|9464|heart and neural crest derivatives expressed 2
hg18_v1_chr5_+_149526533_149526630	0.0107422	SOX2.p2	NM_001804|CDX1|1044|caudal type homeobox 1	AF239666|CDX1|1044|caudal type homeobox 1	U51095|CDX1|1044|caudal type homeobox 1	BC096249|CDX1|1044|caudal type homeobox 1	BC096250|CDX1|1044|caudal type homeobox 1	BC096251|CDX1|1044|caudal type homeobox 1	BC096252|CDX1|1044|caudal type homeobox 1	BC127122|CDX1|1044|caudal type homeobox 1
hg18_v1_chr2_-_234441766_234441786	0.0107216	SOX2.p2	AK301707|MSL3L2|151507|male-specific lethal 3-like 2 (Drosophila)
hg18_v1_chr3_+_198961160_198961246	0.0106655	SOX2.p2	AL136558|FYTTD1|84248|forty-two-three domain containing 1	AK315019|FYTTD1|84248|forty-two-three domain containing 1	AJ344094|FYTTD1|84248|forty-two-three domain containing 1	AK296283|FYTTD1|84248|forty-two-three domain containing 1	AM393053|FYTTD1|84248|forty-two-three domain containing 1	CR533502|FYTTD1|84248|forty-two-three domain containing 1
hg18_v1_chr1_-_203985701_203985724	0.0105245	SOX2.p2	CR457339|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1	DQ891218|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1	DQ894401|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1
hg18_v1_chr17_+_40141714_40141813	0.0105232	SOX2.p2	AK295296|DBF4B|80174|DBF4 homolog B (S. cerevisiae)	BC026999|DBF4B|80174|DBF4 homolog B (S. cerevisiae)
hg18_v1_chr12_-_119391884_119391894	0.0104993	SOX2.p2	CR606248|SRSF9|8683|serine/arginine-rich splicing factor 9
hg18_v1_chr6_+_26264531_26264536	0.0104491	SOX2.p2	AK313681|HIST1H1E|3008|histone cluster 1, H1e
hg18_v1_chr12_+_103904243_103904259	0.0104344	SOX2.p2	BC032326|C12orf45|121053|chromosome 12 open reading frame 45	DQ891649|C12orf45|121053|chromosome 12 open reading frame 45	DQ894838|C12orf45|121053|chromosome 12 open reading frame 45
hg18_v1_chr17_-_17125314_17125346	0.0104127	SOX2.p2	BC001891|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	NM_003653|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	CR600698|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	CR616766|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)
hg18_v1_chr7_+_99613282_99613318	0.0104101	SOX2.p2	AJ007798|STAG3|10734|stromal antigen 3
hg18_v1_chr5_-_176671897_176671915	0.0104006	SOX2.p2	NM_001142935|MXD3|83463|MAX dimerization protein 3	NM_031300|MXD3|83463|MAX dimerization protein 3	CR595562|MXD3|83463|MAX dimerization protein 3
hg18_v1_chr7_-_72894774_72894822	0.0103789	SOX2.p2	AK301597|WBSCR27|155368|Williams Beuren syndrome chromosome region 27	AF534110|WBSCR27|155368|Williams Beuren syndrome chromosome region 27	NM_152559|WBSCR27|155368|Williams Beuren syndrome chromosome region 27	AY354928|WBSCR27|155368|Williams Beuren syndrome chromosome region 27
hg18_v1_chr4_-_83513909_83513962	0.0103774	SOX2.p2	BC002401|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)
hg18_v1_chr1_-_175400665_175400731	0.0103594	SOX2.p2	AK309094|ASTN1|460|astrotactin 1
hg18_v1_chr17_-_33043514_33043613	0.010353	SOX2.p2	BC117313|SYNRG|11276|synergin, gamma	BC143452|SYNRG|11276|synergin, gamma	BC143476|SYNRG|11276|synergin, gamma	BC143478|SYNRG|11276|synergin, gamma	BC084536|SYNRG|11276|synergin, gamma	BC090930|SYNRG|11276|synergin, gamma	AF169548|SYNRG|11276|synergin, gamma	AK302821|SYNRG|11276|synergin, gamma	NM_001163544|SYNRG|11276|synergin, gamma	NM_001163545|SYNRG|11276|synergin, gamma	NM_001163546|SYNRG|11276|synergin, gamma	NM_001163547|SYNRG|11276|synergin, gamma	NM_007247|SYNRG|11276|synergin, gamma	NM_080550|SYNRG|11276|synergin, gamma	NM_198882|SYNRG|11276|synergin, gamma
hg18_v1_chr1_+_153213740_153213766	0.010347	SOX2.p2	NM_001826|CKS1B|1163|CDC28 protein kinase regulatory subunit 1B
hg18_v1_chr12_+_27755028_27755055	0.0103416	SOX2.p2	BC015862|MRPS35|60488|mitochondrial ribosomal protein S35	AK075378|MRPS35|60488|mitochondrial ribosomal protein S35	AK075515|MRPS35|60488|mitochondrial ribosomal protein S35	BC109372|MRPS35|60488|mitochondrial ribosomal protein S35	CR612857|MRPS35|60488|mitochondrial ribosomal protein S35	BC063515|MRPS35|60488|mitochondrial ribosomal protein S35	CR595120|MRPS35|60488|mitochondrial ribosomal protein S35	CR624689|MRPS35|60488|mitochondrial ribosomal protein S35	BC028346|MRPS35|60488|mitochondrial ribosomal protein S35
hg18_v1_chr1_+_107400789_107400988	0.0103146	SOX2.p2	NM_018137|PRMT6|55170|protein arginine methyltransferase 6	BC073866|PRMT6|55170|protein arginine methyltransferase 6	AK226009|PRMT6|55170|protein arginine methyltransferase 6	AK295541|PRMT6|55170|protein arginine methyltransferase 6	AK297898|PRMT6|55170|protein arginine methyltransferase 6	AY043278|PRMT6|55170|protein arginine methyltransferase 6	CR621406|PRMT6|55170|protein arginine methyltransferase 6	BC013866|PRMT6|55170|protein arginine methyltransferase 6	AK001421|PRMT6|55170|protein arginine methyltransferase 6	BC002729|PRMT6|55170|protein arginine methyltransferase 6	BC063446|PRMT6|55170|protein arginine methyltransferase 6
hg18_v1_chr19_+_45546369_45546492	0.0103023	SOX2.p2	CR595516|PLD3|23646|phospholipase D family, member 3	BC036327|PLD3|23646|phospholipase D family, member 3	CR623588|PLD3|23646|phospholipase D family, member 3	AK293690|PLD3|23646|phospholipase D family, member 3	BC096820|PLD3|23646|phospholipase D family, member 3
hg18_v1_chr13_+_52500830_52500996	0.0102794	SOX2.p2	AK000683|OLFM4|10562|olfactomedin 4	BC117329|OLFM4|10562|olfactomedin 4	AY358567|OLFM4|10562|olfactomedin 4	NM_006418|OLFM4|10562|olfactomedin 4	AF097021|OLFM4|10562|olfactomedin 4	AK300947|OLFM4|10562|olfactomedin 4
hg18_v1_chr1_-_115070413_115070531	0.0102564	SOX2.p2	BC021692|CSDE1|7812|cold shock domain containing E1, RNA-binding	CR594529|CSDE1|7812|cold shock domain containing E1, RNA-binding
hg18_v1_chr19_+_3713671_3713677	0.010243	SOX2.p2	BC065273|MRPL54|116541|mitochondrial ribosomal protein L54
hg18_v1_chr3_+_182900081_182900092	0.0102395	SOX2.p2	BC016393|SOX2OT|347689|SOX2 overlapping transcript (non-protein coding)	AL157425|SOX2OT|347689|SOX2 overlapping transcript (non-protein coding)
hg18_v1_chrX_-_46289765_46289835	0.0102112	SOX2.p2	AK295054|ZNF674|641339|zinc finger protein 674	AK308986|ZNF674|641339|zinc finger protein 674	AY971607|ZNF674|641339|zinc finger protein 674	NM_001039891|ZNF674|641339|zinc finger protein 674	NM_001146291|ZNF674|641339|zinc finger protein 674	NM_001190417|ZNF674|641339|zinc finger protein 674
hg18_v1_chr7_-_148211533_148211559	0.0102075	SOX2.p2	AK302216|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)
hg18_v1_chr1_-_199742589_199742589	0.0101938	SOX2.p2	AK290133|CSRP1|1465|cysteine and glycine-rich protein 1	NM_001193571|CSRP1|1465|cysteine and glycine-rich protein 1
hg18_v1_chr8_-_124123672_124123705	0.0101611	SOX2.p2	BC002457|DERL1|79139|Der1-like domain family, member 1
hg18_v1_chr2_+_152899837_152899996	0.0101281	SOX2.p2	NM_052905|FMNL2|114793|formin-like 2
hg18_v1_chr3_-_169295752_169295867	0.0101011	SOX2.p2	U55853|GOLIM4|27333|golgi integral membrane protein 4	BC143232|GOLIM4|27333|golgi integral membrane protein 4	BC143233|GOLIM4|27333|golgi integral membrane protein 4	BC171748|GOLIM4|27333|golgi integral membrane protein 4
hg18_v1_chr2_-_138762909_138762922	0.0100913	SOX2.p2	
hg18_v1_chr1_-_152162074_152162076	0.0100651	SOX2.p2	AK094665|GATAD2B|57459|GATA zinc finger domain containing 2B	NM_020699|GATAD2B|57459|GATA zinc finger domain containing 2B
hg18_v1_chr15_-_38118608_38118680	0.0100433	SOX2.p2	AB451391|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	CR620250|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	X73459|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	BC071716|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	U07857|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	BC100031|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	CR610442|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	CR596116|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	BC035495|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	CR610388|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	BC051006|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	CR614758|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	AB061546|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	NM_003134|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)
hg18_v1_chr10_+_11087280_11087303	0.0100304	SOX2.p2	AF090693|CELF2|10659|CUGBP, Elav-like family member 2	AK297380|CELF2|10659|CUGBP, Elav-like family member 2
hg18_v1_chr17_+_40141501_40141576	0.0100078	SOX2.p2	BC016158|DBF4B|80174|DBF4 homolog B (S. cerevisiae)	NM_025104|DBF4B|80174|DBF4 homolog B (S. cerevisiae)	NM_145663|DBF4B|80174|DBF4 homolog B (S. cerevisiae)	AK303282|DBF4B|80174|DBF4 homolog B (S. cerevisiae)	AK023149|DBF4B|80174|DBF4 homolog B (S. cerevisiae)	AF448801|DBF4B|80174|DBF4 homolog B (S. cerevisiae)
hg18_v1_chr8_-_72919241_72919284	0.0100009	SOX2.p2	AK313102|MSC|9242|musculin	BC006313|MSC|9242|musculin	BC067827|MSC|9242|musculin	NM_005098|MSC|9242|musculin
hg18_v1_chr4_-_120769590_120769631	0.00996544	SOX2.p2	
hg18_v1_chr9_+_112470871_112471004	0.00993147	SOX2.p2	NM_001166280|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	NM_001166281|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	NM_005592|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	AF006464|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	BC109098|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	BC109099|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	EU832778|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	EU832779|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	GQ129313|MUSK|4593|muscle, skeletal, receptor tyrosine kinase
hg18_v1_chr1_+_224317030_224317035	0.00992727	SOX2.p2	AK311905|H3F3A|3020|H3 histone, family 3A
hg18_v1_chr3_+_128830656_128830788	0.00991119	SOX2.p2	CR604786|PODXL2|50512|podocalyxin-like 2	BC019330|PODXL2|50512|podocalyxin-like 2	AY359096|PODXL2|50512|podocalyxin-like 2	NM_015720|PODXL2|50512|podocalyxin-like 2	BC052585|PODXL2|50512|podocalyxin-like 2	AF219137|PODXL2|50512|podocalyxin-like 2	CR596999|PODXL2|50512|podocalyxin-like 2
hg18_v1_chr16_+_2504001_2504105	0.00984705	SOX2.p2	CR600796|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	CR590083|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	CR616464|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	BT007155|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	CR541930|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	CR541951|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c
hg18_v1_chr3_+_171112053_171112175	0.00984303	SOX2.p2	BX648991|SAMD7|344658|sterile alpha motif domain containing 7	BX648534|SAMD7|344658|sterile alpha motif domain containing 7	BX648989|SAMD7|344658|sterile alpha motif domain containing 7	BX537903|SAMD7|344658|sterile alpha motif domain containing 7	NM_182610|SAMD7|344658|sterile alpha motif domain containing 7
hg18_v1_chr19_-_16103996_16104128	0.0098044	SOX2.p2	
hg18_v1_chr17_+_7252225_7252225	0.0098034	SOX2.p2	AF376802|NLGN2|57555|neuroligin 2	NM_020795|NLGN2|57555|neuroligin 2
hg18_v1_chr5_-_49772940_49772958	0.00979888	SOX2.p2	CR621536|EMB|133418|embigin	AK300860|EMB|133418|embigin	BC059398|EMB|133418|embigin
hg18_v1_chr9_-_131637360_131637360	0.00979787	SOX2.p2	CR604621|C9orf78|51759|chromosome 9 open reading frame 78
hg18_v1_chrX_+_9392980_9393489	0.00976902	SOX2.p2	Y12781|TBL1X|6907|transducin (beta)-like 1X-linked	BC052304|TBL1X|6907|transducin (beta)-like 1X-linked	NM_005647|TBL1X|6907|transducin (beta)-like 1X-linked
hg18_v1_chr2_-_2314087_2314096	0.00975753	SOX2.p2	AK307797|MYT1L|23040|myelin transcription factor 1-like
hg18_v1_chr1_-_27099524_27099552	0.00975133	SOX2.p2	BC007767|GPATCH3|63906|G patch domain containing 3	CR619450|GPATCH3|63906|G patch domain containing 3	AL833886|GPATCH3|63906|G patch domain containing 3	AK308100|GPATCH3|63906|G patch domain containing 3	AK022517|GPATCH3|63906|G patch domain containing 3	AK057930|GPATCH3|63906|G patch domain containing 3	AK303183|GPATCH3|63906|G patch domain containing 3	CR936767|GPATCH3|63906|G patch domain containing 3	NM_022078|GPATCH3|63906|G patch domain containing 3
hg18_v1_chr10_+_26545599_26545744	0.0097433	SOX2.p2	M74826|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)	BC029517|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)	M81882|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)	BC126327|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)	BC126329|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)
hg18_v1_chr5_+_110455961_110456028	0.00970647	SOX2.p2	CR600030|WDR36|134430|WD repeat domain 36
hg18_v1_chr14_+_80491461_80491777	0.00970109	SOX2.p2	BC024205|TSHR|7253|thyroid stimulating hormone receptor	NM_000369|TSHR|7253|thyroid stimulating hormone receptor	NM_001018036|TSHR|7253|thyroid stimulating hormone receptor	NM_001142626|TSHR|7253|thyroid stimulating hormone receptor	M31774|TSHR|7253|thyroid stimulating hormone receptor	BC108653|TSHR|7253|thyroid stimulating hormone receptor	BC009237|TSHR|7253|thyroid stimulating hormone receptor	M73747|TSHR|7253|thyroid stimulating hormone receptor	M32215|TSHR|7253|thyroid stimulating hormone receptor	BC063613|TSHR|7253|thyroid stimulating hormone receptor	AB209207|TSHR|7253|thyroid stimulating hormone receptor	BC120972|TSHR|7253|thyroid stimulating hormone receptor	BC120973|TSHR|7253|thyroid stimulating hormone receptor	BC127628|TSHR|7253|thyroid stimulating hormone receptor	BC127629|TSHR|7253|thyroid stimulating hormone receptor	BC141970|TSHR|7253|thyroid stimulating hormone receptor	S49816|TSHR|7253|thyroid stimulating hormone receptor	AY429111|TSHR|7253|thyroid stimulating hormone receptor	S45272|TSHR|7253|thyroid stimulating hormone receptor
hg18_v1_chr10_-_105100684_105100832	0.00968818	SOX2.p2	CR625113|PCGF6|84108|polycomb group ring finger 6	EU446621|PCGF6|84108|polycomb group ring finger 6	EU447006|PCGF6|84108|polycomb group ring finger 6	BC007602|PCGF6|84108|polycomb group ring finger 6	AB047006|PCGF6|84108|polycomb group ring finger 6	AK027885|PCGF6|84108|polycomb group ring finger 6
hg18_v1_chr4_+_6768800_6768846	0.00964923	SOX2.p2	BC067815|CNO|55330|cappuccino homolog (mouse)	BC001818|CNO|55330|cappuccino homolog (mouse)	CR599774|CNO|55330|cappuccino homolog (mouse)	BC009890|CNO|55330|cappuccino homolog (mouse)	CR613059|CNO|55330|cappuccino homolog (mouse)
hg18_v1_chr6_-_38778900_38778931	0.00963897	SOX2.p2	NM_006708|GLO1|2739|glyoxalase I
hg18_v1_chr2_-_152740387_152740806	0.00961904	SOX2.p2	AM393419|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	DQ892427|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	DQ895641|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	AK292265|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	AK292847|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	AK310863|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	AF042273|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	AF042274|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	AL133600|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	BC022277|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	BC028740|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	NM_005843|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2
hg18_v1_chr3_-_63824544_63824848	0.00956854	SOX2.p2	AK027098|THOC7|80145|THO complex 7 homolog (Drosophila)	AF104914|THOC7|80145|THO complex 7 homolog (Drosophila)	NM_025075|THOC7|80145|THO complex 7 homolog (Drosophila)
hg18_v1_chrX_+_53466529_53466614	0.00956824	SOX2.p2	AK304179|RIBC1|158787|RIB43A domain with coiled-coils 1	AK057345|RIBC1|158787|RIB43A domain with coiled-coils 1	NM_144968|RIBC1|158787|RIB43A domain with coiled-coils 1	AK292871|RIBC1|158787|RIB43A domain with coiled-coils 1	AK290346|RIBC1|158787|RIB43A domain with coiled-coils 1	BC036767|RIBC1|158787|RIB43A domain with coiled-coils 1	NM_001031745|RIBC1|158787|RIB43A domain with coiled-coils 1
hg18_v1_chr1_-_17637398_17637500	0.0095573	SOX2.p2	BC142946|RCC2|55920|regulator of chromosome condensation 2
hg18_v1_chr6_-_38778893_38778897	0.00953776	SOX2.p2	AK293345|GLO1|2739|glyoxalase I	D13315|GLO1|2739|glyoxalase I
hg18_v1_chr4_+_5104140_5104223	0.00953287	SOX2.p2	AK313846|STK32B|55351|serine/threonine kinase 32B	AK292696|STK32B|55351|serine/threonine kinase 32B	BC069203|STK32B|55351|serine/threonine kinase 32B
hg18_v1_chr16_+_1143241_1143413	0.00952342	SOX2.p2	AF073931|CACNA1H|8912|calcium channel, voltage-dependent, T type, alpha 1H subunit	NM_001005407|CACNA1H|8912|calcium channel, voltage-dependent, T type, alpha 1H subunit	NM_021098|CACNA1H|8912|calcium channel, voltage-dependent, T type, alpha 1H subunit	AF051946|CACNA1H|8912|calcium channel, voltage-dependent, T type, alpha 1H subunit
hg18_v1_chr1_+_170768635_170768896	0.00943622	SOX2.p2	AK302949|C1orf9|51430|chromosome 1 open reading frame 9	AJ250075|C1orf9|51430|chromosome 1 open reading frame 9	NM_014283|C1orf9|51430|chromosome 1 open reading frame 9
hg18_v1_chr3_-_14964403_14964530	0.00942907	SOX2.p2	
hg18_v1_chr5_+_110455768_110455948	0.00940433	SOX2.p2	AF385437|WDR36|134430|WD repeat domain 36	NM_139281|WDR36|134430|WD repeat domain 36	BC133025|WDR36|134430|WD repeat domain 36	BC136517|WDR36|134430|WD repeat domain 36	AK095312|WDR36|134430|WD repeat domain 36	AL832494|WDR36|134430|WD repeat domain 36
hg18_v1_chr10_+_80942362_80942362	0.00939753	SOX2.p2	BC070048|EIF5AL1|143244|eukaryotic translation initiation factor 5A-like 1	NM_001099692|EIF5AL1|143244|eukaryotic translation initiation factor 5A-like 1
hg18_v1_chr15_-_97608922_97608957	0.00934593	SOX2.p2	AK023230|TTC23|64927|tetratricopeptide repeat domain 23	AK291690|TTC23|64927|tetratricopeptide repeat domain 23
hg18_v1_chr5_-_54639158_54639279	0.00929788	SOX2.p2	BC056219|DHX29|54505|DEAH (Asp-Glu-Ala-His) box polypeptide 29	AY036974|DHX29|54505|DEAH (Asp-Glu-Ala-His) box polypeptide 29	AK308332|DHX29|54505|DEAH (Asp-Glu-Ala-His) box polypeptide 29	NM_019030|DHX29|54505|DEAH (Asp-Glu-Ala-His) box polypeptide 29	BX649135|DHX29|54505|DEAH (Asp-Glu-Ala-His) box polypeptide 29
hg18_v1_chr6_+_88174408_88174462	0.00928378	SOX2.p2	NM_001031743|C6orf165|154313|chromosome 6 open reading frame 165	BC035083|C6orf165|154313|chromosome 6 open reading frame 165	AK093830|C6orf165|154313|chromosome 6 open reading frame 165	BC045171|C6orf165|154313|chromosome 6 open reading frame 165
hg18_v1_chr6_-_38778898_38778899	0.00927225	SOX2.p2	AK312662|GLO1|2739|glyoxalase I
hg18_v1_chr1_+_229731021_229731088	0.00925399	SOX2.p2	FJ804217|TSNAX-DISC1|100303453|TSNAX-DISC1 read-through gene	FJ804218|TSNAX-DISC1|100303453|TSNAX-DISC1 read-through gene	FJ804219|TSNAX-DISC1|100303453|TSNAX-DISC1 read-through gene	FJ804220|TSNAX-DISC1|100303453|TSNAX-DISC1 read-through gene	FJ804221|TSNAX-DISC1|100303453|TSNAX-DISC1 read-through gene	FJ804222|TSNAX-DISC1|100303453|TSNAX-DISC1 read-through gene	FJ804223|TSNAX-DISC1|100303453|TSNAX-DISC1 read-through gene	FJ804224|TSNAX-DISC1|100303453|TSNAX-DISC1 read-through gene	NM_005999|TSNAX|7257|translin-associated factor X	X95073|TSNAX|7257|translin-associated factor X	BC011797|TSNAX|7257|translin-associated factor X	BC010376|TSNAX|7257|translin-associated factor X	AK313068|TSNAX|7257|translin-associated factor X
hg18_v1_chr14_-_105762742_105763023	0.00923202	SOX2.p2	
hg18_v1_chr1_+_203463654_203463759	0.00919325	SOX2.p2	AB007950|TMCC2|9911|transmembrane and coiled-coil domain family 2	NM_014858|TMCC2|9911|transmembrane and coiled-coil domain family 2	AK131419|TMCC2|9911|transmembrane and coiled-coil domain family 2
hg18_v1_chr6_-_137582237_137582239	0.00917963	SOX2.p2	BC005333|IFNGR1|3459|interferon gamma receptor 1
hg18_v1_chr12_+_100795480_100795698	0.00917784	SOX2.p2	AK297785|DRAM1|55332|DNA-damage regulated autophagy modulator 1	AK094923|DRAM1|55332|DNA-damage regulated autophagy modulator 1
hg18_v1_chr3_+_75796170_75796176	0.00917601	SOX2.p2	AK000525|FLJ20518|647476|FSHD region gene 2 family, member C pseudogene	NM_001124759|FRG2C|100288801|FSHD region gene 2 family, member C
hg18_v1_chr4_+_39084867_39084891	0.0091604	SOX2.p2	AB079373|KLB|152831|klotho beta	NM_175737|KLB|152831|klotho beta
hg18_v1_chr3_-_195835298_195835497	0.00915084	SOX2.p2	BC014883|TMEM44|93109|transmembrane protein 44	BC130297|TMEM44|93109|transmembrane protein 44	BC144158|TMEM44|93109|transmembrane protein 44	BC144159|TMEM44|93109|transmembrane protein 44	BC111485|TMEM44|93109|transmembrane protein 44	NM_001011655|TMEM44|93109|transmembrane protein 44	NM_001166305|TMEM44|93109|transmembrane protein 44	NM_001166306|TMEM44|93109|transmembrane protein 44	NM_138399|TMEM44|93109|transmembrane protein 44
hg18_v1_chr7_+_100047877_100048139	0.00914565	SOX2.p2	NM_001040098|MOSPD3|64598|motile sperm domain containing 3	NM_001040099|MOSPD3|64598|motile sperm domain containing 3	NM_023948|MOSPD3|64598|motile sperm domain containing 3	BC011653|MOSPD3|64598|motile sperm domain containing 3	BC009482|MOSPD3|64598|motile sperm domain containing 3	BC028475|MOSPD3|64598|motile sperm domain containing 3	BC005042|MOSPD3|64598|motile sperm domain containing 3	CR608430|MOSPD3|64598|motile sperm domain containing 3
hg18_v1_chr17_+_72880967_72881074	0.0091311	SOX2.p2	AK304143|SEPT9|10801|septin 9
hg18_v1_chr6_-_33276141_33276231	0.00912329	SOX2.p2	BT007280|RXRB|6257|retinoid X receptor, beta
hg18_v1_chr3_-_185085352_185085361	0.00911376	SOX2.p2	AK024765|PARL|55486|presenilin associated, rhomboid-like
hg18_v1_chr3_-_127138571_127138576	0.00908695	SOX2.p2	BC073816|ALG1L|200810|asparagine-linked glycosylation 1-like	NM_001015050|ALG1L|200810|asparagine-linked glycosylation 1-like	NM_001195223|ALG1L|200810|asparagine-linked glycosylation 1-like
hg18_v1_chr9_-_138454071_138454087	0.00907187	SOX2.p2	BC028032|INPP5E|56623|inositol polyphosphate-5-phosphatase, 72 kDa	NM_019892|INPP5E|56623|inositol polyphosphate-5-phosphatase, 72 kDa
hg18_v1_chr6_-_52549774_52549847	0.00905515	SOX2.p2	AK291751|TRAM2|9697|translocation associated membrane protein 2	BC028121|TRAM2|9697|translocation associated membrane protein 2	NM_012288|TRAM2|9697|translocation associated membrane protein 2
hg18_v1_chr6_+_126112431_126112488	0.00905428	SOX2.p2	AF173901|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2
hg18_v1_chr5_+_60969392_60969392	0.00901365	SOX2.p2	AK094862|FLJ37543|285668|hypothetical protein FLJ37543	NM_173667|FLJ37543|285668|hypothetical protein FLJ37543
hg18_v1_chr5_+_132456293_132456311	0.00900199	SOX2.p2	AK315887|HSPA4|3308|heat shock 70kDa protein 4	AK311316|HSPA4|3308|heat shock 70kDa protein 4
hg18_v1_chr2_+_11212990_11213015	0.00898006	SOX2.p2	BC027625|PQLC3|130814|PQ loop repeat containing 3	NM_152391|PQLC3|130814|PQ loop repeat containing 3
hg18_v1_chr1_+_20081424_20081478	0.00896222	SOX2.p2	NM_015207|OTUD3|23252|OTU domain containing 3
hg18_v1_chr5_+_121325554_121325626	0.00895442	SOX2.p2	AK058015|SRFBP1|153443|serum response factor binding protein 1	NM_152546|SRFBP1|153443|serum response factor binding protein 1	BC031222|SRFBP1|153443|serum response factor binding protein 1	AY611630|SRFBP1|153443|serum response factor binding protein 1
hg18_v1_chr6_+_31891259_31891285	0.00892447	SOX2.p2	CR595673|HSPA1A|3303|heat shock 70kDa protein 1A	CR603812|HSPA1A|3303|heat shock 70kDa protein 1A	CR608110|HSPA1A|3303|heat shock 70kDa protein 1A	CR618761|HSPA1A|3303|heat shock 70kDa protein 1A	NM_005345|HSPA1A|3303|heat shock 70kDa protein 1A	CR598680|HSPA1A|3303|heat shock 70kDa protein 1A	CR599258|HSPA1A|3303|heat shock 70kDa protein 1A	CR605652|HSPA1A|3303|heat shock 70kDa protein 1A	CR606872|HSPA1A|3303|heat shock 70kDa protein 1A	CR621778|HSPA1A|3303|heat shock 70kDa protein 1A	CR624878|HSPA1A|3303|heat shock 70kDa protein 1A	CR626292|HSPA1A|3303|heat shock 70kDa protein 1A
hg18_v1_chr2_+_201756048_201756162	0.0089209	SOX2.p2	AK310746|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	U86214|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	AK304859|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	AK225475|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	AY690601|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	BC042844|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	U60519|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	AJ487678|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	AJ487679|CASP10|843|caspase 10, apoptosis-related cysteine peptidase
hg18_v1_chr5_+_177415181_177415187	0.00890052	SOX2.p2	
hg18_v1_chr6_+_126112417_126112424	0.00888306	SOX2.p2	NM_012259|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2
