hg18_v1_chr5_-_88155360_88155499	3.01353	LHX3,4.p2	EU446634|MEF2C|4208|myocyte enhancer factor 2C	EU832832|MEF2C|4208|myocyte enhancer factor 2C	FM163484|MEF2C|4208|myocyte enhancer factor 2C	FM180475|MEF2C|4208|myocyte enhancer factor 2C	GQ129219|MEF2C|4208|myocyte enhancer factor 2C	GQ129221|MEF2C|4208|myocyte enhancer factor 2C	GQ129392|MEF2C|4208|myocyte enhancer factor 2C	GQ129393|MEF2C|4208|myocyte enhancer factor 2C	NM_001193348|MEF2C|4208|myocyte enhancer factor 2C	NM_001193349|MEF2C|4208|myocyte enhancer factor 2C
hg18_v1_chr19_-_56612653_56612868	2.86136	LHX3,4.p2	AK289900|SIGLEC10|89790|sialic acid binding Ig-like lectin 10	AF310233|SIGLEC10|89790|sialic acid binding Ig-like lectin 10	AY358337|SIGLEC10|89790|sialic acid binding Ig-like lectin 10	AK290542|SIGLEC10|89790|sialic acid binding Ig-like lectin 10	AK294185|SIGLEC10|89790|sialic acid binding Ig-like lectin 10	AK303514|SIGLEC10|89790|sialic acid binding Ig-like lectin 10	AK303717|SIGLEC10|89790|sialic acid binding Ig-like lectin 10	BC101725|SIGLEC10|89790|sialic acid binding Ig-like lectin 10	BC143497|SIGLEC10|89790|sialic acid binding Ig-like lectin 10	BC143500|SIGLEC10|89790|sialic acid binding Ig-like lectin 10	AF301007|SIGLEC10|89790|sialic acid binding Ig-like lectin 10	AK292025|SIGLEC10|89790|sialic acid binding Ig-like lectin 10	AK308982|SIGLEC10|89790|sialic acid binding Ig-like lectin 10	AY032685|SIGLEC10|89790|sialic acid binding Ig-like lectin 10	AF311905|SIGLEC10|89790|sialic acid binding Ig-like lectin 10	NM_001171156|SIGLEC10|89790|sialic acid binding Ig-like lectin 10	NM_001171157|SIGLEC10|89790|sialic acid binding Ig-like lectin 10	NM_001171158|SIGLEC10|89790|sialic acid binding Ig-like lectin 10	NM_001171159|SIGLEC10|89790|sialic acid binding Ig-like lectin 10	NM_001171160|SIGLEC10|89790|sialic acid binding Ig-like lectin 10	NM_001171161|SIGLEC10|89790|sialic acid binding Ig-like lectin 10	NM_033130|SIGLEC10|89790|sialic acid binding Ig-like lectin 10
hg18_v1_chr17_+_19917420_19917568	1.93768	LHX3,4.p2	AK314341|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1
hg18_v1_chr1_+_117345894_117345962	1.64557	LHX3,4.p2	AK307542|CD101|9398|CD101 molecule	NM_004258|CD101|9398|CD101 molecule	AK298237|CD101|9398|CD101 molecule	BC130327|CD101|9398|CD101 molecule	BC136484|CD101|9398|CD101 molecule	BC171768|CD101|9398|CD101 molecule	Z33642|CD101|9398|CD101 molecule
hg18_v1_chr12_+_52696908_52696981	1.47698	LHX3,4.p2	NM_014620|HOXC4|3221|homeobox C4	NM_153693|HOXC6|3223|homeobox C6	X07495|HOXC4|3221|homeobox C4
hg18_v1_chr12_+_52697160_52697223	1.39911	LHX3,4.p2	BC034922|HOXC5|3222|homeobox C5	BC044635|HOXC5|3222|homeobox C5	M16938|HOXC6|3223|homeobox C6	AK314829|HOXC6|3223|homeobox C6
hg18_v1_chr1_+_196874839_196874857	1.27294	LHX3,4.p2	AK307635|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	AK130573|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	AK292131|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	AK299986|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	AK303539|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	BC017863|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	Y00638|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	BC014239|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	BC031525|PTPRC|5788|protein tyrosine phosphatase, receptor type, C
hg18_v1_chr3_-_57209319_57209319	1.23099	LHX3,4.p2	NM_003865|HESX1|8820|HESX homeobox 1
hg18_v1_chr12_-_101396459_101396558	1.21011	LHX3,4.p2	M37484|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	NM_001111284|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg18_v1_chr5_+_67622242_67622383	1.14151	LHX3,4.p2	AK223613|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	BC030815|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	NM_181504|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	U49349|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	AK126345|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
hg18_v1_chr13_-_83354425_83354428	1.05371	LHX3,4.p2	BC051738|SLITRK1|114798|SLIT and NTRK-like family, member 1
hg18_v1_chr5_+_156628929_156628939	1.04801	LHX3,4.p2	BC011762|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	BC021008|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	NM_014376|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2
hg18_v1_chr16_+_11966464_11966707	1.02726	LHX3,4.p2	NM_001192|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17	Z29575|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17	EF152354|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17	BC058291|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17	EF152355|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17	AY684975|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17	Z14954|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17	EF152353|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17	EF152356|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17
hg18_v1_chr10_-_50066386_50066479	1.00758	LHX3,4.p2	DQ884399|C10orf128|170371|chromosome 10 open reading frame 128	BC047724|C10orf128|170371|chromosome 10 open reading frame 128	BC104438|C10orf128|170371|chromosome 10 open reading frame 128	BC104439|C10orf128|170371|chromosome 10 open reading frame 128	NM_001010863|C10orf128|170371|chromosome 10 open reading frame 128	CR624206|C10orf128|170371|chromosome 10 open reading frame 128	CR618023|C10orf128|170371|chromosome 10 open reading frame 128	CR607332|C10orf128|170371|chromosome 10 open reading frame 128	BC037922|C10orf128|170371|chromosome 10 open reading frame 128	BC042857|C10orf128|170371|chromosome 10 open reading frame 128
hg18_v1_chr7_+_90177082_90177111	0.97586	LHX3,4.p2	AK295086|CDK14|5218|cyclin-dependent kinase 14	AK296406|CDK14|5218|cyclin-dependent kinase 14	AK307484|CDK14|5218|cyclin-dependent kinase 14	AK316026|CDK14|5218|cyclin-dependent kinase 14
hg18_v1_chr7_+_37689903_37689911	0.968874	LHX3,4.p2	
hg18_v1_chr22_+_38627031_38627109	0.958906	LHX3,4.p2	AY069959|GRAP2|9402|GRB2-related adaptor protein 2	NM_004810|GRAP2|9402|GRB2-related adaptor protein 2	AK303332|GRAP2|9402|GRB2-related adaptor protein 2	AK303512|GRAP2|9402|GRB2-related adaptor protein 2	AF236119|GRAP2|9402|GRB2-related adaptor protein 2	CR604186|GRAP2|9402|GRB2-related adaptor protein 2	AJ011736|GRAP2|9402|GRB2-related adaptor protein 2	BC025692|GRAP2|9402|GRB2-related adaptor protein 2	AF042380|GRAP2|9402|GRB2-related adaptor protein 2	AF102694|GRAP2|9402|GRB2-related adaptor protein 2
hg18_v1_chr10_+_35466715_35466769	0.957176	LHX3,4.p2	NM_183011|CREM|1390|cAMP responsive element modulator	NM_183012|CREM|1390|cAMP responsive element modulator
hg18_v1_chr12_+_52708460_52708572	0.944151	LHX3,4.p2	NM_004503|HOXC6|3223|homeobox C6	S82986|HOXC6|3223|homeobox C6	BC074844|HOXC6|3223|homeobox C6	BC074845|HOXC6|3223|homeobox C6	CR456954|HOXC6|3223|homeobox C6
hg18_v1_chr3_+_63928459_63928536	0.939418	LHX3,4.p2	NM_001128149|ATXN7|6314|ataxin 7	AK310745|ATXN7|6314|ataxin 7	AK304062|ATXN7|6314|ataxin 7
hg18_v1_chr12_-_10173947_10174134	0.937985	LHX3,4.p2	AF400595|CLEC7A|64581|C-type lectin domain family 7, member A	AF400596|CLEC7A|64581|C-type lectin domain family 7, member A	AF400597|CLEC7A|64581|C-type lectin domain family 7, member A	AF400598|CLEC7A|64581|C-type lectin domain family 7, member A	AF400599|CLEC7A|64581|C-type lectin domain family 7, member A	AF400600|CLEC7A|64581|C-type lectin domain family 7, member A	AF400601|CLEC7A|64581|C-type lectin domain family 7, member A	AF400602|CLEC7A|64581|C-type lectin domain family 7, member A	AY026769|CLEC7A|64581|C-type lectin domain family 7, member A	AY026770|CLEC7A|64581|C-type lectin domain family 7, member A	AY026771|CLEC7A|64581|C-type lectin domain family 7, member A	AF313469|CLEC7A|64581|C-type lectin domain family 7, member A	BC013385|CLEC7A|64581|C-type lectin domain family 7, member A	AY009090|CLEC7A|64581|C-type lectin domain family 7, member A	AK297028|CLEC7A|64581|C-type lectin domain family 7, member A	BC093829|CLEC7A|64581|C-type lectin domain family 7, member A	BC093831|CLEC7A|64581|C-type lectin domain family 7, member A	BC071746|CLEC7A|64581|C-type lectin domain family 7, member A	AK298679|CLEC7A|64581|C-type lectin domain family 7, member A	AK298724|CLEC7A|64581|C-type lectin domain family 7, member A	AK313247|CLEC7A|64581|C-type lectin domain family 7, member A	CR749536|CLEC7A|64581|C-type lectin domain family 7, member A	AK295108|CLEC7A|64581|C-type lectin domain family 7, member A	AF313468|CLEC7A|64581|C-type lectin domain family 7, member A	AJ312372|CLEC7A|64581|C-type lectin domain family 7, member A	AJ312373|CLEC7A|64581|C-type lectin domain family 7, member A	AY359002|CLEC7A|64581|C-type lectin domain family 7, member A	AK294111|CLEC7A|64581|C-type lectin domain family 7, member A	NM_022570|CLEC7A|64581|C-type lectin domain family 7, member A	NM_197947|CLEC7A|64581|C-type lectin domain family 7, member A	NM_197948|CLEC7A|64581|C-type lectin domain family 7, member A	NM_197949|CLEC7A|64581|C-type lectin domain family 7, member A	NM_197950|CLEC7A|64581|C-type lectin domain family 7, member A	NM_197954|CLEC7A|64581|C-type lectin domain family 7, member A
hg18_v1_chr22_+_38627129_38627258	0.930912	LHX3,4.p2	AF129476|GRAP2|9402|GRB2-related adaptor protein 2	AF090456|GRAP2|9402|GRB2-related adaptor protein 2	CR456498|GRAP2|9402|GRB2-related adaptor protein 2	Y18051|GRAP2|9402|GRB2-related adaptor protein 2
hg18_v1_chr10_+_91488704_91488791	0.925633	LHX3,4.p2	AK025628|KIF20B|9585|kinesin family member 20B
hg18_v1_chr1_-_114215768_114215897	0.921065	LHX3,4.p2	AF001846|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	GU479452|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	AF150732|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	AF077031|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	BC071670|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	AK303124|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	AK310570|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	AK310698|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	BC017785|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	NM_001193431|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	NM_012411|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	NM_015967|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)
hg18_v1_chr9_-_205892_205892	0.905504	LHX3,4.p2	NM_152569|C9orf66|157983|chromosome 9 open reading frame 66
hg18_v1_chr20_-_51633042_51633042	0.904763	LHX3,4.p2	AF041259|ZNF217|7764|zinc finger protein 217	NM_006526|ZNF217|7764|zinc finger protein 217
hg18_v1_chr13_-_98708549_98708682	0.897589	LHX3,4.p2	AF261135|GPR18|2841|G protein-coupled receptor 18	BC050646|GPR18|2841|G protein-coupled receptor 18	AF339781|GPR18|2841|G protein-coupled receptor 18	BC008569|GPR18|2841|G protein-coupled receptor 18	NM_001098200|GPR18|2841|G protein-coupled receptor 18	NM_005292|GPR18|2841|G protein-coupled receptor 18
hg18_v1_chr7_+_128802719_128802719	0.886404	LHX3,4.p2	AK316073|AHCYL2|23382|adenosylhomocysteinase-like 2	NM_001130722|AHCYL2|23382|adenosylhomocysteinase-like 2
hg18_v1_chr8_-_42742729_42742931	0.878123	LHX3,4.p2	Y16282|CHRNA6|8973|cholinergic receptor, nicotinic, alpha 6	BC014456|CHRNA6|8973|cholinergic receptor, nicotinic, alpha 6	NM_004198|CHRNA6|8973|cholinergic receptor, nicotinic, alpha 6	U62435|CHRNA6|8973|cholinergic receptor, nicotinic, alpha 6	AK298798|CHRNA6|8973|cholinergic receptor, nicotinic, alpha 6	AK313521|CHRNA6|8973|cholinergic receptor, nicotinic, alpha 6
hg18_v1_chr2_-_215711313_215711395	0.860299	LHX3,4.p2	BC144073|ABCA12|26154|ATP-binding cassette, sub-family A (ABC1), member 12	AY219711|ABCA12|26154|ATP-binding cassette, sub-family A (ABC1), member 12	NM_173076|ABCA12|26154|ATP-binding cassette, sub-family A (ABC1), member 12
hg18_v1_chr6_+_152053323_152053425	0.832981	LHX3,4.p2	NM_001122742|ESR1|2099|estrogen receptor 1	U68068|ESR1|2099|estrogen receptor 1	AK309580|ESR1|2099|estrogen receptor 1
hg18_v1_chr2_+_161981138_161981167	0.804295	LHX3,4.p2	U49250|TBR1|10716|T-box, brain, 1
hg18_v1_chr19_-_53841064_53841262	0.795807	LHX3,4.p2	AF067662|CA11|770|carbonic anhydrase XI	AB018195|CA11|770|carbonic anhydrase XI	AY358967|CA11|770|carbonic anhydrase XI	NM_001217|CA11|770|carbonic anhydrase XI
hg18_v1_chr3_-_143230124_143230196	0.775388	LHX3,4.p2	AK303634|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	U18422|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	BC007976|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	AK303181|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	NM_001178141|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	NM_001178142|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	NM_006286|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)
hg18_v1_chr5_-_22889192_22889215	0.746721	LHX3,4.p2	BC047608|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)
hg18_v1_chrX_+_70682204_70682291	0.741933	LHX3,4.p2	AL050366|OGT|8473|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)
hg18_v1_chr3_+_46386636_46386636	0.73817	LHX3,4.p2	NM_000579|CCR5|1234|chemokine (C-C motif) receptor 5	NM_001100168|CCR5|1234|chemokine (C-C motif) receptor 5
hg18_v1_chr3_+_123385219_123385219	0.736312	LHX3,4.p2	NM_000388|CASR|846|calcium-sensing receptor	U20759|CASR|846|calcium-sensing receptor
hg18_v1_chr1_-_158815895_158815929	0.707289	LHX3,4.p2	AK313496|CD84|8832|CD84 molecule	AF054815|CD84|8832|CD84 molecule	AF054816|CD84|8832|CD84 molecule	AF054817|CD84|8832|CD84 molecule	AF054818|CD84|8832|CD84 molecule	U96627|CD84|8832|CD84 molecule	Y12632|CD84|8832|CD84 molecule	NM_001184879|CD84|8832|CD84 molecule	NM_001184881|CD84|8832|CD84 molecule	NM_001184882|CD84|8832|CD84 molecule	NM_003874|CD84|8832|CD84 molecule
hg18_v1_chr18_+_59767567_59767567	0.702358	LHX3,4.p2	NM_001123366|HMSD|284293|histocompatibility (minor) serpin domain containing
hg18_v1_chr19_+_14554895_14554934	0.701595	LHX3,4.p2	NM_207390|CLEC17A|388512|C-type lectin domain family 17, member A	BC140848|CLEC17A|388512|C-type lectin domain family 17, member A	BC144664|CLEC17A|388512|C-type lectin domain family 17, member A	BC144665|CLEC17A|388512|C-type lectin domain family 17, member A
hg18_v1_chr2_+_161981046_161981089	0.683438	LHX3,4.p2	AK297438|TBR1|10716|T-box, brain, 1	AK312567|TBR1|10716|T-box, brain, 1	AK226050|TBR1|10716|T-box, brain, 1	BC029289|TBR1|10716|T-box, brain, 1
hg18_v1_chr3_+_179759181_179759311	0.681427	LHX3,4.p2	AF209747|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2	NM_005832|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2
hg18_v1_chr20_+_56919233_56919283	0.678348	LHX3,4.p2	CR609100|GNAS|2778|GNAS complex locus
hg18_v1_chr7_-_13992351_13992663	0.677901	LHX3,4.p2	AK293802|ETV1|2115|ets variant 1	AK311134|ETV1|2115|ets variant 1	AK311194|ETV1|2115|ets variant 1	CR627389|ETV1|2115|ets variant 1	AK294572|ETV1|2115|ets variant 1	AK311707|ETV1|2115|ets variant 1	AK316007|ETV1|2115|ets variant 1	AK299693|ETV1|2115|ets variant 1	NM_001163150|ETV1|2115|ets variant 1	NM_001163151|ETV1|2115|ets variant 1	NM_001163152|ETV1|2115|ets variant 1
hg18_v1_chr13_+_23042722_23042918	0.676968	LHX3,4.p2	BC047321|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19	NM_148957|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19	AK304290|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19	AK292874|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19