hg18_v1_chr4_-_84595967_84596048	0.00882463	SOX2.p2	BC095473|HELQ|113510|helicase, POLQ-like	BC011863|HELQ|113510|helicase, POLQ-like	BC065814|HELQ|113510|helicase, POLQ-like	BC111502|HELQ|113510|helicase, POLQ-like	AK308395|HELQ|113510|helicase, POLQ-like	AF436845|HELQ|113510|helicase, POLQ-like	AK312725|HELQ|113510|helicase, POLQ-like	AK128665|HELQ|113510|helicase, POLQ-like	BC015428|HELQ|113510|helicase, POLQ-like	NM_133636|HELQ|113510|helicase, POLQ-like
hg18_v1_chr4_+_140806536_140806632	0.00881985	SOX2.p2	AK307231|MGST2|4258|microsomal glutathione S-transferase 2	U77604|MGST2|4258|microsomal glutathione S-transferase 2	CR407640|MGST2|4258|microsomal glutathione S-transferase 2	DQ893384|MGST2|4258|microsomal glutathione S-transferase 2	DQ896704|MGST2|4258|microsomal glutathione S-transferase 2
hg18_v1_chr12_+_103904203_103904237	0.0087947	SOX2.p2	NM_152318|C12orf45|121053|chromosome 12 open reading frame 45
hg18_v1_chrX_+_151860870_151860900	0.00875727	SOX2.p2	NM_001178115|ZNF185|7739|zinc finger protein 185 (LIM domain)	AK095258|ZNF185|7739|zinc finger protein 185 (LIM domain)
hg18_v1_chr10_-_105100834_105100866	0.00875573	SOX2.p2	AK290679|PCGF6|84108|polycomb group ring finger 6
hg18_v1_chr17_-_4216563_4216751	0.00870632	SOX2.p2	AK313059|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, yeast)	BC002775|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, yeast)	CR623407|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, yeast)	NM_003342|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, yeast)
hg18_v1_chr12_-_30721410_30721444	0.00869969	SOX2.p2	AK302260|IPO8|10526|importin 8	NM_001190995|IPO8|10526|importin 8
hg18_v1_chr1_-_149586298_149586326	0.00868088	SOX2.p2	X85786|RFX5|5993|regulatory factor X, 5 (influences HLA class II expression)	BC017471|RFX5|5993|regulatory factor X, 5 (influences HLA class II expression)
hg18_v1_chr5_-_172976259_172976299	0.00861941	SOX2.p2	BC007436|BOD1|91272|biorientation of chromosomes in cell division 1	NM_001159651|BOD1|91272|biorientation of chromosomes in cell division 1	NM_138369|BOD1|91272|biorientation of chromosomes in cell division 1
hg18_v1_chr6_+_71333327_71333366	0.00861932	SOX2.p2	BC018085|C6orf57|135154|chromosome 6 open reading frame 57	NM_145267|C6orf57|135154|chromosome 6 open reading frame 57	BC104649|C6orf57|135154|chromosome 6 open reading frame 57	GQ129294|C6orf57|135154|chromosome 6 open reading frame 57	GQ129295|C6orf57|135154|chromosome 6 open reading frame 57
hg18_v1_chr17_-_3248453_3248453	0.00860601	SOX2.p2	NM_003553|OR1E1|8387|olfactory receptor, family 1, subfamily E, member 1
hg18_v1_chr4_+_5104365_5104491	0.00859436	SOX2.p2	AJ250839|STK32B|55351|serine/threonine kinase 32B	NM_018401|STK32B|55351|serine/threonine kinase 32B	BC038238|STK32B|55351|serine/threonine kinase 32B	DQ890554|STK32B|55351|serine/threonine kinase 32B	DQ893714|STK32B|55351|serine/threonine kinase 32B
hg18_v1_chr2_-_131838200_131838200	0.00853738	SOX2.p2	NM_001077637|LOC150786|150786|RAB6C-like
hg18_v1_chr2_-_106177188_106177192	0.00852284	SOX2.p2	AK075120|UXS1|80146|UDP-glucuronate decarboxylase 1	AK075170|UXS1|80146|UDP-glucuronate decarboxylase 1	AK122696|UXS1|80146|UDP-glucuronate decarboxylase 1
hg18_v1_chr20_-_5539487_5539688	0.00852117	SOX2.p2	AB037855|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)	AK308111|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)	BC027588|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)	NM_019593|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)
hg18_v1_chr1_-_31485320_31485324	0.00851814	SOX2.p2	NM_024522|NKAIN1|79570|Na+/K+ transporting ATPase interacting 1
hg18_v1_chr8_+_30072463_30072507	0.00849527	SOX2.p2	NM_001128208|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	NM_015344|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	BC000642|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	AF063605|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	AY277595|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	AY358674|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	CR605624|LEPROTL1|23484|leptin receptor overlapping transcript-like 1
hg18_v1_chr12_+_22090485_22090506	0.00848389	SOX2.p2	CR625607|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase	AF271388|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase	CR622845|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase	CR614682|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase	AF397212|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase
hg18_v1_chr1_+_100590595_100590615	0.00846725	SOX2.p2	NM_003672|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)	NM_033312|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)	NM_033313|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)
hg18_v1_chr15_-_43267139_43267327	0.00843352	SOX2.p2	CR607464|SHF|90525|Src homology 2 domain containing F	CR626127|SHF|90525|Src homology 2 domain containing F	CR610652|SHF|90525|Src homology 2 domain containing F
hg18_v1_chr10_-_105100888_105100896	0.00840009	SOX2.p2	AK309105|PCGF6|84108|polycomb group ring finger 6
hg18_v1_chr11_-_62445587_62445711	0.00838127	SOX2.p2	BC022984|CHRM1|1128|cholinergic receptor, muscarinic 1	NM_000738|CHRM1|1128|cholinergic receptor, muscarinic 1	AJ006520|CHRM1|1128|cholinergic receptor, muscarinic 1
hg18_v1_chr16_-_2776606_2776842	0.00837551	SOX2.p2	AF536382|PRSS33|260429|protease, serine, 33	BC062334|PRSS33|260429|protease, serine, 33	NM_152891|PRSS33|260429|protease, serine, 33
hg18_v1_chr10_-_44775110_44775116	0.00837314	SOX2.p2	CR598948|LOC220980|220980|hypothetical LOC220980	CR614419|LOC220980|220980|hypothetical LOC220980
hg18_v1_chr1_-_108544261_108544325	0.00837091	SOX2.p2	AF123303|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24	EU832524|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24	EU832606|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24	AJ619987|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24	AK316506|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24
hg18_v1_chr11_-_18566758_18566897	0.00836235	SOX2.p2	AK295501|UEVLD|55293|UEV and lactate/malate dehyrogenase domains	BC011011|UEVLD|55293|UEV and lactate/malate dehyrogenase domains	CR616778|UEVLD|55293|UEV and lactate/malate dehyrogenase domains	BC064566|UEVLD|55293|UEV and lactate/malate dehyrogenase domains	AF503350|UEVLD|55293|UEV and lactate/malate dehyrogenase domains	AK296835|UEVLD|55293|UEV and lactate/malate dehyrogenase domains	AK316191|UEVLD|55293|UEV and lactate/malate dehyrogenase domains	AK301537|UEVLD|55293|UEV and lactate/malate dehyrogenase domains	NM_001040697|UEVLD|55293|UEV and lactate/malate dehyrogenase domains	NM_018314|UEVLD|55293|UEV and lactate/malate dehyrogenase domains	AK314521|UEVLD|55293|UEV and lactate/malate dehyrogenase domains
hg18_v1_chr7_+_102502852_102503055	0.00835047	SOX2.p2	CR618507|ARMC10|83787|armadillo repeat containing 10	CR613957|ARMC10|83787|armadillo repeat containing 10	AF275808|ARMC10|83787|armadillo repeat containing 10
hg18_v1_chr11_-_2970153_2970198	0.00830514	SOX2.p2	NM_005969|NAP1L4|4676|nucleosome assembly protein 1-like 4	U77456|NAP1L4|4676|nucleosome assembly protein 1-like 4	AK312599|NAP1L4|4676|nucleosome assembly protein 1-like 4
hg18_v1_chr17_-_71611198_71611440	0.00828636	SOX2.p2	AK295871|EXOC7|23265|exocyst complex component 7	FJ457119|EXOC7|23265|exocyst complex component 7	FJ457120|EXOC7|23265|exocyst complex component 7	AK023832|EXOC7|23265|exocyst complex component 7	BC018466|EXOC7|23265|exocyst complex component 7	AB028990|EXOC7|23265|exocyst complex component 7	BC011045|EXOC7|23265|exocyst complex component 7	AK128278|EXOC7|23265|exocyst complex component 7	BC029432|EXOC7|23265|exocyst complex component 7	AK022397|EXOC7|23265|exocyst complex component 7	AL834324|EXOC7|23265|exocyst complex component 7
hg18_v1_chr1_-_49014993_49015176	0.00824463	SOX2.p2	BC011804|BEND5|79656|BEN domain containing 5	AK021650|BEND5|79656|BEN domain containing 5	NM_024603|BEND5|79656|BEN domain containing 5	BC007932|BEND5|79656|BEN domain containing 5
hg18_v1_chr6_+_73133152_73133205	0.00820656	SOX2.p2	NM_001168411|RIMS1|22999|regulating synaptic membrane exocytosis 1	AK300853|RIMS1|22999|regulating synaptic membrane exocytosis 1
hg18_v1_chr19_-_44214972_44215174	0.0082028	SOX2.p2	BC030060|FBXO27|126433|F-box protein 27	AF436061|FBXO27|126433|F-box protein 27	BC014527|FBXO27|126433|F-box protein 27	NM_178820|FBXO27|126433|F-box protein 27	CR615928|FBXO27|126433|F-box protein 27
hg18_v1_chr5_+_86599800_86599845	0.00819157	SOX2.p2	AB209106|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1	BC033015|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1
hg18_v1_chr6_+_3204184_3204292	0.00818083	SOX2.p2	AK126623|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4	AK095683|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4
hg18_v1_chr9_-_88159076_88159142	0.00817801	SOX2.p2	BC032456|ZCCHC6|79670|zinc finger, CCHC domain containing 6	CR616935|ZCCHC6|79670|zinc finger, CCHC domain containing 6
hg18_v1_chr22_+_42908589_42908589	0.0081012	SOX2.p2	NM_001137606|PARVG|64098|parvin, gamma
hg18_v1_chr19_-_41711009_41711087	0.00805141	SOX2.p2	BC042676|ZNF260|339324|zinc finger protein 260	CR609031|ZNF260|339324|zinc finger protein 260	AK291442|ZNF260|339324|zinc finger protein 260	NM_001012756|ZNF260|339324|zinc finger protein 260	NM_001166036|ZNF260|339324|zinc finger protein 260	NM_001166037|ZNF260|339324|zinc finger protein 260	NM_001166038|ZNF260|339324|zinc finger protein 260
hg18_v1_chr11_-_65382313_65382379	0.00804287	SOX2.p2	CR617396|CFL1|1072|cofilin 1 (non-muscle)	NM_005507|CFL1|1072|cofilin 1 (non-muscle)
hg18_v1_chr6_+_50789215_50789215	0.00803098	SOX2.p2	AY028376|TFAP2D|83741|transcription factor AP-2 delta (activating enhancer binding protein 2 delta)	NM_172238|TFAP2D|83741|transcription factor AP-2 delta (activating enhancer binding protein 2 delta)
hg18_v1_chr16_+_68353738_68353777	0.00801545	SOX2.p2	BC064531|WWP2|11060|WW domain containing E3 ubiquitin protein ligase 2	AJ001982|WWP2|11060|WW domain containing E3 ubiquitin protein ligase 2	NM_007014|WWP2|11060|WW domain containing E3 ubiquitin protein ligase 2	NM_199423|WWP2|11060|WW domain containing E3 ubiquitin protein ligase 2	U96114|WWP2|11060|WW domain containing E3 ubiquitin protein ligase 2
hg18_v1_chr3_+_130014957_130015132	0.00800681	SOX2.p2	CR619444|RAB7A|7879|RAB7A, member RAS oncogene family
hg18_v1_chr4_-_111339201_111339268	0.00800639	SOX2.p2	BC001305|ELOVL6|79071|ELOVL family member 6, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)	AK027031|ELOVL6|79071|ELOVL family member 6, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)	NM_001130721|ELOVL6|79071|ELOVL family member 6, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)	NM_024090|ELOVL6|79071|ELOVL family member 6, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)
hg18_v1_chr8_-_17986690_17986787	0.00799616	SOX2.p2	AK025732|ASAH1|427|N-acylsphingosine amidohydrolase (acid ceramidase) 1	BC016828|ASAH1|427|N-acylsphingosine amidohydrolase (acid ceramidase) 1	NM_001127505|ASAH1|427|N-acylsphingosine amidohydrolase (acid ceramidase) 1	NM_004315|ASAH1|427|N-acylsphingosine amidohydrolase (acid ceramidase) 1
hg18_v1_chr10_-_97311084_97311174	0.00798796	SOX2.p2	AB037717|SORBS1|10580|sorbin and SH3 domain containing 1	BC152463|SORBS1|10580|sorbin and SH3 domain containing 1	AK022468|SORBS1|10580|sorbin and SH3 domain containing 1	AK300407|SORBS1|10580|sorbin and SH3 domain containing 1	AK304753|SORBS1|10580|sorbin and SH3 domain containing 1	AL117472|SORBS1|10580|sorbin and SH3 domain containing 1	AM260536|SORBS1|10580|sorbin and SH3 domain containing 1	NM_015385|SORBS1|10580|sorbin and SH3 domain containing 1	NM_024991|SORBS1|10580|sorbin and SH3 domain containing 1
hg18_v1_chr3_+_157071141_157071157	0.00795382	SOX2.p2	AK291504|GMPS|8833|guanine monphosphate synthetase	BC012178|GMPS|8833|guanine monphosphate synthetase
hg18_v1_chr1_+_86943103_86943182	0.00793203	SOX2.p2	BC007455|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	CR600351|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	AF151819|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	AF257318|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	AF263293|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	DQ893029|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	DQ896273|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1
hg18_v1_chr1_-_245561613_245561667	0.00792761	SOX2.p2	BC007263|ZNF496|84838|zinc finger protein 496	NM_032752|ZNF496|84838|zinc finger protein 496
hg18_v1_chr6_+_26071255_26071398	0.00789985	SOX2.p2	CR607808|TRIM38|10475|tripartite motif containing 38	CR936707|TRIM38|10475|tripartite motif containing 38
hg18_v1_chr3_+_189425886_189425970	0.00788945	SOX2.p2	NM_001167671|LPP|4026|LIM domain containing preferred translocation partner in lipoma	BC130584|LPP|4026|LIM domain containing preferred translocation partner in lipoma	BC144076|LPP|4026|LIM domain containing preferred translocation partner in lipoma
hg18_v1_chr11_+_117983515_117983660	0.0078887	SOX2.p2	NM_001144758|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	NM_001144759|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	CR749783|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	BC098586|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	AB014538|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	AK295819|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	AL832373|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	AK074070|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	AK125783|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1
hg18_v1_chr8_-_144313293_144313427	0.00788094	SOX2.p2	AK314139|LY6H|4062|lymphocyte antigen 6 complex, locus H	NM_001130478|LY6H|4062|lymphocyte antigen 6 complex, locus H
hg18_v1_chr7_+_27746231_27746267	0.00784779	SOX2.p2	NM_001079864|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	NM_006024|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1
hg18_v1_chr6_-_76010169_76010229	0.00784051	SOX2.p2	CR407646|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)	CR542125|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)	X15822|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)	CR610116|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)	BC101826|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)	BC101828|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)	AK312154|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)
hg18_v1_chr2_+_136005423_136005638	0.00781576	SOX2.p2	BC001217|R3HDM1|23518|R3H domain containing 1	D21852|R3HDM1|23518|R3H domain containing 1	BC041093|R3HDM1|23518|R3H domain containing 1	NM_015361|R3HDM1|23518|R3H domain containing 1
hg18_v1_chr17_+_26060617_26060782	0.00781081	SOX2.p2	
hg18_v1_chr5_-_88215034_88215049	0.007742	SOX2.p2	NM_001193350|MEF2C|4208|myocyte enhancer factor 2C	NM_002397|MEF2C|4208|myocyte enhancer factor 2C
hg18_v1_chr3_+_115099007_115099092	0.00773964	SOX2.p2	AK304142|GRAMD1C|54762|GRAM domain containing 1C	NM_001172105|GRAMD1C|54762|GRAM domain containing 1C	AY358725|GRAMD1C|54762|GRAM domain containing 1C	AK292964|GRAMD1C|54762|GRAM domain containing 1C
hg18_v1_chrX_+_122923236_122923272	0.00772725	SOX2.p2	NM_001042750|STAG2|10735|stromal antigen 2	NM_001042751|STAG2|10735|stromal antigen 2	NM_006603|STAG2|10735|stromal antigen 2	AL831939|STAG2|10735|stromal antigen 2	BX641002|STAG2|10735|stromal antigen 2	CR749433|STAG2|10735|stromal antigen 2	BX641003|STAG2|10735|stromal antigen 2
hg18_v1_chr22_+_18485076_18485093	0.00770665	SOX2.p2	AK293502|RANBP1|5902|RAN binding protein 1	BC071998|RANBP1|5902|RAN binding protein 1
hg18_v1_chr5_-_111120764_111120807	0.00765849	SOX2.p2	CR605504|C5orf13|9315|chromosome 5 open reading frame 13	CR606026|C5orf13|9315|chromosome 5 open reading frame 13	CR608957|C5orf13|9315|chromosome 5 open reading frame 13	CR610267|C5orf13|9315|chromosome 5 open reading frame 13	CR611162|C5orf13|9315|chromosome 5 open reading frame 13	CR622215|C5orf13|9315|chromosome 5 open reading frame 13	CR594948|C5orf13|9315|chromosome 5 open reading frame 13	CR602516|C5orf13|9315|chromosome 5 open reading frame 13	CR612701|C5orf13|9315|chromosome 5 open reading frame 13	CR625954|C5orf13|9315|chromosome 5 open reading frame 13	CR602437|C5orf13|9315|chromosome 5 open reading frame 13	CR590608|C5orf13|9315|chromosome 5 open reading frame 13	BC019068|C5orf13|9315|chromosome 5 open reading frame 13	BX649051|C5orf13|9315|chromosome 5 open reading frame 13	BC072013|C5orf13|9315|chromosome 5 open reading frame 13	BC072443|C5orf13|9315|chromosome 5 open reading frame 13
hg18_v1_chr13_-_51631996_51631996	0.00763651	SOX2.p2	NM_001146099|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3	NM_002498|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3
hg18_v1_chr7_+_44802834_44802848	0.00761934	SOX2.p2	Y00052|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	CR609623|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	CR613992|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	DQ892625|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	DQ895865|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AB451307|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AB451438|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	CR456707|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)
hg18_v1_chr13_+_97403929_97403948	0.0076188	SOX2.p2	NM_002271|IPO5|3843|importin 5	BC045640|IPO5|3843|importin 5
hg18_v1_chr1_-_150805852_150805871	0.0075984	SOX2.p2	BC131716|LCE3E|353145|late cornified envelope 3E	NM_178435|LCE3E|353145|late cornified envelope 3E
hg18_v1_chr2_+_84986510_84986652	0.00759063	SOX2.p2	M92381|TMSB10|9168|thymosin beta 10	EU831614|TMSB10|9168|thymosin beta 10	EU831701|TMSB10|9168|thymosin beta 10	EU832349|TMSB10|9168|thymosin beta 10	EU832434|TMSB10|9168|thymosin beta 10
hg18_v1_chr1_+_224064365_224064425	0.00753407	SOX2.p2	AK313436|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)	NM_001136018|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)
hg18_v1_chr1_+_78217510_78217611	0.00752323	SOX2.p2	AK297985|DNAJB4|11080|DnaJ (Hsp40) homolog, subfamily B, member 4
hg18_v1_chr1_-_52116894_52116948	0.00750341	SOX2.p2	AY049784|NRD1|4898|nardilysin (N-arginine dibasic convertase)
hg18_v1_chr6_-_38778882_38778890	0.00748832	SOX2.p2	BC011365|GLO1|2739|glyoxalase I	CR596001|GLO1|2739|glyoxalase I
hg18_v1_chr1_-_245237952_245237957	0.00741271	SOX2.p2	BC041082|ZNF695|57116|zinc finger protein 695
hg18_v1_chr6_-_31736488_31736545	0.00741155	SOX2.p2	AJ245433|C6orf47|57827|chromosome 6 open reading frame 47	BC063584|C6orf47|57827|chromosome 6 open reading frame 47	BC012950|C6orf47|57827|chromosome 6 open reading frame 47	NM_021184|C6orf47|57827|chromosome 6 open reading frame 47
hg18_v1_chr7_+_141054621_141054621	0.00740716	SOX2.p2	AK131218|WEE2|494551|WEE1 homolog 2 (S. pombe)	NM_001105558|WEE2|494551|WEE1 homolog 2 (S. pombe)
hg18_v1_chr1_+_10381671_10381761	0.00739664	SOX2.p2	NM_002631|PGD|5226|phosphogluconate dehydrogenase	AK300952|PGD|5226|phosphogluconate dehydrogenase	AK290404|PGD|5226|phosphogluconate dehydrogenase	AK296889|PGD|5226|phosphogluconate dehydrogenase	AK303898|PGD|5226|phosphogluconate dehydrogenase	AK304423|PGD|5226|phosphogluconate dehydrogenase	CR607764|PGD|5226|phosphogluconate dehydrogenase	CR610062|PGD|5226|phosphogluconate dehydrogenase	CR610133|PGD|5226|phosphogluconate dehydrogenase	CR609478|PGD|5226|phosphogluconate dehydrogenase	BC000368|PGD|5226|phosphogluconate dehydrogenase	CR610891|PGD|5226|phosphogluconate dehydrogenase	CR608757|PGD|5226|phosphogluconate dehydrogenase	U30255|PGD|5226|phosphogluconate dehydrogenase	AK298830|PGD|5226|phosphogluconate dehydrogenase
hg18_v1_chr1_-_201422450_201422458	0.0073537	SOX2.p2	AK225266|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	AK225584|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	AK130142|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	AK130200|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)
hg18_v1_chr3_+_179759181_179759311	0.00733839	SOX2.p2	AF209747|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2	NM_005832|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2
hg18_v1_chr22_-_16020153_16020167	0.00733799	SOX2.p2	AF273271|CECR5|27440|cat eye syndrome chromosome region, candidate 5	CR601915|CECR5|27440|cat eye syndrome chromosome region, candidate 5	AK315156|CECR5|27440|cat eye syndrome chromosome region, candidate 5	CR606299|CECR5|27440|cat eye syndrome chromosome region, candidate 5	AK000461|CECR5|27440|cat eye syndrome chromosome region, candidate 5
hg18_v1_chr5_+_109053034_109053054	0.00732358	SOX2.p2	NM_002372|MAN2A1|4124|mannosidase, alpha, class 2A, member 1
hg18_v1_chrX_-_119487183_119487261	0.00729908	SOX2.p2	BC002965|LAMP2|3920|lysosomal-associated membrane protein 2	S79873|LAMP2|3920|lysosomal-associated membrane protein 2	U36336|LAMP2|3920|lysosomal-associated membrane protein 2	X77196|LAMP2|3920|lysosomal-associated membrane protein 2	AK295038|LAMP2|3920|lysosomal-associated membrane protein 2	NM_001122606|LAMP2|3920|lysosomal-associated membrane protein 2	NM_002294|LAMP2|3920|lysosomal-associated membrane protein 2	NM_013995|LAMP2|3920|lysosomal-associated membrane protein 2
hg18_v1_chr4_-_39655944_39656032	0.00729735	SOX2.p2	BC041361|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)	NM_001100399|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)	NM_001100400|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)
hg18_v1_chr3_+_23961739_23961899	0.0072645	SOX2.p2	NM_005126|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2	D16815|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2	AK313464|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2	BC045613|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2	CR602304|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2	BC070035|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2
hg18_v1_chr6_-_53321658_53321702	0.00722669	SOX2.p2	AB209798|ELOVL5|60481|ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)	AL136939|ELOVL5|60481|ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)	BC074503|ELOVL5|60481|ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)	BC067123|ELOVL5|60481|ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)
hg18_v1_chr6_-_76010231_76010363	0.00721617	SOX2.p2	NM_001865|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)
hg18_v1_chr14_+_49430109_49430204	0.00719733	SOX2.p2	AF047432|ARF6|382|ADP-ribosylation factor 6	AF493885|ARF6|382|ADP-ribosylation factor 6	BT019868|ARF6|382|ADP-ribosylation factor 6	CR541939|ARF6|382|ADP-ribosylation factor 6	CR541964|ARF6|382|ADP-ribosylation factor 6
hg18_v1_chr11_-_118167036_118167057	0.00718914	SOX2.p2	D17532|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
hg18_v1_chr22_+_23945611_23945611	0.00717273	SOX2.p2	NM_000496|CRYBB2|1415|crystallin, beta B2
hg18_v1_chr1_+_10413016_10413144	0.00712708	SOX2.p2	AF516753|APITD1-CORT|100526739|APITD1-CORT readthrough	BC029430|APITD1|378708|apoptosis-inducing, TAF9-like domain 1
hg18_v1_chr16_+_14835214_14835308	0.00712271	SOX2.p2	X57398|NOMO1|23420|NODAL modulator 1
hg18_v1_chr5_-_78845414_78845455	0.00710817	SOX2.p2	BC047438|HOMER1|9456|homer homolog 1 (Drosophila)	NM_004272|HOMER1|9456|homer homolog 1 (Drosophila)
hg18_v1_chr11_-_65871592_65871742	0.00704894	SOX2.p2	DQ892706|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	DQ895957|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	CR623114|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK075354|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK098779|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK225182|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	CR591559|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK294604|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	BC021965|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK293715|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AF029893|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK098389|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	CR617432|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	NM_006876|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1
hg18_v1_chr15_-_54997964_54998093	0.00703277	SOX2.p2	CR612225|LOC145783|145783|hypothetical LOC145783	AK096657|LOC145783|145783|hypothetical LOC145783
hg18_v1_chr7_-_21951946_21952068	0.00703254	SOX2.p2	AY161168|CDCA7L|55536|cell division cycle associated 7-like	AY161169|CDCA7L|55536|cell division cycle associated 7-like	BC009352|CDCA7L|55536|cell division cycle associated 7-like	AK095965|CDCA7L|55536|cell division cycle associated 7-like	BC025242|CDCA7L|55536|cell division cycle associated 7-like	BC032576|CDCA7L|55536|cell division cycle associated 7-like	AK300781|CDCA7L|55536|cell division cycle associated 7-like	BC039823|CDCA7L|55536|cell division cycle associated 7-like	AK022955|CDCA7L|55536|cell division cycle associated 7-like	AK292490|CDCA7L|55536|cell division cycle associated 7-like	NM_001127370|CDCA7L|55536|cell division cycle associated 7-like	NM_001127371|CDCA7L|55536|cell division cycle associated 7-like	NM_018719|CDCA7L|55536|cell division cycle associated 7-like
hg18_v1_chr15_-_89366689_89366859	0.00703041	SOX2.p2	BC016445|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	AK074863|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	AF201694|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	CR604260|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	AK315721|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	AF308803|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	AK027754|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	AK300608|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	AK293688|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	AK308480|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	NM_018668|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)
hg18_v1_chr17_-_77442753_77442757	0.00701139	SOX2.p2	BC052302|THOC4|10189|THO complex 4	NM_005782|THOC4|10189|THO complex 4
hg18_v1_chr6_+_118976134_118976183	0.00699419	SOX2.p2	NM_002667|PLN|5350|phospholamban	M63603|PLN|5350|phospholamban	AK311799|PLN|5350|phospholamban	BC005269|PLN|5350|phospholamban
hg18_v1_chr11_-_57927457_57927457	0.00697732	SOX2.p2	NM_001005469|OR5B3|441608|olfactory receptor, family 5, subfamily B, member 3
hg18_v1_chr1_-_117465872_117465936	0.0069729	SOX2.p2	AK023243|TRIM45|80263|tripartite motif containing 45	AK222901|TRIM45|80263|tripartite motif containing 45	CR595070|TRIM45|80263|tripartite motif containing 45	BC034943|TRIM45|80263|tripartite motif containing 45	AY669488|TRIM45|80263|tripartite motif containing 45	NM_001145635|TRIM45|80263|tripartite motif containing 45	NM_025188|TRIM45|80263|tripartite motif containing 45	CR602755|TRIM45|80263|tripartite motif containing 45
hg18_v1_chr19_+_10625987_10626105	0.00697277	SOX2.p2	U10324|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	BC048314|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	BC064836|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	AK293170|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	AK291205|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	AK294084|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	X98264|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	AK291617|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	BC001770|ILF3|3609|interleukin enhancer binding factor 3, 90kDa
hg18_v1_chr17_+_22982319_22982342	0.00696883	SOX2.p2	AB006782|LGALS9|3965|lectin, galactoside-binding, soluble, 9	AK223232|LGALS9|3965|lectin, galactoside-binding, soluble, 9
hg18_v1_chr12_-_54938385_54938447	0.00695009	SOX2.p2	NM_173595|ANKRD52|283373|ankyrin repeat domain 52	AB190990|ANKRD52|283373|ankyrin repeat domain 52	AK125379|ANKRD52|283373|ankyrin repeat domain 52
hg18_v1_chr19_+_4983899_4983900	0.00690417	SOX2.p2	
hg18_v1_chr19_-_864203_864223	0.00689965	SOX2.p2	CR616662|C19orf22|91300|chromosome 19 open reading frame 22	CR619216|C19orf22|91300|chromosome 19 open reading frame 22	CR616128|C19orf22|91300|chromosome 19 open reading frame 22	CR614470|C19orf22|91300|chromosome 19 open reading frame 22	CR622307|C19orf22|91300|chromosome 19 open reading frame 22
hg18_v1_chr1_-_17637576_17637619	0.00689154	SOX2.p2	BC042141|RCC2|55920|regulator of chromosome condensation 2
hg18_v1_chr17_-_60088773_60088881	0.00688224	SOX2.p2	CR936721|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2	NM_022739|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2
hg18_v1_chr17_+_54997667_54997871	0.00685667	SOX2.p2	AF461690|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	NM_001166301|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	NM_024612|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	BC024187|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	AK299151|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	AK095681|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	AF260270|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	AK226048|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	DQ890909|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	DQ894060|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40
hg18_v1_chr4_-_39655554_39655912	0.00685548	SOX2.p2	AK098331|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)	BC114218|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)
hg18_v1_chrX_-_101284026_101284100	0.00685226	SOX2.p2	BC071675|TCEAL6|158931|transcription elongation factor A (SII)-like 6	NM_001006938|TCEAL6|158931|transcription elongation factor A (SII)-like 6
hg18_v1_chr1_+_23568028_23568136	0.0068274	SOX2.p2	BC054115|C1orf213|148898|chromosome 1 open reading frame 213	BC068594|C1orf213|148898|chromosome 1 open reading frame 213	AK074989|C1orf213|148898|chromosome 1 open reading frame 213
hg18_v1_chr5_+_177368294_177368294	0.00679947	SOX2.p2	NM_001079527|FAM153C|653316|family with sequence similarity 153, member C
hg18_v1_chr6_-_44388964_44389045	0.00679841	SOX2.p2	AB033096|AARS2|57505|alanyl-tRNA synthetase 2, mitochondrial (putative)	BC131728|AARS2|57505|alanyl-tRNA synthetase 2, mitochondrial (putative)	NM_020745|AARS2|57505|alanyl-tRNA synthetase 2, mitochondrial (putative)
hg18_v1_chr4_-_2233606_2233637	0.00678912	SOX2.p2	BC002713|MXD4|10608|MAX dimerization protein 4
hg18_v1_chr8_-_22606653_22606806	0.00676987	SOX2.p2	AK292464|EGR3|1960|early growth response 3	AK313604|EGR3|1960|early growth response 3	X63741|EGR3|1960|early growth response 3	NM_004430|EGR3|1960|early growth response 3	S40832|EGR3|1960|early growth response 3
hg18_v1_chrX_-_131401319_131401398	0.00676758	SOX2.p2	AF491305|MBNL3|55796|muscleblind-like 3 (Drosophila)	EU446986|MBNL3|55796|muscleblind-like 3 (Drosophila)	BC074775|MBNL3|55796|muscleblind-like 3 (Drosophila)	BC074776|MBNL3|55796|muscleblind-like 3 (Drosophila)	AB077698|MBNL3|55796|muscleblind-like 3 (Drosophila)	AB077699|MBNL3|55796|muscleblind-like 3 (Drosophila)	AF467070|MBNL3|55796|muscleblind-like 3 (Drosophila)	AJ427918|MBNL3|55796|muscleblind-like 3 (Drosophila)	AJ427919|MBNL3|55796|muscleblind-like 3 (Drosophila)	AY072692|MBNL3|55796|muscleblind-like 3 (Drosophila)	NM_018388|MBNL3|55796|muscleblind-like 3 (Drosophila)	NM_133486|MBNL3|55796|muscleblind-like 3 (Drosophila)
hg18_v1_chr6_+_125516499_125516778	0.0067636	SOX2.p2	NM_001003396|TPD52L1|7164|tumor protein D52-like 1	NM_001003397|TPD52L1|7164|tumor protein D52-like 1	NM_003287|TPD52L1|7164|tumor protein D52-like 1	AK291866|TPD52L1|7164|tumor protein D52-like 1	U44427|TPD52L1|7164|tumor protein D52-like 1	BC002375|TPD52L1|7164|tumor protein D52-like 1	AK291872|TPD52L1|7164|tumor protein D52-like 1	AF208012|TPD52L1|7164|tumor protein D52-like 1	AK291887|TPD52L1|7164|tumor protein D52-like 1
hg18_v1_chr8_+_23442307_23442323	0.0067499	SOX2.p2	NM_016612|SLC25A37|51312|solute carrier family 25, member 37
hg18_v1_chr18_-_28247186_28247192	0.00670123	SOX2.p2	
hg18_v1_chr5_-_149446366_149446486	0.00669543	SOX2.p2	BC047521|CSF1R|1436|colony stimulating factor 1 receptor	AK304491|CSF1R|1436|colony stimulating factor 1 receptor	M25786|CSF1R|1436|colony stimulating factor 1 receptor
hg18_v1_chr12_-_92001543_92001625	0.00668364	SOX2.p2	S64030|RPL41P5|6172|ribosomal protein L41 pseudogene 5
hg18_v1_chr6_-_100123238_100123410	0.00668068	SOX2.p2	BC010135|CCNC|892|cyclin C	CR595249|CCNC|892|cyclin C	AK298558|CCNC|892|cyclin C	BC041123|CCNC|892|cyclin C	NM_001013399|CCNC|892|cyclin C	NM_005190|CCNC|892|cyclin C
hg18_v1_chr1_-_142559339_142559403	0.00666286	SOX2.p2	CR622951|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G	BC130376|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G	BC130378|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G	NM_001123068|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G
hg18_v1_chr9_-_131637321_131637359	0.00665678	SOX2.p2	AF218421|C9orf78|51759|chromosome 9 open reading frame 78	BC007664|C9orf78|51759|chromosome 9 open reading frame 78	BC017570|C9orf78|51759|chromosome 9 open reading frame 78
hg18_v1_chr1_+_63605912_63605925	0.00665525	SOX2.p2	AK022700|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)	BC001253|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)	AF102851|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)
hg18_v1_chr3_+_110611526_110611526	0.00662839	SOX2.p2	AK058092|FLJ25363|401082|hypothetical LOC401082	NM_001145553|FLJ25363|401082|hypothetical LOC401082
hg18_v1_chr6_+_90660906_90660908	0.0066257	SOX2.p2	AF296766|GJA10|84694|gap junction protein, alpha 10, 62kDa	NM_032602|GJA10|84694|gap junction protein, alpha 10, 62kDa
hg18_v1_chr21_-_31049566_31049616	0.00661969	SOX2.p2	NM_181619|KRTAP21-1|337977|keratin associated protein 21-1	AB096960|KRTAP21-1|337977|keratin associated protein 21-1	BC105029|KRTAP21-1|337977|keratin associated protein 21-1	BC105031|KRTAP21-1|337977|keratin associated protein 21-1
hg18_v1_chr17_-_36533903_36533944	0.00660939	SOX2.p2	DQ893629|KRTAP4-12|83755|keratin associated protein 4-12	EU176681|KRTAP4-12|83755|keratin associated protein 4-12	BC004180|KRTAP4-12|83755|keratin associated protein 4-12	BC004212|KRTAP4-12|83755|keratin associated protein 4-12	BC101159|KRTAP4-12|83755|keratin associated protein 4-12	BC101160|KRTAP4-12|83755|keratin associated protein 4-12	BC101161|KRTAP4-12|83755|keratin associated protein 4-12	BC101162|KRTAP4-12|83755|keratin associated protein 4-12	AJ406943|KRTAP4-12|83755|keratin associated protein 4-12	NM_031854|KRTAP4-12|83755|keratin associated protein 4-12
hg18_v1_chr17_+_72880831_72880866	0.00658781	SOX2.p2	AJ312319|SEPT9|10801|septin 9	NM_001113493|SEPT9|10801|septin 9
hg18_v1_chr4_-_83514061_83514147	0.00657568	SOX2.p2	CR621925|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	D55674|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	AK057836|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	D55672|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	BC023977|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	BC026015|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)
hg18_v1_chr12_-_70343656_70343699	0.00656496	SOX2.p2	
hg18_v1_chr19_+_43502301_43502355	0.00655726	SOX2.p2	AF117708|KCNK6|9424|potassium channel, subfamily K, member 6	NM_004823|KCNK6|9424|potassium channel, subfamily K, member 6	AK222545|KCNK6|9424|potassium channel, subfamily K, member 6	CR614493|KCNK6|9424|potassium channel, subfamily K, member 6	AK315653|KCNK6|9424|potassium channel, subfamily K, member 6	AF281302|KCNK6|9424|potassium channel, subfamily K, member 6
hg18_v1_chr17_-_44058612_44058963	0.00655532	SOX2.p2	AK056123|HOXB9|3219|homeobox B9	AK315480|HOXB9|3219|homeobox B9	BC015565|HOXB9|3219|homeobox B9	AK056414|HOXB9|3219|homeobox B9	NM_024017|HOXB9|3219|homeobox B9
hg18_v1_chr4_-_39205316_39205489	0.00654709	SOX2.p2	AF061016|UGDH|7358|UDP-glucose 6-dehydrogenase	AJ007702|UGDH|7358|UDP-glucose 6-dehydrogenase	BC022781|UGDH|7358|UDP-glucose 6-dehydrogenase	AK097930|UGDH|7358|UDP-glucose 6-dehydrogenase	AK297737|UGDH|7358|UDP-glucose 6-dehydrogenase
hg18_v1_chr5_-_172976212_172976257	0.00654242	SOX2.p2	CR599483|BOD1|91272|biorientation of chromosomes in cell division 1	CR607873|BOD1|91272|biorientation of chromosomes in cell division 1	CR592937|BOD1|91272|biorientation of chromosomes in cell division 1	AK301982|BOD1|91272|biorientation of chromosomes in cell division 1
hg18_v1_chr6_-_166502119_166502120	0.00652103	SOX2.p2	BC098425|T|6862|T, brachyury homolog (mouse)	NM_003181|T|6862|T, brachyury homolog (mouse)
hg18_v1_chr4_-_89299034_89299089	0.00643973	SOX2.p2	BC021281|ABCG2|9429|ATP-binding cassette, sub-family G (WHITE), member 2	NM_004827|ABCG2|9429|ATP-binding cassette, sub-family G (WHITE), member 2
hg18_v1_chr14_-_20642629_20642702	0.00641151	SOX2.p2	NM_001102454|ZNF219|51222|zinc finger protein 219
hg18_v1_chr7_-_23476497_23476549	0.00640573	SOX2.p2	BC065269|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3	BC019258|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3	BC051296|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3	U76705|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3	U97188|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3	AF117108|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3	NM_006547|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3
hg18_v1_chr1_+_153445629_153445679	0.00639658	SOX2.p2	CR605982|MTX1|4580|metaxin 1	CR614718|MTX1|4580|metaxin 1	BC035616|MTX1|4580|metaxin 1	CR591813|MTX1|4580|metaxin 1	CR619225|MTX1|4580|metaxin 1
hg18_v1_chr7_-_99536852_99536928	0.00639244	SOX2.p2	DQ895947|MCM7|4176|minichromosome maintenance complex component 7	EU176445|MCM7|4176|minichromosome maintenance complex component 7	BC009398|MCM7|4176|minichromosome maintenance complex component 7	AK293172|MCM7|4176|minichromosome maintenance complex component 7	AK226175|MCM7|4176|minichromosome maintenance complex component 7
hg18_v1_chr13_+_77007809_77007895	0.00636368	SOX2.p2	NM_001160706|SCEL|8796|sciellin	NM_003843|SCEL|8796|sciellin	NM_144777|SCEL|8796|sciellin	BC020726|SCEL|8796|sciellin	AF045941|SCEL|8796|sciellin	AK025320|SCEL|8796|sciellin	AK222720|SCEL|8796|sciellin	AK301659|SCEL|8796|sciellin
hg18_v1_chr13_-_83354425_83354428	0.00634169	SOX2.p2	BC051738|SLITRK1|114798|SLIT and NTRK-like family, member 1
hg18_v1_chr9_-_127043169_127043434	0.00634142	SOX2.p2	AF188611|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)	AF216292|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)	DQ892173|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)	DQ895368|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)	AJ271729|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)	BC020235|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)
hg18_v1_chr3_-_63824496_63824528	0.00630411	SOX2.p2	CR457373|THOC7|80145|THO complex 7 homolog (Drosophila)	BC065012|THOC7|80145|THO complex 7 homolog (Drosophila)	AK225110|THOC7|80145|THO complex 7 homolog (Drosophila)
hg18_v1_chr3_+_14964080_14964239	0.00629863	SOX2.p2	AK290590|NR2C2|7182|nuclear receptor subfamily 2, group C, member 2	L27586|NR2C2|7182|nuclear receptor subfamily 2, group C, member 2	NM_003298|NR2C2|7182|nuclear receptor subfamily 2, group C, member 2
hg18_v1_chr9_+_103200939_103201191	0.00627917	SOX2.p2	AK290163|ZNF189|7743|zinc finger protein 189	AK313655|ZNF189|7743|zinc finger protein 189	AK308935|ZNF189|7743|zinc finger protein 189	NM_003452|ZNF189|7743|zinc finger protein 189	NM_197977|ZNF189|7743|zinc finger protein 189	BC065718|ZNF189|7743|zinc finger protein 189	BC092425|ZNF189|7743|zinc finger protein 189	AF025770|ZNF189|7743|zinc finger protein 189	U75454|ZNF189|7743|zinc finger protein 189	U95992|ZNF189|7743|zinc finger protein 189	BC126120|ZNF189|7743|zinc finger protein 189	BC143876|ZNF189|7743|zinc finger protein 189	BC143877|ZNF189|7743|zinc finger protein 189
hg18_v1_chr6_-_96131974_96132046	0.0062757	SOX2.p2	
hg18_v1_chr20_-_39680405_39680546	0.00625508	SOX2.p2	BC039860|CHD6|84181|chromodomain helicase DNA binding protein 6	BC040016|CHD6|84181|chromodomain helicase DNA binding protein 6	AK296955|CHD6|84181|chromodomain helicase DNA binding protein 6	BC012516|CHD6|84181|chromodomain helicase DNA binding protein 6	AY034072|CHD6|84181|chromodomain helicase DNA binding protein 6	NM_032221|CHD6|84181|chromodomain helicase DNA binding protein 6
hg18_v1_chr12_-_119391794_119391880	0.00625018	SOX2.p2	U30825|SRSF9|8683|serine/arginine-rich splicing factor 9	CR607246|SRSF9|8683|serine/arginine-rich splicing factor 9	BC093971|SRSF9|8683|serine/arginine-rich splicing factor 9	BC093973|SRSF9|8683|serine/arginine-rich splicing factor 9	CR615364|SRSF9|8683|serine/arginine-rich splicing factor 9	CR617389|SRSF9|8683|serine/arginine-rich splicing factor 9	CR593564|SRSF9|8683|serine/arginine-rich splicing factor 9	AK290644|SRSF9|8683|serine/arginine-rich splicing factor 9	CR598070|SRSF9|8683|serine/arginine-rich splicing factor 9
hg18_v1_chr12_+_27754972_27755027	0.00624627	SOX2.p2	NM_001190864|MRPS35|60488|mitochondrial ribosomal protein S35	NM_021821|MRPS35|60488|mitochondrial ribosomal protein S35	AF182422|MRPS35|60488|mitochondrial ribosomal protein S35
hg18_v1_chr2_+_69910277_69910345	0.00623734	SOX2.p2	AK024042|GMCL1|64395|germ cell-less homolog 1 (Drosophila)	BC007420|GMCL1|64395|germ cell-less homolog 1 (Drosophila)	NM_178439|GMCL1|64395|germ cell-less homolog 1 (Drosophila)	AK023119|GMCL1|64395|germ cell-less homolog 1 (Drosophila)
hg18_v1_chrX_+_41078353_41078449	0.00621433	SOX2.p2	AK291153|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AK296906|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AK297159|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AK304689|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AK310891|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	BC055083|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AF086430|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	BC007668|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AF061337|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	BC011819|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AB208983|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AB451220|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AB451343|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked
hg18_v1_chr6_-_137582244_137582259	0.00619363	SOX2.p2	NM_000416|IFNGR1|3459|interferon gamma receptor 1
hg18_v1_chr6_-_38778860_38778880	0.00619158	SOX2.p2	AK129573|GLO1|2739|glyoxalase I	L07837|GLO1|2739|glyoxalase I	BC001741|GLO1|2739|glyoxalase I	CR617753|GLO1|2739|glyoxalase I	CR623176|GLO1|2739|glyoxalase I	CR603414|GLO1|2739|glyoxalase I	AL833442|GLO1|2739|glyoxalase I	CR619737|GLO1|2739|glyoxalase I
hg18_v1_chr1_+_118273887_118273916	0.0061762	SOX2.p2	NM_006784|WDR3|10885|WD repeat domain 3	AK292438|WDR3|10885|WD repeat domain 3	AF083217|WDR3|10885|WD repeat domain 3
hg18_v1_chr1_-_67292286_67292443	0.00617465	SOX2.p2	BC093786|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1	BC112031|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1	AB044343|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1	D87449|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1
hg18_v1_chr22_+_42908548_42908567	0.00617069	SOX2.p2	AK307299|PARVG|64098|parvin, gamma
hg18_v1_chr5_-_156935317_156935449	0.00613896	SOX2.p2	AF311317|ADAM19|8728|ADAM metallopeptidase domain 19	AF326918|ADAM19|8728|ADAM metallopeptidase domain 19	Y13786|ADAM19|8728|ADAM metallopeptidase domain 19	AK091464|ADAM19|8728|ADAM metallopeptidase domain 19	AK308182|ADAM19|8728|ADAM metallopeptidase domain 19	NM_033274|ADAM19|8728|ADAM metallopeptidase domain 19
hg18_v1_chr7_+_138675644_138675780	0.00613325	SOX2.p2	AK298166|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)
hg18_v1_chr14_-_76564727_76564899	0.00610976	SOX2.p2	NM_024496|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like	BC108292|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like
hg18_v1_chr13_-_50315832_50316075	0.00607191	SOX2.p2	AY357595|DLEU7|220107|deleted in lymphocytic leukemia, 7	BC104892|DLEU7|220107|deleted in lymphocytic leukemia, 7	BC112009|DLEU7|220107|deleted in lymphocytic leukemia, 7	NM_198989|DLEU7|220107|deleted in lymphocytic leukemia, 7	AK126830|DLEU7|220107|deleted in lymphocytic leukemia, 7
hg18_v1_chr12_-_52827275_52827422	0.0060671	SOX2.p2	
hg18_v1_chr15_+_36331411_36331963	0.0060659	SOX2.p2	AK091222|SPRED1|161742|sprouty-related, EVH1 domain containing 1	BC137480|SPRED1|161742|sprouty-related, EVH1 domain containing 1	BC137481|SPRED1|161742|sprouty-related, EVH1 domain containing 1
hg18_v1_chr12_-_41164010_41164041	0.00602507	SOX2.p2	AK122881|PRICKLE1|144165|prickle homolog 1 (Drosophila)
hg18_v1_chr7_-_136679045_136679117	0.00602302	SOX2.p2	CR609152|PTN|5764|pleiotrophin	CR624136|PTN|5764|pleiotrophin	CR619084|PTN|5764|pleiotrophin	BC005916|PTN|5764|pleiotrophin	NM_002825|PTN|5764|pleiotrophin	M57399|PTN|5764|pleiotrophin
hg18_v1_chr2_-_87156616_87157071	0.00601194	SOX2.p2	BC132791|LOC285074|285074|anaphase promoting complex subunit 1 pseudogene	BC132793|LOC285074|285074|anaphase promoting complex subunit 1 pseudogene
hg18_v1_chr1_+_20081495_20081507	0.00600749	SOX2.p2	AB007928|OTUD3|23252|OTU domain containing 3
hg18_v1_chr2_+_54536780_54537452	0.00598317	SOX2.p2	NM_003128|SPTBN1|6711|spectrin, beta, non-erythrocytic 1	AB371586|SPTBN1|6711|spectrin, beta, non-erythrocytic 1	AB209748|SPTBN1|6711|spectrin, beta, non-erythrocytic 1
hg18_v1_chr4_+_15089931_15089963	0.00596684	SOX2.p2	AB037766|CC2D2A|57545|coiled-coil and C2 domain containing 2A	BC103710|CC2D2A|57545|coiled-coil and C2 domain containing 2A
hg18_v1_chr5_+_53849251_53849353	0.0059463	SOX2.p2	AK304195|SNX18|112574|sorting nexin 18	NM_001145427|SNX18|112574|sorting nexin 18	BC060791|SNX18|112574|sorting nexin 18	BC067860|SNX18|112574|sorting nexin 18	NM_001102575|SNX18|112574|sorting nexin 18	NM_052870|SNX18|112574|sorting nexin 18
hg18_v1_chr20_-_44151952_44151969	0.00594316	SOX2.p2	AF230533|NCOA5|57727|nuclear receptor coactivator 5
hg18_v1_chr6_+_153113624_153113734	0.00591924	SOX2.p2	AK313950|VIP|7432|vasoactive intestinal peptide	BC009794|VIP|7432|vasoactive intestinal peptide	NM_003381|VIP|7432|vasoactive intestinal peptide	NM_194435|VIP|7432|vasoactive intestinal peptide	CR593090|VIP|7432|vasoactive intestinal peptide	AK291959|VIP|7432|vasoactive intestinal peptide	M36634|VIP|7432|vasoactive intestinal peptide
hg18_v1_chr17_+_77261440_77261446	0.00590863	SOX2.p2	D84064|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate
hg18_v1_chr11_+_63510478_63510514	0.00590515	SOX2.p2	BC010368|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	BC107701|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	CR616043|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	CR617285|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	AK303228|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	AF161381|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	AK225133|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	AL096714|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	AK091830|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	BC007519|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	CR604649|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	CR609035|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	CR617582|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	AY177200|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	CR604801|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	CR618522|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	CR598022|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	CR602250|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	CR598740|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	CR598561|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	CR599600|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	CR603813|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	CR617783|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1
hg18_v1_chr19_-_47155277_47155339	0.00590438	SOX2.p2	AF112996|RABAC1|10567|Rab acceptor 1 (prenylated)	CR612417|RABAC1|10567|Rab acceptor 1 (prenylated)	BT019964|RABAC1|10567|Rab acceptor 1 (prenylated)	CR457214|RABAC1|10567|Rab acceptor 1 (prenylated)	CR542116|RABAC1|10567|Rab acceptor 1 (prenylated)	AF112202|RABAC1|10567|Rab acceptor 1 (prenylated)	AJ133534|RABAC1|10567|Rab acceptor 1 (prenylated)	BC008950|RABAC1|10567|Rab acceptor 1 (prenylated)	CR591641|RABAC1|10567|Rab acceptor 1 (prenylated)
hg18_v1_chr16_+_66433722_66433801	0.00584162	SOX2.p2	AK289367|THAP11|57215|THAP domain containing 11	BC012182|THAP11|57215|THAP domain containing 11
hg18_v1_chr12_-_54995923_54996039	0.00579355	SOX2.p2	AF186113|CNPY2|10330|canopy 2 homolog (zebrafish)	AB015631|CNPY2|10330|canopy 2 homolog (zebrafish)	BC065015|CNPY2|10330|canopy 2 homolog (zebrafish)
hg18_v1_chr2_+_11213053_11213175	0.00577852	SOX2.p2	AK301439|PQLC3|130814|PQ loop repeat containing 3	AK313402|PQLC3|130814|PQ loop repeat containing 3	CR602070|PQLC3|130814|PQ loop repeat containing 3	CR624863|PQLC3|130814|PQ loop repeat containing 3
hg18_v1_chr19_+_46462169_46462170	0.00576271	SOX2.p2	AK291315|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1