hg18_v1_chr4_+_166350620_166350637	0.676211	LHX3,4.p2	NM_001161521|KLHL2|11275|kelch-like 2, Mayven (Drosophila)	NM_001161522|KLHL2|11275|kelch-like 2, Mayven (Drosophila)	AK294103|KLHL2|11275|kelch-like 2, Mayven (Drosophila)	BX647776|KLHL2|11275|kelch-like 2, Mayven (Drosophila)
hg18_v1_chrX_-_10761729_10761729	0.666054	LHX3,4.p2	NM_033290|MID1|4281|midline 1 (Opitz/BBB syndrome)
hg18_v1_chrX_-_13744933_13745092	0.643515	LHX3,4.p2	AM392527|GPM6B|2824|glycoprotein M6B	AM392754|GPM6B|2824|glycoprotein M6B	AM392867|GPM6B|2824|glycoprotein M6B	AM392943|GPM6B|2824|glycoprotein M6B	AM392957|GPM6B|2824|glycoprotein M6B	AM392968|GPM6B|2824|glycoprotein M6B	AM392974|GPM6B|2824|glycoprotein M6B	AM393048|GPM6B|2824|glycoprotein M6B	AM393215|GPM6B|2824|glycoprotein M6B	AM393570|GPM6B|2824|glycoprotein M6B	AM393576|GPM6B|2824|glycoprotein M6B	AM393741|GPM6B|2824|glycoprotein M6B	AM393770|GPM6B|2824|glycoprotein M6B	AM393783|GPM6B|2824|glycoprotein M6B	AM393822|GPM6B|2824|glycoprotein M6B	DQ891541|GPM6B|2824|glycoprotein M6B	DQ894729|GPM6B|2824|glycoprotein M6B	EU832134|GPM6B|2824|glycoprotein M6B	EU832227|GPM6B|2824|glycoprotein M6B	BC008151|GPM6B|2824|glycoprotein M6B
hg18_v1_chr11_+_59979857_59979921	0.640285	LHX3,4.p2	NM_021950|MS4A1|931|membrane-spanning 4-domains, subfamily A, member 1	NM_152866|MS4A1|931|membrane-spanning 4-domains, subfamily A, member 1	AK225630|MS4A1|931|membrane-spanning 4-domains, subfamily A, member 1	AK292168|MS4A1|931|membrane-spanning 4-domains, subfamily A, member 1	AK300025|MS4A1|931|membrane-spanning 4-domains, subfamily A, member 1	AK310118|MS4A1|931|membrane-spanning 4-domains, subfamily A, member 1	BC002807|MS4A1|931|membrane-spanning 4-domains, subfamily A, member 1	X07203|MS4A1|931|membrane-spanning 4-domains, subfamily A, member 1	X12530|MS4A1|931|membrane-spanning 4-domains, subfamily A, member 1
hg18_v1_chr7_-_25234582_25234629	0.623873	LHX3,4.p2	AB040290|NPVF|64111|neuropeptide VF precursor	AF330057|NPVF|64111|neuropeptide VF precursor	AF440392|NPVF|64111|neuropeptide VF precursor	NM_022150|NPVF|64111|neuropeptide VF precursor
hg18_v1_chr12_-_51887266_51887312	0.605145	LHX3,4.p2	M68892|ITGB7|3695|integrin, beta 7	NM_000889|ITGB7|3695|integrin, beta 7	S80335|ITGB7|3695|integrin, beta 7	AK298239|ITGB7|3695|integrin, beta 7	AK301523|ITGB7|3695|integrin, beta 7	AK311703|ITGB7|3695|integrin, beta 7
hg18_v1_chr12_+_9871343_9871383	0.602865	LHX3,4.p2	AF175206|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1	AF175207|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1	AF267244|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1	AF267245|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1	NM_016523|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1	AJ305370|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1	BC096734|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1	BC098166|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1	BC098257|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1	BC098354|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1
hg18_v1_chr13_+_47948586_47948596	0.599492	LHX3,4.p2	AK307125|RB1|5925|retinoblastoma 1
hg18_v1_chr2_-_158008763_158008857	0.59751	LHX3,4.p2	L06633|CYTIP|9595|cytohesin 1 interacting protein	CR611736|CYTIP|9595|cytohesin 1 interacting protein	AF068836|CYTIP|9595|cytohesin 1 interacting protein	BC036449|CYTIP|9595|cytohesin 1 interacting protein	CR594595|CYTIP|9595|cytohesin 1 interacting protein	AK312753|CYTIP|9595|cytohesin 1 interacting protein	NM_004288|CYTIP|9595|cytohesin 1 interacting protein
hg18_v1_chr12_+_15590811_15590877	0.586374	LHX3,4.p2	AK290982|PTPRO|5800|protein tyrosine phosphatase, receptor type, O
hg18_v1_chr3_+_99733432_99733567	0.57803	LHX3,4.p2	AK313375|GPR15|2838|G protein-coupled receptor 15	BC101779|GPR15|2838|G protein-coupled receptor 15	BC101781|GPR15|2838|G protein-coupled receptor 15	BC069437|GPR15|2838|G protein-coupled receptor 15	NM_005290|GPR15|2838|G protein-coupled receptor 15
hg18_v1_chr1_+_173111306_173111306	0.570777	LHX3,4.p2	BC012094|RABGAP1L|9910|RAB GTPase activating protein 1-like	NM_001035230|RABGAP1L|9910|RAB GTPase activating protein 1-like
hg18_v1_chr9_+_124173143_124173184	0.569342	LHX3,4.p2	AK290022|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)	M59979|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)	DQ180740|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)	DQ180741|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)	DQ180742|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)	S36219|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)	S36271|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)	S78220|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)
hg18_v1_chr2_-_207291364_207291364	0.565124	LHX3,4.p2	DQ516347|DYTN|391475|dystrotelin	NM_001093730|DYTN|391475|dystrotelin
hg18_v1_chr1_+_196874867_196875040	0.562506	LHX3,4.p2	BC121086|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	BC121087|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	BC127656|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	BC127657|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	BC148257|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	AY567999|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	AY429565|PTPRC|5788|protein tyrosine phosphatase, receptor type, C
hg18_v1_chr4_-_176970372_176970402	0.557639	LHX3,4.p2	DQ892372|GPM6A|2823|glycoprotein M6A	DQ895581|GPM6A|2823|glycoprotein M6A
hg18_v1_chr9_+_124173049_124173135	0.553919	LHX3,4.p2	NM_000962|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)	NM_080591|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)	BC029840|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)
hg18_v1_chr1_-_149681265_149681306	0.539818	LHX3,4.p2	AB007930|POGZ|23126|pogo transposable element with ZNF domain	NM_207171|POGZ|23126|pogo transposable element with ZNF domain	CR601169|POGZ|23126|pogo transposable element with ZNF domain	CR605563|POGZ|23126|pogo transposable element with ZNF domain
hg18_v1_chr7_-_132371208_132371242	0.539407	LHX3,4.p2	CR596725|EEF1G|1937|eukaryotic translation elongation factor 1 gamma	CR615249|EEF1G|1937|eukaryotic translation elongation factor 1 gamma	CR601494|EEF1G|1937|eukaryotic translation elongation factor 1 gamma
hg18_v1_chr4_+_72423633_72423829	0.538416	LHX3,4.p2	BC030977|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	NM_003759|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AF007216|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AK308038|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4
hg18_v1_chr12_-_51887318_51887360	0.535209	LHX3,4.p2	AK300960|ITGB7|3695|integrin, beta 7
hg18_v1_chr7_+_77307382_77307508	0.52949	LHX3,4.p2	BC022419|PHTF2|57157|putative homeodomain transcription factor 2	NM_001127357|PHTF2|57157|putative homeodomain transcription factor 2	NM_001127359|PHTF2|57157|putative homeodomain transcription factor 2	NM_020432|PHTF2|57157|putative homeodomain transcription factor 2	AL831969|PHTF2|57157|putative homeodomain transcription factor 2	BC127093|PHTF2|57157|putative homeodomain transcription factor 2	BC127094|PHTF2|57157|putative homeodomain transcription factor 2	AM392983|PHTF2|57157|putative homeodomain transcription factor 2	AM393200|PHTF2|57157|putative homeodomain transcription factor 2
hg18_v1_chr2_+_68815416_68815738	0.528636	LHX3,4.p2	NM_001007231|ARHGAP25|9938|Rho GTPase activating protein 25	NM_001166277|ARHGAP25|9938|Rho GTPase activating protein 25	AK297056|ARHGAP25|9938|Rho GTPase activating protein 25	AK310742|ARHGAP25|9938|Rho GTPase activating protein 25	AK290396|ARHGAP25|9938|Rho GTPase activating protein 25
hg18_v1_chr12_-_52281050_52281071	0.517756	LHX3,4.p2	X57197|ATF7|11016|activating transcription factor 7	NM_001130059|ATF7|11016|activating transcription factor 7
hg18_v1_chrX_+_37524190_37524238	0.513693	LHX3,4.p2	NM_000397|CYBB|1536|cytochrome b-245, beta polypeptide	AK289753|CYBB|1536|cytochrome b-245, beta polypeptide	BC032720|CYBB|1536|cytochrome b-245, beta polypeptide
hg18_v1_chr7_+_90176647_90176791	0.511127	LHX3,4.p2	AB020641|CDK14|5218|cyclin-dependent kinase 14	BC152436|CDK14|5218|cyclin-dependent kinase 14	BC167152|CDK14|5218|cyclin-dependent kinase 14	BC167156|CDK14|5218|cyclin-dependent kinase 14	NM_012395|CDK14|5218|cyclin-dependent kinase 14	BC136477|CDK14|5218|cyclin-dependent kinase 14	AK289782|CDK14|5218|cyclin-dependent kinase 14	BC152388|CDK14|5218|cyclin-dependent kinase 14
hg18_v1_chr12_+_8499788_8499951	0.504218	LHX3,4.p2	AK308011|CLEC6A|93978|C-type lectin domain family 6, member A	AY321309|CLEC6A|93978|C-type lectin domain family 6, member A	NM_001007033|CLEC6A|93978|C-type lectin domain family 6, member A	AY365135|CLEC6A|93978|C-type lectin domain family 6, member A	BC132933|CLEC6A|93978|C-type lectin domain family 6, member A	BC132935|CLEC6A|93978|C-type lectin domain family 6, member A
hg18_v1_chr11_-_26550243_26550390	0.503805	LHX3,4.p2	AK128337|MUC15|143662|mucin 15, cell surface associated	AJ417818|MUC15|143662|mucin 15, cell surface associated	AJ507429|MUC15|143662|mucin 15, cell surface associated	BC058007|MUC15|143662|mucin 15, cell surface associated	AY358668|MUC15|143662|mucin 15, cell surface associated	BC020912|MUC15|143662|mucin 15, cell surface associated	NM_001135091|MUC15|143662|mucin 15, cell surface associated	NM_001135092|MUC15|143662|mucin 15, cell surface associated	NM_145650|MUC15|143662|mucin 15, cell surface associated
hg18_v1_chr6_-_32265489_32266108	0.502448	LHX3,4.p2	BT009823|PBX2|5089|pre-B-cell leukemia homeobox 2	BC082261|PBX2|5089|pre-B-cell leukemia homeobox 2	BC003111|PBX2|5089|pre-B-cell leukemia homeobox 2	CR601493|PBX2|5089|pre-B-cell leukemia homeobox 2	NM_002586|PBX2|5089|pre-B-cell leukemia homeobox 2
hg18_v1_chr7_+_94135384_94135392	0.498267	LHX3,4.p2	AF038197|PEG10|23089|paternally expressed 10
hg18_v1_chr7_-_7724762_7724762	0.498075	LHX3,4.p2	BC009868|RPA3|6119|replication protein A3, 14kDa	NM_002947|RPA3|6119|replication protein A3, 14kDa
hg18_v1_chr13_-_83354474_83354528	0.493709	LHX3,4.p2	AB067497|SLITRK1|114798|SLIT and NTRK-like family, member 1	NM_052910|SLITRK1|114798|SLIT and NTRK-like family, member 1
hg18_v1_chr12_+_91620749_91620749	0.493398	LHX3,4.p2	NM_001037671|C12orf74|338809|chromosome 12 open reading frame 74	NM_001178097|C12orf74|338809|chromosome 12 open reading frame 74
hg18_v1_chr3_-_110155237_110155366	0.469502	LHX3,4.p2	AF110003|GUCA1C|9626|guanylate cyclase activator 1C	EU832759|GUCA1C|9626|guanylate cyclase activator 1C	GQ129299|GUCA1C|9626|guanylate cyclase activator 1C	AF110002|GUCA1C|9626|guanylate cyclase activator 1C	BC103993|GUCA1C|9626|guanylate cyclase activator 1C	BC103994|GUCA1C|9626|guanylate cyclase activator 1C	NM_005459|GUCA1C|9626|guanylate cyclase activator 1C
hg18_v1_chr11_-_58032153_58032153	0.462157	LHX3,4.p2	NM_001005218|OR5B21|219968|olfactory receptor, family 5, subfamily B, member 21
hg18_v1_chr21_+_29374743_29374743	0.453944	LHX3,4.p2	AY171599|C21orf7|56911|chromosome 21 open reading frame 7	NM_020152|C21orf7|56911|chromosome 21 open reading frame 7
hg18_v1_chr12_-_101398429_101398436	0.451236	LHX3,4.p2	BC152321|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	M27544|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg18_v1_chr2_-_80384454_80384495	0.45072	LHX3,4.p2	AY182024|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1
hg18_v1_chr6_+_53043729_53043729	0.444839	LHX3,4.p2	AF176704|FBXO9|26268|F-box protein 9	NM_012347|FBXO9|26268|F-box protein 9
hg18_v1_chr7_-_122627235_122627260	0.441192	LHX3,4.p2	AK026413|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1	AK314537|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1	AF260824|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1	BC111775|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1	NM_022444|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1
hg18_v1_chr2_+_161980865_161980990	0.441156	LHX3,4.p2	NM_006593|TBR1|10716|T-box, brain, 1	BC104844|TBR1|10716|T-box, brain, 1	BC113418|TBR1|10716|T-box, brain, 1
hg18_v1_chr1_+_196874759_196874833	0.43986	LHX3,4.p2	NM_002838|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	NM_080921|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	NM_080923|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	AK308217|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	AK310898|PTPRC|5788|protein tyrosine phosphatase, receptor type, C
hg18_v1_chr5_-_1935764_1935879	0.439232	LHX3,4.p2	BC110912|IRX4|50805|iroquois homeobox 4	BC144204|IRX4|50805|iroquois homeobox 4	BC136505|IRX4|50805|iroquois homeobox 4	BC136506|IRX4|50805|iroquois homeobox 4	AF124733|IRX4|50805|iroquois homeobox 4	NM_016358|IRX4|50805|iroquois homeobox 4
hg18_v1_chr12_-_25041639_25041719	0.433936	LHX3,4.p2	BC035880|C12orf77|196415|chromosome 12 open reading frame 77	NM_001101339|C12orf77|196415|chromosome 12 open reading frame 77	BC046192|C12orf77|196415|chromosome 12 open reading frame 77	BC062789|C12orf77|196415|chromosome 12 open reading frame 77
hg18_v1_chr17_-_1195096_1195116	0.432626	LHX3,4.p2	L13388|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)
hg18_v1_chr15_-_70350609_70350681	0.432235	LHX3,4.p2	CR593713|PARP6|56965|poly (ADP-ribose) polymerase family, member 6	NM_020214|PARP6|56965|poly (ADP-ribose) polymerase family, member 6
hg18_v1_chr4_-_176970895_176970905	0.431405	LHX3,4.p2	BC044612|GPM6A|2823|glycoprotein M6A	BC053954|GPM6A|2823|glycoprotein M6A
hg18_v1_chr4_+_38740246_38740246	0.429744	LHX3,4.p2	AK289785|KLHL5|51088|kelch-like 5 (Drosophila)	NM_015990|KLHL5|51088|kelch-like 5 (Drosophila)	NM_199039|KLHL5|51088|kelch-like 5 (Drosophila)
hg18_v1_chr9_+_124172644_124172677	0.426647	LHX3,4.p2	AK295221|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)
hg18_v1_chrX_+_37524250_37524275	0.425962	LHX3,4.p2	AK304033|CYBB|1536|cytochrome b-245, beta polypeptide	AK301491|CYBB|1536|cytochrome b-245, beta polypeptide	AK312929|CYBB|1536|cytochrome b-245, beta polypeptide	AK301476|CYBB|1536|cytochrome b-245, beta polypeptide	X04011|CYBB|1536|cytochrome b-245, beta polypeptide	DQ890878|CYBB|1536|cytochrome b-245, beta polypeptide	DQ894032|CYBB|1536|cytochrome b-245, beta polypeptide	CR622452|CYBB|1536|cytochrome b-245, beta polypeptide	CR601230|CYBB|1536|cytochrome b-245, beta polypeptide
hg18_v1_chr6_+_31538934_31538989	0.425787	LHX3,4.p2	NM_006674|HCP5|10866|HLA complex P5	BX640979|HCP5|10866|HLA complex P5	AK093953|HCP5|10866|HLA complex P5	AK290875|HCP5|10866|HLA complex P5	L06175|HCP5|10866|HLA complex P5	CR626077|HCP5|10866|HLA complex P5	BC106759|HCP5|10866|HLA complex P5	BC113853|HCP5|10866|HLA complex P5	BC114462|HCP5|10866|HLA complex P5
hg18_v1_chr11_-_58099884_58099965	0.420606	LHX3,4.p2	BC007490|LPXN|9404|leupaxin	BC019035|LPXN|9404|leupaxin	CR591836|LPXN|9404|leupaxin	CR612739|LPXN|9404|leupaxin	AK313306|LPXN|9404|leupaxin	AK223165|LPXN|9404|leupaxin	AK301093|LPXN|9404|leupaxin	AF062075|LPXN|9404|leupaxin	NM_004811|LPXN|9404|leupaxin
hg18_v1_chr3_+_188222337_188222396	0.418256	LHX3,4.p2	AK292879|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1	BC040009|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1	NM_003032|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1	X62822|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1	BC031476|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1	L11720|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1	X54363|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1
hg18_v1_chr3_-_55489973_55489995	0.414672	LHX3,4.p2	BC074783|WNT5A|7474|wingless-type MMTV integration site family, member 5A