hg18_v1_chr1_-_74971679_74971679	0.00575639	SOX2.p2	NM_001130042|CRYZ|1429|crystallin, zeta (quinone reductase)	NM_001130043|CRYZ|1429|crystallin, zeta (quinone reductase)	NM_001134759|CRYZ|1429|crystallin, zeta (quinone reductase)	NM_001889|CRYZ|1429|crystallin, zeta (quinone reductase)
hg18_v1_chr3_-_184628548_184628719	0.00573722	SOX2.p2	NM_015078|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2	BC064632|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2	AK124500|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2	AK310962|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2
hg18_v1_chr2_+_198089036_198089082	0.0056887	SOX2.p2	AF093825|MOBKL3|25843|MOB1, Mps One Binder kinase activator-like 3 (yeast)	AF151853|MOBKL3|25843|MOB1, Mps One Binder kinase activator-like 3 (yeast)	AK307497|MOBKL3|25843|MOB1, Mps One Binder kinase activator-like 3 (yeast)	AL080070|MOBKL3|25843|MOB1, Mps One Binder kinase activator-like 3 (yeast)	AB015441|MOBKL3|25843|MOB1, Mps One Binder kinase activator-like 3 (yeast)	AK297514|MOBKL3|25843|MOB1, Mps One Binder kinase activator-like 3 (yeast)	AJ580638|MOBKL3|25843|MOB1, Mps One Binder kinase activator-like 3 (yeast)	CR457371|MOBKL3|25843|MOB1, Mps One Binder kinase activator-like 3 (yeast)
hg18_v1_chr6_+_15357013_15357171	0.00568777	SOX2.p2	AK303610|JARID2|3720|jumonji, AT rich interactive domain 2
hg18_v1_chr19_+_54872304_54872363	0.00568624	SOX2.p2	AK295973|PRMT1|3276|protein arginine methyltransferase 1	CR595920|PRMT1|3276|protein arginine methyltransferase 1	NM_001536|PRMT1|3276|protein arginine methyltransferase 1	NM_198318|PRMT1|3276|protein arginine methyltransferase 1	CR594562|PRMT1|3276|protein arginine methyltransferase 1	CR615809|PRMT1|3276|protein arginine methyltransferase 1	CR618569|PRMT1|3276|protein arginine methyltransferase 1	CR614514|PRMT1|3276|protein arginine methyltransferase 1	CR625308|PRMT1|3276|protein arginine methyltransferase 1	CR593945|PRMT1|3276|protein arginine methyltransferase 1	CR606998|PRMT1|3276|protein arginine methyltransferase 1	CR593955|PRMT1|3276|protein arginine methyltransferase 1	CR608047|PRMT1|3276|protein arginine methyltransferase 1	CR607814|PRMT1|3276|protein arginine methyltransferase 1	BC019268|PRMT1|3276|protein arginine methyltransferase 1	CR597161|PRMT1|3276|protein arginine methyltransferase 1	CR597475|PRMT1|3276|protein arginine methyltransferase 1	CR620963|PRMT1|3276|protein arginine methyltransferase 1	AY775289|PRMT1|3276|protein arginine methyltransferase 1	D66904|PRMT1|3276|protein arginine methyltransferase 1	Y10805|PRMT1|3276|protein arginine methyltransferase 1	Y10806|PRMT1|3276|protein arginine methyltransferase 1	Y10807|PRMT1|3276|protein arginine methyltransferase 1	BC109282|PRMT1|3276|protein arginine methyltransferase 1	BC109283|PRMT1|3276|protein arginine methyltransferase 1
hg18_v1_chr3_-_185085362_185085383	0.0056736	SOX2.p2	BC003653|PARL|55486|presenilin associated, rhomboid-like
hg18_v1_chr16_+_1668284_1668290	0.00566605	SOX2.p2	BC060853|HN1L|90861|hematological and neurological expressed 1-like
hg18_v1_chr1_-_45444812_45444865	0.00565606	SOX2.p2	AB040944|ZSWIM5|57643|zinc finger, SWIM-type containing 5	NM_020883|ZSWIM5|57643|zinc finger, SWIM-type containing 5
hg18_v1_chr2_+_203901160_203901600	0.00565528	SOX2.p2	NM_005759|ABI2|10152|abl-interactor 2	AK302853|ABI2|10152|abl-interactor 2	AK294429|ABI2|10152|abl-interactor 2	AK299824|ABI2|10152|abl-interactor 2	AK316000|ABI2|10152|abl-interactor 2	BC001439|ABI2|10152|abl-interactor 2	AF260261|ABI2|10152|abl-interactor 2	BT009920|ABI2|10152|abl-interactor 2	DQ890735|ABI2|10152|abl-interactor 2	DQ893907|ABI2|10152|abl-interactor 2
hg18_v1_chr7_+_23252911_23252912	0.00563168	SOX2.p2	AK297055|GPNMB|10457|glycoprotein (transmembrane) nmb	AK303071|GPNMB|10457|glycoprotein (transmembrane) nmb	AK312279|GPNMB|10457|glycoprotein (transmembrane) nmb
hg18_v1_chrX_-_73751155_73751173	0.00562995	SOX2.p2	AK001334|RLIM|51132|ring finger protein, LIM domain interacting
hg18_v1_chr3_-_48344834_48344834	0.00560809	SOX2.p2	NM_001080525|SPINK8|646424|serine peptidase inhibitor, Kazal type 8 (putative)
hg18_v1_chr5_+_27508139_27508182	0.00560192	SOX2.p2	BC039509|LOC643401|643401|hypothetical protein LOC643401	BC046201|LOC643401|643401|hypothetical protein LOC643401
hg18_v1_chr5_+_1854493_1854531	0.00557265	SOX2.p2	NM_004553|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)	AK022503|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)	BC038664|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)	AF044959|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)	BC046155|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)	CR456880|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)
hg18_v1_chr1_+_148532885_148532964	0.00553564	SOX2.p2	NM_018997|MRPS21|54460|mitochondrial ribosomal protein S21	NM_031901|MRPS21|54460|mitochondrial ribosomal protein S21	AK289467|MRPS21|54460|mitochondrial ribosomal protein S21	CR610321|MRPS21|54460|mitochondrial ribosomal protein S21	AB049955|MRPS21|54460|mitochondrial ribosomal protein S21	BC004566|MRPS21|54460|mitochondrial ribosomal protein S21	BC006554|MRPS21|54460|mitochondrial ribosomal protein S21	U79258|MRPS21|54460|mitochondrial ribosomal protein S21
hg18_v1_chr18_+_11841388_11841510	0.0055231	SOX2.p2	NM_020412|CHMP1B|57132|chromatin modifying protein 1B	AK314068|CHMP1B|57132|chromatin modifying protein 1B	CR609374|CHMP1B|57132|chromatin modifying protein 1B	BC065933|CHMP1B|57132|chromatin modifying protein 1B	CR595824|CHMP1B|57132|chromatin modifying protein 1B	CR600805|CHMP1B|57132|chromatin modifying protein 1B	CR616002|CHMP1B|57132|chromatin modifying protein 1B	CR618865|CHMP1B|57132|chromatin modifying protein 1B	CR609924|CHMP1B|57132|chromatin modifying protein 1B	CR595721|CHMP1B|57132|chromatin modifying protein 1B	BC012733|CHMP1B|57132|chromatin modifying protein 1B	AF281064|CHMP1B|57132|chromatin modifying protein 1B	CR626295|CHMP1B|57132|chromatin modifying protein 1B
hg18_v1_chr1_-_32600430_32600430	0.0055186	SOX2.p2	NM_001167676|LOC100128071|100128071|hypothetical LOC100128071
hg18_v1_chr1_+_86662356_86662518	0.00551604	SOX2.p2	NM_006536|CLCA2|9635|chloride channel accessory 2	AF043977|CLCA2|9635|chloride channel accessory 2	AK290348|CLCA2|9635|chloride channel accessory 2	AK307937|CLCA2|9635|chloride channel accessory 2	BC041096|CLCA2|9635|chloride channel accessory 2	AB026833|CLCA2|9635|chloride channel accessory 2	AF127980|CLCA2|9635|chloride channel accessory 2
hg18_v1_chr11_+_16716723_16716749	0.00547958	SOX2.p2	NM_014267|C11orf58|10944|chromosome 11 open reading frame 58
hg18_v1_chr17_-_30414789_30414871	0.00546381	SOX2.p2	CR933651|RFFL|117584|ring finger and FYVE-like domain containing 1	NM_001017368|RFFL|117584|ring finger and FYVE-like domain containing 1
hg18_v1_chr3_+_99288706_99288706	0.00541677	SOX2.p2	NM_054106|OR5AC2|81050|olfactory receptor, family 5, subfamily AC, member 2
hg18_v1_chr19_-_6230927_6231004	0.00540103	SOX2.p2	D14539|MLLT1|4298|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1	NM_005934|MLLT1|4298|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1
hg18_v1_chrX_+_48219344_48219638	0.00538284	SOX2.p2	AK024023|FTSJ1|24140|FtsJ homolog 1 (E. coli)	NM_012280|FTSJ1|24140|FtsJ homolog 1 (E. coli)	NM_177439|FTSJ1|24140|FtsJ homolog 1 (E. coli)	AJ005892|FTSJ1|24140|FtsJ homolog 1 (E. coli)	AK297486|FTSJ1|24140|FtsJ homolog 1 (E. coli)	CR595767|FTSJ1|24140|FtsJ homolog 1 (E. coli)	CR595180|FTSJ1|24140|FtsJ homolog 1 (E. coli)	CR600255|FTSJ1|24140|FtsJ homolog 1 (E. coli)	CR616099|FTSJ1|24140|FtsJ homolog 1 (E. coli)	CR590233|FTSJ1|24140|FtsJ homolog 1 (E. coli)	CR613129|FTSJ1|24140|FtsJ homolog 1 (E. coli)	CR616867|FTSJ1|24140|FtsJ homolog 1 (E. coli)	CR606907|FTSJ1|24140|FtsJ homolog 1 (E. coli)	AK315138|FTSJ1|24140|FtsJ homolog 1 (E. coli)	CR609653|FTSJ1|24140|FtsJ homolog 1 (E. coli)	BC021047|FTSJ1|24140|FtsJ homolog 1 (E. coli)	BC023584|FTSJ1|24140|FtsJ homolog 1 (E. coli)
hg18_v1_chr9_-_115142354_115142440	0.00537552	SOX2.p2	AK074891|WDR31|114987|WD repeat domain 31	AL833635|WDR31|114987|WD repeat domain 31	BC022982|WDR31|114987|WD repeat domain 31	AK093240|WDR31|114987|WD repeat domain 31	BC012352|WDR31|114987|WD repeat domain 31	AK313843|WDR31|114987|WD repeat domain 31	NM_001012361|WDR31|114987|WD repeat domain 31	NM_145241|WDR31|114987|WD repeat domain 31
hg18_v1_chr22_-_16637221_16637225	0.00536826	SOX2.p2	BC009197|BID|637|BH3 interacting domain death agonist	AF087891|BID|637|BH3 interacting domain death agonist	AF042083|BID|637|BH3 interacting domain death agonist
hg18_v1_chr17_+_71772982_71773002	0.0053666	SOX2.p2	CR616618|FAM100B|283991|family with sequence similarity 100, member B
hg18_v1_chr3_-_107070400_107070595	0.00536439	SOX2.p2	AK094184|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b	AK292792|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b	BC032851|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b	NM_170662|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b	U26710|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b	U26711|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b	U26712|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b
hg18_v1_chr19_+_15058790_15058876	0.00534924	SOX2.p2	BC140930|OR1I1|126370|olfactory receptor, family 1, subfamily I, member 1	NM_001004713|OR1I1|126370|olfactory receptor, family 1, subfamily I, member 1
hg18_v1_chr6_-_33864883_33864894	0.00526543	SOX2.p2	BC039864|LEMD2|221496|LEM domain containing 2	NM_181336|LEMD2|221496|LEM domain containing 2
hg18_v1_chr19_+_46462176_46462187	0.00523533	SOX2.p2	BC002564|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1
hg18_v1_chr16_+_66836707_66836796	0.00522542	SOX2.p2	AK300596|PLA2G15|23659|phospholipase A2, group XV	AK074828|PLA2G15|23659|phospholipase A2, group XV	NM_012320|PLA2G15|23659|phospholipase A2, group XV	AK296263|PLA2G15|23659|phospholipase A2, group XV	AK298494|PLA2G15|23659|phospholipase A2, group XV	AL110209|PLA2G15|23659|phospholipase A2, group XV	CR598578|PLA2G15|23659|phospholipase A2, group XV	BC062605|PLA2G15|23659|phospholipase A2, group XV	AK001705|PLA2G15|23659|phospholipase A2, group XV	AK222790|PLA2G15|23659|phospholipase A2, group XV
hg18_v1_chr7_+_73709974_73709987	0.00518966	SOX2.p2	BC070484|GTF2I|2969|general transcription factor IIi
hg18_v1_chr2_-_47257117_47257144	0.00518747	SOX2.p2	CR590655|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	CR601833|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	CR605532|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	CR606009|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	CR618742|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	CR624584|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	CR625162|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	M19311|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	CR591343|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	CR593656|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	CR594016|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	CR597132|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	CR617592|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	BC003354|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	CR605016|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	CR605025|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	CR605655|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	CR605737|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	CR607372|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	BC006464|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	CR617995|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	CR606757|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	CR615210|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)
hg18_v1_chr15_+_43667050_43667080	0.0051533	SOX2.p2	AK128626|PLDN|26258|pallidin homolog (mouse)
hg18_v1_chr8_+_19840861_19841003	0.0051211	SOX2.p2	NM_000237|LPL|4023|lipoprotein lipase
hg18_v1_chr21_-_30791298_30791342	0.00510074	SOX2.p2	NM_181610|KRTAP19-4|337971|keratin associated protein 19-4	AB096945|KRTAP19-4|337971|keratin associated protein 19-4	BC117197|KRTAP19-4|337971|keratin associated protein 19-4	BC117199|KRTAP19-4|337971|keratin associated protein 19-4
hg18_v1_chr17_+_77261447_77261453	0.00507604	SOX2.p2	AK303800|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate
hg18_v1_chr20_+_61622985_61623074	0.00502409	SOX2.p2	CR608021|PPDPF|79144|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)
hg18_v1_chr7_+_71937980_71938091	0.00499725	SOX2.p2	CR607512|SBDSP1|155370|Shwachman-Bodian-Diamond syndrome pseudogene 1	CR607679|SBDSP1|155370|Shwachman-Bodian-Diamond syndrome pseudogene 1	CR599716|SBDSP1|155370|Shwachman-Bodian-Diamond syndrome pseudogene 1	BC010183|SBDSP1|155370|Shwachman-Bodian-Diamond syndrome pseudogene 1	CR610804|SBDSP1|155370|Shwachman-Bodian-Diamond syndrome pseudogene 1
hg18_v1_chr1_+_93686154_93686466	0.00498969	SOX2.p2	NM_001024948|FNBP1L|54874|formin binding protein 1-like	NM_001164473|FNBP1L|54874|formin binding protein 1-like	NM_017737|FNBP1L|54874|formin binding protein 1-like	AY514449|FNBP1L|54874|formin binding protein 1-like
hg18_v1_chr11_-_58099884_58099965	0.00498299	SOX2.p2	BC007490|LPXN|9404|leupaxin	BC019035|LPXN|9404|leupaxin	CR591836|LPXN|9404|leupaxin	CR612739|LPXN|9404|leupaxin	AK313306|LPXN|9404|leupaxin	AK223165|LPXN|9404|leupaxin	AK301093|LPXN|9404|leupaxin	AF062075|LPXN|9404|leupaxin	NM_004811|LPXN|9404|leupaxin
hg18_v1_chr6_-_43089528_43089605	0.0049761	SOX2.p2	BT009831|MEA1|4201|male-enhanced antigen 1	L10400|MEA1|4201|male-enhanced antigen 1	M27937|MEA1|4201|male-enhanced antigen 1	BC001754|MEA1|4201|male-enhanced antigen 1	NM_014623|MEA1|4201|male-enhanced antigen 1
hg18_v1_chr10_-_64248932_64248932	0.00497529	SOX2.p2	AK312813|EGR2|1959|early growth response 2	NM_001136178|EGR2|1959|early growth response 2
hg18_v1_chr3_+_187840842_187841077	0.00496481	SOX2.p2	AF534529|FETUB|26998|fetuin B	AJ242928|FETUB|26998|fetuin B	NM_014375|FETUB|26998|fetuin B	AB017551|FETUB|26998|fetuin B	BC069670|FETUB|26998|fetuin B	BC069820|FETUB|26998|fetuin B	BC114616|FETUB|26998|fetuin B	CR603548|FETUB|26998|fetuin B	BC074734|FETUB|26998|fetuin B	AY373820|FETUB|26998|fetuin B	AY373821|FETUB|26998|fetuin B	AK309647|FETUB|26998|fetuin B
hg18_v1_chr7_-_50103335_50103405	0.00495764	SOX2.p2	BT006822|ZPBP|11055|zona pellucida binding protein	DQ890629|ZPBP|11055|zona pellucida binding protein	DQ893797|ZPBP|11055|zona pellucida binding protein	BC005223|ZPBP|11055|zona pellucida binding protein	D17570|ZPBP|11055|zona pellucida binding protein	AK312799|ZPBP|11055|zona pellucida binding protein	NM_001159878|ZPBP|11055|zona pellucida binding protein	NM_007009|ZPBP|11055|zona pellucida binding protein
hg18_v1_chr10_+_6284845_6284919	0.00491987	SOX2.p2	NM_004566|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3	L77662|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3	AK291263|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3	BC040482|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3	AF056320|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
hg18_v1_chr7_+_105390892_105390977	0.00490361	SOX2.p2	NM_152750|CDHR3|222256|cadherin-related family member 3	AK126338|CDHR3|222256|cadherin-related family member 3	AK131293|CDHR3|222256|cadherin-related family member 3	AK304118|CDHR3|222256|cadherin-related family member 3	BC111696|CDHR3|222256|cadherin-related family member 3	BC111738|CDHR3|222256|cadherin-related family member 3	AK304352|CDHR3|222256|cadherin-related family member 3
hg18_v1_chr12_+_67489063_67489073	0.004898	SOX2.p2	EU076746|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)	EU076747|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)	EU076748|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)	EU076749|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)
hg18_v1_chr17_-_77094426_77094495	0.00488166	SOX2.p2	CR595732|ACTG1|71|actin, gamma 1
hg18_v1_chr1_+_61315378_61315510	0.00484363	SOX2.p2	
hg18_v1_chr20_+_47269371_47269384	0.00482435	SOX2.p2	BC009304|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27	BC011927|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27	BC016060|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27
hg18_v1_chr1_-_144322295_144322385	0.00481385	SOX2.p2	CR605615|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)
hg18_v1_chr1_+_10412745_10412745	0.00481302	SOX2.p2	AF521016|APITD1-CORT|100526739|APITD1-CORT readthrough	NM_198544|APITD1-CORT|100526739|APITD1-CORT readthrough	NM_199006|APITD1-CORT|100526739|APITD1-CORT readthrough	NM_199294|APITD1|378708|apoptosis-inducing, TAF9-like domain 1
hg18_v1_chr17_+_40141586_40141591	0.0048101	SOX2.p2	BC033660|DBF4B|80174|DBF4 homolog B (S. cerevisiae)
hg18_v1_chr15_+_43666708_43666848	0.00479598	SOX2.p2	AF080470|PLDN|26258|pallidin homolog (mouse)	NM_012388|PLDN|26258|pallidin homolog (mouse)
hg18_v1_chr6_-_100123124_100123232	0.00477852	SOX2.p2	AB125137|CCNC|892|cyclin C	BC050726|CCNC|892|cyclin C	AK223247|CCNC|892|cyclin C	M74091|CCNC|892|cyclin C	AK291914|CCNC|892|cyclin C	AK222768|CCNC|892|cyclin C	BC026272|CCNC|892|cyclin C	BC030159|CCNC|892|cyclin C	BC056153|CCNC|892|cyclin C
hg18_v1_chr22_-_16637194_16637220	0.00476291	SOX2.p2	AK313729|BID|637|BH3 interacting domain death agonist	BC033634|BID|637|BH3 interacting domain death agonist
hg18_v1_chr1_-_29348252_29348308	0.00475711	SOX2.p2	CR594929|SRSF4|6429|serine/arginine-rich splicing factor 4
hg18_v1_chr1_-_91259601_91259625	0.00475312	SOX2.p2	BC050656|ZNF644|84146|zinc finger protein 644	AK024026|ZNF644|84146|zinc finger protein 644	NM_016620|ZNF644|84146|zinc finger protein 644
hg18_v1_chr1_+_44451698_44451762	0.00472715	SOX2.p2	NM_001034023|DMAP1|55929|DNA methyltransferase 1 associated protein 1	NM_001034024|DMAP1|55929|DNA methyltransferase 1 associated protein 1	NM_019100|DMAP1|55929|DNA methyltransferase 1 associated protein 1	AL136657|DMAP1|55929|DNA methyltransferase 1 associated protein 1	AK300372|DMAP1|55929|DNA methyltransferase 1 associated protein 1	BC002855|DMAP1|55929|DNA methyltransferase 1 associated protein 1	AK300442|DMAP1|55929|DNA methyltransferase 1 associated protein 1	AK293598|DMAP1|55929|DNA methyltransferase 1 associated protein 1	AK021605|DMAP1|55929|DNA methyltransferase 1 associated protein 1	AK289366|DMAP1|55929|DNA methyltransferase 1 associated protein 1	AK298793|DMAP1|55929|DNA methyltransferase 1 associated protein 1	AB037846|DMAP1|55929|DNA methyltransferase 1 associated protein 1	AL137200|DMAP1|55929|DNA methyltransferase 1 associated protein 1	BC008053|DMAP1|55929|DNA methyltransferase 1 associated protein 1	AK300217|DMAP1|55929|DNA methyltransferase 1 associated protein 1
hg18_v1_chr10_+_80740584_80740716	0.00471896	SOX2.p2	BC025342|ZMIZ1|57178|zinc finger, MIZ-type containing 1	BC068072|ZMIZ1|57178|zinc finger, MIZ-type containing 1
hg18_v1_chr8_+_23442331_23442388	0.00469447	SOX2.p2	BC132799|SLC25A37|51312|solute carrier family 25, member 37	BC132801|SLC25A37|51312|solute carrier family 25, member 37
hg18_v1_chr5_-_177986678_177986694	0.00468492	SOX2.p2	AK308879|CLK4|57396|CDC-like kinase 4	BC151233|CLK4|57396|CDC-like kinase 4
hg18_v1_chr10_-_91092410_91092461	0.00467173	SOX2.p2	AK091558|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase
hg18_v1_chr19_-_58157832_58157935	0.00465757	SOX2.p2	BC105739|ZNF816|125893|zinc finger protein 816	BC105740|ZNF816|125893|zinc finger protein 816	BC105930|ZNF816|125893|zinc finger protein 816	AK316503|ZNF816-ZNF321|100529240|ZNF816-ZNF321 readthrough	AK291990|ZNF816|125893|zinc finger protein 816	BC063805|ZNF816|125893|zinc finger protein 816	NM_001031665|ZNF816|125893|zinc finger protein 816	CR749224|ZNF816-ZNF321|100529240|ZNF816-ZNF321 readthrough
hg18_v1_chr5_+_137716169_137716190	0.00464328	SOX2.p2	AF338242|KDM3B|51780|lysine (K)-specific demethylase 3B	NM_016604|KDM3B|51780|lysine (K)-specific demethylase 3B
hg18_v1_chr22_+_18485068_18485075	0.00463093	SOX2.p2	X83617|RANBP1|5902|RAN binding protein 1
hg18_v1_chr6_-_16869579_16869773	0.00463049	SOX2.p2	BC039236|ATXN1|6310|ataxin 1	BC014548|ATXN1|6310|ataxin 1	X79204|ATXN1|6310|ataxin 1	AK311274|ATXN1|6310|ataxin 1	BC063120|ATXN1|6310|ataxin 1	BC047894|ATXN1|6310|ataxin 1	NM_000332|ATXN1|6310|ataxin 1	NM_001128164|ATXN1|6310|ataxin 1	BC011026|ATXN1|6310|ataxin 1
hg18_v1_chr6_-_47385313_47385382	0.00462564	SOX2.p2	AB209394|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg18_v1_chrX_-_100193500_100193575	0.00460247	SOX2.p2	CR605503|TRMT2B|79979|TRM2 tRNA methyltransferase 2 homolog B (S. cerevisiae)	AK315780|TRMT2B|79979|TRM2 tRNA methyltransferase 2 homolog B (S. cerevisiae)	AK022749|TRMT2B|79979|TRM2 tRNA methyltransferase 2 homolog B (S. cerevisiae)
hg18_v1_chr2_-_171998681_171998864	0.00456073	SOX2.p2	AK124092|METTL8|79828|methyltransferase like 8	BC025250|METTL8|79828|methyltransferase like 8	CR612022|METTL8|79828|methyltransferase like 8	AK024046|METTL8|79828|methyltransferase like 8
hg18_v1_chr8_-_71146103_71146115	0.00454783	SOX2.p2	AF319458|PRDM14|63978|PR domain containing 14	AK022595|PRDM14|63978|PR domain containing 14	NM_024504|PRDM14|63978|PR domain containing 14
hg18_v1_chr19_+_46507872_46507976	0.00454552	SOX2.p2	BC011577|CCDC97|90324|coiled-coil domain containing 97	NM_052848|CCDC97|90324|coiled-coil domain containing 97
hg18_v1_chr1_+_61315516_61315533	0.00451163	SOX2.p2	AK299289|NFIA|4774|nuclear factor I/A	NM_001145511|NFIA|4774|nuclear factor I/A
hg18_v1_chr1_+_86943074_86943100	0.00447921	SOX2.p2	AF350371|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1
hg18_v1_chr19_+_40831073_40831112	0.00446246	SOX2.p2	CR600969|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)	D28426|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)	BC002478|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)	X54473|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)	X13923|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)
hg18_v1_chr9_-_94127440_94127453	0.00446197	SOX2.p2	CR627363|NOL8|55035|nucleolar protein 8	BC008491|NOL8|55035|nucleolar protein 8	AK001049|NOL8|55035|nucleolar protein 8	AK307408|NOL8|55035|nucleolar protein 8	BC146810|NOL8|55035|nucleolar protein 8	AK297355|NOL8|55035|nucleolar protein 8
hg18_v1_chr4_-_149582948_149583121	0.00444972	SOX2.p2	AJ315514|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2	M16801|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2	AK304318|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2	NM_000901|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2	NM_001166104|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2
hg18_v1_chr6_-_47385470_47385598	0.00444914	SOX2.p2	BC021572|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21	AY358304|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg18_v1_chr9_-_138454095_138454169	0.00442208	SOX2.p2	BC110356|INPP5E|56623|inositol polyphosphate-5-phosphatase, 72 kDa
hg18_v1_chr4_-_1655515_1655785	0.00440605	SOX2.p2	BC070112|FAM53A|152877|family with sequence similarity 53, member A	NM_001013622|FAM53A|152877|family with sequence similarity 53, member A	BC042071|FAM53A|152877|family with sequence similarity 53, member A	AK125566|FAM53A|152877|family with sequence similarity 53, member A	NM_001174070|FAM53A|152877|family with sequence similarity 53, member A
hg18_v1_chr4_-_57242492_57242628	0.00435012	SOX2.p2	CR611831|HOPX|84525|HOP homeobox	AF492675|HOPX|84525|HOP homeobox	NM_001145460|HOPX|84525|HOP homeobox	NM_032495|HOPX|84525|HOP homeobox	NM_139212|HOPX|84525|HOP homeobox
hg18_v1_chr1_+_154449389_154449448	0.00434298	SOX2.p2	AK124646|PMF1|11243|polyamine-modulated factor 1	NM_007221|PMF1|11243|polyamine-modulated factor 1	AK307287|PMF1|11243|polyamine-modulated factor 1	AK022523|PMF1|11243|polyamine-modulated factor 1	AK289490|PMF1|11243|polyamine-modulated factor 1	AK290260|PMF1|11243|polyamine-modulated factor 1	AK310694|PMF1|11243|polyamine-modulated factor 1	BC033656|PMF1-BGLAP|100527963|PMF1-BGLAP read-through transcript	BC065031|PMF1|11243|polyamine-modulated factor 1	DQ890582|PMF1-BGLAP|100527963|PMF1-BGLAP read-through transcript	DQ893741|PMF1-BGLAP|100527963|PMF1-BGLAP read-through transcript	EU832507|PMF1|11243|polyamine-modulated factor 1	EU832588|PMF1|11243|polyamine-modulated factor 1	AL080101|PMF1|11243|polyamine-modulated factor 1	BC056417|PMF1|11243|polyamine-modulated factor 1	AF141310|PMF1|11243|polyamine-modulated factor 1	CR616631|PMF1|11243|polyamine-modulated factor 1	BC050735|PMF1|11243|polyamine-modulated factor 1
hg18_v1_chr4_+_74493331_74493360	0.0043331	SOX2.p2	CR623499|ALB|213|albumin	CR594507|ALB|213|albumin