hg18_v1_chr3_-_168674502_168674527	0.40925	LHX3,4.p2	AK226025|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2	AB006423|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2	NM_006217|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2	AK293391|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2
hg18_v1_chr1_+_246682699_246682721	0.405814	LHX3,4.p2	BC136961|OR2T2|401992|olfactory receptor, family 2, subfamily T, member 2	BC136962|OR2T2|401992|olfactory receptor, family 2, subfamily T, member 2	NM_001004136|OR2T2|401992|olfactory receptor, family 2, subfamily T, member 2
hg18_v1_chr9_+_124172606_124172642	0.396416	LHX3,4.p2	AK308222|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)
hg18_v1_chr1_+_166516901_166516952	0.394057	LHX3,4.p2	AJ010277|TBX19|9095|T-box 19	NM_005149|TBX19|9095|T-box 19	BC093664|TBX19|9095|T-box 19	BC093666|TBX19|9095|T-box 19	EU446671|TBX19|9095|T-box 19
hg18_v1_chr16_-_66075216_66075216	0.39304	LHX3,4.p2	NM_001138|AGRP|181|agouti related protein homolog (mouse)	U88063|AGRP|181|agouti related protein homolog (mouse)
hg18_v1_chrX_-_55074125_55074221	0.388673	LHX3,4.p2	CR620984|ALAS2|212|aminolevulinate, delta-, synthase 2	AK291589|ALAS2|212|aminolevulinate, delta-, synthase 2	X60364|ALAS2|212|aminolevulinate, delta-, synthase 2	AK313118|ALAS2|212|aminolevulinate, delta-, synthase 2	NM_000032|ALAS2|212|aminolevulinate, delta-, synthase 2	NM_001037967|ALAS2|212|aminolevulinate, delta-, synthase 2	NM_001037968|ALAS2|212|aminolevulinate, delta-, synthase 2
hg18_v1_chr7_-_86433139_86433226	0.385617	LHX3,4.p2	AK296250|KIAA1324L|222223|KIAA1324-like	NM_152748|KIAA1324L|222223|KIAA1324-like
hg18_v1_chr7_-_36730525_36730678	0.385497	LHX3,4.p2	M62840|AOAH|313|acyloxyacyl hydrolase (neutrophil)	AK297016|AOAH|313|acyloxyacyl hydrolase (neutrophil)	AK308215|AOAH|313|acyloxyacyl hydrolase (neutrophil)	BC025698|AOAH|313|acyloxyacyl hydrolase (neutrophil)	AK223476|AOAH|313|acyloxyacyl hydrolase (neutrophil)	NM_001177506|AOAH|313|acyloxyacyl hydrolase (neutrophil)	NM_001177507|AOAH|313|acyloxyacyl hydrolase (neutrophil)	NM_001637|AOAH|313|acyloxyacyl hydrolase (neutrophil)
hg18_v1_chr8_+_98772537_98772572	0.385344	LHX3,4.p2	AK308030|MTDH|92140|metadherin
hg18_v1_chr11_-_35235325_35235478	0.385337	LHX3,4.p2	CR627009|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	CR626999|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2
hg18_v1_chr12_-_101036407_101036490	0.384882	LHX3,4.p2	AK026271|NUP37|79023|nucleoporin 37kDa	AF514994|NUP37|79023|nucleoporin 37kDa	BC000861|NUP37|79023|nucleoporin 37kDa	NM_024057|NUP37|79023|nucleoporin 37kDa
hg18_v1_chr4_-_176970407_176970464	0.376283	LHX3,4.p2	BC010461|GPM6A|2823|glycoprotein M6A	BC022508|GPM6A|2823|glycoprotein M6A	D49958|GPM6A|2823|glycoprotein M6A
hg18_v1_chr8_-_7207899_7207899	0.375989	LHX3,4.p2	NM_001164457|ZNF705G|100131980|zinc finger protein 705G
hg18_v1_chr9_-_116305273_116305315	0.373311	LHX3,4.p2	AL110228|DFNB31|25861|deafness, autosomal recessive 31	NM_001083885|DFNB31|25861|deafness, autosomal recessive 31
hg18_v1_chr2_-_175170674_175170781	0.372311	LHX3,4.p2	BC002914|WIPF1|7456|WAS/WASL interacting protein family, member 1	X86019|WIPF1|7456|WAS/WASL interacting protein family, member 1
hg18_v1_chr6_+_31661934_31662004	0.372138	LHX3,4.p2	NM_205838|LST1|7940|leukocyte specific transcript 1	NM_205839|LST1|7940|leukocyte specific transcript 1	BX647293|LST1|7940|leukocyte specific transcript 1	AF000425|LST1|7940|leukocyte specific transcript 1	CR591668|LST1|7940|leukocyte specific transcript 1
hg18_v1_chr17_-_38087366_38087370	0.370566	LHX3,4.p2	AF208237|CCR10|2826|chemokine (C-C motif) receptor 10	AY429103|CCR10|2826|chemokine (C-C motif) receptor 10	EU832758|CCR10|2826|chemokine (C-C motif) receptor 10	GQ129298|CCR10|2826|chemokine (C-C motif) receptor 10	AF215981|CCR10|2826|chemokine (C-C motif) receptor 10	BC098132|CCR10|2826|chemokine (C-C motif) receptor 10	BC098157|CCR10|2826|chemokine (C-C motif) receptor 10	BC098304|CCR10|2826|chemokine (C-C motif) receptor 10	BC099840|CCR10|2826|chemokine (C-C motif) receptor 10	NM_016602|CCR10|2826|chemokine (C-C motif) receptor 10
hg18_v1_chrX_+_99726445_99726670	0.365989	LHX3,4.p2	NM_022144|TNMD|64102|tenomodulin	AF191770|TNMD|64102|tenomodulin	BC034030|TNMD|64102|tenomodulin	AF291656|TNMD|64102|tenomodulin	AF234259|TNMD|64102|tenomodulin	AY358706|TNMD|64102|tenomodulin	AB055421|TNMD|64102|tenomodulin
hg18_v1_chr3_-_11598829_11598837	0.363877	LHX3,4.p2	AK307708|VGLL4|9686|vestigial like 4 (Drosophila)	NM_001128220|VGLL4|9686|vestigial like 4 (Drosophila)
hg18_v1_chr9_+_92603832_92603883	0.362622	LHX3,4.p2	AK075020|SYK|6850|spleen tyrosine kinase	NM_001135052|SYK|6850|spleen tyrosine kinase	NM_003177|SYK|6850|spleen tyrosine kinase
hg18_v1_chr5_+_60969392_60969392	0.360879	LHX3,4.p2	AK094862|FLJ37543|285668|hypothetical protein FLJ37543	NM_173667|FLJ37543|285668|hypothetical protein FLJ37543
hg18_v1_chr14_+_74968589_74968589	0.360353	LHX3,4.p2	BC051303|JDP2|122953|Jun dimerization protein 2	NM_001135049|JDP2|122953|Jun dimerization protein 2
hg18_v1_chr14_-_106249999_106250382	0.360259	LHX3,4.p2	AK097955|IGHA1|3493|immunoglobulin heavy constant alpha 1
hg18_v1_chr3_+_123779122_123779219	0.359431	LHX3,4.p2	NM_001113523|PARP15|165631|poly (ADP-ribose) polymerase family, member 15	BX647656|PARP15|165631|poly (ADP-ribose) polymerase family, member 15	DQ063586|PARP15|165631|poly (ADP-ribose) polymerase family, member 15
hg18_v1_chr5_+_140772691_140772926	0.357532	LHX3,4.p2	BC014509|PCDHGA10|56106|protocadherin gamma subfamily A, 10	BC093873|PCDHGA10|56106|protocadherin gamma subfamily A, 10	BC093875|PCDHGA10|56106|protocadherin gamma subfamily A, 10	AF152319|PCDHGA10|56106|protocadherin gamma subfamily A, 10	AF152503|PCDHGA10|56106|protocadherin gamma subfamily A, 10	NM_018913|PCDHGA10|56106|protocadherin gamma subfamily A, 10	NM_032090|PCDHGA10|56106|protocadherin gamma subfamily A, 10
hg18_v1_chr16_-_3567354_3567447	0.353561	LHX3,4.p2	AY601811|NLRC3|197358|NLR family, CARD domain containing 3	NM_178844|NLRC3|197358|NLR family, CARD domain containing 3	AK090431|NLRC3|197358|NLR family, CARD domain containing 3	AK090476|NLRC3|197358|NLR family, CARD domain containing 3
hg18_v1_chr8_+_32905027_32905036	0.351294	LHX3,4.p2	
hg18_v1_chr6_-_76022565_76022647	0.347714	LHX3,4.p2	AJ420517|TMEM30A|55754|transmembrane protein 30A
hg18_v1_chr3_+_161425946_161426116	0.341668	LHX3,4.p2	NM_001168214|LOC401097|401097|hypothetical protein LOC401097
hg18_v1_chr16_+_2749934_2750071	0.341242	LHX3,4.p2	
hg18_v1_chr4_-_185921384_185921392	0.33777	LHX3,4.p2	CR598751|ACSL1|2180|acyl-CoA synthetase long-chain family member 1
hg18_v1_chr17_-_9863929_9864047	0.337414	LHX3,4.p2	BT006891|GAS7|8522|growth arrest-specific 7	DQ892802|GAS7|8522|growth arrest-specific 7	DQ895910|GAS7|8522|growth arrest-specific 7	AB209030|GAS7|8522|growth arrest-specific 7	AK294829|GAS7|8522|growth arrest-specific 7
hg18_v1_chr12_-_16652202_16652290	0.336927	LHX3,4.p2	AF258348|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	BC017777|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	AB044746|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	AK095595|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	AK308826|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	NM_001001395|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg18_v1_chr8_-_101384633_101384662	0.334984	LHX3,4.p2	AB271913|RNF19A|25897|ring finger protein 19A	AB029316|RNF19A|25897|ring finger protein 19A	NM_015435|RNF19A|25897|ring finger protein 19A
hg18_v1_chr1_+_13903936_13903936	0.333707	LHX3,4.p2	NM_012231|PRDM2|7799|PR domain containing 2, with ZNF domain	NM_015866|PRDM2|7799|PR domain containing 2, with ZNF domain	U17838|PRDM2|7799|PR domain containing 2, with ZNF domain
hg18_v1_chr21_-_30510113_30510339	0.333204	LHX3,4.p2	DQ892002|CLDN8|9073|claudin 8	DQ895192|CLDN8|9073|claudin 8	BC058004|CLDN8|9073|claudin 8	AY358707|CLDN8|9073|claudin 8	BC020866|CLDN8|9073|claudin 8	AK223512|CLDN8|9073|claudin 8	AK022269|CLDN8|9073|claudin 8	NM_199328|CLDN8|9073|claudin 8
hg18_v1_chr18_+_27281729_27281755	0.332253	LHX3,4.p2	AK290367|DSG3|1830|desmoglein 3	NM_001944|DSG3|1830|desmoglein 3	M76482|DSG3|1830|desmoglein 3
hg18_v1_chr4_-_77163609_77163673	0.331692	LHX3,4.p2	DQ892786|CXCL10|3627|chemokine (C-X-C motif) ligand 10	DQ896033|CXCL10|3627|chemokine (C-X-C motif) ligand 10	BC010954|CXCL10|3627|chemokine (C-X-C motif) ligand 10	NM_001565|CXCL10|3627|chemokine (C-X-C motif) ligand 10	X02530|CXCL10|3627|chemokine (C-X-C motif) ligand 10
hg18_v1_chr1_+_157067729_157067791	0.329553	LHX3,4.p2	BC020715|MNDA|4332|myeloid cell nuclear differentiation antigen	BC032319|MNDA|4332|myeloid cell nuclear differentiation antigen	AK290392|MNDA|4332|myeloid cell nuclear differentiation antigen	AK313210|MNDA|4332|myeloid cell nuclear differentiation antigen	M81750|MNDA|4332|myeloid cell nuclear differentiation antigen	NM_002432|MNDA|4332|myeloid cell nuclear differentiation antigen
hg18_v1_chr2_-_65013070_65013093	0.326068	LHX3,4.p2	BC037562|LOC400958|400958|hypothetical LOC400958
hg18_v1_chrX_+_115215985_115216061	0.322655	LHX3,4.p2	AK313927|AGTR2|186|angiotensin II receptor, type 2	NM_000686|AGTR2|186|angiotensin II receptor, type 2	X87723|AGTR2|186|angiotensin II receptor, type 2	U16957|AGTR2|186|angiotensin II receptor, type 2
hg18_v1_chr7_+_28418668_28418668	0.321892	LHX3,4.p2	L05515|CREB5|9586|cAMP responsive element binding protein 5	NM_182898|CREB5|9586|cAMP responsive element binding protein 5
hg18_v1_chr1_-_152845399_152845399	0.321145	LHX3,4.p2	NM_001193495|ADAR|103|adenosine deaminase, RNA-specific	X79448|ADAR|103|adenosine deaminase, RNA-specific
hg18_v1_chr8_-_72436519_72436560	0.320408	LHX3,4.p2	AK127798|EYA1|2138|eyes absent homolog 1 (Drosophila)	AK295897|EYA1|2138|eyes absent homolog 1 (Drosophila)
hg18_v1_chr6_+_167445284_167445284	0.318404	LHX3,4.p2	NM_004367|CCR6|1235|chemokine (C-C motif) receptor 6
hg18_v1_chr3_-_159872960_159873175	0.317048	LHX3,4.p2	EU831968|LXN|56925|latexin	EU832061|LXN|56925|latexin	CR605027|LXN|56925|latexin	AF087851|LXN|56925|latexin	AF282594|LXN|56925|latexin	AF282626|LXN|56925|latexin	BC008438|LXN|56925|latexin	CR622283|LXN|56925|latexin	BC005346|LXN|56925|latexin	NM_020169|LXN|56925|latexin
hg18_v1_chr1_+_242283129_242283204	0.313872	LHX3,4.p2	BC078175|ZNF238|10472|zinc finger protein 238	AJ001388|ZNF238|10472|zinc finger protein 238	NM_006352|ZNF238|10472|zinc finger protein 238
hg18_v1_chr8_-_82536312_82536312	0.31159	LHX3,4.p2	NM_001080526|FABP9|646480|fatty acid binding protein 9, testis
hg18_v1_chr4_+_88790477_88790482	0.30761	LHX3,4.p2	NM_001079911|DMP1|1758|dentin matrix acidic phosphoprotein 1	NM_004407|DMP1|1758|dentin matrix acidic phosphoprotein 1	U65378|DMP1|1758|dentin matrix acidic phosphoprotein 1	U89012|DMP1|1758|dentin matrix acidic phosphoprotein 1
hg18_v1_chr7_+_129057152_129057154	0.307456	LHX3,4.p2	L22454|NRF1|4899|nuclear respiratory factor 1	NM_001040110|NRF1|4899|nuclear respiratory factor 1
hg18_v1_chr12_+_54672766_54673049	0.306979	LHX3,4.p2	CR621175|RAB5B|5869|RAB5B, member RAS oncogene family	CR597002|RAB5B|5869|RAB5B, member RAS oncogene family	CR594499|RAB5B|5869|RAB5B, member RAS oncogene family	CR614791|RAB5B|5869|RAB5B, member RAS oncogene family
hg18_v1_chr6_+_31691745_31691867	0.305393	LHX3,4.p2	NM_032955|AIF1|199|allograft inflammatory factor 1	EF070982|AIF1|199|allograft inflammatory factor 1	AF299327|AIF1|199|allograft inflammatory factor 1	CR542153|AIF1|199|allograft inflammatory factor 1
hg18_v1_chr1_-_155336223_155336223	0.302462	LHX3,4.p2	AK131392|ETV3L|440695|ets variant 3-like	NM_001004341|ETV3L|440695|ets variant 3-like
hg18_v1_chr11_+_33306652_33306721	0.300212	LHX3,4.p2	AY425958|HIPK3|10114|homeodomain interacting protein kinase 3
hg18_v1_chr14_+_66901237_66901331	0.297903	LHX3,4.p2	DQ892151|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa	DQ895347|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
hg18_v1_chr6_+_158654890_158654925	0.297703	LHX3,4.p2	
hg18_v1_chrX_+_107174855_107174976	0.297128	LHX3,4.p2	BX648658|VSIG1|340547|V-set and immunoglobulin domain containing 1	NM_001170553|VSIG1|340547|V-set and immunoglobulin domain containing 1	NM_182607|VSIG1|340547|V-set and immunoglobulin domain containing 1	AK301783|VSIG1|340547|V-set and immunoglobulin domain containing 1	BC043216|VSIG1|340547|V-set and immunoglobulin domain containing 1	BX640913|VSIG1|340547|V-set and immunoglobulin domain containing 1	AK315846|VSIG1|340547|V-set and immunoglobulin domain containing 1	AK301311|VSIG1|340547|V-set and immunoglobulin domain containing 1	AK292472|VSIG1|340547|V-set and immunoglobulin domain containing 1
hg18_v1_chr1_+_84540921_84540921	0.296087	LHX3,4.p2	BC037973|SAMD13|148418|sterile alpha motif domain containing 13	NM_001134664|SAMD13|148418|sterile alpha motif domain containing 13
hg18_v1_chr14_+_69307914_69308067	0.293892	LHX3,4.p2	CR622610|SRSF5|6430|serine/arginine-rich splicing factor 5
hg18_v1_chr18_+_70352779_70352843	0.292589	LHX3,4.p2	AK314572|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	AK098369|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	AK289916|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	AK303708|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	BC110295|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	AJ417564|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	BC113512|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	BC117122|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)
hg18_v1_chr3_-_12561962_12561962	0.292175	LHX3,4.p2	NM_001195279|LOC100129480|100129480|hypothetical protein LOC100129480
hg18_v1_chr9_-_21375258_21375395	0.291806	LHX3,4.p2	AY255838|IFNA2|3440|interferon, alpha 2	V00548|IFNA2|3440|interferon, alpha 2	CR541921|IFNA2|3440|interferon, alpha 2	BC074936|IFNA2|3440|interferon, alpha 2	BC074937|IFNA2|3440|interferon, alpha 2	BC104163|IFNA2|3440|interferon, alpha 2	BC104164|IFNA2|3440|interferon, alpha 2	M54886|IFNA2|3440|interferon, alpha 2	V00544|IFNA2|3440|interferon, alpha 2	V00549|IFNA2|3440|interferon, alpha 2	NM_000605|IFNA2|3440|interferon, alpha 2
hg18_v1_chr3_+_52212969_52212975	0.287846	LHX3,4.p2	CR590706|ALAS1|211|aminolevulinate, delta-, synthase 1
hg18_v1_chr3_-_152403636_152403677	0.287609	LHX3,4.p2	AF002986|GPR171|29909|G protein-coupled receptor 171	BC036815|GPR171|29909|G protein-coupled receptor 171	NM_013308|GPR171|29909|G protein-coupled receptor 171
hg18_v1_chr2_-_191580567_191580627	0.286937	LHX3,4.p2	BC141921|STAT1|6772|signal transducer and activator of transcription 1, 91kDa
hg18_v1_chr5_+_57823017_57823086	0.285879	LHX3,4.p2	AK090960|GAPT|202309|GRB2-binding adaptor protein, transmembrane	NM_152687|GAPT|202309|GRB2-binding adaptor protein, transmembrane
hg18_v1_chrX_+_153186602_153186602	0.284514	LHX3,4.p2	NM_001145934|TKTL1|8277|transketolase-like 1
hg18_v1_chr15_+_97990705_97990879	0.280887	LHX3,4.p2	NM_001130928|MEF2A|4205|myocyte enhancer factor 2A	BC053871|MEF2A|4205|myocyte enhancer factor 2A	AM392739|MEF2A|4205|myocyte enhancer factor 2A	AM393856|MEF2A|4205|myocyte enhancer factor 2A	EU446488|MEF2A|4205|myocyte enhancer factor 2A
hg18_v1_chr14_-_105610144_105610625	0.279945	LHX3,4.p2	BC067091|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	AF283666|IGHA1|3493|immunoglobulin heavy constant alpha 1	BC075846|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	BC037361|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	AK097906|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)
hg18_v1_chr13_+_51933228_51933360	0.278834	LHX3,4.p2	AL136848|CKAP2|26586|cytoskeleton associated protein 2
hg18_v1_chr1_+_111215343_111215361	0.278157	LHX3,4.p2	NM_001040033|CD53|963|CD53 molecule	BC035456|CD53|963|CD53 molecule
hg18_v1_chr1_-_151587645_151587668	0.277852	LHX3,4.p2	AY035377|PGLYRP4|57115|peptidoglycan recognition protein 4	NM_020393|PGLYRP4|57115|peptidoglycan recognition protein 4	AF242518|PGLYRP4|57115|peptidoglycan recognition protein 4
hg18_v1_chr8_-_102872372_102872380	0.277602	LHX3,4.p2	AK055073|NCALD|83988|neurocalcin delta	AK314523|NCALD|83988|neurocalcin delta
hg18_v1_chr1_+_40635058_40635093	0.276654	LHX3,4.p2	AK316218|SMAP2|64744|small ArfGAP2	NM_001198980|SMAP2|64744|small ArfGAP2	AK298702|SMAP2|64744|small ArfGAP2
hg18_v1_chr1_+_158636987_158637019	0.276527	LHX3,4.p2	NM_020335|VANGL2|57216|vang-like 2 (van gogh, Drosophila)
hg18_v1_chr1_+_154120170_154120225	0.275777	LHX3,4.p2	AK026178|SYT11|23208|synaptotagmin XI
hg18_v1_chr3_-_166278969_166278976	0.275524	LHX3,4.p2	BC132834|SI|6476|sucrase-isomaltase (alpha-glucosidase)	BC132860|SI|6476|sucrase-isomaltase (alpha-glucosidase)	BC115033|SI|6476|sucrase-isomaltase (alpha-glucosidase)	BC115034|SI|6476|sucrase-isomaltase (alpha-glucosidase)	BC116452|SI|6476|sucrase-isomaltase (alpha-glucosidase)	BC116453|SI|6476|sucrase-isomaltase (alpha-glucosidase)	X63597|SI|6476|sucrase-isomaltase (alpha-glucosidase)	NM_001041|SI|6476|sucrase-isomaltase (alpha-glucosidase)
hg18_v1_chr4_+_71806538_71806631	0.27387	LHX3,4.p2	NM_001037442|RUFY3|22902|RUN and FYVE domain containing 3	NM_014961|RUFY3|22902|RUN and FYVE domain containing 3	BC051716|RUFY3|22902|RUN and FYVE domain containing 3	CR598922|RUFY3|22902|RUN and FYVE domain containing 3	BC053837|RUFY3|22902|RUN and FYVE domain containing 3	BC098433|RUFY3|22902|RUN and FYVE domain containing 3	AB020678|RUFY3|22902|RUN and FYVE domain containing 3	BC071988|RUFY3|22902|RUN and FYVE domain containing 3
hg18_v1_chr3_+_45902999_45903120	0.273815	LHX3,4.p2	NM_006641|CCR9|10803|chemokine (C-C motif) receptor 9	NM_031200|CCR9|10803|chemokine (C-C motif) receptor 9	AF145439|CCR9|10803|chemokine (C-C motif) receptor 9	BC069678|CCR9|10803|chemokine (C-C motif) receptor 9	AK312824|CCR9|10803|chemokine (C-C motif) receptor 9	AK313366|CCR9|10803|chemokine (C-C motif) receptor 9	AF145440|CCR9|10803|chemokine (C-C motif) receptor 9	AF145207|CCR9|10803|chemokine (C-C motif) receptor 9	AJ132337|CCR9|10803|chemokine (C-C motif) receptor 9
hg18_v1_chr7_+_110518297_110518421	0.27203	LHX3,4.p2	NM_001099658|LRRN3|54674|leucine rich repeat neuronal 3	NM_001099660|LRRN3|54674|leucine rich repeat neuronal 3	NM_018334|LRRN3|54674|leucine rich repeat neuronal 3	AK001991|LRRN3|54674|leucine rich repeat neuronal 3	BC035133|LRRN3|54674|leucine rich repeat neuronal 3
hg18_v1_chr12_-_101398503_101398521	0.271003	LHX3,4.p2	AB209184|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	NM_000618|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	NM_001111283|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	NM_001111285|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg18_v1_chr6_-_56824371_56824452	0.268653	LHX3,4.p2	AK294830|DST|667|dystonin
hg18_v1_chr11_-_58368555_58368574	0.26788	LHX3,4.p2	BC021682|GLYATL2|219970|glycine-N-acyltransferase-like 2	NM_145016|GLYATL2|219970|glycine-N-acyltransferase-like 2	BC016789|GLYATL2|219970|glycine-N-acyltransferase-like 2
hg18_v1_chr19_-_60458915_60458962	0.264212	LHX3,4.p2	AK297152|PPP6R1|22870|protein phosphatase 6, regulatory subunit 1
hg18_v1_chr9_-_14076901_14077003	0.264054	LHX3,4.p2	BX537698|NFIB|4781|nuclear factor I/B
hg18_v1_chr4_-_54152385_54152416	0.263901	LHX3,4.p2	BC022983|LNX1|84708|ligand of numb-protein X 1
hg18_v1_chr7_+_18296569_18296599	0.263545	LHX3,4.p2	AK097178|HDAC9|9734|histone deacetylase 9
hg18_v1_chr6_-_29635680_29635680	0.262094	LHX3,4.p2	AF123050|UBD|10537|ubiquitin D	NM_006398|UBD|10537|ubiquitin D
hg18_v1_chr11_-_102081654_102081677	0.261846	LHX3,4.p2	AF195192|MMP27|64066|matrix metallopeptidase 27	AY358752|MMP27|64066|matrix metallopeptidase 27	NM_022122|MMP27|64066|matrix metallopeptidase 27
hg18_v1_chr12_-_101398288_101398403	0.261154	LHX3,4.p2	BC148266|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	CR541861|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	X56773|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	X56774|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	M29644|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	X00173|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg18_v1_chr2_+_161701711_161701711	0.257867	LHX3,4.p2	NM_004180|TANK|10010|TRAF family member-associated NFKB activator	NM_133484|TANK|10010|TRAF family member-associated NFKB activator	U59863|TANK|10010|TRAF family member-associated NFKB activator	U63830|TANK|10010|TRAF family member-associated NFKB activator
hg18_v1_chr1_+_156991133_156991229	0.256601	LHX3,4.p2	BC140743|OR6K6|128371|olfactory receptor, family 6, subfamily K, member 6	NM_001005184|OR6K6|128371|olfactory receptor, family 6, subfamily K, member 6
hg18_v1_chr3_-_114047479_114047486	0.255893	LHX3,4.p2	BC144504|CD200R1L|344807|CD200 receptor 1-like	BC144507|CD200R1L|344807|CD200 receptor 1-like	AY284976|CD200R1L|344807|CD200 receptor 1-like	AY552790|CD200R1L|344807|CD200 receptor 1-like	NM_001008784|CD200R1L|344807|CD200 receptor 1-like
hg18_v1_chr17_+_18027816_18028013	0.253105	LHX3,4.p2	AK301107|ALKBH5|54890|alkB, alkylation repair homolog 5 (E. coli)	BC062339|ALKBH5|54890|alkB, alkylation repair homolog 5 (E. coli)
hg18_v1_chrX_+_135558001_135558073	0.251999	LHX3,4.p2	BC071754|CD40LG|959|CD40 ligand	NM_000074|CD40LG|959|CD40 ligand	AK292637|CD40LG|959|CD40 ligand	X68550|CD40LG|959|CD40 ligand	X67878|CD40LG|959|CD40 ligand	L07414|CD40LG|959|CD40 ligand	BC074950|CD40LG|959|CD40 ligand	Z15017|CD40LG|959|CD40 ligand	FN298241|CD40LG|959|CD40 ligand	AF529195|CD40LG|959|CD40 ligand	AY197739|CD40LG|959|CD40 ligand
hg18_v1_chr15_+_100175888_100175912	0.250063	LHX3,4.p2	BC137064|OR4F15|390649|olfactory receptor, family 4, subfamily F, member 15	BC137065|OR4F15|390649|olfactory receptor, family 4, subfamily F, member 15	NM_001001674|OR4F15|390649|olfactory receptor, family 4, subfamily F, member 15
hg18_v1_chr13_+_48923688_48923775	0.248812	LHX3,4.p2	BC047434|SETDB2|83852|SET domain, bifurcated 2	NM_001160308|SETDB2|83852|SET domain, bifurcated 2	AK307593|SETDB2|83852|SET domain, bifurcated 2
hg18_v1_chr12_-_56422120_56422208	0.248799	LHX3,4.p2	AF413077|AGAP2|116986|ArfGAP with GTPase domain, ankyrin repeat and PH domain 2	BC028020|AGAP2|116986|ArfGAP with GTPase domain, ankyrin repeat and PH domain 2	AK292672|AGAP2|116986|ArfGAP with GTPase domain, ankyrin repeat and PH domain 2	AF384128|AGAP2|116986|ArfGAP with GTPase domain, ankyrin repeat and PH domain 2	NM_014770|AGAP2|116986|ArfGAP with GTPase domain, ankyrin repeat and PH domain 2	D79989|AGAP2|116986|ArfGAP with GTPase domain, ankyrin repeat and PH domain 2
hg18_v1_chr5_-_22889487_22889487	0.248657	LHX3,4.p2	L33477|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)	NM_004061|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)
hg18_v1_chr12_-_101398470_101398474	0.2473	LHX3,4.p2	M11568|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg18_v1_chr13_-_48873735_48873735	0.2461	LHX3,4.p2	NM_030925|CAB39L|81617|calcium binding protein 39-like
hg18_v1_chrX_-_13745108_13745124	0.245049	LHX3,4.p2	AK299675|GPM6B|2824|glycoprotein M6B	BC047295|GPM6B|2824|glycoprotein M6B
hg18_v1_chr11_-_118405288_118405487	0.243104	LHX3,4.p2	AF110819|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4	AF110820|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4	AF110821|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4	AF110822|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4	CR456733|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4	AY423732|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4	Y15409|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4	BC064563|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4	BC002400|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4	BC003589|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4	CR594127|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4	CR624130|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4	NM_001164280|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4
hg18_v1_chr13_-_102517196_102517196	0.243068	LHX3,4.p2	NM_000452|SLC10A2|6555|solute carrier family 10 (sodium/bile acid cotransporter family), member 2	U10417|SLC10A2|6555|solute carrier family 10 (sodium/bile acid cotransporter family), member 2
hg18_v1_chr3_-_152585226_152585243	0.239909	LHX3,4.p2	AK292096|P2RY12|64805|purinergic receptor P2Y, G-protein coupled, 12	AK303714|P2RY12|64805|purinergic receptor P2Y, G-protein coupled, 12	AK316575|P2RY12|64805|purinergic receptor P2Y, G-protein coupled, 12	BC017898|P2RY12|64805|purinergic receptor P2Y, G-protein coupled, 12	NM_022788|P2RY12|64805|purinergic receptor P2Y, G-protein coupled, 12
hg18_v1_chr12_-_101398451_101398453	0.238352	LHX3,4.p2	AK312231|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	X57025|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg18_v1_chr12_+_52634950_52634980	0.238337	LHX3,4.p2	NM_173860|HOXC12|3228|homeobox C12
hg18_v1_chr2_+_37282516_37282652	0.237946	LHX3,4.p2	CR604989|LOC100505876|100505876|hypothetical LOC100505876
hg18_v1_chr7_-_37454933_37455054	0.237638	LHX3,4.p2	AL136787|ELMO1|9844|engulfment and cell motility 1	AK001084|ELMO1|9844|engulfment and cell motility 1	NM_014800|ELMO1|9844|engulfment and cell motility 1	AK314349|ELMO1|9844|engulfment and cell motility 1
hg18_v1_chr5_-_37220702_37220766	0.237165	LHX3,4.p2	AK055192|C5orf42|65250|chromosome 5 open reading frame 42
hg18_v1_chr9_+_110664366_110664423	0.237012	LHX3,4.p2	BC014610|ACTL7A|10881|actin-like 7A	AK314981|ACTL7A|10881|actin-like 7A	NM_006687|ACTL7A|10881|actin-like 7A
hg18_v1_chrX_-_142432884_142432972	0.236661	LHX3,4.p2	DQ336128|SPANXN3|139067|SPANX family, member N3	DQ336129|SPANXN3|139067|SPANX family, member N3	BC062750|SPANXN3|139067|SPANX family, member N3	NM_001009609|SPANXN3|139067|SPANX family, member N3
hg18_v1_chrX_-_110542040_110542115	0.236081	LHX3,4.p2	AF040254|DCX|1641|doublecortin	AF040255|DCX|1641|doublecortin	BC027925|DCX|1641|doublecortin	AK290455|DCX|1641|doublecortin	AK299822|DCX|1641|doublecortin	NM_178151|DCX|1641|doublecortin	NM_001195553|DCX|1641|doublecortin	NM_178152|DCX|1641|doublecortin	NM_178153|DCX|1641|doublecortin
hg18_v1_chr19_+_60962318_60962318	0.235837	LHX3,4.p2	NM_001145014|RFPL4A|342931|ret finger protein-like 4A
hg18_v1_chr1_+_165565006_165565121	0.235622	LHX3,4.p2	AY113189|POU2F1|5451|POU class 2 homeobox 1	BC001664|POU2F1|5451|POU class 2 homeobox 1	BC003571|POU2F1|5451|POU class 2 homeobox 1
hg18_v1_chr2_+_108604111_108604160	0.235327	LHX3,4.p2	AK304260|LIMS1|3987|LIM and senescent cell antigen-like domains 1	NM_001193484|LIMS1|3987|LIM and senescent cell antigen-like domains 1	AF527760|LIMS1|3987|LIM and senescent cell antigen-like domains 1	AK310547|LIMS1|3987|LIM and senescent cell antigen-like domains 1
hg18_v1_chr5_-_160211623_160211796	0.235116	LHX3,4.p2	AB018258|ATP10B|23120|ATPase, class V, type 10B	AK295081|ATP10B|23120|ATPase, class V, type 10B	AK090832|ATP10B|23120|ATPase, class V, type 10B	NM_025153|ATP10B|23120|ATPase, class V, type 10B
hg18_v1_chr1_+_242582559_242582559	0.234752	LHX3,4.p2	BC054479|C1orf100|200159|chromosome 1 open reading frame 100	NM_001012970|C1orf100|200159|chromosome 1 open reading frame 100
hg18_v1_chr11_+_128069165_128069178	0.232151	LHX3,4.p2	AK313370|FLI1|2313|Friend leukemia virus integration 1
hg18_v1_chr14_-_105623358_105623855	0.23172	LHX3,4.p2	BC021276|IGHD|3495|immunoglobulin heavy constant delta	BC006402|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	AK097367|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	AK123546|IGHA1|3493|immunoglobulin heavy constant alpha 1	AK128565|IGHA1|3493|immunoglobulin heavy constant alpha 1	AK128625|IGHD|3495|immunoglobulin heavy constant delta	AK129508|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	BX640627|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)
hg18_v1_chr14_+_91858677_91858677	0.231131	LHX3,4.p2	AF520706|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4	NM_153648|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4
hg18_v1_chr20_+_17622319_17622319	0.231091	LHX3,4.p2	NM_001159495|BANF2|140836|barrier to autointegration factor 2
hg18_v1_chr13_+_112349358_112349358	0.229413	LHX3,4.p2	AK129953|C13orf35|400165|chromosome 13 open reading frame 35	NM_207440|C13orf35|400165|chromosome 13 open reading frame 35
hg18_v1_chr2_-_227371698_227371749	0.228187	LHX3,4.p2	EU831611|IRS1|3667|insulin receptor substrate 1	EU831698|IRS1|3667|insulin receptor substrate 1	BC053895|IRS1|3667|insulin receptor substrate 1	NM_005544|IRS1|3667|insulin receptor substrate 1
hg18_v1_chr3_-_25654659_25654777	0.228011	LHX3,4.p2	M27504|TOP2B|7155|topoisomerase (DNA) II beta 180kDa
hg18_v1_chr3_+_138132006_138132048	0.226251	LHX3,4.p2	NM_001190796|NCK1|4690|NCK adaptor protein 1	AK301460|NCK1|4690|NCK adaptor protein 1
hg18_v1_chr2_+_178893216_178893216	0.225532	LHX3,4.p2	AK093902|OSBPL6|114880|oxysterol binding protein-like 6	NM_145739|OSBPL6|114880|oxysterol binding protein-like 6
hg18_v1_chr6_+_50789215_50789215	0.224092	LHX3,4.p2	AY028376|TFAP2D|83741|transcription factor AP-2 delta (activating enhancer binding protein 2 delta)	NM_172238|TFAP2D|83741|transcription factor AP-2 delta (activating enhancer binding protein 2 delta)
hg18_v1_chr5_+_132037271_132037271	0.224048	LHX3,4.p2	NM_000589|IL4|3565|interleukin 4	NM_172348|IL4|3565|interleukin 4
hg18_v1_chrX_-_13745234_13745239	0.224047	LHX3,4.p2	NM_001001995|GPM6B|2824|glycoprotein M6B	NM_001001996|GPM6B|2824|glycoprotein M6B	NM_005278|GPM6B|2824|glycoprotein M6B
hg18_v1_chrX_+_85404626_85404626	0.222641	LHX3,4.p2	AK055953|DACH2|117154|dachshund homolog 2 (Drosophila)	AK298787|DACH2|117154|dachshund homolog 2 (Drosophila)	NM_001139515|DACH2|117154|dachshund homolog 2 (Drosophila)
hg18_v1_chr2_+_102345528_102345552	0.221669	LHX3,4.p2	BC069575|IL18R1|8809|interleukin 18 receptor 1	BC093975|IL18R1|8809|interleukin 18 receptor 1	BC093977|IL18R1|8809|interleukin 18 receptor 1	BC143403|IL18R1|8809|interleukin 18 receptor 1	BC143405|IL18R1|8809|interleukin 18 receptor 1	NM_003855|IL18R1|8809|interleukin 18 receptor 1	U43672|IL18R1|8809|interleukin 18 receptor 1	AY192162|IL18R1|8809|interleukin 18 receptor 1
hg18_v1_chr4_+_88748704_88748704	0.219586	LHX3,4.p2	NM_014208|DSPP|1834|dentin sialophosphoprotein
hg18_v1_chr12_+_74071145_74071160	0.219554	LHX3,4.p2	BX640916|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2	BC029557|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2	NM_152436|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2	DQ891533|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2	DQ894722|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2
hg18_v1_chr4_-_57242492_57242628	0.218242	LHX3,4.p2	CR611831|HOPX|84525|HOP homeobox	AF492675|HOPX|84525|HOP homeobox	NM_001145460|HOPX|84525|HOP homeobox	NM_032495|HOPX|84525|HOP homeobox	NM_139212|HOPX|84525|HOP homeobox
hg18_v1_chr8_-_102872354_102872364	0.218112	LHX3,4.p2	AB209015|NCALD|83988|neurocalcin delta	AL136612|NCALD|83988|neurocalcin delta