hg18_v1_chr2_+_86801081_86801300	0.00431888	SOX2.p2	BC012165|RMND5A|64795|required for meiotic nuclear division 5 homolog A (S. cerevisiae)	EU831470|RMND5A|64795|required for meiotic nuclear division 5 homolog A (S. cerevisiae)	EU831557|RMND5A|64795|required for meiotic nuclear division 5 homolog A (S. cerevisiae)
hg18_v1_chr7_+_37746520_37746520	0.00430707	SOX2.p2	AY288420|GPR141|353345|G protein-coupled receptor 141	BC120951|GPR141|353345|G protein-coupled receptor 141	BC120952|GPR141|353345|G protein-coupled receptor 141	NM_181791|GPR141|353345|G protein-coupled receptor 141
hg18_v1_chr10_+_93548048_93548118	0.00430621	SOX2.p2	AF438201|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2
hg18_v1_chr19_-_12853140_12853234	0.00428304	SOX2.p2	FJ752529|DNASE2|1777|deoxyribonuclease II, lysosomal	BT007047|DNASE2|1777|deoxyribonuclease II, lysosomal	BC010419|DNASE2|1777|deoxyribonuclease II, lysosomal	CR616269|DNASE2|1777|deoxyribonuclease II, lysosomal	CR612006|DNASE2|1777|deoxyribonuclease II, lysosomal
hg18_v1_chr5_+_173247919_173248049	0.00425323	SOX2.p2	NM_030627|CPEB4|80315|cytoplasmic polyadenylation element binding protein 4
hg18_v1_chr1_+_171950684_171950754	0.0042472	SOX2.p2	NM_014458|KLHL20|27252|kelch-like 20 (Drosophila)	AK308048|KLHL20|27252|kelch-like 20 (Drosophila)	AK300755|KLHL20|27252|kelch-like 20 (Drosophila)	AK001430|KLHL20|27252|kelch-like 20 (Drosophila)
hg18_v1_chr1_-_1157216_1157219	0.00423479	SOX2.p2	CR625758|SDF4|51150|stromal cell derived factor 4
hg18_v1_chr16_-_52295214_52295303	0.00421741	SOX2.p2	BC136433|RPGRIP1L|23322|RPGRIP1-like	AK096333|RPGRIP1L|23322|RPGRIP1-like	AK308390|RPGRIP1L|23322|RPGRIP1-like	BC017977|RPGRIP1L|23322|RPGRIP1-like	CR749645|RPGRIP1L|23322|RPGRIP1-like	AK307929|RPGRIP1L|23322|RPGRIP1-like	EF565106|RPGRIP1L|23322|RPGRIP1-like	NM_001127897|RPGRIP1L|23322|RPGRIP1-like	NM_015272|RPGRIP1L|23322|RPGRIP1-like	AK304790|RPGRIP1L|23322|RPGRIP1-like
hg18_v1_chr16_-_57221235_57221239	0.00417923	SOX2.p2	AK300281|CNOT1|23019|CCR4-NOT transcription complex, subunit 1	AK056927|CNOT1|23019|CCR4-NOT transcription complex, subunit 1	BX537840|CNOT1|23019|CCR4-NOT transcription complex, subunit 1	EF553522|CNOT1|23019|CCR4-NOT transcription complex, subunit 1	AL832769|CNOT1|23019|CCR4-NOT transcription complex, subunit 1
hg18_v1_chr7_+_56086871_56086929	0.00416263	SOX2.p2	NM_001009186|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	NM_001762|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	AB063318|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)
hg18_v1_chr10_-_61335967_61336090	0.00413428	SOX2.p2	
hg18_v1_chr5_+_140751666_140751666	0.0041301	SOX2.p2	NM_014004|PCDHGA8|9708|protocadherin gamma subfamily A, 8	NM_032088|PCDHGA8|9708|protocadherin gamma subfamily A, 8
hg18_v1_chr4_-_44423275_44423368	0.00406291	SOX2.p2	AK296051|GNPDA2|132789|glucosamine-6-phosphate deaminase 2	AB209904|GNPDA2|132789|glucosamine-6-phosphate deaminase 2	AK055639|GNPDA2|132789|glucosamine-6-phosphate deaminase 2	AY173948|GNPDA2|132789|glucosamine-6-phosphate deaminase 2	AK129655|GNPDA2|132789|glucosamine-6-phosphate deaminase 2	AF247786|GNPDA2|132789|glucosamine-6-phosphate deaminase 2	NM_138335|GNPDA2|132789|glucosamine-6-phosphate deaminase 2
hg18_v1_chr5_-_132326872_132326960	0.00404988	SOX2.p2	AF213987|AFF4|27125|AF4/FMR2 family, member 4
hg18_v1_chr19_+_57492236_57492262	0.004044	SOX2.p2	BC007056|ZNF480|147657|zinc finger protein 480	BC054018|ZNF480|147657|zinc finger protein 480	NM_144684|ZNF480|147657|zinc finger protein 480	AK096559|ZNF480|147657|zinc finger protein 480	AK096442|ZNF480|147657|zinc finger protein 480	AK303271|ZNF480|147657|zinc finger protein 480	AL832560|ZNF480|147657|zinc finger protein 480	BC065503|ZNF480|147657|zinc finger protein 480	AY512662|ZNF480|147657|zinc finger protein 480	BC018783|ZNF480|147657|zinc finger protein 480
hg18_v1_chrX_-_100999204_100999204	0.00402717	SOX2.p2	AJ277654|NXF5|55998|nuclear RNA export factor 5	AJ277655|NXF5|55998|nuclear RNA export factor 5	AJ277656|NXF5|55998|nuclear RNA export factor 5	AJ277657|NXF5|55998|nuclear RNA export factor 5	AJ277658|NXF5|55998|nuclear RNA export factor 5	NM_032946|NXF5|55998|nuclear RNA export factor 5
hg18_v1_chr10_-_76488277_76488346	0.00402189	SOX2.p2	AY686755|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1	NM_001003892|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1	BC137321|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1	BC137322|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1
hg18_v1_chr11_+_119701047_119701047	0.00400493	SOX2.p2	AK128040|TMEM136|219902|transmembrane protein 136	NM_001198670|TMEM136|219902|transmembrane protein 136	NM_001198671|TMEM136|219902|transmembrane protein 136	NM_001198672|TMEM136|219902|transmembrane protein 136	NM_001198673|TMEM136|219902|transmembrane protein 136	NM_001198674|TMEM136|219902|transmembrane protein 136	NM_001198675|TMEM136|219902|transmembrane protein 136	NM_174926|TMEM136|219902|transmembrane protein 136
hg18_v1_chr2_+_61146866_61146866	0.00398472	SOX2.p2	BC070104|KIAA1841|84542|KIAA1841	NM_032506|KIAA1841|84542|KIAA1841
hg18_v1_chr6_-_30136734_30136950	0.00398349	SOX2.p2	AF032109|ZNRD1-AS1|80862|ZNRD1 antisense RNA 1 (non-protein coding)	CR611202|ZNRD1-AS1|80862|ZNRD1 antisense RNA 1 (non-protein coding)	AK126001|ZNRD1-AS1|80862|ZNRD1 antisense RNA 1 (non-protein coding)	BX648746|ZNRD1-AS1|80862|ZNRD1 antisense RNA 1 (non-protein coding)	AF032110|ZNRD1-AS1|80862|ZNRD1 antisense RNA 1 (non-protein coding)
hg18_v1_chr2_-_108517028_108517127	0.00397351	SOX2.p2	BC004487|FLJ38668|644903|hypothetical LOC644903	AK095987|FLJ38668|644903|hypothetical LOC644903
hg18_v1_chr2_-_100088224_100088476	0.00397343	SOX2.p2	NM_001025108|AFF3|3899|AF4/FMR2 family, member 3
hg18_v1_chr8_+_133856793_133856855	0.0039597	SOX2.p2	AK290506|PHF20L1|51105|PHD finger protein 20-like 1	CR623764|PHF20L1|51105|PHD finger protein 20-like 1	BC002822|PHF20L1|51105|PHD finger protein 20-like 1	BC015211|PHF20L1|51105|PHD finger protein 20-like 1
hg18_v1_chr17_-_76827479_76827489	0.00394092	SOX2.p2	NM_144679|C17orf56|146705|chromosome 17 open reading frame 56
hg18_v1_chr11_-_107234733_107234863	0.00393547	SOX2.p2	AK300582|SLC35F2|54733|solute carrier family 35, member F2	BC039195|SLC35F2|54733|solute carrier family 35, member F2
hg18_v1_chr3_-_157755603_157755671	0.00393074	SOX2.p2	CR597465|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)	AF087907|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)	AF110647|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)	BC017203|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)	NM_007107|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)
hg18_v1_chr2_+_102744921_102744973	0.00393023	SOX2.p2	CR936735|TMEM182|130827|transmembrane protein 182	NM_144632|TMEM182|130827|transmembrane protein 182	CR936731|TMEM182|130827|transmembrane protein 182	CR936732|TMEM182|130827|transmembrane protein 182	AK129862|TMEM182|130827|transmembrane protein 182	BC130306|TMEM182|130827|transmembrane protein 182	BC130308|TMEM182|130827|transmembrane protein 182
hg18_v1_chr10_+_93548162_93548177	0.00387202	SOX2.p2	AK314612|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2	AF309033|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2
hg18_v1_chr2_-_64224948_64225108	0.00386914	SOX2.p2	BC063611|PELI1|57162|pellino homolog 1 (Drosophila)	BC050533|PELI1|57162|pellino homolog 1 (Drosophila)	AK312441|PELI1|57162|pellino homolog 1 (Drosophila)	BC050019|PELI1|57162|pellino homolog 1 (Drosophila)	NM_020651|PELI1|57162|pellino homolog 1 (Drosophila)
hg18_v1_chrX_+_71318250_71318351	0.00384386	SOX2.p2	NM_001170747|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	NM_006223|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	BC093700|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	BC112281|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	AB009690|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	BC005234|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	BC070288|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	BC111394|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	BC104653|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	AK127605|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	AF143096|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)
hg18_v1_chr3_-_185085384_185085420	0.00383892	SOX2.p2	NM_001037639|PARL|55486|presenilin associated, rhomboid-like	NM_018622|PARL|55486|presenilin associated, rhomboid-like
hg18_v1_chr17_+_38916758_38916888	0.00380386	SOX2.p2	AK294046|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8	BC020697|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8	AK303319|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8	D50487|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8	NM_004941|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8	AK291664|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8
hg18_v1_chr19_-_48815853_48815853	0.00379948	SOX2.p2	NM_182498|ZNF428|126299|zinc finger protein 428
hg18_v1_chr20_+_34667590_34667596	0.00379606	SOX2.p2	CR624571|C20orf24|55969|chromosome 20 open reading frame 24
hg18_v1_chr2_-_170389598_170389665	0.00378708	SOX2.p2	BC000921|METTL5|29081|methyltransferase like 5	NM_014168|METTL5|29081|methyltransferase like 5	CR616340|METTL5|29081|methyltransferase like 5	AF201938|METTL5|29081|methyltransferase like 5	AF161482|METTL5|29081|methyltransferase like 5	AK001321|METTL5|29081|methyltransferase like 5	BC093014|METTL5|29081|methyltransferase like 5
hg18_v1_chr12_-_119391897_119391910	0.00373274	SOX2.p2	AK294254|SRSF9|8683|serine/arginine-rich splicing factor 9
hg18_v1_chr10_+_96688399_96688466	0.00368256	SOX2.p2	AK289420|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	AK298458|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	BC020754|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	NM_000771|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	BC070317|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	M61855|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	M61857|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	BC125054|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	D00173|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	M21939|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	M15331|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	S46963|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9
hg18_v1_chr1_-_52116965_52116988	0.00368087	SOX2.p2	U64898|NRD1|4898|nardilysin (N-arginine dibasic convertase)	BC008775|NRD1|4898|nardilysin (N-arginine dibasic convertase)
hg18_v1_chr8_-_72918938_72919048	0.0036742	SOX2.p2	AF087036|MSC|9242|musculin	BT007169|MSC|9242|musculin
hg18_v1_chr9_+_124742932_124743167	0.00365884	SOX2.p2	AK131449|RABGAP1|23637|RAB GTPase activating protein 1	BC020609|RABGAP1|23637|RAB GTPase activating protein 1	NM_012197|RABGAP1|23637|RAB GTPase activating protein 1	AK022408|RABGAP1|23637|RAB GTPase activating protein 1	BC054492|RABGAP1|23637|RAB GTPase activating protein 1	AF161357|RABGAP1|23637|RAB GTPase activating protein 1	AJ011679|RABGAP1|23637|RAB GTPase activating protein 1
hg18_v1_chr8_+_19841010_19841088	0.00359213	SOX2.p2	AK092286|LPL|4023|lipoprotein lipase	AK290290|LPL|4023|lipoprotein lipase	AK222464|LPL|4023|lipoprotein lipase	AK312311|LPL|4023|lipoprotein lipase	M15856|LPL|4023|lipoprotein lipase	X54516|LPL|4023|lipoprotein lipase
hg18_v1_chr8_+_19841209_19841231	0.00356602	SOX2.p2	BT006726|LPL|4023|lipoprotein lipase	CR457054|LPL|4023|lipoprotein lipase	DQ893541|LPL|4023|lipoprotein lipase	DQ893751|LPL|4023|lipoprotein lipase
hg18_v1_chr1_-_181826086_181826277	0.00353971	SOX2.p2	BT007439|NCF2|4688|neutrophil cytosolic factor 2	DQ893650|NCF2|4688|neutrophil cytosolic factor 2	DQ895812|NCF2|4688|neutrophil cytosolic factor 2	AF527950|NCF2|4688|neutrophil cytosolic factor 2	CR593013|NCF2|4688|neutrophil cytosolic factor 2	AK296672|NCF2|4688|neutrophil cytosolic factor 2	AK312666|NCF2|4688|neutrophil cytosolic factor 2	AK298713|NCF2|4688|neutrophil cytosolic factor 2
hg18_v1_chr1_+_117404432_117404462	0.00350822	SOX2.p2	AK291017|TTF2|8458|transcription termination factor, RNA polymerase II
hg18_v1_chr2_+_86521781_86521781	0.00350625	SOX2.p2	NM_018433|KDM3A|55818|lysine (K)-specific demethylase 3A
hg18_v1_chr1_-_201097253_201097358	0.00348158	SOX2.p2	
hg18_v1_chr19_-_864224_864230	0.00345017	SOX2.p2	CR596729|C19orf22|91300|chromosome 19 open reading frame 22	NM_138774|C19orf22|91300|chromosome 19 open reading frame 22	CR614472|C19orf22|91300|chromosome 19 open reading frame 22
hg18_v1_chr2_+_9900933_9901121	0.003439	SOX2.p2	CR622846|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa	NM_005680|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa	BC018137|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa	AK309751|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa	AK308070|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa	AK315098|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa	AK295402|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa	AK026521|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa	CR606132|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa	DQ894659|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa
hg18_v1_chr1_-_154988084_154988085	0.00343823	SOX2.p2	CR593023|HDGF|3068|hepatoma-derived growth factor
hg18_v1_chr20_-_30259007_30259266	0.00343706	SOX2.p2	AK292450|PLAGL2|5326|pleiomorphic adenoma gene-like 2	D83784|PLAGL2|5326|pleiomorphic adenoma gene-like 2	AF006005|PLAGL2|5326|pleiomorphic adenoma gene-like 2	BC023655|PLAGL2|5326|pleiomorphic adenoma gene-like 2	NM_002657|PLAGL2|5326|pleiomorphic adenoma gene-like 2
hg18_v1_chr17_-_71580117_71580170	0.00338276	SOX2.p2	AL512708|SRP68|6730|signal recognition particle 68kDa	AF195951|SRP68|6730|signal recognition particle 68kDa
hg18_v1_chr16_+_30326864_30326977	0.0033457	SOX2.p2	AF242768|ZNF771|51333|zinc finger protein 771
hg18_v1_chr21_+_29322100_29322128	0.00332173	SOX2.p2	DQ892395|USP16|10600|ubiquitin specific peptidase 16	DQ895610|USP16|10600|ubiquitin specific peptidase 16
hg18_v1_chr16_+_30326386_30326699	0.00330131	SOX2.p2	BC026192|ZNF771|51333|zinc finger protein 771	BC011870|ZNF771|51333|zinc finger protein 771
hg18_v1_chr22_+_42908612_42908689	0.00327888	SOX2.p2	CR619524|PARVG|64098|parvin, gamma
hg18_v1_chr6_-_89730066_89730066	0.00326528	SOX2.p2	NM_003800|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase
hg18_v1_chr12_-_6642513_6642621	0.0032484	SOX2.p2	BC013038|ING4|51147|inhibitor of growth family, member 4	CR614525|ING4|51147|inhibitor of growth family, member 4	AB197695|ING4|51147|inhibitor of growth family, member 4	AB197696|ING4|51147|inhibitor of growth family, member 4	AB197697|ING4|51147|inhibitor of growth family, member 4	EF152349|ING4|51147|inhibitor of growth family, member 4	EF152350|ING4|51147|inhibitor of growth family, member 4	EF152351|ING4|51147|inhibitor of growth family, member 4	EF152352|ING4|51147|inhibitor of growth family, member 4	BC007781|ING4|51147|inhibitor of growth family, member 4	BC095434|ING4|51147|inhibitor of growth family, member 4	CR596785|ING4|51147|inhibitor of growth family, member 4	AK313621|ING4|51147|inhibitor of growth family, member 4	AF110645|ING4|51147|inhibitor of growth family, member 4	AF156552|ING4|51147|inhibitor of growth family, member 4	AF063594|ING4|51147|inhibitor of growth family, member 4	AK293169|ING4|51147|inhibitor of growth family, member 4	AK303354|ING4|51147|inhibitor of growth family, member 4	CR616048|ING4|51147|inhibitor of growth family, member 4	NM_001127582|ING4|51147|inhibitor of growth family, member 4	NM_001127583|ING4|51147|inhibitor of growth family, member 4	NM_001127584|ING4|51147|inhibitor of growth family, member 4	NM_001127585|ING4|51147|inhibitor of growth family, member 4	NM_001127586|ING4|51147|inhibitor of growth family, member 4	NM_016162|ING4|51147|inhibitor of growth family, member 4
hg18_v1_chr20_-_44468660_44468753	0.003234	SOX2.p2	AK299318|ELMO2|63916|engulfment and cell motility 2	AL833406|ELMO2|63916|engulfment and cell motility 2	BX648819|ELMO2|63916|engulfment and cell motility 2	NM_133171|ELMO2|63916|engulfment and cell motility 2	NM_182764|ELMO2|63916|engulfment and cell motility 2
hg18_v1_chr10_-_105100880_105100887	0.00321948	SOX2.p2	BC010235|PCGF6|84108|polycomb group ring finger 6	NM_001011663|PCGF6|84108|polycomb group ring finger 6	NM_032154|PCGF6|84108|polycomb group ring finger 6
hg18_v1_chr6_+_111386455_111386591	0.00319787	SOX2.p2	AF361492|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa	AF361496|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa	NM_138408|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa	BC104655|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa
hg18_v1_chr22_-_16637160_16637189	0.00319481	SOX2.p2	D89803|BID|637|BH3 interacting domain death agonist	AY005151|BID|637|BH3 interacting domain death agonist	EU678292|BID|637|BH3 interacting domain death agonist
hg18_v1_chr3_+_195888701_195888883	0.00316264	SOX2.p2	BC039689|FAM43A|131583|family with sequence similarity 43, member A	AK074503|FAM43A|131583|family with sequence similarity 43, member A	CR611019|FAM43A|131583|family with sequence similarity 43, member A
hg18_v1_chr16_+_49333461_49333510	0.00315741	SOX2.p2	NM_001042355|CYLD|1540|cylindromatosis (turban tumor syndrome)	NM_015247|CYLD|1540|cylindromatosis (turban tumor syndrome)	AK292975|CYLD|1540|cylindromatosis (turban tumor syndrome)	AK225202|CYLD|1540|cylindromatosis (turban tumor syndrome)	AJ250014|CYLD|1540|cylindromatosis (turban tumor syndrome)	AK310832|CYLD|1540|cylindromatosis (turban tumor syndrome)	AK056226|CYLD|1540|cylindromatosis (turban tumor syndrome)
hg18_v1_chr7_+_139124502_139124515	0.00315203	SOX2.p2	BC014117|TBXAS1|6916|thromboxane A synthase 1 (platelet)	NM_001130966|TBXAS1|6916|thromboxane A synthase 1 (platelet)	NM_001166254|TBXAS1|6916|thromboxane A synthase 1 (platelet)
hg18_v1_chr15_-_53822468_53822569	0.0031477	SOX2.p2	AY630258|PRTG|283659|protogenin	NM_173814|PRTG|283659|protogenin
hg18_v1_chr11_+_63510403_63510472	0.00312813	SOX2.p2	AK000120|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	CR610074|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	CR617727|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	CR603142|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	CR605354|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	CR620541|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1
hg18_v1_chr8_+_143542378_143542378	0.00312426	SOX2.p2	AB005297|BAI1|575|brain-specific angiogenesis inhibitor 1	NM_001702|BAI1|575|brain-specific angiogenesis inhibitor 1
hg18_v1_chr12_-_48705427_48705573	0.00308352	SOX2.p2	BC024144|RACGAP1|29127|Rac GTPase activating protein 1	AB030251|RACGAP1|29127|Rac GTPase activating protein 1	AK000733|RACGAP1|29127|Rac GTPase activating protein 1	AL136794|RACGAP1|29127|Rac GTPase activating protein 1	BC032754|RACGAP1|29127|Rac GTPase activating protein 1	AK315785|RACGAP1|29127|Rac GTPase activating protein 1	NM_001126103|RACGAP1|29127|Rac GTPase activating protein 1	NM_001126104|RACGAP1|29127|Rac GTPase activating protein 1	NM_013277|RACGAP1|29127|Rac GTPase activating protein 1
hg18_v1_chr22_+_18484810_18485027	0.00306889	SOX2.p2	D38076|RANBP1|5902|RAN binding protein 1	NM_002882|RANBP1|5902|RAN binding protein 1	AK223506|RANBP1|5902|RAN binding protein 1
hg18_v1_chr21_+_44856423_44856429	0.00306482	SOX2.p2	AB076355|KRTAP10-8|386681|keratin associated protein 10-8	NM_198695|KRTAP10-8|386681|keratin associated protein 10-8	BC127016|KRTAP10-8|386681|keratin associated protein 10-8
hg18_v1_chr7_+_23252915_23252924	0.00304979	SOX2.p2	AK292078|GPNMB|10457|glycoprotein (transmembrane) nmb	AK296779|GPNMB|10457|glycoprotein (transmembrane) nmb	AK297031|GPNMB|10457|glycoprotein (transmembrane) nmb	AK297803|GPNMB|10457|glycoprotein (transmembrane) nmb	AY359124|GPNMB|10457|glycoprotein (transmembrane) nmb	BC032783|GPNMB|10457|glycoprotein (transmembrane) nmb
hg18_v1_chr1_+_153374900_153374966	0.00303189	SOX2.p2	AK289551|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1	NM_001122837|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1	NM_001122839|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1	NM_018845|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1	AF126023|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1	BC009621|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1	AF126024|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1	BC012378|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1
hg18_v1_chr1_+_243199906_243200064	0.00303159	SOX2.p2	AK090927|EFCAB2|84288|EF-hand calcium binding domain 2
hg18_v1_chr22_+_36928972_36928972	0.00302403	SOX2.p2	NM_001161573|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)
hg18_v1_chr8_-_17624304_17624363	0.00301899	SOX2.p2	AK294860|MTUS1|57509|microtubule associated tumor suppressor 1	NM_001166393|MTUS1|57509|microtubule associated tumor suppressor 1
hg18_v1_chr20_-_23381478_23381481	0.00299759	SOX2.p2	BC121079|CST11|140880|cystatin 11	BC121080|CST11|140880|cystatin 11	AF335480|CST11|140880|cystatin 11	AF335481|CST11|140880|cystatin 11	NM_080830|CST11|140880|cystatin 11	NM_130794|CST11|140880|cystatin 11
hg18_v1_chr6_-_111242981_111243003	0.00297755	SOX2.p2	AJ420571|CDK19|23097|cyclin-dependent kinase 19
hg18_v1_chr11_+_4965996_4966015	0.00296866	SOX2.p2	BC101541|MMP26|56547|matrix metallopeptidase 26	BC101543|MMP26|56547|matrix metallopeptidase 26	AF291664|MMP26|56547|matrix metallopeptidase 26	NM_021801|MMP26|56547|matrix metallopeptidase 26	AJ251531|MMP26|56547|matrix metallopeptidase 26	AF230354|MMP26|56547|matrix metallopeptidase 26	AF248646|MMP26|56547|matrix metallopeptidase 26
hg18_v1_chr21_+_16024241_16024583	0.00296269	SOX2.p2	NM_013396|USP25|29761|ubiquitin specific peptidase 25	AF134213|USP25|29761|ubiquitin specific peptidase 25	BC015930|USP25|29761|ubiquitin specific peptidase 25	FJ763652|USP25|29761|ubiquitin specific peptidase 25
hg18_v1_chr3_+_184648089_184648153	0.00294928	SOX2.p2	CR603855|LOC100505687|100505687|hypothetical LOC100505687	AK057000|LOC100505687|100505687|hypothetical LOC100505687
hg18_v1_chr3_-_52248182_52248222	0.00291781	SOX2.p2	AL136773|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)	BC016452|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)	CR611569|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)	CR593060|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)	CR613911|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)	CR602270|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)	CR600187|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)	CR607625|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)	CR626408|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)	CR596947|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)	CR614000|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)	NM_007284|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)
hg18_v1_chr16_+_56054070_56054074	0.0028992	SOX2.p2	
hg18_v1_chr1_-_144322225_144322261	0.00289584	SOX2.p2	CR592330|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)	CR613712|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)	U93867|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)	BC002586|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)	NM_006468|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)
hg18_v1_chr17_-_77442658_77442751	0.00286639	SOX2.p2	AF047002|THOC4|10189|THO complex 4	EU831428|THOC4|10189|THO complex 4	EU831521|THOC4|10189|THO complex 4
hg18_v1_chr12_-_16321885_16321885	0.00285854	SOX2.p2	NM_001170798|SLC15A5|729025|solute carrier family 15, member 5
hg18_v1_chr14_-_21108714_21108714	0.00285044	SOX2.p2	NM_001005465|OR10G3|26533|olfactory receptor, family 10, subfamily G, member 3
hg18_v1_chr14_-_59020878_59020883	0.0028484	SOX2.p2	
hg18_v1_chr9_-_122877231_122877272	0.0028394	SOX2.p2	AB209031|C5|727|complement component 5
hg18_v1_chr11_-_74914066_74914246	0.00283062	SOX2.p2	BC090053|GDPD5|81544|glycerophosphodiester phosphodiesterase domain containing 5	AF318351|GDPD5|81544|glycerophosphodiester phosphodiesterase domain containing 5	NM_030792|GDPD5|81544|glycerophosphodiester phosphodiesterase domain containing 5
hg18_v1_chr1_+_22200735_22200753	0.00281863	SOX2.p2	BC005918|CELA3A|10136|chymotrypsin-like elastase family, member 3A	BC015103|CELA3A|10136|chymotrypsin-like elastase family, member 3A	D00306|CELA3A|10136|chymotrypsin-like elastase family, member 3A	NM_005747|CELA3A|10136|chymotrypsin-like elastase family, member 3A	BC007028|CELA3A|10136|chymotrypsin-like elastase family, member 3A	AK225620|CELA3A|10136|chymotrypsin-like elastase family, member 3A	AK308514|CELA3A|10136|chymotrypsin-like elastase family, member 3A	BC008383|CELA3A|10136|chymotrypsin-like elastase family, member 3A	DQ893182|CELA3A|10136|chymotrypsin-like elastase family, member 3A	DQ896490|CELA3A|10136|chymotrypsin-like elastase family, member 3A
hg18_v1_chr16_+_49333513_49333605	0.00281811	SOX2.p2	AF161542|CYLD|1540|cylindromatosis (turban tumor syndrome)	NM_001042412|CYLD|1540|cylindromatosis (turban tumor syndrome)	BC012342|CYLD|1540|cylindromatosis (turban tumor syndrome)
hg18_v1_chr20_+_34667566_34667589	0.00280828	SOX2.p2	NM_018840|C20orf24|55969|chromosome 20 open reading frame 24	NM_199483|C20orf24|55969|chromosome 20 open reading frame 24	AF112213|C20orf24|55969|chromosome 20 open reading frame 24
hg18_v1_chr2_-_98714020_98714070	0.00278763	SOX2.p2	CR610346|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A	NM_012214|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A
hg18_v1_chr9_-_127043436_127043453	0.0027847	SOX2.p2	AK293604|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)	X87949|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)
hg18_v1_chr2_-_85969527_85969667	0.00278399	SOX2.p2	AY359105|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	AF119415|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	AF344831|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	BC065936|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	AK001340|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	AB018356|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	NM_003896|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5
hg18_v1_chr9_-_138880530_138880589	0.00277456	SOX2.p2	BT009863|EDF1|8721|endothelial differentiation-related factor 1	CR541914|EDF1|8721|endothelial differentiation-related factor 1	DQ891577|EDF1|8721|endothelial differentiation-related factor 1	DQ894770|EDF1|8721|endothelial differentiation-related factor 1	AB002282|EDF1|8721|endothelial differentiation-related factor 1	AB002283|EDF1|8721|endothelial differentiation-related factor 1	BC015500|EDF1|8721|endothelial differentiation-related factor 1	NM_003792|EDF1|8721|endothelial differentiation-related factor 1	NM_153200|EDF1|8721|endothelial differentiation-related factor 1
hg18_v1_chr9_-_129752687_129752818	0.0027667	SOX2.p2	BC137087|FAM102A|399665|family with sequence similarity 102, member A	BC137088|FAM102A|399665|family with sequence similarity 102, member A	BC047949|FAM102A|399665|family with sequence similarity 102, member A	NM_203305|FAM102A|399665|family with sequence similarity 102, member A	BC142952|FAM102A|399665|family with sequence similarity 102, member A
hg18_v1_chr19_+_19872700_19872869	0.00275218	SOX2.p2	NM_031218|ZNF93|81931|zinc finger protein 93	BC020837|ZNF93|81931|zinc finger protein 93	BC070372|ZNF93|81931|zinc finger protein 93	BC107581|ZNF93|81931|zinc finger protein 93	AK096342|ZNF93|81931|zinc finger protein 93	BC058821|ZNF93|81931|zinc finger protein 93	BC038096|ZNF93|81931|zinc finger protein 93	BC136718|ZNF93|81931|zinc finger protein 93	BC136719|ZNF93|81931|zinc finger protein 93
hg18_v1_chr1_-_144322291_144322294	0.00273687	SOX2.p2	BC004424|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)
hg18_v1_chr7_+_16533029_16533029	0.00272697	SOX2.p2	NM_001195280|LOC100129335|100129335|leucine-rich repeat-containing protein ENSP00000371558
hg18_v1_chr1_-_153480980_153481276	0.00269533	SOX2.p2	AK311242|GBA|2629|glucosidase, beta, acid	CR616044|GBA|2629|glucosidase, beta, acid	CR609535|GBA|2629|glucosidase, beta, acid	AK312502|GBA|2629|glucosidase, beta, acid	BX648487|GBA|2629|glucosidase, beta, acid	AK300829|GBA|2629|glucosidase, beta, acid	AK291911|GBA|2629|glucosidase, beta, acid	AK300876|GBA|2629|glucosidase, beta, acid	NM_001005741|GBA|2629|glucosidase, beta, acid	NM_001005742|GBA|2629|glucosidase, beta, acid	NM_001171811|GBA|2629|glucosidase, beta, acid
hg18_v1_chr3_-_151746970_151747117	0.0026898	SOX2.p2	AK093929|SERP1|27230|stress-associated endoplasmic reticulum protein 1	AF136975|SERP1|27230|stress-associated endoplasmic reticulum protein 1	AK098135|SERP1|27230|stress-associated endoplasmic reticulum protein 1	AK090933|SERP1|27230|stress-associated endoplasmic reticulum protein 1	NM_014445|SERP1|27230|stress-associated endoplasmic reticulum protein 1
hg18_v1_chr7_+_99537065_99537424	0.00265761	SOX2.p2	NM_004722|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	AF020796|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	CR590642|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	CR611943|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	CR621800|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	Y08387|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	CR595500|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	BC018705|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	AF155158|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	AK304489|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	BC012023|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	AK315782|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	CR625474|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	AK296651|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	AK293590|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	BX640759|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit
hg18_v1_chr17_-_1534848_1534868	0.00263399	SOX2.p2	AB007510|PRPF8|10594|PRP8 pre-mRNA processing factor 8 homolog (S. cerevisiae)	AF092565|PRPF8|10594|PRP8 pre-mRNA processing factor 8 homolog (S. cerevisiae)
hg18_v1_chr16_-_18480763_18480950	0.0026269	SOX2.p2	X57398|NOMO1|23420|NODAL modulator 1	BC065535|NOMO1|23420|NODAL modulator 1	BC028389|NOMO2|283820|NODAL modulator 2	AK225803|NOMO2|283820|NODAL modulator 2	BC041131|NOMO2|283820|NODAL modulator 2	AL832855|NOMO2|283820|NODAL modulator 2	NM_001004060|NOMO2|283820|NODAL modulator 2	NM_173614|NOMO2|283820|NODAL modulator 2
hg18_v1_chr1_+_149299307_149299485	0.00262543	SOX2.p2	U16954|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	BC021703|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	BC032996|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	CR599332|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11
hg18_v1_chr12_+_67366989_67367072	0.00262378	SOX2.p2	AJ295745|NUP107|57122|nucleoporin 107kDa	NM_020401|NUP107|57122|nucleoporin 107kDa	AK055629|NUP107|57122|nucleoporin 107kDa	AK315157|NUP107|57122|nucleoporin 107kDa	AK094183|NUP107|57122|nucleoporin 107kDa	BC017167|NUP107|57122|nucleoporin 107kDa	BC043343|NUP107|57122|nucleoporin 107kDa
hg18_v1_chr8_+_64243741_64243767	0.00258996	SOX2.p2	AL831816|YTHDF3|253943|YTH domain family, member 3	AK056219|YTHDF3|253943|YTH domain family, member 3	BC037492|YTHDF3|253943|YTH domain family, member 3	AL832335|YTHDF3|253943|YTH domain family, member 3
hg18_v1_chr14_-_74669864_74669883	0.00258387	SOX2.p2	AK023615|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)
hg18_v1_chr8_+_145995038_145995215	0.00257116	SOX2.p2	AK131440|ZNF517|340385|zinc finger protein 517	NM_213605|ZNF517|340385|zinc finger protein 517	AK096527|ZNF517|340385|zinc finger protein 517	AK097278|ZNF517|340385|zinc finger protein 517
hg18_v1_chr6_+_31815703_31815845	0.00255194	SOX2.p2	NM_002441|MSH5|4439|mutS homolog 5 (E. coli)	NM_025259|MSH5|4439|mutS homolog 5 (E. coli)	NM_172165|MSH5|4439|mutS homolog 5 (E. coli)	NM_172166|MSH5|4439|mutS homolog 5 (E. coli)	AF070071|MSH5|4439|mutS homolog 5 (E. coli)	AK304221|MSH5|4439|mutS homolog 5 (E. coli)	AF034759|MSH5|4439|mutS homolog 5 (E. coli)	AJ245661|MSH5-C6ORF26|100532732|MSH5-C6orf26 read-through transcript	BC001358|MSH5|4439|mutS homolog 5 (E. coli)	BC002498|MSH5|4439|mutS homolog 5 (E. coli)	BC041031|MSH5|4439|mutS homolog 5 (E. coli)	AF048986|MSH5|4439|mutS homolog 5 (E. coli)
hg18_v1_chr16_+_55523526_55523759	0.00254017	SOX2.p2	AK302167|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	AB034989|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	AK223233|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	AK291565|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	AK292088|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	AK304800|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	BC009739|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	DQ837586|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	AF055001|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	D14695|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	BC000086|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	BC008320|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	CR625367|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	BC032673|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	DQ891867|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	EU176642|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	CR457116|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	AF055003|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1
hg18_v1_chr2_-_47257083_47257116	0.00253013	SOX2.p2	CR604986|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)
hg18_v1_chr7_-_8268292_8268341	0.00252628	SOX2.p2	U26592|ICA1|3382|islet cell autoantigen 1, 69kDa	AK292106|ICA1|3382|islet cell autoantigen 1, 69kDa	NM_001136020|ICA1|3382|islet cell autoantigen 1, 69kDa	CR605198|ICA1|3382|islet cell autoantigen 1, 69kDa	CR620744|ICA1|3382|islet cell autoantigen 1, 69kDa
hg18_v1_chr6_-_105414440_105414471	0.00252398	SOX2.p2	BC038119|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1	BC034982|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1
hg18_v1_chr11_+_44073674_44073827	0.0025174	SOX2.p2	NM_001178083|EXT2|2132|exostosin 2	NM_207122|EXT2|2132|exostosin 2	U62740|EXT2|2132|exostosin 2	AK312375|EXT2|2132|exostosin 2	BC010058|EXT2|2132|exostosin 2	AK296713|EXT2|2132|exostosin 2
hg18_v1_chr13_+_27092846_27093085	0.00251652	SOX2.p2	AK307356|POLR1D|51082|polymerase (RNA) I polypeptide D, 16kDa
hg18_v1_chr17_+_22982278_22982312	0.00249431	SOX2.p2	CR614567|LGALS9|3965|lectin, galactoside-binding, soluble, 9	NM_002308|LGALS9|3965|lectin, galactoside-binding, soluble, 9	NM_009587|LGALS9|3965|lectin, galactoside-binding, soluble, 9
hg18_v1_chr17_-_44794325_44794833	0.00249266	SOX2.p2	CR933680|ZNF652|22834|zinc finger protein 652	BC034987|ZNF652|22834|zinc finger protein 652	AK292667|ZNF652|22834|zinc finger protein 652	NM_001145365|ZNF652|22834|zinc finger protein 652	AB023141|ZNF652|22834|zinc finger protein 652	BC152440|ZNF652|22834|zinc finger protein 652	NM_014897|ZNF652|22834|zinc finger protein 652
hg18_v1_chr14_-_73250094_73250935	0.00246901	SOX2.p2	CR457112|PNMA1|9240|paraneoplastic antigen MA1	BC039577|PNMA1|9240|paraneoplastic antigen MA1	AK290980|PNMA1|9240|paraneoplastic antigen MA1	AF320308|PNMA1|9240|paraneoplastic antigen MA1	BC007712|PNMA1|9240|paraneoplastic antigen MA1	NM_006029|PNMA1|9240|paraneoplastic antigen MA1
hg18_v1_chr15_-_62782512_62782532	0.00246211	SOX2.p2	BC047755|OAZ2|4947|ornithine decarboxylase antizyme 2	NM_002537|OAZ2|4947|ornithine decarboxylase antizyme 2
hg18_v1_chr12_+_119391982_119392074	0.00245441	SOX2.p2	NM_001037494|DYNLL1|8655|dynein, light chain, LC8-type 1
hg18_v1_chr7_-_8268666_8268730	0.0024521	SOX2.p2	U38260|ICA1|3382|islet cell autoantigen 1, 69kDa	L01100|ICA1|3382|islet cell autoantigen 1, 69kDa	BC008640|ICA1|3382|islet cell autoantigen 1, 69kDa	BC005922|ICA1|3382|islet cell autoantigen 1, 69kDa	NM_004968|ICA1|3382|islet cell autoantigen 1, 69kDa
hg18_v1_chr6_-_38778849_38778858	0.00243776	SOX2.p2	BC015934|GLO1|2739|glyoxalase I	CR625986|GLO1|2739|glyoxalase I
hg18_v1_chr16_+_1668291_1668324	0.00243326	SOX2.p2	BC014438|HN1L|90861|hematological and neurological expressed 1-like	AK296888|HN1L|90861|hematological and neurological expressed 1-like	AK303927|HN1L|90861|hematological and neurological expressed 1-like	AY598330|HN1L|90861|hematological and neurological expressed 1-like	AK309930|HN1L|90861|hematological and neurological expressed 1-like
hg18_v1_chr10_-_88707299_88707404	0.00242783	SOX2.p2	BC072456|MMRN2|79812|multimerin 2	AK304727|MMRN2|79812|multimerin 2	AK023527|MMRN2|79812|multimerin 2	AK293822|MMRN2|79812|multimerin 2	BC094744|MMRN2|79812|multimerin 2	BC064415|MMRN2|79812|multimerin 2	AK308401|MMRN2|79812|multimerin 2	NM_024756|MMRN2|79812|multimerin 2
hg18_v1_chr5_-_177986695_177986763	0.0024104	SOX2.p2	AK308674|CLK4|57396|CDC-like kinase 4
hg18_v1_chr10_+_93548119_93548145	0.00238668	SOX2.p2	AF305081|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2	NM_025235|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2
hg18_v1_chr7_-_136678973_136678989	0.00238121	SOX2.p2	X52946|PTN|5764|pleiotrophin	AK313424|PTN|5764|pleiotrophin
hg18_v1_chrX_+_122923279_122923358	0.00237885	SOX2.p2	BC001765|STAG2|10735|stromal antigen 2
hg18_v1_chr1_+_171950759_171950854	0.00237805	SOX2.p2	AB026190|KLHL20|27252|kelch-like 20 (Drosophila)	BC063418|KLHL20|27252|kelch-like 20 (Drosophila)
hg18_v1_chr8_-_42817604_42817632	0.00236695	SOX2.p2	AL832077|THAP1|55145|THAP domain containing, apoptosis associated protein 1	BC021721|THAP1|55145|THAP domain containing, apoptosis associated protein 1	AK223231|THAP1|55145|THAP domain containing, apoptosis associated protein 1	AK001339|THAP1|55145|THAP domain containing, apoptosis associated protein 1	NM_018105|THAP1|55145|THAP domain containing, apoptosis associated protein 1	NM_199003|THAP1|55145|THAP domain containing, apoptosis associated protein 1
hg18_v1_chr6_+_144206165_144206200	0.002365	SOX2.p2	CR593625|LTV1|84946|LTV1 homolog (S. cerevisiae)	BC009855|LTV1|84946|LTV1 homolog (S. cerevisiae)	NM_032860|LTV1|84946|LTV1 homolog (S. cerevisiae)
hg18_v1_chr17_-_45626967_45627122	0.00233514	SOX2.p2	
hg18_v1_chr16_+_1668257_1668282	0.00232853	SOX2.p2	AK309909|HN1L|90861|hematological and neurological expressed 1-like	AK296998|HN1L|90861|hematological and neurological expressed 1-like	NM_144570|HN1L|90861|hematological and neurological expressed 1-like	AK023154|HN1L|90861|hematological and neurological expressed 1-like
hg18_v1_chr1_+_42920889_42920944	0.00231246	SOX2.p2	CR617953|YBX1|4904|Y box binding protein 1
hg18_v1_chr4_+_170778303_170778562	0.002312	SOX2.p2	AK304362|CLCN3|1182|chloride channel 3	BC054877|CLCN3|1182|chloride channel 3	BC026256|CLCN3|1182|chloride channel 3	BC136510|CLCN3|1182|chloride channel 3
hg18_v1_chr15_-_80611897_80611999	0.00230084	SOX2.p2	BC009407|RPS17|6218|ribosomal protein S17	CR618357|RPS17|6218|ribosomal protein S17	BC071928|RPS17|6218|ribosomal protein S17	M13932|RPS17|6218|ribosomal protein S17	AK311951|RPS17|6218|ribosomal protein S17	BC070222|RPS17|6218|ribosomal protein S17	BC022370|RPS17|6218|ribosomal protein S17	NM_001021|RPS17|6218|ribosomal protein S17	BC062715|RPS17|6218|ribosomal protein S17
hg18_v1_chr12_+_130945215_130945237	0.00227707	SOX2.p2	AF045458|ULK1|8408|unc-51-like kinase 1 (C. elegans)	NM_003565|ULK1|8408|unc-51-like kinase 1 (C. elegans)
hg18_v1_chr12_+_32003648_32003674	0.00227416	SOX2.p2	AK092399|C12orf35|55196|chromosome 12 open reading frame 35	BC140819|C12orf35|55196|chromosome 12 open reading frame 35
hg18_v1_chr11_-_6661093_6661207	0.00227027	SOX2.p2	CR611344|MRPL17|63875|mitochondrial ribosomal protein L17	CR457177|MRPL17|63875|mitochondrial ribosomal protein L17	CR596004|MRPL17|63875|mitochondrial ribosomal protein L17	DQ891581|MRPL17|63875|mitochondrial ribosomal protein L17	DQ894774|MRPL17|63875|mitochondrial ribosomal protein L17	DQ895036|MRPL17|63875|mitochondrial ribosomal protein L17	BC012306|MRPL17|63875|mitochondrial ribosomal protein L17	CR618867|MRPL17|63875|mitochondrial ribosomal protein L17	AK026857|MRPL17|63875|mitochondrial ribosomal protein L17	AF164797|MRPL17|63875|mitochondrial ribosomal protein L17	CR593225|MRPL17|63875|mitochondrial ribosomal protein L17	AF141338|MRPL17|63875|mitochondrial ribosomal protein L17	CR607645|MRPL17|63875|mitochondrial ribosomal protein L17	NM_022061|MRPL17|63875|mitochondrial ribosomal protein L17
hg18_v1_chr17_-_8020332_8020438	0.00224054	SOX2.p2	BC006292|TMEM107|84314|transmembrane protein 107	AK027813|TMEM107|84314|transmembrane protein 107	BC127649|TMEM107|84314|transmembrane protein 107	AY358525|TMEM107|84314|transmembrane protein 107	BC070231|TMEM107|84314|transmembrane protein 107	NM_032354|TMEM107|84314|transmembrane protein 107	NM_183065|TMEM107|84314|transmembrane protein 107
hg18_v1_chr9_-_98368913_98369023	0.00223831	SOX2.p2	AK126388|CDC14B|8555|CDC14 cell division cycle 14 homolog B (S. cerevisiae)	NM_001077181|CDC14B|8555|CDC14 cell division cycle 14 homolog B (S. cerevisiae)
hg18_v1_chr7_+_120752656_120752656	0.00221688	SOX2.p2	AF152584|WNT16|51384|wingless-type MMTV integration site family, member 16	NM_016087|WNT16|51384|wingless-type MMTV integration site family, member 16
hg18_v1_chr20_-_30794857_30794972	0.00221661	SOX2.p2	AY542162|COMMD7|149951|COMM domain containing 7	BC000628|COMMD7|149951|COMM domain containing 7	AK097059|COMMD7|149951|COMM domain containing 7	AK027893|COMMD7|149951|COMM domain containing 7
hg18_v1_chr15_-_71712605_71712670	0.0021836	SOX2.p2	CR615564|NPTN|27020|neuroplastin	CR615149|NPTN|27020|neuroplastin	BC117462|NPTN|27020|neuroplastin	BC143880|NPTN|27020|neuroplastin	BC143881|NPTN|27020|neuroplastin	AK313441|NPTN|27020|neuroplastin	AK314248|NPTN|27020|neuroplastin	BC030773|NPTN|27020|neuroplastin	CR936779|NPTN|27020|neuroplastin	AK304478|NPTN|27020|neuroplastin	AK297184|NPTN|27020|neuroplastin
hg18_v1_chr19_-_48815572_48815607	0.00218353	SOX2.p2	BC015950|ZNF428|126299|zinc finger protein 428	AY257197|ZNF428|126299|zinc finger protein 428	BC045799|ZNF428|126299|zinc finger protein 428
hg18_v1_chr2_-_89223666_89223742	0.00218202	SOX2.p2	BC073793|IGKC|3514|immunoglobulin kappa constant	BC032451|IGK@|50802|immunoglobulin kappa locus	BC092453|IGKC|3514|immunoglobulin kappa constant	AK129807|IGK@|50802|immunoglobulin kappa locus	BC016380|IGK@|50802|immunoglobulin kappa locus	BC062704|IGK@|50802|immunoglobulin kappa locus
hg18_v1_chr17_+_56032271_56032381	0.00216768	SOX2.p2	BC060877|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	AK312902|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	NM_003620|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	AK299773|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	CR618625|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	U78305|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D
hg18_v1_chr1_+_234753361_234753361	0.0021646	SOX2.p2	AF074000|LGALS8|3964|lectin, galactoside-binding, soluble, 8	AF074001|LGALS8|3964|lectin, galactoside-binding, soluble, 8	AF074002|LGALS8|3964|lectin, galactoside-binding, soluble, 8	NM_006499|LGALS8|3964|lectin, galactoside-binding, soluble, 8	NM_201543|LGALS8|3964|lectin, galactoside-binding, soluble, 8
hg18_v1_chr12_-_43556899_43556899	0.00215859	SOX2.p2	AK299733|NELL2|4753|NEL-like 2 (chicken)	NM_001145107|NELL2|4753|NEL-like 2 (chicken)
hg18_v1_chr5_+_96023627_96023742	0.00215047	SOX2.p2	BC016066|CAST|831|calpastatin	NM_001042440|CAST|831|calpastatin
hg18_v1_chr10_-_128067001_128067041	0.00214648	SOX2.p2	AY358878|ADAM12|8038|ADAM metallopeptidase domain 12	AF023476|ADAM12|8038|ADAM metallopeptidase domain 12	AF023477|ADAM12|8038|ADAM metallopeptidase domain 12	AK127856|ADAM12|8038|ADAM metallopeptidase domain 12
hg18_v1_chr19_+_18391211_18391240	0.00213117	SOX2.p2	NM_001009998|SSBP4|170463|single stranded DNA binding protein 4	NM_032627|SSBP4|170463|single stranded DNA binding protein 4	BC000274|SSBP4|170463|single stranded DNA binding protein 4	CR608876|SSBP4|170463|single stranded DNA binding protein 4	AK098429|SSBP4|170463|single stranded DNA binding protein 4
hg18_v1_chr2_-_102719732_102719799	0.00212687	SOX2.p2	AK290589|MFSD9|84804|major facilitator superfamily domain containing 9	CR599593|MFSD9|84804|major facilitator superfamily domain containing 9	AK075376|MFSD9|84804|major facilitator superfamily domain containing 9	BC006242|MFSD9|84804|major facilitator superfamily domain containing 9	AK307178|MFSD9|84804|major facilitator superfamily domain containing 9	NM_032718|MFSD9|84804|major facilitator superfamily domain containing 9	AK296768|MFSD9|84804|major facilitator superfamily domain containing 9
hg18_v1_chr6_+_18263514_18263755	0.0021113	SOX2.p2	BC113093|KDM1B|221656|lysine (K)-specific demethylase 1B	NM_153042|KDM1B|221656|lysine (K)-specific demethylase 1B	AK125318|KDM1B|221656|lysine (K)-specific demethylase 1B
hg18_v1_chr8_+_19841120_19841170	0.00207472	SOX2.p2	X14390|LPL|4023|lipoprotein lipase	BC011353|LPL|4023|lipoprotein lipase
hg18_v1_chr11_-_7775064_7775095	0.00206644	SOX2.p2	AF173006|OR5P2|120065|olfactory receptor, family 5, subfamily P, member 2	NM_153444|OR5P2|120065|olfactory receptor, family 5, subfamily P, member 2	BC101710|OR5P2|120065|olfactory receptor, family 5, subfamily P, member 2	BC113557|OR5P2|120065|olfactory receptor, family 5, subfamily P, member 2
hg18_v1_chr7_+_102502816_102502845	0.00206376	SOX2.p2	AK075500|ARMC10|83787|armadillo repeat containing 10	CR613788|ARMC10|83787|armadillo repeat containing 10	AK301565|ARMC10|83787|armadillo repeat containing 10	AK225082|ARMC10|83787|armadillo repeat containing 10	AK291818|ARMC10|83787|armadillo repeat containing 10	BC003586|ARMC10|83787|armadillo repeat containing 10
hg18_v1_chr9_-_106338914_106338957	0.00206292	SOX2.p2	NM_001001961|OR13C3|138803|olfactory receptor, family 13, subfamily C, member 3	BC136949|OR13C3|138803|olfactory receptor, family 13, subfamily C, member 3	BC136952|OR13C3|138803|olfactory receptor, family 13, subfamily C, member 3
hg18_v1_chr17_-_43328141_43328158	0.00204486	SOX2.p2	
hg18_v1_chr10_+_104211134_104211147	0.00204446	SOX2.p2	AK296583|TMEM180|79847|transmembrane protein 180
hg18_v1_chr8_+_92330691_92330722	0.00204203	SOX2.p2	AJ413229|SLC26A7|115111|solute carrier family 26, member 7	NM_052832|SLC26A7|115111|solute carrier family 26, member 7	NM_134266|SLC26A7|115111|solute carrier family 26, member 7	AF331521|SLC26A7|115111|solute carrier family 26, member 7	AJ413228|SLC26A7|115111|solute carrier family 26, member 7	AJ413230|SLC26A7|115111|solute carrier family 26, member 7
hg18_v1_chr16_-_1772305_1772567	0.00199986	SOX2.p2	BC041897|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	BC047441|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	BC007588|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	BC035065|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	CR622113|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	CR604082|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	BC024244|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	AK074190|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	CR596537|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	CR595592|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	BC065515|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	CR592259|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	CR605628|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	CR610957|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	CR624932|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	CR591468|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3
hg18_v1_chr10_+_104211148_104211197	0.00199618	SOX2.p2	AK301612|TMEM180|79847|transmembrane protein 180	AY358808|TMEM180|79847|transmembrane protein 180	NM_024789|TMEM180|79847|transmembrane protein 180
hg18_v1_chr17_-_2250967_2251165	0.00198953	SOX2.p2	X96401|MNT|4335|MAX binding protein	NM_020310|MNT|4335|MAX binding protein	AK291596|MNT|4335|MAX binding protein
hg18_v1_chr12_+_122762835_122762863	0.00197629	SOX2.p2	BC022300|ATP6V0A2|23545|ATPase, H+ transporting, lysosomal V0 subunit a2
hg18_v1_chr6_+_37895244_37895293	0.00197468	SOX2.p2	NM_021943|ZFAND3|60685|zinc finger, AN1-type domain 3
hg18_v1_chr15_-_26240844_26240903	0.00193464	SOX2.p2	AF071172|HERC2|8924|hect domain and RLD 2	BC015486|HERC2|8924|hect domain and RLD 2	BC142951|HERC2|8924|hect domain and RLD 2	BC045544|HERC2|8924|hect domain and RLD 2	NM_004667|HERC2|8924|hect domain and RLD 2	AF041081|HERC2P2|400322|hect domain and RLD 2 pseudogene 2
hg18_v1_chr15_+_48434397_48434507	0.00192874	SOX2.p2	BC014238|LOC100129387|100129387|hypothetical LOC100129387	BC004103|LOC100129387|100129387|hypothetical LOC100129387
hg18_v1_chr11_+_68124400_68124505	0.00190756	SOX2.p2	AK001920|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3
hg18_v1_chr1_-_31251315_31251371	0.00190285	SOX2.p2	CR592163|PUM1|9698|pumilio homolog 1 (Drosophila)
hg18_v1_chr8_+_60194328_60194331	0.00190275	SOX2.p2	
hg18_v1_chr10_+_94584449_94584449	0.00189295	SOX2.p2	NM_001013848|EXOC6|54536|exocyst complex component 6