hg18_v1_chrX_+_78087484_78087573	0.217145	LHX3,4.p2	NM_014499|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10	NM_198333|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10	AK313218|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10	AK292138|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10	BC051875|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10
hg18_v1_chr3_+_115099007_115099092	0.216968	LHX3,4.p2	AK304142|GRAMD1C|54762|GRAM domain containing 1C	NM_001172105|GRAMD1C|54762|GRAM domain containing 1C	AY358725|GRAMD1C|54762|GRAM domain containing 1C	AK292964|GRAMD1C|54762|GRAM domain containing 1C
hg18_v1_chr8_-_111056099_111056185	0.215652	LHX3,4.p2	BC028739|KCNV1|27012|potassium channel, subfamily V, member 1	AK313469|KCNV1|27012|potassium channel, subfamily V, member 1	AF167082|KCNV1|27012|potassium channel, subfamily V, member 1	NM_014379|KCNV1|27012|potassium channel, subfamily V, member 1	AK297393|KCNV1|27012|potassium channel, subfamily V, member 1
hg18_v1_chr3_-_9266251_9266385	0.214052	LHX3,4.p2	NM_001033117|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3	NM_014850|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3	BC140004|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3	AK054831|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3
hg18_v1_chr4_-_100492854_100492939	0.213156	LHX3,4.p2	BC074786|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	BC066227|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	BC066228|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	BC067419|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	BC067420|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	BC067421|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	BC067422|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	BC074771|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	BC062476|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	M12272|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	X04299|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	NM_000669|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide
hg18_v1_chr4_-_116254381_116254480	0.213077	LHX3,4.p2	BC113075|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4	BC012326|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4	AK289670|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4	AB036429|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4	NM_022569|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4
hg18_v1_chr4_-_54152480_54152522	0.212208	LHX3,4.p2	AK056823|LNX1|84708|ligand of numb-protein X 1	NM_001126328|LNX1|84708|ligand of numb-protein X 1
hg18_v1_chr12_+_14429499_14429579	0.210619	LHX3,4.p2	AK304184|ATF7IP|55729|activating transcription factor 7 interacting protein	BX648096|ATF7IP|55729|activating transcription factor 7 interacting protein
hg18_v1_chr4_-_68511738_68511826	0.210063	LHX3,4.p2	AY498712|TMPRSS11A|339967|transmembrane protease, serine 11A	BC111796|TMPRSS11A|339967|transmembrane protease, serine 11A	AK292950|TMPRSS11A|339967|transmembrane protease, serine 11A	AF071882|TMPRSS11A|339967|transmembrane protease, serine 11A	AK131518|TMPRSS11A|339967|transmembrane protease, serine 11A	NM_001114387|TMPRSS11A|339967|transmembrane protease, serine 11A	NM_182606|TMPRSS11A|339967|transmembrane protease, serine 11A
hg18_v1_chr10_+_18589589_18589703	0.209389	LHX3,4.p2	NM_000724|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AB208917|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	U95019|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit
hg18_v1_chr17_-_9864048_9864187	0.20818	LHX3,4.p2	AK309722|GAS7|8522|growth arrest-specific 7
hg18_v1_chrX_-_13745134_13745152	0.206374	LHX3,4.p2	AK095657|GPM6B|2824|glycoprotein M6B
hg18_v1_chr16_+_68284252_68284329	0.205201	LHX3,4.p2	U80231|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive	AK000312|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive
hg18_v1_chr22_+_21817512_21817697	0.202448	LHX3,4.p2	AB023061|RAB36|9609|RAB36, member RAS oncogene family	NM_004914|RAB36|9609|RAB36, member RAS oncogene family	BC104989|RAB36|9609|RAB36, member RAS oncogene family	BC104991|RAB36|9609|RAB36, member RAS oncogene family	CR456553|RAB36|9609|RAB36, member RAS oncogene family	AF133588|RAB36|9609|RAB36, member RAS oncogene family	AY336745|RAB36|9609|RAB36, member RAS oncogene family	CU013153|RAB36|9609|RAB36, member RAS oncogene family	CU013441|RAB36|9609|RAB36, member RAS oncogene family	AK296052|RAB36|9609|RAB36, member RAS oncogene family
hg18_v1_chr12_+_25096755_25096940	0.201823	LHX3,4.p2	BC029391|LRMP|4033|lymphoid-restricted membrane protein	AK303103|LRMP|4033|lymphoid-restricted membrane protein	AK303256|LRMP|4033|lymphoid-restricted membrane protein	BC126417|LRMP|4033|lymphoid-restricted membrane protein	BC144164|LRMP|4033|lymphoid-restricted membrane protein	BC144165|LRMP|4033|lymphoid-restricted membrane protein	BC144170|LRMP|4033|lymphoid-restricted membrane protein
hg18_v1_chr4_-_185963859_185963935	0.199503	LHX3,4.p2	AK296826|ACSL1|2180|acyl-CoA synthetase long-chain family member 1
hg18_v1_chr3_-_52688768_52688778	0.198406	LHX3,4.p2	AY281068|PBRM1|55193|polybromo 1	AF177387|PBRM1|55193|polybromo 1	AF225870|PBRM1|55193|polybromo 1	AF225871|PBRM1|55193|polybromo 1	AF225872|PBRM1|55193|polybromo 1	BC115009|PBRM1|55193|polybromo 1	BC115010|PBRM1|55193|polybromo 1	BC115011|PBRM1|55193|polybromo 1	BC116450|PBRM1|55193|polybromo 1	BC129934|PBRM1|55193|polybromo 1	BC129935|PBRM1|55193|polybromo 1	NM_018165|PBRM1|55193|polybromo 1	NM_181042|PBRM1|55193|polybromo 1
hg18_v1_chr6_-_33016561_33016824	0.198251	LHX3,4.p2	CR407606|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	DQ891141|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	DQ894320|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	BC027175|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	CR594625|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	Z23139|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	AB209577|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	CR591828|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	AK315979|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	CR611765|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	AK295872|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	AY645722|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	U15085|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	NM_002118|HLA-DMB|3109|major histocompatibility complex, class II, DM beta
hg18_v1_chr2_+_73864823_73864823	0.197725	LHX3,4.p2	AK125975|C2orf78|388960|chromosome 2 open reading frame 78	NM_001080474|C2orf78|388960|chromosome 2 open reading frame 78
hg18_v1_chr1_-_92725017_92725060	0.194747	LHX3,4.p2	U67369|GFI1|2672|growth factor independent 1 transcription repressor	NM_005263|GFI1|2672|growth factor independent 1 transcription repressor
hg18_v1_chrX_+_48572226_48572226	0.194503	LHX3,4.p2	AB093575|ERAS|3266|ES cell expressed Ras	NM_181532|ERAS|3266|ES cell expressed Ras
hg18_v1_chrX_-_102418329_102418452	0.193089	LHX3,4.p2	BC132922|TCEAL5|340543|transcription elongation factor A (SII)-like 5	BC132924|TCEAL5|340543|transcription elongation factor A (SII)-like 5	CR596252|TCEAL5|340543|transcription elongation factor A (SII)-like 5	NM_001012979|TCEAL5|340543|transcription elongation factor A (SII)-like 5
hg18_v1_chr5_+_147672181_147672219	0.192842	LHX3,4.p2	AF268198|SPINK7|84651|serine peptidase inhibitor, Kazal type 7 (putative)	NM_032566|SPINK7|84651|serine peptidase inhibitor, Kazal type 7 (putative)	AY359072|SPINK7|84651|serine peptidase inhibitor, Kazal type 7 (putative)	BC109385|SPINK7|84651|serine peptidase inhibitor, Kazal type 7 (putative)	BC110067|SPINK7|84651|serine peptidase inhibitor, Kazal type 7 (putative)
hg18_v1_chr1_-_158815850_158815892	0.192533	LHX3,4.p2	CR541847|CD84|8832|CD84 molecule	DQ891708|CD84|8832|CD84 molecule	DQ894872|CD84|8832|CD84 molecule	BC020063|CD84|8832|CD84 molecule	U82988|CD84|8832|CD84 molecule	AJ223324|CD84|8832|CD84 molecule	AK296290|CD84|8832|CD84 molecule	CR933666|CD84|8832|CD84 molecule
hg18_v1_chr6_-_56824672_56824674	0.191851	LHX3,4.p2	AK299898|DST|667|dystonin
hg18_v1_chr8_-_81155564_81155605	0.19139	LHX3,4.p2	AF202897|TPD52|7163|tumor protein D52	EF152584|TPD52|7163|tumor protein D52	NM_001025252|TPD52|7163|tumor protein D52	GQ499324|TPD52|7163|tumor protein D52	GQ499325|TPD52|7163|tumor protein D52	GQ499326|TPD52|7163|tumor protein D52	GQ499327|TPD52|7163|tumor protein D52	GQ499328|TPD52|7163|tumor protein D52
hg18_v1_chr17_-_60439764_60439772	0.19126	LHX3,4.p2	AK026902|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13
hg18_v1_chr2_+_182558795_182558993	0.18803	LHX3,4.p2	NM_001080545|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C	AK129898|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C	AF494535|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C	BX647581|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C	BC017943|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C
hg18_v1_chr16_+_22432344_22432623	0.187717	LHX3,4.p2	NM_001135865|LOC100132247|100132247|nuclear pore complex interacting protein related gene	BC036263|NPIPL3|23117|nuclear pore complex interacting protein-like 3	AK296338|LOC100132247|100132247|nuclear pore complex interacting protein related gene
hg18_v1_chr3_-_54937001_54937111	0.183914	LHX3,4.p2	BC074741|LRTM1|57408|leucine-rich repeats and transmembrane domains 1	AF225421|LRTM1|57408|leucine-rich repeats and transmembrane domains 1	NM_020678|LRTM1|57408|leucine-rich repeats and transmembrane domains 1
hg18_v1_chr15_+_72209039_72209052	0.183255	LHX3,4.p2	NM_001130137|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2	BC028042|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2
hg18_v1_chr17_-_46479127_46479269	0.182413	LHX3,4.p2	BC007524|SPAG9|9043|sperm associated antigen 9	BC059946|SPAG9|9043|sperm associated antigen 9	AK299553|SPAG9|9043|sperm associated antigen 9	AK307793|SPAG9|9043|sperm associated antigen 9	AK295098|SPAG9|9043|sperm associated antigen 9	AK309214|SPAG9|9043|sperm associated antigen 9	AK024068|SPAG9|9043|sperm associated antigen 9
hg18_v1_chr17_-_70039187_70039207	0.182225	LHX3,4.p2	DQ893585|CD300LB|124599|CD300 molecule-like family member b	DQ896833|CD300LB|124599|CD300 molecule-like family member b	BC028091|CD300LB|124599|CD300 molecule-like family member b	AK290925|CD300LB|124599|CD300 molecule-like family member b	AK298665|CD300LB|124599|CD300 molecule-like family member b	NM_174892|CD300LB|124599|CD300 molecule-like family member b
hg18_v1_chrX_+_134803450_134803550	0.180992	LHX3,4.p2	AJ278111|SAGE1|55511|sarcoma antigen 1	NM_018666|SAGE1|55511|sarcoma antigen 1	AK310412|SAGE1|55511|sarcoma antigen 1	BC144260|SAGE1|55511|sarcoma antigen 1
hg18_v1_chr17_-_70367479_70367601	0.180931	LHX3,4.p2	BC140801|GRIN2C|2905|glutamate receptor, ionotropic, N-methyl D-aspartate 2C	BC144586|GRIN2C|2905|glutamate receptor, ionotropic, N-methyl D-aspartate 2C	AB208799|GRIN2C|2905|glutamate receptor, ionotropic, N-methyl D-aspartate 2C	NM_000835|GRIN2C|2905|glutamate receptor, ionotropic, N-methyl D-aspartate 2C
hg18_v1_chr8_+_22266256_22266287	0.180615	LHX3,4.p2	AK000397|PIWIL2|55124|piwi-like 2 (Drosophila)
hg18_v1_chr21_-_30460841_30460914	0.179434	LHX3,4.p2	BC101503|CLDN17|26285|claudin 17	BC101505|CLDN17|26285|claudin 17	NM_012131|CLDN17|26285|claudin 17	AY358094|CLDN17|26285|claudin 17
hg18_v1_chr18_+_70352649_70352721	0.17871	LHX3,4.p2	AK308716|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	NM_032649|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	AY358756|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	CR610360|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)
hg18_v1_chr8_-_134156437_134156472	0.176738	LHX3,4.p2	AJ238591|SLA|6503|Src-like-adaptor	AK310108|SLA|6503|Src-like-adaptor	AK310115|SLA|6503|Src-like-adaptor
hg18_v1_chr4_+_35959638_35959645	0.174633	LHX3,4.p2	AK131492|DTHD1|401124|death domain containing 1	NM_001136536|DTHD1|401124|death domain containing 1	AK304357|DTHD1|401124|death domain containing 1	AK316523|DTHD1|401124|death domain containing 1
hg18_v1_chr16_-_79811475_79811475	0.174441	LHX3,4.p2	AY164483|PKD1L2|114780|polycystic kidney disease 1-like 2	NM_001076780|PKD1L2|114780|polycystic kidney disease 1-like 2	NM_052892|PKD1L2|114780|polycystic kidney disease 1-like 2
hg18_v1_chr7_-_104696678_104696761	0.173446	LHX3,4.p2	BC035214|SRPK2|6733|SRSF protein kinase 2	U88666|SRPK2|6733|SRSF protein kinase 2	NM_182691|SRPK2|6733|SRSF protein kinase 2
hg18_v1_chr12_-_53044495_53044539	0.173321	LHX3,4.p2	AF237762|GPR84|53831|G protein-coupled receptor 84	CR611934|GPR84|53831|G protein-coupled receptor 84	AF282693|GPR84|53831|G protein-coupled receptor 84	BC020614|GPR84|53831|G protein-coupled receptor 84	NM_020370|GPR84|53831|G protein-coupled receptor 84	AK290394|GPR84|53831|G protein-coupled receptor 84
hg18_v1_chr11_-_124478414_124478414	0.172747	LHX3,4.p2	NM_001080546|TMEM218|219854|transmembrane protein 218
hg18_v1_chr6_+_73133152_73133205	0.172137	LHX3,4.p2	NM_001168411|RIMS1|22999|regulating synaptic membrane exocytosis 1	AK300853|RIMS1|22999|regulating synaptic membrane exocytosis 1
hg18_v1_chr22_-_38619739_38619739	0.171913	LHX3,4.p2	BC033895|ENTHD1|150350|ENTH domain containing 1	NM_152512|ENTHD1|150350|ENTH domain containing 1
hg18_v1_chr21_-_42219849_42219867	0.170641	LHX3,4.p2	BC062323|C2CD2|25966|C2 calcium-dependent domain containing 2	AL833323|C2CD2|25966|C2 calcium-dependent domain containing 2	NM_199050|C2CD2|25966|C2 calcium-dependent domain containing 2
hg18_v1_chr12_+_18305740_18305740	0.170571	LHX3,4.p2	NM_004570|PIK3C2G|5288|phosphoinositide-3-kinase, class 2, gamma polypeptide
hg18_v1_chr18_-_13905534_13905538	0.169799	LHX3,4.p2	AK315319|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)	BC094710|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)	NM_000529|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)	AK289381|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)
hg18_v1_chr13_-_46368968_46369169	0.16913	LHX3,4.p2	AK314132|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A	BX647777|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A	AK302787|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A	NM_000621|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A	NM_001165947|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A
hg18_v1_chr11_+_123600553_123600607	0.169095	LHX3,4.p2	BC136638|OR8G2|26492|olfactory receptor, family 8, subfamily G, member 2	BC136639|OR8G2|26492|olfactory receptor, family 8, subfamily G, member 2	NM_001007249|OR8G2|26492|olfactory receptor, family 8, subfamily G, member 2
hg18_v1_chr17_-_70039107_70039169	0.168711	LHX3,4.p2	AF427618|CD300LB|124599|CD300 molecule-like family member b	AY359025|CD300LB|124599|CD300 molecule-like family member b	AY646929|CD300LB|124599|CD300 molecule-like family member b
hg18_v1_chr4_-_186969041_186969041	0.168447	LHX3,4.p2	AK293400|SORBS2|8470|sorbin and SH3 domain containing 2	NM_001145672|SORBS2|8470|sorbin and SH3 domain containing 2
hg18_v1_chr11_-_74478405_74478446	0.168032	LHX3,4.p2	NM_001005285|OR2AT4|341152|olfactory receptor, family 2, subfamily AT, member 4	BC136958|OR2AT4|341152|olfactory receptor, family 2, subfamily AT, member 4	BC136959|OR2AT4|341152|olfactory receptor, family 2, subfamily AT, member 4
hg18_v1_chr6_-_31007905_31007930	0.166526	LHX3,4.p2	AY102070|SFTA2|389376|surfactant associated 2	AY359057|SFTA2|389376|surfactant associated 2	BC039677|SFTA2|389376|surfactant associated 2	NM_205854|SFTA2|389376|surfactant associated 2
hg18_v1_chr18_+_59733724_59733724	0.166414	LHX3,4.p2	BC096217|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10	BC096218|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10	BC096219|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10	BC096220|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10	NM_005024|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10	U35459|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10
hg18_v1_chr10_-_48426868_48426990	0.165477	LHX3,4.p2	AY704146|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	AY704149|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	AY704151|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	AY704155|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	BC093750|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	BC113473|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	BC143394|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	BC171725|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	NM_001042357|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	NM_001042389|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A
hg18_v1_chr5_+_36642424_36642547	0.165133	LHX3,4.p2	AK312304|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	BC037310|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK057823|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK293886|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	BC022285|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	BC054475|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK295032|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK295754|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	D26443|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	L19158|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3
hg18_v1_chr1_+_84539876_84539926	0.165092	LHX3,4.p2	NM_001134663|SAMD13|148418|sterile alpha motif domain containing 13
hg18_v1_chr10_-_90601655_90601711	0.164824	LHX3,4.p2	NM_144590|ANKRD22|118932|ankyrin repeat domain 22
hg18_v1_chr2_-_32344192_32344426	0.164408	LHX3,4.p2	AY035391|NLRC4|58484|NLR family, CARD domain containing 4	AY027787|NLRC4|58484|NLR family, CARD domain containing 4	AY027788|NLRC4|58484|NLR family, CARD domain containing 4	AY027789|NLRC4|58484|NLR family, CARD domain containing 4	AY027790|NLRC4|58484|NLR family, CARD domain containing 4	NM_021209|NLRC4|58484|NLR family, CARD domain containing 4	AF376061|NLRC4|58484|NLR family, CARD domain containing 4
hg18_v1_chrX_+_41433169_41433254	0.164301	LHX3,4.p2	AK027780|GPR34|2857|G protein-coupled receptor 34	NM_001097579|GPR34|2857|G protein-coupled receptor 34	NM_005300|GPR34|2857|G protein-coupled receptor 34	DQ106398|GPR34|2857|G protein-coupled receptor 34	CR603494|GPR34|2857|G protein-coupled receptor 34	DQ106400|GPR34|2857|G protein-coupled receptor 34	BC020678|GPR34|2857|G protein-coupled receptor 34	DQ106399|GPR34|2857|G protein-coupled receptor 34	CR609581|GPR34|2857|G protein-coupled receptor 34	DQ106401|GPR34|2857|G protein-coupled receptor 34	DQ106402|GPR34|2857|G protein-coupled receptor 34	AK075217|GPR34|2857|G protein-coupled receptor 34
hg18_v1_chr10_+_63478974_63479230	0.163836	LHX3,4.p2	BC015120|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)	BC066345|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)	AK024803|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)
hg18_v1_chr12_-_10497195_10497245	0.162301	LHX3,4.p2	X54867|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1	X54868|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1	AF461812|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1	NM_002259|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1	NM_007328|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1
hg18_v1_chr5_+_36642213_36642213	0.161103	LHX3,4.p2	NM_001166696|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	NM_004172|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3
hg18_v1_chr10_-_21826192_21826202	0.160986	LHX3,4.p2	BC040880|C10orf114|399726|chromosome 10 open reading frame 114
hg18_v1_chr2_+_216695062_216695162	0.160881	LHX3,4.p2	AK026166|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)
hg18_v1_chr2_+_171280182_171280265	0.160837	LHX3,4.p2	
hg18_v1_chrX_-_24575375_24575386	0.160467	LHX3,4.p2	AK315323|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	NM_001163265|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	NM_004845|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta
hg18_v1_chr2_+_101874809_101875119	0.160285	LHX3,4.p2	BC010909|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	BC040077|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	BC065036|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4
hg18_v1_chr12_+_121218218_121218218	0.159704	LHX3,4.p2	AK124107|LRRC43|254050|leucine rich repeat containing 43	NM_152759|LRRC43|254050|leucine rich repeat containing 43
hg18_v1_chr3_+_195688974_195689208	0.159166	LHX3,4.p2	AK091527|FLJ34208|401106|hypothetical LOC401106
hg18_v1_chr3_-_71860958_71860958	0.158594	LHX3,4.p2	NM_001134650|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3
hg18_v1_chr16_-_70168449_70168498	0.158392	LHX3,4.p2	X55675|TAT|6898|tyrosine aminotransferase	BC130534|TAT|6898|tyrosine aminotransferase	BC020707|TAT|6898|tyrosine aminotransferase	BC022292|TAT|6898|tyrosine aminotransferase	X52520|TAT|6898|tyrosine aminotransferase	AK313380|TAT|6898|tyrosine aminotransferase	NM_000353|TAT|6898|tyrosine aminotransferase
hg18_v1_chrX_+_11221453_11221474	0.157935	LHX3,4.p2	AF436849|AMELX|265|amelogenin, X-linked	BC069118|AMELX|265|amelogenin, X-linked	M86932|AMELX|265|amelogenin, X-linked	NM_001142|AMELX|265|amelogenin, X-linked	NM_182680|AMELX|265|amelogenin, X-linked	NM_182681|AMELX|265|amelogenin, X-linked	BC074951|AMELX|265|amelogenin, X-linked
hg18_v1_chr22_+_42726423_42726505	0.156474	LHX3,4.p2	AF303887|PARVB|29780|parvin, beta	NM_001003828|PARVB|29780|parvin, beta
hg18_v1_chr21_-_30631882_30631882	0.156134	LHX3,4.p2	AB096937|KRTAP27-1|643812|keratin associated protein 27-1	NM_001077711|KRTAP27-1|643812|keratin associated protein 27-1
hg18_v1_chr1_+_115373937_115373937	0.155464	LHX3,4.p2	NM_000549|TSHB|7252|thyroid stimulating hormone, beta
hg18_v1_chrX_-_135783496_135783554	0.155177	LHX3,4.p2	
hg18_v1_chr3_-_152517204_152517325	0.155088	LHX3,4.p2	AF237763|GPR87|53836|G protein-coupled receptor 87	BC112941|GPR87|53836|G protein-coupled receptor 87	BC117565|GPR87|53836|G protein-coupled receptor 87	AB031548|GPR87|53836|G protein-coupled receptor 87	BC132888|GPR87|53836|G protein-coupled receptor 87	BC132890|GPR87|53836|G protein-coupled receptor 87	AK027784|GPR87|53836|G protein-coupled receptor 87	NM_023915|GPR87|53836|G protein-coupled receptor 87
hg18_v1_chr7_-_135263737_135263901	0.154152	LHX3,4.p2	AF130088|LUZP6|767558|leucine zipper protein 6	CR625657|MTPN|136319|myotrophin	CR611568|MTPN|136319|myotrophin	CR599361|MTPN|136319|myotrophin
hg18_v1_chr5_+_137701122_137701185	0.153973	LHX3,4.p2	NM_001135647|FAM53C|51307|family with sequence similarity 53, member C	BC052993|FAM53C|51307|family with sequence similarity 53, member C
hg18_v1_chr6_-_29120930_29120995	0.153473	LHX3,4.p2	BC103870|OR2W1|26692|olfactory receptor, family 2, subfamily W, member 1	BC103871|OR2W1|26692|olfactory receptor, family 2, subfamily W, member 1	BC103872|OR2W1|26692|olfactory receptor, family 2, subfamily W, member 1	NM_030903|OR2W1|26692|olfactory receptor, family 2, subfamily W, member 1
hg18_v1_chr18_-_72857665_72857824	0.152528	LHX3,4.p2	AK074315|MBP|4155|myelin basic protein	CR598393|MBP|4155|myelin basic protein
hg18_v1_chr10_+_24795446_24795454	0.152481	LHX3,4.p2	AK300422|KIAA1217|56243|KIAA1217
hg18_v1_chr10_+_118073929_118073929	0.152345	LHX3,4.p2	BC044830|C10orf96|374355|chromosome 10 open reading frame 96	NM_198515|C10orf96|374355|chromosome 10 open reading frame 96
hg18_v1_chrX_-_76824726_76824936	0.152234	LHX3,4.p2	CR605020|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	U09820|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	AK293241|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked
hg18_v1_chr14_+_77939845_77939845	0.15174	LHX3,4.p2	AB018286|NRXN3|9369|neurexin 3	BC152457|NRXN3|9369|neurexin 3	NM_004796|NRXN3|9369|neurexin 3
hg18_v1_chr13_+_77007809_77007895	0.151174	LHX3,4.p2	NM_001160706|SCEL|8796|sciellin	NM_003843|SCEL|8796|sciellin	NM_144777|SCEL|8796|sciellin	BC020726|SCEL|8796|sciellin	AF045941|SCEL|8796|sciellin	AK025320|SCEL|8796|sciellin	AK222720|SCEL|8796|sciellin	AK301659|SCEL|8796|sciellin
hg18_v1_chr11_+_63282639_63282686	0.150637	LHX3,4.p2	CR596154|RTN3|10313|reticulon 3
hg18_v1_chr20_+_9146036_9146081	0.1502	LHX3,4.p2	NM_182797|PLCB4|5332|phospholipase C, beta 4	BC117458|PLCB4|5332|phospholipase C, beta 4	BC143868|PLCB4|5332|phospholipase C, beta 4
hg18_v1_chr2_-_133895795_133895854	0.148215	LHX3,4.p2	AK092189|NCKAP5|344148|NCK-associated protein 5
hg18_v1_chr17_-_9635325_9635338	0.147558	LHX3,4.p2	NM_001105571|DHRS7C|201140|dehydrogenase/reductase (SDR family) member 7C	BC147024|DHRS7C|201140|dehydrogenase/reductase (SDR family) member 7C	BC147025|DHRS7C|201140|dehydrogenase/reductase (SDR family) member 7C	BC171909|DHRS7C|201140|dehydrogenase/reductase (SDR family) member 7C
hg18_v1_chr4_-_83566045_83566089	0.146953	LHX3,4.p2	
hg18_v1_chr14_-_46882144_46882187	0.146184	LHX3,4.p2	BC028193|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2	NM_182830|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2
hg18_v1_chr10_+_47875229_47875434	0.145458	LHX3,4.p2	AK298761|ANXA8|653145|annexin A8	NM_001040084|ANXA8|653145|annexin A8	BC008813|ANXA8L2|244|annexin A8-like 2	BC073755|ANXA8|653145|annexin A8	Z36830|ANXA8|653145|annexin A8	BC004376|ANXA8|653145|annexin A8	NM_001098845|ANXA8L1|728113|annexin A8-like 1	X16662|ANXA8L2|244|annexin A8-like 2	AK223149|ANXA8L2|244|annexin A8-like 2	AK300139|ANXA8|653145|annexin A8	M81844|ANXA8|653145|annexin A8	DQ893430|ANXA8L2|244|annexin A8-like 2	DQ896775|ANXA8|653145|annexin A8
hg18_v1_chr4_+_88973144_88973163	0.14487	LHX3,4.p2	AK307774|MEPE|56955|matrix extracellular phosphoglycoprotein	NM_001184695|MEPE|56955|matrix extracellular phosphoglycoprotein	NM_001184696|MEPE|56955|matrix extracellular phosphoglycoprotein	NM_001184697|MEPE|56955|matrix extracellular phosphoglycoprotein	NM_020203|MEPE|56955|matrix extracellular phosphoglycoprotein	AJ276396|MEPE|56955|matrix extracellular phosphoglycoprotein	BC128158|MEPE|56955|matrix extracellular phosphoglycoprotein	AF325916|MEPE|56955|matrix extracellular phosphoglycoprotein
hg18_v1_chr8_-_7200278_7200294	0.144864	LHX3,4.p2	AK302471|FAM66B|100128890|family with sequence similarity 66, member B
hg18_v1_chr2_-_80385227_80385245	0.143979	LHX3,4.p2	AK290512|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1
hg18_v1_chr6_+_158654464_158654572	0.143699	LHX3,4.p2	AK304056|TULP4|56995|tubby like protein 4
hg18_v1_chr16_-_4836198_4836211	0.143222	LHX3,4.p2	BC003693|GLYR1|84656|glyoxylate reductase 1 homolog (Arabidopsis)
hg18_v1_chr6_+_158653679_158653691	0.143074	LHX3,4.p2	AB037818|TULP4|56995|tubby like protein 4	AF219946|TULP4|56995|tubby like protein 4	AF288480|TULP4|56995|tubby like protein 4	BC152476|TULP4|56995|tubby like protein 4	NM_001007466|TULP4|56995|tubby like protein 4	NM_020245|TULP4|56995|tubby like protein 4
hg18_v1_chr12_-_9651748_9651778	0.142608	LHX3,4.p2	BC027885|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1	BC113997|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1	BC114516|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1	U11276|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1	NM_002258|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1	AK292022|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1
hg18_v1_chr20_+_23293020_23293020	0.142197	LHX3,4.p2	AB100265|GZF1|64412|GDNF-inducible zinc finger protein 1	BC125188|GZF1|64412|GDNF-inducible zinc finger protein 1	BC154409|GZF1|64412|GDNF-inducible zinc finger protein 1	NM_022482|GZF1|64412|GDNF-inducible zinc finger protein 1
hg18_v1_chrX_+_78313124_78313124	0.142185	LHX3,4.p2	AF345567|GPR174|84636|G protein-coupled receptor 174	BC104922|GPR174|84636|G protein-coupled receptor 174	BC104924|GPR174|84636|G protein-coupled receptor 174	NM_032553|GPR174|84636|G protein-coupled receptor 174
hg18_v1_chr11_+_20577521_20577526	0.141426	LHX3,4.p2	NM_004211|SLC6A5|9152|solute carrier family 6 (neurotransmitter transporter, glycine), member 5	AF085412|SLC6A5|9152|solute carrier family 6 (neurotransmitter transporter, glycine), member 5
hg18_v1_chr7_-_139408808_139409352	0.14127	LHX3,4.p2	AL137255|PARP12|64761|poly (ADP-ribose) polymerase family, member 12	BC044660|PARP12|64761|poly (ADP-ribose) polymerase family, member 12
hg18_v1_chr12_-_44919818_44919942	0.141171	LHX3,4.p2	AK074851|SLC38A1|81539|solute carrier family 38, member 1	DQ891017|SLC38A1|81539|solute carrier family 38, member 1	EU176550|SLC38A1|81539|solute carrier family 38, member 1	AK074949|SLC38A1|81539|solute carrier family 38, member 1	AK313731|SLC38A1|81539|solute carrier family 38, member 1
hg18_v1_chr8_+_124032830_124032931	0.141138	LHX3,4.p2	EU446694|ZHX2|22882|zinc fingers and homeoboxes 2	AB083653|ZHX2|22882|zinc fingers and homeoboxes 2
hg18_v1_chr10_+_124310170_124310262	0.139835	LHX3,4.p2	AF159456|DMBT1|1755|deleted in malignant brain tumors 1	AJ000342|DMBT1|1755|deleted in malignant brain tumors 1	AJ243212|DMBT1|1755|deleted in malignant brain tumors 1	AJ243224|DMBT1|1755|deleted in malignant brain tumors 1	NM_004406|DMBT1|1755|deleted in malignant brain tumors 1	NM_007329|DMBT1|1755|deleted in malignant brain tumors 1	NM_017579|DMBT1|1755|deleted in malignant brain tumors 1	BC153299|DMBT1|1755|deleted in malignant brain tumors 1	AJ297935|DMBT1|1755|deleted in malignant brain tumors 1	AK304149|DMBT1|1755|deleted in malignant brain tumors 1	AK304128|DMBT1|1755|deleted in malignant brain tumors 1
hg18_v1_chr14_-_105997732_105997770	0.139356	LHX3,4.p2	BC092518|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	AK123783|IGHA1|3493|immunoglobulin heavy constant alpha 1	AK097329|IGHA1|3493|immunoglobulin heavy constant alpha 1
hg18_v1_chr7_-_92615593_92615620	0.138111	LHX3,4.p2	AF474973|SAMD9L|219285|sterile alpha motif domain containing 9-like	AY195582|SAMD9L|219285|sterile alpha motif domain containing 9-like	AY195583|SAMD9L|219285|sterile alpha motif domain containing 9-like	AY195584|SAMD9L|219285|sterile alpha motif domain containing 9-like	AY195585|SAMD9L|219285|sterile alpha motif domain containing 9-like	AY195586|SAMD9L|219285|sterile alpha motif domain containing 9-like	AY195587|SAMD9L|219285|sterile alpha motif domain containing 9-like	DQ068177|SAMD9L|219285|sterile alpha motif domain containing 9-like	AB095926|SAMD9L|219285|sterile alpha motif domain containing 9-like	NM_152703|SAMD9L|219285|sterile alpha motif domain containing 9-like
hg18_v1_chr14_-_105523735_105524203	0.136602	LHX3,4.p2	BC080557|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)
hg18_v1_chr1_-_245120900_245120937	0.135173	LHX3,4.p2	AL833491|AHCTF1|25909|AT hook containing transcription factor 1
hg18_v1_chr1_-_150398327_150398327	0.13417	LHX3,4.p2	AY396742|RPTN|126638|repetin	NM_001122965|RPTN|126638|repetin
hg18_v1_chr9_-_21340885_21340885	0.133946	LHX3,4.p2	BC069471|IFNA6|3443|interferon, alpha 6	BC096697|IFNA6|3443|interferon, alpha 6	BC096710|IFNA6|3443|interferon, alpha 6	BC096730|IFNA6|3443|interferon, alpha 6	BC098357|IFNA6|3443|interferon, alpha 6	NM_021002|IFNA6|3443|interferon, alpha 6