hg18_v1_chr1_+_200124620_200124808	0.00188917	SOX2.p2	BC009558|SHISA4|149345|shisa homolog 4 (Xenopus laevis)	AY358589|SHISA4|149345|shisa homolog 4 (Xenopus laevis)	CR626801|SHISA4|149345|shisa homolog 4 (Xenopus laevis)	AK294106|SHISA4|149345|shisa homolog 4 (Xenopus laevis)	BC066977|SHISA4|149345|shisa homolog 4 (Xenopus laevis)	BC104444|SHISA4|149345|shisa homolog 4 (Xenopus laevis)	BC104445|SHISA4|149345|shisa homolog 4 (Xenopus laevis)	EU832101|SHISA4|149345|shisa homolog 4 (Xenopus laevis)	EU832195|SHISA4|149345|shisa homolog 4 (Xenopus laevis)	BC061908|SHISA4|149345|shisa homolog 4 (Xenopus laevis)
hg18_v1_chr1_-_222100296_222100338	0.00188665	SOX2.p2	NM_001031685|TP53BP2|7159|tumor protein p53 binding protein, 2	NM_005426|TP53BP2|7159|tumor protein p53 binding protein, 2
hg18_v1_chr10_+_103995248_103995295	0.0018729	SOX2.p2	BC094763|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1	AK025330|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1	BC032543|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1
hg18_v1_chr3_-_48204332_48204532	0.00185731	SOX2.p2	AF277722|CDC25A|993|cell division cycle 25 homolog A (S. pombe)	AY137580|CDC25A|993|cell division cycle 25 homolog A (S. pombe)	EU812118|CDC25A|993|cell division cycle 25 homolog A (S. pombe)	DQ890753|CDC25A|993|cell division cycle 25 homolog A (S. pombe)	DQ892919|CDC25A|993|cell division cycle 25 homolog A (S. pombe)	DQ896168|CDC25A|993|cell division cycle 25 homolog A (S. pombe)	AK290554|CDC25A|993|cell division cycle 25 homolog A (S. pombe)
hg18_v1_chr14_-_105279740_105279770	0.00185678	SOX2.p2	
hg18_v1_chr8_-_133140808_133140808	0.00183783	SOX2.p2	AK297911|OC90|729330|otoconin 90	NM_001080399|OC90|729330|otoconin 90
hg18_v1_chr19_+_57464635_57464657	0.00183613	SOX2.p2	BX648899|ZNF766|90321|zinc finger protein 766	NM_001010851|ZNF766|90321|zinc finger protein 766	BC136833|ZNF766|90321|zinc finger protein 766	BC136834|ZNF766|90321|zinc finger protein 766	AK024074|ZNF766|90321|zinc finger protein 766
hg18_v1_chr1_+_166461881_166461953	0.00180343	SOX2.p2	BC068098|SFT2D2|375035|SFT2 domain containing 2
hg18_v1_chr6_-_42822525_42822535	0.00175258	SOX2.p2	BC017479|TBCC|6903|tubulin folding cofactor C
hg18_v1_chr17_+_54652609_54652752	0.00173823	SOX2.p2	NM_001165993|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1	NM_001165994|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1	NM_182569|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1	AK094770|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1	AY271346|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1	BC034432|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1	EU192951|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1
hg18_v1_chr12_-_70343790_70343940	0.00172108	SOX2.p2	AB011118|ZFC3H1|196441|zinc finger, C3H1-type containing	BC073843|ZFC3H1|196441|zinc finger, C3H1-type containing	BC064336|ZFC3H1|196441|zinc finger, C3H1-type containing	BX647709|ZFC3H1|196441|zinc finger, C3H1-type containing	BC015679|ZFC3H1|196441|zinc finger, C3H1-type containing
hg18_v1_chr19_+_57464659_57464678	0.00170192	SOX2.p2	BX538183|ZNF766|90321|zinc finger protein 766	EU832461|ZNF766|90321|zinc finger protein 766	EU832543|ZNF766|90321|zinc finger protein 766
hg18_v1_chr6_+_26264537_26264618	0.00170169	SOX2.p2	NM_005321|HIST1H1E|3008|histone cluster 1, H1e	BC096168|HIST1H1E|3008|histone cluster 1, H1e	BC096169|HIST1H1E|3008|histone cluster 1, H1e	BC096170|HIST1H1E|3008|histone cluster 1, H1e	BC099632|HIST1H1E|3008|histone cluster 1, H1e	EF065554|HIST1H1E|3008|histone cluster 1, H1e	EF065555|HIST1H1E|3008|histone cluster 1, H1e
hg18_v1_chr1_+_110683467_110683568	0.00169824	SOX2.p2	AF368062|RBM15|64783|RNA binding motif protein 15	AF368063|RBM15|64783|RNA binding motif protein 15	AF368064|RBM15|64783|RNA binding motif protein 15	NM_022768|RBM15|64783|RNA binding motif protein 15	BC098140|RBM15|64783|RNA binding motif protein 15	BC103493|RBM15|64783|RNA binding motif protein 15	BC103507|RBM15|64783|RNA binding motif protein 15	BC103660|RBM15|64783|RNA binding motif protein 15
hg18_v1_chr12_+_381001_381083	0.00169803	SOX2.p2	NM_001130146|CCDC77|84318|coiled-coil domain containing 77	NM_032358|CCDC77|84318|coiled-coil domain containing 77	AK293165|CCDC77|84318|coiled-coil domain containing 77	CR618406|CCDC77|84318|coiled-coil domain containing 77	AK027638|CCDC77|84318|coiled-coil domain containing 77
hg18_v1_chr22_-_16020168_16020190	0.00167305	SOX2.p2	NM_033070|CECR5|27440|cat eye syndrome chromosome region, candidate 5
hg18_v1_chr5_+_149549712_149549843	0.00166297	SOX2.p2	AK096607|SLC6A7|6534|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7	NM_014228|SLC6A7|6534|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7	AK312309|SLC6A7|6534|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7	AK308895|SLC6A7|6534|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7
hg18_v1_chr9_-_129679760_129679842	0.00166029	SOX2.p2	BC001116|AK1|203|adenylate kinase 1	BC036803|AK1|203|adenylate kinase 1	AK313758|AK1|203|adenylate kinase 1	BC100022|AK1|203|adenylate kinase 1	NM_000476|AK1|203|adenylate kinase 1
hg18_v1_chr1_-_156635879_156635879	0.00165357	SOX2.p2	NM_001004475|OR10T2|128360|olfactory receptor, family 10, subfamily T, member 2
hg18_v1_chr17_-_34603577_34603661	0.00165191	SOX2.p2	AB209176|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit
hg18_v1_chr7_-_105712646_105712873	0.00164481	SOX2.p2	BC072439|NAMPT|10135|nicotinamide phosphoribosyltransferase	BC106046|NAMPT|10135|nicotinamide phosphoribosyltransferase	CR593609|NAMPT|10135|nicotinamide phosphoribosyltransferase	NM_005746|NAMPT|10135|nicotinamide phosphoribosyltransferase
hg18_v1_chr1_-_154988045_154988075	0.00163952	SOX2.p2	CR626656|HDGF|3068|hepatoma-derived growth factor
hg18_v1_chr1_-_144322271_144322287	0.00163618	SOX2.p2	CR608817|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)
hg18_v1_chr5_-_150517499_150517526	0.00162299	SOX2.p2	AK126836|ANXA6|309|annexin A6	AK290672|ANXA6|309|annexin A6	AK130077|ANXA6|309|annexin A6	Y00097|ANXA6|309|annexin A6	CR596318|ANXA6|309|annexin A6	AK298582|ANXA6|309|annexin A6
hg18_v1_chr19_-_14490160_14490226	0.00161638	SOX2.p2	CR536485|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1	CR541677|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1	CR620425|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1	BC019827|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1	BC002352|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1	BC013157|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1	D49547|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1	NM_006145|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1	X62421|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1
hg18_v1_chr19_-_864201_864201	0.0016086	SOX2.p2	CR606082|C19orf22|91300|chromosome 19 open reading frame 22
hg18_v1_chr6_+_88356503_88356610	0.00159771	SOX2.p2	NM_001197259|ORC3|23595|origin recognition complex, subunit 3	NM_012381|ORC3|23595|origin recognition complex, subunit 3	NM_181837|ORC3|23595|origin recognition complex, subunit 3	CR619723|ORC3|23595|origin recognition complex, subunit 3	AF125507|ORC3|23595|origin recognition complex, subunit 3	AK316298|ORC3|23595|origin recognition complex, subunit 3	AL080116|ORC3|23595|origin recognition complex, subunit 3	AK222795|ORC3|23595|origin recognition complex, subunit 3	AK303056|ORC3|23595|origin recognition complex, subunit 3	AF093535|ORC3|23595|origin recognition complex, subunit 3	AK303195|ORC3|23595|origin recognition complex, subunit 3	AK302750|ORC3|23595|origin recognition complex, subunit 3	BC047689|ORC3|23595|origin recognition complex, subunit 3	BC035494|ORC3|23595|origin recognition complex, subunit 3	AK315911|ORC3|23595|origin recognition complex, subunit 3	AK303182|ORC3|23595|origin recognition complex, subunit 3	EU446990|ORC3|23595|origin recognition complex, subunit 3	EU831634|ORC3|23595|origin recognition complex, subunit 3	AF135044|ORC3|23595|origin recognition complex, subunit 3
hg18_v1_chr1_-_201422368_201422433	0.00159458	SOX2.p2	BT007223|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	DQ890777|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	DQ893937|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	EU831608|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	EU831695|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	BC038354|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)
hg18_v1_chr11_-_107234702_107234729	0.00159016	SOX2.p2	CR595056|SLC35F2|54733|solute carrier family 35, member F2	AK023080|SLC35F2|54733|solute carrier family 35, member F2	BC048302|SLC35F2|54733|solute carrier family 35, member F2
hg18_v1_chrX_+_70669636_70669665	0.00158589	SOX2.p2	NM_181672|OGT|8473|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)	NM_181673|OGT|8473|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)	AL833085|OGT|8473|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)
hg18_v1_chr19_-_60827732_60827745	0.00156672	SOX2.p2	CR618267|ZNF784|147808|zinc finger protein 784	AK074859|ZNF784|147808|zinc finger protein 784
hg18_v1_chr6_-_105414475_105414488	0.00156284	SOX2.p2	AK131207|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1	NM_020771|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1
hg18_v1_chr11_-_10786875_10787026	0.00154456	SOX2.p2	BC018975|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2
hg18_v1_chr17_-_59172852_59172895	0.0015432	SOX2.p2	BC043641|STRADA|92335|STE20-related kinase adaptor alpha	CR601658|STRADA|92335|STE20-related kinase adaptor alpha	AL832407|STRADA|92335|STE20-related kinase adaptor alpha	AK301331|STRADA|92335|STE20-related kinase adaptor alpha	AK075005|STRADA|92335|STE20-related kinase adaptor alpha
hg18_v1_chr3_-_185218311_185218459	0.0015416	SOX2.p2	BC142670|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	CR619835|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	BC142719|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	CR590924|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	U83661|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	AF104942|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	AY754874|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	AY754875|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	AY754876|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	AB209454|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	BC051358|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	NM_001023587|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	NM_005688|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5
hg18_v1_chr16_+_68353662_68353716	0.00150759	SOX2.p2	AK312792|WWP2|11060|WW domain containing E3 ubiquitin protein ligase 2
hg18_v1_chr8_-_72919161_72919204	0.00150171	SOX2.p2	AF060154|MSC|9242|musculin
hg18_v1_chr22_-_16636748_16636812	0.00148946	SOX2.p2	AF250233|BID|637|BH3 interacting domain death agonist	AK094795|BID|637|BH3 interacting domain death agonist	BC036364|BID|637|BH3 interacting domain death agonist	NM_197966|BID|637|BH3 interacting domain death agonist
hg18_v1_chr19_-_60461656_60461717	0.00146241	SOX2.p2	BC094753|PPP6R1|22870|protein phosphatase 6, regulatory subunit 1
hg18_v1_chr7_+_44802798_44802826	0.00142926	SOX2.p2	AK290851|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC005982|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AK130101|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AK293003|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC007104|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC013915|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AK026569|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AK297340|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AK316564|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC093076|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AK290085|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC005320|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC106030|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC073992|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	CR626590|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC003026|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	CR618683|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	CR603867|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC000689|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)
hg18_v1_chr16_+_31098931_31098958	0.00141901	SOX2.p2	NM_001170634|FUS|2521|fused in sarcoma	NM_001170937|FUS|2521|fused in sarcoma	NM_004960|FUS|2521|fused in sarcoma	CR591758|FUS|2521|fused in sarcoma
hg18_v1_chr16_+_8714687_8714719	0.00137531	SOX2.p2	AK054834|ABAT|18|4-aminobutyrate aminotransferase
hg18_v1_chr12_+_6950204_6950336	0.00133188	SOX2.p2	NM_006331|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)	BC055314|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)	AK298207|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)
hg18_v1_chr5_-_176671437_176671544	0.00131564	SOX2.p2	DQ892734|MXD3|83463|MAX dimerization protein 3	DQ895981|MXD3|83463|MAX dimerization protein 3	DQ896213|MXD3|83463|MAX dimerization protein 3	BC041690|MXD3|83463|MAX dimerization protein 3	CR613684|MXD3|83463|MAX dimerization protein 3	BC000745|MXD3|83463|MAX dimerization protein 3	BC032586|MXD3|83463|MAX dimerization protein 3	AF114834|MXD3|83463|MAX dimerization protein 3	CR626344|MXD3|83463|MAX dimerization protein 3	AK222579|MXD3|83463|MAX dimerization protein 3	AK316468|MXD3|83463|MAX dimerization protein 3	AK057034|MXD3|83463|MAX dimerization protein 3	AK303397|MXD3|83463|MAX dimerization protein 3
hg18_v1_chr9_-_35105844_35105911	0.00130727	SOX2.p2	AK022837|KIAA1539|80256|KIAA1539	AK021622|KIAA1539|80256|KIAA1539	BC004406|KIAA1539|80256|KIAA1539	NM_025182|KIAA1539|80256|KIAA1539	AK307682|KIAA1539|80256|KIAA1539
hg18_v1_chr12_-_70343943_70344015	0.00130643	SOX2.p2	NM_144982|ZFC3H1|196441|zinc finger, C3H1-type containing
hg18_v1_chr10_+_103995297_103995417	0.00130633	SOX2.p2	AF068755|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1	NM_004193|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1	D87435|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1	BC117681|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1	BC117682|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1
hg18_v1_chr12_+_100795213_100795286	0.00128376	SOX2.p2	NM_018370|DRAM1|55332|DNA-damage regulated autophagy modulator 1	BC018435|DRAM1|55332|DNA-damage regulated autophagy modulator 1
hg18_v1_chr17_-_21097170_21097348	0.00128295	SOX2.p2	AK126856|C17orf103|256302|chromosome 17 open reading frame 103	NM_152914|C17orf103|256302|chromosome 17 open reading frame 103	BC029527|C17orf103|256302|chromosome 17 open reading frame 103
hg18_v1_chr10_-_127397990_127398058	0.00127827	SOX2.p2	AK094354|FLJ37035|399821|hypothetical LOC399821
hg18_v1_chr7_-_99411573_99411670	0.00127012	SOX2.p2	D90427|AZGP1|563|alpha-2-glycoprotein 1, zinc-binding	M76707|AZGP1|563|alpha-2-glycoprotein 1, zinc-binding	BC014470|AZGP1|563|alpha-2-glycoprotein 1, zinc-binding	X59766|AZGP1|563|alpha-2-glycoprotein 1, zinc-binding	BC005306|AZGP1|563|alpha-2-glycoprotein 1, zinc-binding	BC005908|AZGP1|563|alpha-2-glycoprotein 1, zinc-binding	BC033830|AZGP1|563|alpha-2-glycoprotein 1, zinc-binding	NM_001185|AZGP1|563|alpha-2-glycoprotein 1, zinc-binding
hg18_v1_chr3_+_173240126_173240131	0.00126671	SOX2.p2	AK127826|FNDC3B|64778|fibronectin type III domain containing 3B
hg18_v1_chr12_+_70343943_70344203	0.00126573	SOX2.p2	NM_031435|THAP2|83591|THAP domain containing, apoptosis associated protein 2	AL136607|THAP2|83591|THAP domain containing, apoptosis associated protein 2	BC008358|THAP2|83591|THAP domain containing, apoptosis associated protein 2
hg18_v1_chr9_-_35738875_35739029	0.0012581	SOX2.p2	AK027884|GBA2|57704|glucosidase, beta (bile acid) 2	AL834306|GBA2|57704|glucosidase, beta (bile acid) 2
hg18_v1_chr6_-_105414401_105414435	0.00124512	SOX2.p2	AK291760|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1
hg18_v1_chr10_-_104252394_104252501	0.00122597	SOX2.p2	AM393135|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	DQ892689|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	DQ895934|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	BC026016|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	CR610318|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	BC000693|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	CR600058|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	Z14978|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	X82206|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK302072|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK312506|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK297362|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK297620|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	NM_005736|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)
hg18_v1_chr6_-_33864863_33864875	0.00121855	SOX2.p2	BC051803|LEMD2|221496|LEM domain containing 2
hg18_v1_chr2_-_127817143_127817274	0.00121652	SOX2.p2	AF239798|MAP3K2|10746|mitogen-activated protein kinase kinase kinase 2	NM_006609|MAP3K2|10746|mitogen-activated protein kinase kinase kinase 2	BC136293|MAP3K2|10746|mitogen-activated protein kinase kinase kinase 2	AF111105|MAP3K2|10746|mitogen-activated protein kinase kinase kinase 2
hg18_v1_chr3_-_49041862_49041887	0.00121331	SOX2.p2	NM_000884|IMPDH2|3615|IMP (inosine 5'-monophosphate) dehydrogenase 2
hg18_v1_chr19_-_864194_864200	0.00121284	SOX2.p2	CR624510|C19orf22|91300|chromosome 19 open reading frame 22	BC012775|C19orf22|91300|chromosome 19 open reading frame 22
hg18_v1_chr20_+_43895802_43895965	0.00120238	SOX2.p2	AK293443|SNX21|90203|sorting nexin family member 21	BC012904|SNX21|90203|sorting nexin family member 21	NM_001042632|SNX21|90203|sorting nexin family member 21	NM_001042633|SNX21|90203|sorting nexin family member 21	NM_033421|SNX21|90203|sorting nexin family member 21	NM_152897|SNX21|90203|sorting nexin family member 21	AF523834|SNX21|90203|sorting nexin family member 21	AL591562|SNX21|90203|sorting nexin family member 21	BC019823|SNX21|90203|sorting nexin family member 21	AF395845|SNX21|90203|sorting nexin family member 21
hg18_v1_chr16_+_56054049_56054069	0.00119506	SOX2.p2	NM_032940|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa
hg18_v1_chr2_+_160277273_160277300	0.00117775	SOX2.p2	BC065014|MARCH7|64844|membrane-associated ring finger (C3HC4) 7
hg18_v1_chr4_+_75242671_75242788	0.00113347	SOX2.p2	BC037529|MTHFD2L|441024|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like	NM_001144978|MTHFD2L|441024|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like	BC041943|MTHFD2L|441024|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like
hg18_v1_chr3_+_10043139_10043182	0.0010948	SOX2.p2	BC013582|FANCD2|2177|Fanconi anemia, complementation group D2	BC038666|FANCD2|2177|Fanconi anemia, complementation group D2
hg18_v1_chr18_-_42956645_42956729	0.00109453	SOX2.p2	CR533488|IER3IP1|51124|immediate early response 3 interacting protein 1	DQ892866|IER3IP1|51124|immediate early response 3 interacting protein 1	DQ896115|IER3IP1|51124|immediate early response 3 interacting protein 1	EU831653|IER3IP1|51124|immediate early response 3 interacting protein 1	EU831736|IER3IP1|51124|immediate early response 3 interacting protein 1	CR596950|IER3IP1|51124|immediate early response 3 interacting protein 1	BC017391|IER3IP1|51124|immediate early response 3 interacting protein 1	BC010888|IER3IP1|51124|immediate early response 3 interacting protein 1	AF164798|IER3IP1|51124|immediate early response 3 interacting protein 1	AF371963|IER3IP1|51124|immediate early response 3 interacting protein 1	CR596209|IER3IP1|51124|immediate early response 3 interacting protein 1	AF125100|IER3IP1|51124|immediate early response 3 interacting protein 1	AL136667|IER3IP1|51124|immediate early response 3 interacting protein 1	CR614259|IER3IP1|51124|immediate early response 3 interacting protein 1
hg18_v1_chr18_+_66107222_66107260	0.00108858	SOX2.p2	BC020082|SOCS6|9306|suppressor of cytokine signaling 6
hg18_v1_chr8_-_119192985_119193299	0.00108682	SOX2.p2	AK313129|EXT1|2131|exostosin 1	S79639|EXT1|2131|exostosin 1	NM_000127|EXT1|2131|exostosin 1
hg18_v1_chr19_-_55706156_55706288	0.0010797	SOX2.p2	AF247787|JOSD2|126119|Josephin domain containing 2	NM_138334|JOSD2|126119|Josephin domain containing 2	BC051380|JOSD2|126119|Josephin domain containing 2	BC062416|JOSD2|126119|Josephin domain containing 2	AK131052|JOSD2|126119|Josephin domain containing 2
hg18_v1_chr6_-_47385599_47385599	0.00107755	SOX2.p2	AK001504|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg18_v1_chr13_+_33290205_33290250	0.00107459	SOX2.p2	NM_002915|RFC3|5983|replication factor C (activator 1) 3, 38kDa	NM_181558|RFC3|5983|replication factor C (activator 1) 3, 38kDa	CR598980|RFC3|5983|replication factor C (activator 1) 3, 38kDa
hg18_v1_chr20_+_30259359_30259359	0.00106504	SOX2.p2	D80002|POFUT1|23509|protein O-fucosyltransferase 1
hg18_v1_chr17_+_22982372_22982378	0.00105357	SOX2.p2	BC105942|LGALS9|3965|lectin, galactoside-binding, soluble, 9	BC105944|LGALS9|3965|lectin, galactoside-binding, soluble, 9	CR616420|LGALS9|3965|lectin, galactoside-binding, soluble, 9
hg18_v1_chr12_+_132167057_132167119	0.00105238	SOX2.p2	NM_003440|ZNF140|7699|zinc finger protein 140
hg18_v1_chr15_-_63068824_63068900	0.00101767	SOX2.p2	AF212231|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	NM_001127889|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)
hg18_v1_chrX_-_106846684_106846886	0.000994179	SOX2.p2	CR533450|TSC22D3|1831|TSC22 domain family, member 3	EU831656|TSC22D3|1831|TSC22 domain family, member 3	EU831739|TSC22D3|1831|TSC22 domain family, member 3	AK311834|TSC22D3|1831|TSC22 domain family, member 3	AY007119|TSC22D3|1831|TSC22 domain family, member 3	CR599119|TSC22D3|1831|TSC22 domain family, member 3	AK127938|TSC22D3|1831|TSC22 domain family, member 3
hg18_v1_chr3_-_49041817_49041851	0.000991702	SOX2.p2	BC009236|IMPDH2|3615|IMP (inosine 5'-monophosphate) dehydrogenase 2	BC015567|IMPDH2|3615|IMP (inosine 5'-monophosphate) dehydrogenase 2	BC012840|IMPDH2|3615|IMP (inosine 5'-monophosphate) dehydrogenase 2	J04208|IMPDH2|3615|IMP (inosine 5'-monophosphate) dehydrogenase 2	BC006124|IMPDH2|3615|IMP (inosine 5'-monophosphate) dehydrogenase 2	AK293397|IMPDH2|3615|IMP (inosine 5'-monophosphate) dehydrogenase 2
hg18_v1_chr11_+_111552298_111552332	0.000981848	SOX2.p2	NM_001037290|BCO2|83875|beta-carotene oxygenase 2	AK027801|BCO2|83875|beta-carotene oxygenase 2	AK297853|BCO2|83875|beta-carotene oxygenase 2	AB096252|BCO2|83875|beta-carotene oxygenase 2
hg18_v1_chr20_-_44151924_44151938	0.000966089	SOX2.p2	BC056872|NCOA5|57727|nuclear receptor coactivator 5
hg18_v1_chr4_-_120769275_120769428	0.000956469	SOX2.p2	AM393036|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AM393270|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AM393448|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AK290189|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	BC126233|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AJ004865|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AF155192|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AF043731|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	NM_001083|PDE5A|8654|phosphodiesterase 5A, cGMP-specific
hg18_v1_chrX_+_102078855_102078855	0.000956	SOX2.p2	BC101169|RAB40AL|282808|RAB40A, member RAS oncogene family-like	BC101170|RAB40AL|282808|RAB40A, member RAS oncogene family-like	BC101171|RAB40AL|282808|RAB40A, member RAS oncogene family-like	BC101172|RAB40AL|282808|RAB40A, member RAS oncogene family-like	NM_001031834|RAB40AL|282808|RAB40A, member RAS oncogene family-like
hg18_v1_chr8_+_17824631_17824722	0.000954043	SOX2.p2	L27841|PCM1|5108|pericentriolar material 1	NM_006197|PCM1|5108|pericentriolar material 1
hg18_v1_chr2_+_190357354_190357536	0.000938222	SOX2.p2	BC036376|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	BC008410|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AK295602|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AK308311|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	BC084548|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AY540751|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AK297440|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	BC096330|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	BC096331|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	BC096332|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AK316215|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AK304634|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)