hg18_v1_chr10_-_75005421_75005438	0.133812	LHX3,4.p2	AJ583820|USP54|159195|ubiquitin specific peptidase 54	NM_152586|USP54|159195|ubiquitin specific peptidase 54
hg18_v1_chr7_-_158304062_158304201	0.133135	LHX3,4.p2	AK126214|ESYT2|57488|extended synaptotagmin-like protein 2
hg18_v1_chr6_-_133076873_133076889	0.132579	LHX3,4.p2	U39664|VNN1|8876|vanin 1	BC096268|VNN1|8876|vanin 1	AJ132099|VNN1|8876|vanin 1	BC096265|VNN1|8876|vanin 1	BC096266|VNN1|8876|vanin 1	BC096267|VNN1|8876|vanin 1	AK290425|VNN1|8876|vanin 1	AK314265|VNN1|8876|vanin 1	NM_004666|VNN1|8876|vanin 1
hg18_v1_chr5_-_58918031_58918081	0.131179	LHX3,4.p2	U50159|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	NM_006203|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	L20970|PDE4D|5144|phosphodiesterase 4D, cAMP-specific
hg18_v1_chr16_+_2672527_2672657	0.129361	LHX3,4.p2	BC007314|KCTD5|54442|potassium channel tetramerisation domain containing 5
hg18_v1_chr7_+_18515440_18515473	0.129079	LHX3,4.p2	AK304410|HDAC9|9734|histone deacetylase 9
hg18_v1_chrX_-_153903963_153904221	0.128197	LHX3,4.p2	X01179|F8|2157|coagulation factor VIII, procoagulant component	K01740|F8|2157|coagulation factor VIII, procoagulant component	AK292902|F8|2157|coagulation factor VIII, procoagulant component	M14113|F8|2157|coagulation factor VIII, procoagulant component	NM_000132|F8|2157|coagulation factor VIII, procoagulant component	AK307726|F8|2157|coagulation factor VIII, procoagulant component
hg18_v1_chr1_+_50347188_50347355	0.128088	LHX3,4.p2	AY033997|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	BC036071|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	CR613627|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	AY033998|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	M62843|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
hg18_v1_chr4_+_119174947_119175100	0.128077	LHX3,4.p2	AF074924|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	NM_004784|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	BC034037|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	AK295439|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	BC109309|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	BC109310|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3
hg18_v1_chr18_+_28023984_28024006	0.128023	LHX3,4.p2	AY695931|MEP1B|4225|meprin A, beta	NM_005925|MEP1B|4225|meprin A, beta	X81333|MEP1B|4225|meprin A, beta	BC136559|MEP1B|4225|meprin A, beta	BC144244|MEP1B|4225|meprin A, beta
hg18_v1_chr2_+_101874765_101874783	0.127992	LHX3,4.p2	BC045694|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4
hg18_v1_chr1_-_151549790_151549817	0.127799	LHX3,4.p2	BC128114|PGLYRP3|114771|peptidoglycan recognition protein 3	BC128115|PGLYRP3|114771|peptidoglycan recognition protein 3	BC069741|PGLYRP3|114771|peptidoglycan recognition protein 3	BC069798|PGLYRP3|114771|peptidoglycan recognition protein 3	BC069801|PGLYRP3|114771|peptidoglycan recognition protein 3	AY035376|PGLYRP3|114771|peptidoglycan recognition protein 3	NM_052891|PGLYRP3|114771|peptidoglycan recognition protein 3
hg18_v1_chr10_+_24795465_24795485	0.12741	LHX3,4.p2	BX640796|KIAA1217|56243|KIAA1217	BX648451|KIAA1217|56243|KIAA1217	BC098577|KIAA1217|56243|KIAA1217
hg18_v1_chr20_-_45410033_45410076	0.126227	LHX3,4.p2	DQ082998|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ082999|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368669|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368670|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368671|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368672|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368673|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368674|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368675|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368676|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368677|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368678|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368679|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368680|ZMYND8|23613|zinc finger, MYND-type containing 8
hg18_v1_chr2_+_28892366_28892384	0.125669	LHX3,4.p2	NM_001008779|SPDYA|245711|speedy homolog A (Xenopus laevis)	AY820303|SPDYA|245711|speedy homolog A (Xenopus laevis)	AY820304|SPDYA|245711|speedy homolog A (Xenopus laevis)
hg18_v1_chrX_+_55951280_55951389	0.125291	LHX3,4.p2	
hg18_v1_chr12_+_49922592_49922749	0.125168	LHX3,4.p2	CR602531|DAZAP2|9802|DAZ associated protein 2
hg18_v1_chr8_-_110730183_110730307	0.12394	LHX3,4.p2	AL713645|SYBU|55638|syntabulin (syntaxin-interacting)	AB195676|SYBU|55638|syntabulin (syntaxin-interacting)	AB195677|SYBU|55638|syntabulin (syntaxin-interacting)	AB195678|SYBU|55638|syntabulin (syntaxin-interacting)	NM_001099747|SYBU|55638|syntabulin (syntaxin-interacting)	NM_001099748|SYBU|55638|syntabulin (syntaxin-interacting)	NM_001099749|SYBU|55638|syntabulin (syntaxin-interacting)	NM_001099750|SYBU|55638|syntabulin (syntaxin-interacting)	NM_017786|SYBU|55638|syntabulin (syntaxin-interacting)
hg18_v1_chr10_+_126620681_126620681	0.123659	LHX3,4.p2	NM_017580|ZRANB1|54764|zinc finger, RAN-binding domain containing 1
hg18_v1_chr2_+_102401580_102401685	0.123519	LHX3,4.p2	AK300026|IL18RAP|8807|interleukin 18 receptor accessory protein	AF077346|IL18RAP|8807|interleukin 18 receptor accessory protein	NM_003853|IL18RAP|8807|interleukin 18 receptor accessory protein
hg18_v1_chr11_-_5657947_5658037	0.123396	LHX3,4.p2	AB362928|TRIM5|85363|tripartite motif containing 5	AY625000|TRIM5|85363|tripartite motif containing 5	DQ288685|TRIM5|85363|tripartite motif containing 5	AF220025|TRIM5|85363|tripartite motif containing 5	AF220026|TRIM5|85363|tripartite motif containing 5	AF220027|TRIM5|85363|tripartite motif containing 5	AF220028|TRIM5|85363|tripartite motif containing 5	AF220029|TRIM5|85363|tripartite motif containing 5
hg18_v1_chr14_-_105542441_105542783	0.123322	LHX3,4.p2	AB014341|IGLJ3|28831|immunoglobulin lambda joining 3	BC075840|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	BX640724|IGHM|3507|immunoglobulin heavy constant mu	AK097348|IGHA1|3493|immunoglobulin heavy constant alpha 1	AK126543|IGHA1|3493|immunoglobulin heavy constant alpha 1	BX640847|IGHA1|3493|immunoglobulin heavy constant alpha 1
hg18_v1_chr10_+_49279647_49279709	0.123139	LHX3,4.p2	BC130570|MAPK8|5599|mitogen-activated protein kinase 8	BC130572|MAPK8|5599|mitogen-activated protein kinase 8	BC144063|MAPK8|5599|mitogen-activated protein kinase 8	L26318|MAPK8|5599|mitogen-activated protein kinase 8	NM_002750|MAPK8|5599|mitogen-activated protein kinase 8	NM_139046|MAPK8|5599|mitogen-activated protein kinase 8	NM_139047|MAPK8|5599|mitogen-activated protein kinase 8	NM_139049|MAPK8|5599|mitogen-activated protein kinase 8	U35004|MAPK8|5599|mitogen-activated protein kinase 8	U35005|MAPK8|5599|mitogen-activated protein kinase 8	U34822|MAPK8|5599|mitogen-activated protein kinase 8	AB451231|MAPK8|5599|mitogen-activated protein kinase 8	AB451271|MAPK8|5599|mitogen-activated protein kinase 8	AB451354|MAPK8|5599|mitogen-activated protein kinase 8	AB451398|MAPK8|5599|mitogen-activated protein kinase 8	DQ234352|MAPK8|5599|mitogen-activated protein kinase 8
hg18_v1_chr17_-_7159094_7159388	0.122616	LHX3,4.p2	BT006998|GPS2|2874|G protein pathway suppressor 2	CR541723|GPS2|2874|G protein pathway suppressor 2	CR541750|GPS2|2874|G protein pathway suppressor 2	CR604106|GPS2|2874|G protein pathway suppressor 2	BC014192|GPS2|2874|G protein pathway suppressor 2	BC013652|GPS2|2874|G protein pathway suppressor 2	NM_004489|GPS2|2874|G protein pathway suppressor 2
hg18_v1_chr9_-_92444886_92444992	0.1226	LHX3,4.p2	BC008065|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2	AK124628|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2	AK122986|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2	NM_017594|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2
hg18_v1_chr4_+_69465107_69465148	0.122134	LHX3,4.p2	AK313859|TMPRSS11E|28983|transmembrane protease, serine 11E	NM_014058|TMPRSS11E|28983|transmembrane protease, serine 11E	AF064819|TMPRSS11E|28983|transmembrane protease, serine 11E	AK292787|TMPRSS11E|28983|transmembrane protease, serine 11E	AY359017|TMPRSS11E|28983|transmembrane protease, serine 11E	BC113412|TMPRSS11E|28983|transmembrane protease, serine 11E	BC113414|TMPRSS11E|28983|transmembrane protease, serine 11E
hg18_v1_chr11_-_57964221_57964221	0.121854	LHX3,4.p2	BC136947|OR5B12|390191|olfactory receptor, family 5, subfamily B, member 12	BC136948|OR5B12|390191|olfactory receptor, family 5, subfamily B, member 12	NM_001004733|OR5B12|390191|olfactory receptor, family 5, subfamily B, member 12
hg18_v1_chr13_+_108046500_108046530	0.120543	LHX3,4.p2	AB020672|MYO16|23026|myosin XVI	BC146791|MYO16|23026|myosin XVI	NM_015011|MYO16|23026|myosin XVI	AL834447|MYO16|23026|myosin XVI
hg18_v1_chr4_-_72868598_72868805	0.117629	LHX3,4.p2	CR624576|GC|2638|group-specific component (vitamin D binding protein)	CR615579|GC|2638|group-specific component (vitamin D binding protein)	CR592599|GC|2638|group-specific component (vitamin D binding protein)	CR597042|GC|2638|group-specific component (vitamin D binding protein)	CR600650|GC|2638|group-specific component (vitamin D binding protein)	CR615455|GC|2638|group-specific component (vitamin D binding protein)	CR618111|GC|2638|group-specific component (vitamin D binding protein)	CR589987|GC|2638|group-specific component (vitamin D binding protein)	CR604515|GC|2638|group-specific component (vitamin D binding protein)	CR615226|GC|2638|group-specific component (vitamin D binding protein)	CR625283|GC|2638|group-specific component (vitamin D binding protein)	CR593132|GC|2638|group-specific component (vitamin D binding protein)	CR612125|GC|2638|group-specific component (vitamin D binding protein)	CR625359|GC|2638|group-specific component (vitamin D binding protein)	CR626806|GC|2638|group-specific component (vitamin D binding protein)	CR605798|GC|2638|group-specific component (vitamin D binding protein)	CR611556|GC|2638|group-specific component (vitamin D binding protein)	CR623633|GC|2638|group-specific component (vitamin D binding protein)	CR591786|GC|2638|group-specific component (vitamin D binding protein)	CR598387|GC|2638|group-specific component (vitamin D binding protein)	CR599900|GC|2638|group-specific component (vitamin D binding protein)	CR600738|GC|2638|group-specific component (vitamin D binding protein)	CR601461|GC|2638|group-specific component (vitamin D binding protein)	CR606955|GC|2638|group-specific component (vitamin D binding protein)	CR622285|GC|2638|group-specific component (vitamin D binding protein)	CR591437|GC|2638|group-specific component (vitamin D binding protein)	AK290827|GC|2638|group-specific component (vitamin D binding protein)	AK298433|GC|2638|group-specific component (vitamin D binding protein)	AK312971|GC|2638|group-specific component (vitamin D binding protein)	BC057228|GC|2638|group-specific component (vitamin D binding protein)	BC022310|GC|2638|group-specific component (vitamin D binding protein)	NM_000583|GC|2638|group-specific component (vitamin D binding protein)	X03178|GC|2638|group-specific component (vitamin D binding protein)	CR602970|GC|2638|group-specific component (vitamin D binding protein)	AK315853|GC|2638|group-specific component (vitamin D binding protein)
hg18_v1_chr7_-_26198673_26198679	0.11746	LHX3,4.p2	BX538099|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1
hg18_v1_chrX_+_79562601_79562635	0.117126	LHX3,4.p2	BX537938|FAM46D|169966|family with sequence similarity 46, member D	NM_152630|FAM46D|169966|family with sequence similarity 46, member D	BC030784|FAM46D|169966|family with sequence similarity 46, member D	AK313875|FAM46D|169966|family with sequence similarity 46, member D	BC028710|FAM46D|169966|family with sequence similarity 46, member D	BC034979|FAM46D|169966|family with sequence similarity 46, member D
hg18_v1_chr2_+_102456193_102456193	0.117101	LHX3,4.p2	CR627411|SLC9A4|389015|solute carrier family 9 (sodium/hydrogen exchanger), member 4	NM_001011552|SLC9A4|389015|solute carrier family 9 (sodium/hydrogen exchanger), member 4
hg18_v1_chr15_+_89212888_89212888	0.116854	LHX3,4.p2	NM_002569|FURIN|5045|furin (paired basic amino acid cleaving enzyme)	X17094|FURIN|5045|furin (paired basic amino acid cleaving enzyme)
hg18_v1_chr3_+_152934393_152934404	0.116838	LHX3,4.p2	BX647585|AADACL2|344752|arylacetamide deacetylase-like 2	NM_207365|AADACL2|344752|arylacetamide deacetylase-like 2	BC065724|AADACL2|344752|arylacetamide deacetylase-like 2
hg18_v1_chr11_+_55351270_55351270	0.116485	LHX3,4.p2	NM_001004739|OR5L2|26338|olfactory receptor, family 5, subfamily L, member 2
hg18_v1_chr15_+_56217686_56217871	0.116256	LHX3,4.p2	AK300055|AQP9|366|aquaporin 9	NM_020980|AQP9|366|aquaporin 9	AK313214|AQP9|366|aquaporin 9	AF016495|AQP9|366|aquaporin 9	AB008775|AQP9|366|aquaporin 9	BC026258|AQP9|366|aquaporin 9
hg18_v1_chr12_+_79625538_79625629	0.116082	LHX3,4.p2	NM_002469|MYF6|4618|myogenic factor 6 (herculin)	AK313287|MYF6|4618|myogenic factor 6 (herculin)	X52011|MYF6|4618|myogenic factor 6 (herculin)	BC017834|MYF6|4618|myogenic factor 6 (herculin)	DQ893248|MYF6|4618|myogenic factor 6 (herculin)	DQ896577|MYF6|4618|myogenic factor 6 (herculin)	CR407641|MYF6|4618|myogenic factor 6 (herculin)	CR541763|MYF6|4618|myogenic factor 6 (herculin)
hg18_v1_chr21_+_42697058_42697123	0.115962	LHX3,4.p2	AK313367|UBASH3A|53347|ubiquitin associated and SH3 domain containing A	AK301279|UBASH3A|53347|ubiquitin associated and SH3 domain containing A	BC028138|UBASH3A|53347|ubiquitin associated and SH3 domain containing A	NM_001001895|UBASH3A|53347|ubiquitin associated and SH3 domain containing A	NM_018961|UBASH3A|53347|ubiquitin associated and SH3 domain containing A	AJ277750|UBASH3A|53347|ubiquitin associated and SH3 domain containing A	BC069357|UBASH3A|53347|ubiquitin associated and SH3 domain containing A	BC069483|UBASH3A|53347|ubiquitin associated and SH3 domain containing A	BC069577|UBASH3A|53347|ubiquitin associated and SH3 domain containing A	BC069511|UBASH3A|53347|ubiquitin associated and SH3 domain containing A	AK308151|UBASH3A|53347|ubiquitin associated and SH3 domain containing A	AF520809|UBASH3A|53347|ubiquitin associated and SH3 domain containing A	AF521702|UBASH3A|53347|ubiquitin associated and SH3 domain containing A
hg18_v1_chr7_-_86526880_86526949	0.115811	LHX3,4.p2	NM_001142749|KIAA1324L|222223|KIAA1324-like
hg18_v1_chr17_-_44010543_44010741	0.115614	LHX3,4.p2	AL137449|HOXB4|3214|homeobox B4	BC049204|HOXB4|3214|homeobox B4	NM_024015|HOXB4|3214|homeobox B4
hg18_v1_chr11_+_128068982_128069034	0.115469	LHX3,4.p2	NM_002017|FLI1|2313|Friend leukemia virus integration 1
hg18_v1_chr3_+_133518966_133518990	0.115454	LHX3,4.p2	M24902|ACPP|55|acid phosphatase, prostate	X52174|ACPP|55|acid phosphatase, prostate	M34840|ACPP|55|acid phosphatase, prostate	DQ893148|ACPP|55|acid phosphatase, prostate	DQ896443|ACPP|55|acid phosphatase, prostate	AB102888|ACPP|55|acid phosphatase, prostate
hg18_v1_chr17_+_12510030_12510062	0.114533	LHX3,4.p2	AK128608|MYOCD|93649|myocardin	AK292885|MYOCD|93649|myocardin
hg18_v1_chr10_-_21826211_21826252	0.114459	LHX3,4.p2	NM_001010911|C10orf114|399726|chromosome 10 open reading frame 114
hg18_v1_chr4_+_113437947_113438006	0.113985	LHX3,4.p2	NM_001102406|ALPK1|80216|alpha-kinase 1	NM_025144|ALPK1|80216|alpha-kinase 1	AK026323|ALPK1|80216|alpha-kinase 1	AK304708|ALPK1|80216|alpha-kinase 1	AK097246|ALPK1|80216|alpha-kinase 1	BC028117|ALPK1|80216|alpha-kinase 1	AK303489|ALPK1|80216|alpha-kinase 1	BX648798|ALPK1|80216|alpha-kinase 1	BC060780|ALPK1|80216|alpha-kinase 1