hg18_v1_chr6_-_47385605_47385703	0.000922615	SOX2.p2	NM_014452|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg18_v1_chr3_+_134985566_134985566	0.00091859	SOX2.p2	NM_021203|SRPRB|58477|signal recognition particle receptor, B subunit
hg18_v1_chr12_+_77782579_77782633	0.000905158	SOX2.p2	AK126908|SYT1|6857|synaptotagmin I	NM_005639|SYT1|6857|synaptotagmin I
hg18_v1_chr2_+_198088559_198088564	0.000901911	SOX2.p2	AK289377|MOBKL3|25843|MOB1, Mps One Binder kinase activator-like 3 (yeast)	AF250319|MOBKL3|25843|MOB1, Mps One Binder kinase activator-like 3 (yeast)	NM_199482|MOBKL3|25843|MOB1, Mps One Binder kinase activator-like 3 (yeast)
hg18_v1_chr22_-_30071761_30071970	0.000891214	SOX2.p2	AK291803|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	BC021091|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1
hg18_v1_chr17_+_76827699_76827760	0.000889879	SOX2.p2	BC127837|C17orf89|284184|chromosome 17 open reading frame 89	NM_001086521|C17orf89|284184|chromosome 17 open reading frame 89	BC079831|C17orf89|284184|chromosome 17 open reading frame 89
hg18_v1_chr1_+_200124412_200124439	0.000889086	SOX2.p2	AK311191|SHISA4|149345|shisa homolog 4 (Xenopus laevis)	NM_198149|SHISA4|149345|shisa homolog 4 (Xenopus laevis)	AK316312|SHISA4|149345|shisa homolog 4 (Xenopus laevis)	BC111855|SHISA4|149345|shisa homolog 4 (Xenopus laevis)
hg18_v1_chr6_-_53321706_53321901	0.000884804	SOX2.p2	AK299674|ELOVL5|60481|ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)	AK302948|ELOVL5|60481|ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)	NM_021814|ELOVL5|60481|ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)	AF338241|ELOVL5|60481|ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)
hg18_v1_chr19_+_62483093_62483243	0.000868689	SOX2.p2	AK298106|ZNF460|10794|zinc finger protein 460
hg18_v1_chrX_+_48934831_48934838	0.000838999	SOX2.p2	
hg18_v1_chr2_-_163403274_163403467	0.000821803	SOX2.p2	AF032897|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7
hg18_v1_chrX_-_119486874_119487030	0.000819684	SOX2.p2	AK304405|LAMP2|3920|lysosomal-associated membrane protein 2
hg18_v1_chr8_+_22078622_22078810	0.000819219	SOX2.p2	AB209590|BMP1|649|bone morphogenetic protein 1	BC002593|BMP1|649|bone morphogenetic protein 1	BC009305|BMP1|649|bone morphogenetic protein 1	BC032105|BMP1|649|bone morphogenetic protein 1	BC044626|BMP1|649|bone morphogenetic protein 1	BC142953|BMP1|649|bone morphogenetic protein 1	AK291620|BMP1|649|bone morphogenetic protein 1	BC136679|BMP1|649|bone morphogenetic protein 1	BC144365|BMP1|649|bone morphogenetic protein 1	BC144366|BMP1|649|bone morphogenetic protein 1	BC101763|BMP1|649|bone morphogenetic protein 1	BC101765|BMP1|649|bone morphogenetic protein 1	BC143338|BMP1|649|bone morphogenetic protein 1
hg18_v1_chr17_-_45621312_45621316	0.000818706	SOX2.p2	J00111|COL1A1|1277|collagen, type I, alpha 1
hg18_v1_chr16_-_128258_128651	0.000798425	SOX2.p2	AK298795|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)	BC004185|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)	BC012825|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)	AK300736|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)	BC020392|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)	NM_001039476|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)
hg18_v1_chr7_+_137795719_137795833	0.000795463	SOX2.p2	AF119042|TRIM24|8805|tripartite motif containing 24	BC028689|TRIM24|8805|tripartite motif containing 24	AF009353|TRIM24|8805|tripartite motif containing 24
hg18_v1_chr12_+_132217285_132217286	0.000778255	SOX2.p2	AK314784|ZNF10|7556|zinc finger protein 10	BC024182|ZNF10|7556|zinc finger protein 10	NM_015394|ZNF10|7556|zinc finger protein 10
hg18_v1_chr15_+_20507195_20507195	0.0007693	SOX2.p2	AK127094|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1	AY763579|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1	NM_001033028|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1
hg18_v1_chr12_+_54498129_54498146	0.000745632	SOX2.p2	AK223180|ORMDL2|29095|ORM1-like 2 (S. cerevisiae)
hg18_v1_chr15_+_43666867_43666932	0.000744367	SOX2.p2	AK057545|PLDN|26258|pallidin homolog (mouse)	BC004819|PLDN|26258|pallidin homolog (mouse)	AK315581|PLDN|26258|pallidin homolog (mouse)
hg18_v1_chr15_-_81006240_81006342	0.000734823	SOX2.p2	BC009407|RPS17|6218|ribosomal protein S17	BC020453|RPS17|6218|ribosomal protein S17	BC019899|RPS17|6218|ribosomal protein S17	CR618357|RPS17|6218|ribosomal protein S17	BC071928|RPS17|6218|ribosomal protein S17	M13932|RPS17|6218|ribosomal protein S17	AK311951|RPS17|6218|ribosomal protein S17	BC070222|RPS17|6218|ribosomal protein S17	BC022370|RPS17|6218|ribosomal protein S17	NM_001021|RPS17|6218|ribosomal protein S17	BC062715|RPS17|6218|ribosomal protein S17
hg18_v1_chr19_+_10625896_10625985	0.000708588	SOX2.p2	NM_001137673|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	NM_004516|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	NM_012218|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	NM_017620|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	NM_153464|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	AB209062|ILF3|3609|interleukin enhancer binding factor 3, 90kDa
hg18_v1_chr12_-_3732614_3732672	0.000699291	SOX2.p2	AK057608|EFCAB4B|84766|EF-hand calcium binding domain 4B	NM_001144958|EFCAB4B|84766|EF-hand calcium binding domain 4B	NM_001144959|EFCAB4B|84766|EF-hand calcium binding domain 4B	NM_032680|EFCAB4B|84766|EF-hand calcium binding domain 4B
hg18_v1_chrX_+_46191567_46191744	0.000693206	SOX2.p2	NM_001129898|ZNF673|55634|zinc finger family member 673	NM_001129899|ZNF673|55634|zinc finger family member 673	NM_001129900|ZNF673|55634|zinc finger family member 673	NM_017776|ZNF673|55634|zinc finger family member 673	AK289703|ZNF673|55634|zinc finger family member 673	AK096413|ZNF673|55634|zinc finger family member 673	AK000351|ZNF673|55634|zinc finger family member 673
hg18_v1_chr14_-_49652944_49653097	0.000684331	SOX2.p2	AK129564|METTL21D|79609|methyltransferase like 21D	CR597030|METTL21D|79609|methyltransferase like 21D	BX247997|METTL21D|79609|methyltransferase like 21D	BC027585|METTL21D|79609|methyltransferase like 21D	AK023982|METTL21D|79609|methyltransferase like 21D	NM_001040662|METTL21D|79609|methyltransferase like 21D	NM_024558|METTL21D|79609|methyltransferase like 21D	BC105118|METTL21D|79609|methyltransferase like 21D	BC143673|METTL21D|79609|methyltransferase like 21D	BC143674|METTL21D|79609|methyltransferase like 21D
hg18_v1_chr5_+_31229609_31229659	0.000655055	SOX2.p2	BC000019|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)
hg18_v1_chr15_+_72006015_72006173	0.000643152	SOX2.p2	DQ893331|LOXL1|4016|lysyl oxidase-like 1
hg18_v1_chr4_+_100704262_100704262	0.000642553	SOX2.p2	AK302602|MTTP|4547|microsomal triglyceride transfer protein	NM_000253|MTTP|4547|microsomal triglyceride transfer protein
hg18_v1_chr13_-_51922731_51922806	0.000614419	SOX2.p2	AF151903|VPS36|51028|vacuolar protein sorting 36 homolog (S. cerevisiae)	BC050439|VPS36|51028|vacuolar protein sorting 36 homolog (S. cerevisiae)	BC037279|VPS36|51028|vacuolar protein sorting 36 homolog (S. cerevisiae)	AK289740|VPS36|51028|vacuolar protein sorting 36 homolog (S. cerevisiae)	NM_016075|VPS36|51028|vacuolar protein sorting 36 homolog (S. cerevisiae)
hg18_v1_chr8_+_10567556_10567580	0.000600046	SOX2.p2	BC065837|C8orf74|203076|chromosome 8 open reading frame 74	BC132852|C8orf74|203076|chromosome 8 open reading frame 74	BC132854|C8orf74|203076|chromosome 8 open reading frame 74	NM_001040032|C8orf74|203076|chromosome 8 open reading frame 74	AK131443|C8orf74|203076|chromosome 8 open reading frame 74	BC038534|C8orf74|203076|chromosome 8 open reading frame 74
hg18_v1_chr22_-_49363209_49363371	0.000598962	SOX2.p2	BC143071|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)	BC150318|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)	D87812|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)	U62733|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)	BC142954|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)	NM_001145137|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)
hg18_v1_chr7_+_138676436_138676436	0.000596008	SOX2.p2	NM_197964|C7orf55|154791|chromosome 7 open reading frame 55
hg18_v1_chr17_-_26672757_26672892	0.000594888	SOX2.p2	BC035572|EVI2A|2123|ecotropic viral integration site 2A	CR590095|EVI2A|2123|ecotropic viral integration site 2A	AK295311|EVI2A|2123|ecotropic viral integration site 2A	AK312348|EVI2A|2123|ecotropic viral integration site 2A	NM_001003927|EVI2A|2123|ecotropic viral integration site 2A	NM_014210|EVI2A|2123|ecotropic viral integration site 2A
hg18_v1_chr16_-_30453499_30453504	0.000564198	SOX2.p2	AK292192|ZNF747|65988|zinc finger protein 747
hg18_v1_chr14_-_44673418_44673495	0.000559598	SOX2.p2	CR590899|FKBP3|2287|FK506 binding protein 3, 25kDa	AK311915|FKBP3|2287|FK506 binding protein 3, 25kDa	BC020809|FKBP3|2287|FK506 binding protein 3, 25kDa	AK222993|FKBP3|2287|FK506 binding protein 3, 25kDa	M96256|FKBP3|2287|FK506 binding protein 3, 25kDa	NM_002013|FKBP3|2287|FK506 binding protein 3, 25kDa
hg18_v1_chr12_-_110378240_110378372	0.000544865	SOX2.p2	
hg18_v1_chr5_-_149772528_149772551	0.000519885	SOX2.p2	
hg18_v1_chr17_+_25730086_25730098	0.000494444	SOX2.p2	D85390|CPD|1362|carboxypeptidase D	BC045624|CPD|1362|carboxypeptidase D
hg18_v1_chr5_+_137716285_137716383	0.000463424	SOX2.p2	BC146788|KDM3B|51780|lysine (K)-specific demethylase 3B	AB029005|KDM3B|51780|lysine (K)-specific demethylase 3B
hg18_v1_chr18_-_72336133_72336154	0.000462575	SOX2.p2	D86975|ZNF516|9658|zinc finger protein 516	NM_014643|ZNF516|9658|zinc finger protein 516
hg18_v1_chr2_-_65210695_65210752	0.00045583	SOX2.p2	BC000905|RAB1A|5861|RAB1A, member RAS oncogene family	BX571747|RAB1A|5861|RAB1A, member RAS oncogene family	AL050268|RAB1A|5861|RAB1A, member RAS oncogene family	AK303678|RAB1A|5861|RAB1A, member RAS oncogene family	AK055927|RAB1A|5861|RAB1A, member RAS oncogene family	CR616184|RAB1A|5861|RAB1A, member RAS oncogene family	AK315495|RAB1A|5861|RAB1A, member RAS oncogene family
hg18_v1_chr19_-_14490227_14490233	0.000451486	SOX2.p2	AK312624|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1
hg18_v1_chr3_+_101694244_101694302	0.000450314	SOX2.p2	AK129789|TMEM45A|55076|transmembrane protein 45A
hg18_v1_chr5_+_96296842_96296856	0.000444972	SOX2.p2	AK096804|LNPEP|4012|leucyl/cystinyl aminopeptidase
hg18_v1_chr19_-_11477689_11477754	0.000441042	SOX2.p2	AK131037|ZNF653|115950|zinc finger protein 653	NM_138783|ZNF653|115950|zinc finger protein 653
hg18_v1_chr3_-_63984134_63984246	0.000406371	SOX2.p2	AF530062|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	CR591954|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	CR593438|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	CR606536|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	CR609059|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	BC000630|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	AK095059|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	AY568086|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	D14663|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	NM_014814|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	CR591399|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	CR614166|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	BC012369|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	BC000904|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	CR602355|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	AK290205|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	BX647742|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	AF215935|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	CR591251|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6
hg18_v1_chr17_-_37422656_37422708	0.000396491	SOX2.p2	AK298860|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7	AK308016|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7	NM_001144766|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7
hg18_v1_chr22_-_16637238_16637430	0.000386994	SOX2.p2	CR600376|BID|637|BH3 interacting domain death agonist	BC022072|BID|637|BH3 interacting domain death agonist	NM_001196|BID|637|BH3 interacting domain death agonist	NM_197967|BID|637|BH3 interacting domain death agonist	CR611157|BID|637|BH3 interacting domain death agonist	EU678293|BID|637|BH3 interacting domain death agonist	EU678294|BID|637|BH3 interacting domain death agonist
hg18_v1_chr5_+_140146059_140146059	0.000376793	SOX2.p2	AF152305|PCDHA1|56147|protocadherin alpha 1	AF152479|PCDHA1|56147|protocadherin alpha 1	AF169695|PCDHA1|56147|protocadherin alpha 1	NM_018900|PCDHA1|56147|protocadherin alpha 1	NM_031410|PCDHA1|56147|protocadherin alpha 1	NM_031411|PCDHA1|56147|protocadherin alpha 1
hg18_v1_chr17_+_58981708_58981781	0.000369928	SOX2.p2	CR606772|DCAF7|10238|DDB1 and CUL4 associated factor 7	DQ891233|DCAF7|10238|DDB1 and CUL4 associated factor 7	DQ894417|DCAF7|10238|DDB1 and CUL4 associated factor 7
hg18_v1_chr16_+_68015990_68016044	0.000369708	SOX2.p2	AB009282|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)	CR610358|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)	NM_030579|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)	CR605284|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)	BX647922|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)	CR621814|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)	CR622662|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)	CR625442|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)	CR623816|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)	BC014431|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)
hg18_v1_chr17_-_76827370_76827467	0.000365251	SOX2.p2	AK128728|C17orf56|146705|chromosome 17 open reading frame 56	BC064483|C17orf56|146705|chromosome 17 open reading frame 56	BC042155|C17orf56|146705|chromosome 17 open reading frame 56	AK056090|C17orf56|146705|chromosome 17 open reading frame 56
hg18_v1_chr20_+_9146036_9146081	0.000354996	SOX2.p2	NM_182797|PLCB4|5332|phospholipase C, beta 4	BC117458|PLCB4|5332|phospholipase C, beta 4	BC143868|PLCB4|5332|phospholipase C, beta 4
hg18_v1_chr3_-_102714663_102714774	0.000352246	SOX2.p2	AM392620|SENP7|57337|SUMO1/sentrin specific peptidase 7	AM393440|SENP7|57337|SUMO1/sentrin specific peptidase 7	AK297356|SENP7|57337|SUMO1/sentrin specific peptidase 7	BC129988|SENP7|57337|SUMO1/sentrin specific peptidase 7	BC062674|SENP7|57337|SUMO1/sentrin specific peptidase 7	BX537943|SENP7|57337|SUMO1/sentrin specific peptidase 7	AL833577|SENP7|57337|SUMO1/sentrin specific peptidase 7	AF199458|SENP7|57337|SUMO1/sentrin specific peptidase 7	NM_001077203|SENP7|57337|SUMO1/sentrin specific peptidase 7	NM_020654|SENP7|57337|SUMO1/sentrin specific peptidase 7
hg18_v1_chr6_+_123152044_123152189	0.000349937	SOX2.p2	CR620022|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A	AK000184|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A	BC018999|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A	BC066591|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A	AK301365|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A	DQ892207|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A	DQ895402|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A
hg18_v1_chr13_-_29322671_29322734	0.000324002	SOX2.p2	AK056580|UBL3|5412|ubiquitin-like 3
hg18_v1_chr12_-_9913724_9913724	0.000323774	SOX2.p2	NM_005127|CLEC2B|9976|C-type lectin domain family 2, member B
hg18_v1_chr3_+_10043097_10043121	0.000316217	SOX2.p2	AK307512|FANCD2|2177|Fanconi anemia, complementation group D2	NM_001018115|FANCD2|2177|Fanconi anemia, complementation group D2	NM_033084|FANCD2|2177|Fanconi anemia, complementation group D2
hg18_v1_chr7_+_55400890_55401255	0.000299993	SOX2.p2	AK313326|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	BC070049|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	AK225958|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	AJ278245|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	AB035966|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	AF353942|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	AK301747|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	AL713665|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	CR620619|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	CR619072|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)
hg18_v1_chr11_-_118167065_118167065	0.000299182	SOX2.p2	BC039826|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
hg18_v1_chr5_-_49772973_49773028	0.000289007	SOX2.p2	NM_198449|EMB|133418|embigin
hg18_v1_chr17_+_37957509_37957509	0.000276755	SOX2.p2	NM_000413|HSD17B1|3292|hydroxysteroid (17-beta) dehydrogenase 1
hg18_v1_chr2_+_241023703_241023804	0.000271763	SOX2.p2	BC051279|GPC1|2817|glypican 1	NM_002081|GPC1|2817|glypican 1	X54232|GPC1|2817|glypican 1
hg18_v1_chr6_-_47385604_47385604	0.000259854	SOX2.p2	AK315560|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg18_v1_chr2_-_206732348_206732447	0.000257441	SOX2.p2	X61100|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	AK098395|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	BC018900|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	BC022368|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	AK300585|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	BC030833|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	AK295705|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	AK295966|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	AK298320|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	BC004133|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	NM_005006|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)
hg18_v1_chr5_-_176258920_176258938	0.000207172	SOX2.p2	U51333|HK3|3101|hexokinase 3 (white cell)	BC028129|HK3|3101|hexokinase 3 (white cell)	NM_002115|HK3|3101|hexokinase 3 (white cell)
hg18_v1_chrX_-_101613387_101613417	0.000198331	SOX2.p2	AK057385|NXF2|56001|nuclear RNA export factor 2	AK093310|NXF2|56001|nuclear RNA export factor 2	BX647232|NXF2|56001|nuclear RNA export factor 2	NM_001099686|NXF2B|728343|nuclear RNA export factor 2B	NM_017809|NXF2|56001|nuclear RNA export factor 2	AK303069|NXF2B|728343|nuclear RNA export factor 2B
hg18_v1_chr16_-_47872880_47872908	0.000197207	SOX2.p2	
hg18_v1_chr1_+_149405128_149405257	0.000192101	SOX2.p2	AK301644|SCNM1|79005|sodium channel modifier 1	NM_024041|SCNM1|79005|sodium channel modifier 1	CR607615|SCNM1|79005|sodium channel modifier 1	AK056322|SCNM1|79005|sodium channel modifier 1	BC000264|SCNM1|79005|sodium channel modifier 1	DQ892531|SCNM1|79005|sodium channel modifier 1	DQ895742|SCNM1|79005|sodium channel modifier 1	CR620396|SCNM1|79005|sodium channel modifier 1
hg18_v1_chr16_+_65195435_65195560	0.000162147	SOX2.p2	AK056324|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3
hg18_v1_chr8_+_144366442_144366517	0.000156163	SOX2.p2	AY245915|GPIHBP1|338328|glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1	BC035810|GPIHBP1|338328|glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1	NM_178172|GPIHBP1|338328|glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1	BC063857|GPIHBP1|338328|glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1
hg18_v1_chr8_-_133756943_133757076	0.000146137	SOX2.p2	BC027589|LRRC6|23639|leucine rich repeat containing 6	BC047286|LRRC6|23639|leucine rich repeat containing 6	NM_012472|LRRC6|23639|leucine rich repeat containing 6	AK313107|LRRC6|23639|leucine rich repeat containing 6
hg18_v1_chr14_+_61231795_61232091	0.000137966	SOX2.p2	NM_001530|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	NM_181054|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	AK296876|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	AK304436|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	AK299551|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	AK304315|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	BX648795|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	BC012527|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	U29165|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	AK312397|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)
hg18_v1_chr14_+_90650109_90650208	0.000133211	SOX2.p2	NM_001102366|C14orf159|80017|chromosome 14 open reading frame 159	NM_001102368|C14orf159|80017|chromosome 14 open reading frame 159	NM_001102369|C14orf159|80017|chromosome 14 open reading frame 159	NM_024952|C14orf159|80017|chromosome 14 open reading frame 159	AK097294|C14orf159|80017|chromosome 14 open reading frame 159	AK098752|C14orf159|80017|chromosome 14 open reading frame 159	BX537970|C14orf159|80017|chromosome 14 open reading frame 159	BX161393|C14orf159|80017|chromosome 14 open reading frame 159	BX247989|C14orf159|80017|chromosome 14 open reading frame 159	BC009182|C14orf159|80017|chromosome 14 open reading frame 159	AK308857|C14orf159|80017|chromosome 14 open reading frame 159	AB210031|C14orf159|80017|chromosome 14 open reading frame 159
hg18_v1_chr20_+_34667605_34667622	0.000131924	SOX2.p2	CR611434|C20orf24|55969|chromosome 20 open reading frame 24
hg18_v1_chr7_+_148475373_148475551	0.000123841	SOX2.p2	AK026380|ZNF398|57541|zinc finger protein 398	NM_170686|ZNF398|57541|zinc finger protein 398	BC043295|ZNF398|57541|zinc finger protein 398	AK290499|ZNF398|57541|zinc finger protein 398
hg18_v1_chr3_-_95264349_95264520	0.000123576	SOX2.p2	BC045541|DHFRL1|200895|dihydrofolate reductase-like 1	AL832912|DHFRL1|200895|dihydrofolate reductase-like 1	BC063379|DHFRL1|200895|dihydrofolate reductase-like 1	NM_176815|DHFRL1|200895|dihydrofolate reductase-like 1
hg18_v1_chr7_-_136678901_136678916	0.000119642	SOX2.p2	CR596476|PTN|5764|pleiotrophin	AK290488|PTN|5764|pleiotrophin
hg18_v1_chr11_-_116163904_116163939	9.46406e-05	SOX2.p2	CR621542|ZNF259|8882|zinc finger protein 259	AK301227|ZNF259|8882|zinc finger protein 259	CR622469|ZNF259|8882|zinc finger protein 259	BT006642|ZNF259|8882|zinc finger protein 259	CR594434|ZNF259|8882|zinc finger protein 259	BC004256|ZNF259|8882|zinc finger protein 259	BC011929|ZNF259|8882|zinc finger protein 259	CR626297|ZNF259|8882|zinc finger protein 259	BC012162|ZNF259|8882|zinc finger protein 259	BC017380|ZNF259|8882|zinc finger protein 259	AF019767|ZNF259|8882|zinc finger protein 259	BC111028|ZNF259|8882|zinc finger protein 259
hg18_v1_chr6_-_74286876_74286906	8.85697e-05	SOX2.p2	AY043301|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1
hg18_v1_chr1_-_242681860_242682062	7.51736e-05	SOX2.p2	AK308749|ADSS|159|adenylosuccinate synthase	NM_001126|ADSS|159|adenylosuccinate synthase
hg18_v1_chr1_-_1667123_1667353	6.68415e-05	SOX2.p2	BC062371|SLC35E2|9906|solute carrier family 35, member E2	CR591109|SLC35E2|9906|solute carrier family 35, member E2	AL049665|SLC35E2|9906|solute carrier family 35, member E2	NM_182838|SLC35E2|9906|solute carrier family 35, member E2	BC110653|SLC35E2B|728661|solute carrier family 35, member E2B
hg18_v1_chr10_-_14856901_14856901	6.47311e-05	SOX2.p2	AK127413|FAM107B|83641|family with sequence similarity 107, member B	NM_031453|FAM107B|83641|family with sequence similarity 107, member B
hg18_v1_chr5_-_11957127_11957242	5.97752e-05	SOX2.p2	AK296232|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)
hg18_v1_chr3_+_73128629_73128665	2.19417e-05	SOX2.p2	AK289901|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2	BC100281|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2
hg18_v1_chr9_+_70840298_70840298	1.98359e-05	SOX2.p2	NM_000144|FXN|2395|frataxin	NM_001161706|FXN|2395|frataxin	NM_181425|FXN|2395|frataxin
hg18_v1_chr6_+_34312641_34312657	1.72489e-05	SOX2.p2	X14957|HMGA1|3159|high mobility group AT-hook 1	X14958|HMGA1|3159|high mobility group AT-hook 1	CR614979|HMGA1|3159|high mobility group AT-hook 1	AK308245|HMGA1|3159|high mobility group AT-hook 1
hg18_v1_chr14_+_64948332_64948414	5.73344e-06	SOX2.p2	BC142958|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	AK292413|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	AK294242|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	Y17976|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	Y17977|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)
hg18_v1_chr2_-_190357320_190357367	4.62507e-06	SOX2.p2	AK074756|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)	NM_001128150|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)	NM_016467|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)