hg18_v1_chr13_-_109236897_109236922	0.113896	LHX3,4.p2	NM_003749|IRS2|8660|insulin receptor substrate 2	AF073310|IRS2|8660|insulin receptor substrate 2
hg18_v1_chr11_+_59580630_59580695	0.113531	LHX3,4.p2	NM_001031666|MS4A3|932|membrane-spanning 4-domains, subfamily A, member 3 (hematopoietic cell-specific)	NM_001031809|MS4A3|932|membrane-spanning 4-domains, subfamily A, member 3 (hematopoietic cell-specific)	NM_006138|MS4A3|932|membrane-spanning 4-domains, subfamily A, member 3 (hematopoietic cell-specific)
hg18_v1_chr19_-_55104875_55104954	0.112566	LHX3,4.p2	CR541721|NUP62|23636|nucleoporin 62kDa	AM393785|NUP62|23636|nucleoporin 62kDa	DQ892591|NUP62|23636|nucleoporin 62kDa	DQ896857|NUP62|23636|nucleoporin 62kDa	BC014842|NUP62|23636|nucleoporin 62kDa
hg18_v1_chr8_-_102872614_102872614	0.112364	LHX3,4.p2	NM_032041|NCALD|83988|neurocalcin delta
hg18_v1_chr14_+_51025604_51025604	0.112359	LHX3,4.p2	AL833158|FRMD6|122786|FERM domain containing 6	NM_001042481|FRMD6|122786|FERM domain containing 6
hg18_v1_chr5_+_166644420_166644420	0.110276	LHX3,4.p2	NM_001122679|ODZ2|57451|odz, odd Oz/ten-m homolog 2 (Drosophila)
hg18_v1_chr17_+_63338500_63338579	0.110118	LHX3,4.p2	AK025776|BPTF|2186|bromodomain PHD finger transcription factor
hg18_v1_chr2_+_234624084_234624169	0.109234	LHX3,4.p2	AJ308099|SPP2|6694|secreted phosphoprotein 2, 24kDa	NM_006944|SPP2|6694|secreted phosphoprotein 2, 24kDa	BC069401|SPP2|6694|secreted phosphoprotein 2, 24kDa	BC106705|SPP2|6694|secreted phosphoprotein 2, 24kDa	BC112438|SPP2|6694|secreted phosphoprotein 2, 24kDa	BC113972|SPP2|6694|secreted phosphoprotein 2, 24kDa	U20530|SPP2|6694|secreted phosphoprotein 2, 24kDa
hg18_v1_chr4_+_160408447_160408447	0.109183	LHX3,4.p2	AK294459|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2	NM_014247|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2
hg18_v1_chr1_+_50347176_50347181	0.109173	LHX3,4.p2	NM_001144774|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	NM_021952|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
hg18_v1_chr1_-_156635879_156635879	0.109154	LHX3,4.p2	NM_001004475|OR10T2|128360|olfactory receptor, family 10, subfamily T, member 2
hg18_v1_chr10_+_90511142_90511142	0.108142	LHX3,4.p2	EF426483|LIPN|643418|lipase, family member N	NM_001102469|LIPN|643418|lipase, family member N
hg18_v1_chr6_+_43097352_43097379	0.107941	LHX3,4.p2	AK313816|RRP36|88745|ribosomal RNA processing 36 homolog (S. cerevisiae)	BC006293|RRP36|88745|ribosomal RNA processing 36 homolog (S. cerevisiae)	BC011933|RRP36|88745|ribosomal RNA processing 36 homolog (S. cerevisiae)	NM_033112|RRP36|88745|ribosomal RNA processing 36 homolog (S. cerevisiae)
hg18_v1_chr16_+_2672476_2672525	0.107662	LHX3,4.p2	NM_018992|KCTD5|54442|potassium channel tetramerisation domain containing 5	AK000047|KCTD5|54442|potassium channel tetramerisation domain containing 5
hg18_v1_chrX_+_14457340_14457403	0.107575	LHX3,4.p2	AK312591|GLRA2|2742|glycine receptor, alpha 2	NM_001118885|GLRA2|2742|glycine receptor, alpha 2	NM_001118886|GLRA2|2742|glycine receptor, alpha 2	NM_001171942|GLRA2|2742|glycine receptor, alpha 2	NM_002063|GLRA2|2742|glycine receptor, alpha 2	AK297304|GLRA2|2742|glycine receptor, alpha 2
hg18_v1_chr4_-_120462705_120462763	0.107043	LHX3,4.p2	AK025079|FABP2|2169|fatty acid binding protein 2, intestinal	BC069617|FABP2|2169|fatty acid binding protein 2, intestinal	BC069466|FABP2|2169|fatty acid binding protein 2, intestinal	BC069625|FABP2|2169|fatty acid binding protein 2, intestinal	BC069637|FABP2|2169|fatty acid binding protein 2, intestinal	BC111791|FABP2|2169|fatty acid binding protein 2, intestinal	NM_000134|FABP2|2169|fatty acid binding protein 2, intestinal
hg18_v1_chrX_-_27909486_27909486	0.106949	LHX3,4.p2	AK128123|DCAF8L1|139425|DDB1 and CUL4 associated factor 8-like 1	NM_001017930|DCAF8L1|139425|DDB1 and CUL4 associated factor 8-like 1
hg18_v1_chr17_+_53670785_53671063	0.106721	LHX3,4.p2	NM_001160102|LPO|4025|lactoperoxidase	NM_006151|LPO|4025|lactoperoxidase	BC107166|LPO|4025|lactoperoxidase	BC107167|LPO|4025|lactoperoxidase	BX648309|LPO|4025|lactoperoxidase	AK303903|LPO|4025|lactoperoxidase	U39573|LPO|4025|lactoperoxidase	AK310965|LPO|4025|lactoperoxidase	AK300653|LPO|4025|lactoperoxidase	AK308378|LPO|4025|lactoperoxidase	AK131496|LPO|4025|lactoperoxidase	EF579964|LPO|4025|lactoperoxidase
hg18_v1_chr8_-_102005697_102005703	0.105507	LHX3,4.p2	DQ185048|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide
hg18_v1_chr11_-_5819702_5819702	0.105418	LHX3,4.p2	NM_001005167|OR52E6|390078|olfactory receptor, family 52, subfamily E, member 6
hg18_v1_chr5_-_13997588_13997588	0.103795	LHX3,4.p2	AY045575|DNAH5|1767|dynein, axonemal, heavy chain 5	NM_001369|DNAH5|1767|dynein, axonemal, heavy chain 5
hg18_v1_chr4_-_83566246_83566273	0.103609	LHX3,4.p2	X75683|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like
hg18_v1_chr3_+_120799411_120799450	0.103083	LHX3,4.p2	AK301880|PLA1A|51365|phospholipase A1 member A	NM_015900|PLA1A|51365|phospholipase A1 member A	AK222705|PLA1A|51365|phospholipase A1 member A	AK313519|PLA1A|51365|phospholipase A1 member A	BC035347|PLA1A|51365|phospholipase A1 member A	BC047703|PLA1A|51365|phospholipase A1 member A	U37591|PLA1A|51365|phospholipase A1 member A	AF035268|PLA1A|51365|phospholipase A1 member A	AF035269|PLA1A|51365|phospholipase A1 member A
hg18_v1_chr11_+_22646229_22646229	0.102676	LHX3,4.p2	BC013326|GAS2|2620|growth arrest-specific 2	BC040470|GAS2|2620|growth arrest-specific 2	NM_177553|GAS2|2620|growth arrest-specific 2
hg18_v1_chr6_-_31853027_31853086	0.10254	LHX3,4.p2	AK304058|C6orf27|80737|chromosome 6 open reading frame 27	NM_025258|C6orf27|80737|chromosome 6 open reading frame 27
hg18_v1_chr3_-_109730858_109730858	0.102378	LHX3,4.p2	AB023217|MYH15|22989|myosin, heavy chain 15	NM_014981|MYH15|22989|myosin, heavy chain 15
hg18_v1_chr4_-_177353707_177353815	0.10201	LHX3,4.p2	BC021731|SPATA4|132851|spermatogenesis associated 4	BC029428|SPATA4|132851|spermatogenesis associated 4	AY040204|SPATA4|132851|spermatogenesis associated 4	NM_144644|SPATA4|132851|spermatogenesis associated 4
hg18_v1_chr6_-_33879734_33879770	0.101515	LHX3,4.p2	BC112314|MLN|4295|motilin	BC143981|MLN|4295|motilin	Y00695|MLN|4295|motilin	BC069675|MLN|4295|motilin	NM_001040109|MLN|4295|motilin	NM_001184698|MLN|4295|motilin	NM_002418|MLN|4295|motilin
hg18_v1_chr3_+_99288706_99288706	0.101233	LHX3,4.p2	NM_054106|OR5AC2|81050|olfactory receptor, family 5, subfamily AC, member 2
hg18_v1_chr2_-_172675873_172675878	0.101169	LHX3,4.p2	AK291367|DLX2|1746|distal-less homeobox 2	AK316129|DLX2|1746|distal-less homeobox 2
hg18_v1_chr8_-_95289945_95289995	0.101123	LHX3,4.p2	U07969|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)	BC112013|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)	BC113464|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)	X83228|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)	AK301001|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)	NM_004063|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)
hg18_v1_chr3_-_33675484_33675616	0.100071	LHX3,4.p2	AB014527|CLASP2|23122|cytoplasmic linker associated protein 2
hg18_v1_chr17_-_2250967_2251165	0.0999807	LHX3,4.p2	X96401|MNT|4335|MAX binding protein	NM_020310|MNT|4335|MAX binding protein	AK291596|MNT|4335|MAX binding protein
hg18_v1_chr1_+_50342168_50342168	0.0998605	LHX3,4.p2	AY033995|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	NM_001144776|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
hg18_v1_chr9_+_117955890_117955892	0.0997446	LHX3,4.p2	NM_002581|PAPPA|5069|pregnancy-associated plasma protein A, pappalysin 1
hg18_v1_chr1_+_100089118_100089186	0.0994861	LHX3,4.p2	NM_000646|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	U84011|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	AB208867|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase
hg18_v1_chr12_+_15590552_15590552	0.0992809	LHX3,4.p2	AF152378|PTPRO|5800|protein tyrosine phosphatase, receptor type, O	AF187042|PTPRO|5800|protein tyrosine phosphatase, receptor type, O	AF187043|PTPRO|5800|protein tyrosine phosphatase, receptor type, O	AF187044|PTPRO|5800|protein tyrosine phosphatase, receptor type, O	NM_030668|PTPRO|5800|protein tyrosine phosphatase, receptor type, O	NM_030669|PTPRO|5800|protein tyrosine phosphatase, receptor type, O	NM_030670|PTPRO|5800|protein tyrosine phosphatase, receptor type, O	NM_030671|PTPRO|5800|protein tyrosine phosphatase, receptor type, O
hg18_v1_chr14_+_95915774_95915774	0.0989989	LHX3,4.p2	BC004818|C14orf129|51527|chromosome 14 open reading frame 129	NM_016472|C14orf129|51527|chromosome 14 open reading frame 129
hg18_v1_chr12_+_48443232_48443347	0.0989215	LHX3,4.p2	CR624817|TMBIM6|7009|transmembrane BAX inhibitor motif containing 6	AK026605|TMBIM6|7009|transmembrane BAX inhibitor motif containing 6
hg18_v1_chr10_+_129237602_129237602	0.0986367	LHX3,4.p2	NM_001030013|NPS|594857|neuropeptide S
hg18_v1_chr12_+_53901075_53901075	0.097585	LHX3,4.p2	NM_001005280|OR10A7|121364|olfactory receptor, family 10, subfamily A, member 7
hg18_v1_chr12_+_74071116_74071137	0.0974574	LHX3,4.p2	BC016749|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2	AK093175|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2
hg18_v1_chr9_+_80134302_80134349	0.097443	LHX3,4.p2	CR619649|PSAT1|29968|phosphoserine aminotransferase 1
hg18_v1_chr12_-_26169074_26169303	0.0966813	LHX3,4.p2	AY665467|BHLHE41|79365|basic helix-loop-helix family, member e41	AK303677|BHLHE41|79365|basic helix-loop-helix family, member e41	AB044088|BHLHE41|79365|basic helix-loop-helix family, member e41	BC025968|BHLHE41|79365|basic helix-loop-helix family, member e41	NM_030762|BHLHE41|79365|basic helix-loop-helix family, member e41
hg18_v1_chr1_+_151270301_151270304	0.0959281	LHX3,4.p2	M19888|SPRR1B|6699|small proline-rich protein 1B	BC056240|SPRR1B|6699|small proline-rich protein 1B	M21300|SPRR1B|6699|small proline-rich protein 1B	NM_003125|SPRR1B|6699|small proline-rich protein 1B	M21301|SPRR1B|6699|small proline-rich protein 1B
hg18_v1_chrX_-_138875342_138875342	0.0954876	LHX3,4.p2	BC137148|CXorf66|347487|chromosome X open reading frame 66	BC137149|CXorf66|347487|chromosome X open reading frame 66	NM_001013403|CXorf66|347487|chromosome X open reading frame 66
hg18_v1_chr11_-_18913121_18913124	0.0944242	LHX3,4.p2	BC096835|MRGPRX1|259249|MAS-related GPR, member X1	NM_147199|MRGPRX1|259249|MAS-related GPR, member X1
hg18_v1_chr1_+_64442077_64442077	0.0935663	LHX3,4.p2	BC029895|UBE2U|148581|ubiquitin-conjugating enzyme E2U (putative)	NM_152489|UBE2U|148581|ubiquitin-conjugating enzyme E2U (putative)
hg18_v1_chr3_-_135131207_135131345	0.0935659	LHX3,4.p2	AK025826|C3orf36|80111|chromosome 3 open reading frame 36	AK225383|C3orf36|80111|chromosome 3 open reading frame 36	BC051274|C3orf36|80111|chromosome 3 open reading frame 36	BC064502|C3orf36|80111|chromosome 3 open reading frame 36	BC082257|C3orf36|80111|chromosome 3 open reading frame 36	NM_025041|C3orf36|80111|chromosome 3 open reading frame 36
hg18_v1_chr20_+_31268779_31268818	0.0931658	LHX3,4.p2	BC041904|C20orf71|128861|chromosome 20 open reading frame 71	NM_001042439|C20orf71|128861|chromosome 20 open reading frame 71	NM_178466|C20orf71|128861|chromosome 20 open reading frame 71	BC066354|C20orf71|128861|chromosome 20 open reading frame 71
hg18_v1_chr4_+_102954005_102954058	0.0931523	LHX3,4.p2	NM_001083907|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1	AK000713|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1
hg18_v1_chr9_+_79158164_79158172	0.0928238	LHX3,4.p2	AK027023|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)
hg18_v1_chr3_+_158026769_158026841	0.0924639	LHX3,4.p2	AK094480|LEKR1|389170|leucine, glutamate and lysine rich 1	AK131473|LEKR1|389170|leucine, glutamate and lysine rich 1	NM_001004316|LEKR1|389170|leucine, glutamate and lysine rich 1	BC041967|LEKR1|389170|leucine, glutamate and lysine rich 1	NM_001193283|LEKR1|389170|leucine, glutamate and lysine rich 1
hg18_v1_chr11_+_6854431_6854454	0.0923578	LHX3,4.p2	BC137024|OR10A4|283297|olfactory receptor, family 10, subfamily A, member 4	BC137027|OR10A4|283297|olfactory receptor, family 10, subfamily A, member 4	NM_207186|OR10A4|283297|olfactory receptor, family 10, subfamily A, member 4	AF209506|OR10A4|283297|olfactory receptor, family 10, subfamily A, member 4
hg18_v1_chr10_+_102212787_102212804	0.0916409	LHX3,4.p2	Y11094|WNT8B|7479|wingless-type MMTV integration site family, member 8B	NM_003393|WNT8B|7479|wingless-type MMTV integration site family, member 8B	AB073637|WNT8B|7479|wingless-type MMTV integration site family, member 8B
hg18_v1_chrX_-_24575146_24575346	0.0915223	LHX3,4.p2	AF148464|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	AF052510|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	CR618952|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta
hg18_v1_chr11_-_66898223_66898223	0.0912382	LHX3,4.p2	AK298052|CLCF1|23529|cardiotrophin-like cytokine factor 1	NM_001166212|CLCF1|23529|cardiotrophin-like cytokine factor 1
hg18_v1_chr14_-_94669547_94669592	0.0911227	LHX3,4.p2	HM595745|DICER1|23405|dicer 1, ribonuclease type III	NM_001195573|DICER1|23405|dicer 1, ribonuclease type III
hg18_v1_chr15_-_48345453_48345453	0.0904278	LHX3,4.p2	AK308833|HDC|3067|histidine decarboxylase	NM_002112|HDC|3067|histidine decarboxylase
hg18_v1_chr2_-_95514205_95514211	0.0901948	LHX3,4.p2	NM_001164464|TRIM43B|653192|tripartite motif containing 43B	BC015353|TRIM43|129868|tripartite motif containing 43
hg18_v1_chr17_-_64752550_64752581	0.0901305	LHX3,4.p2	AY028900|ABCA10|10349|ATP-binding cassette, sub-family A (ABC1), member 10	NM_080282|ABCA10|10349|ATP-binding cassette, sub-family A (ABC1), member 10	AY247065|ABCA10|10349|ATP-binding cassette, sub-family A (ABC1), member 10
hg18_v1_chr3_+_179736917_179736917	0.089773	LHX3,4.p2	BC017825|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2	NM_181361|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2
hg18_v1_chr6_+_158990982_158991103	0.089177	LHX3,4.p2	NM_001009991|SYTL3|94120|synaptotagmin-like 3	AK092729|SYTL3|94120|synaptotagmin-like 3	AK298712|SYTL3|94120|synaptotagmin-like 3	BC085612|SYTL3|94120|synaptotagmin-like 3
hg18_v1_chr14_+_87541220_87541286	0.0888426	LHX3,4.p2	NM_003608|GPR65|8477|G protein-coupled receptor 65	AK313797|GPR65|8477|G protein-coupled receptor 65	BC035633|GPR65|8477|G protein-coupled receptor 65	BC071715|GPR65|8477|G protein-coupled receptor 65
hg18_v1_chr11_-_117589283_117589283	0.0887293	LHX3,4.p2	AK094399|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1	NM_153206|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1
hg18_v1_chr2_-_227737009_227737284	0.0887129	LHX3,4.p2	X81053|COL4A4|1286|collagen, type IV, alpha 4
hg18_v1_chr15_-_64108718_64108777	0.0885891	LHX3,4.p2	
hg18_v1_chr19_+_3713671_3713677	0.0883086	LHX3,4.p2	BC065273|MRPL54|116541|mitochondrial ribosomal protein L54
hg18_v1_chr1_+_35623688_35623720	0.0882075	LHX3,4.p2	BX648067|ZMYM4|9202|zinc finger, MYM-type 4
hg18_v1_chr21_-_35153664_35153748	0.0878544	LHX3,4.p2	S76350|RUNX1|861|runt-related transcription factor 1
hg18_v1_chr3_+_35658852_35658852	0.0878268	LHX3,4.p2	BC051828|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	NM_016300|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa
hg18_v1_chr9_-_21295311_21295311	0.0877688	LHX3,4.p2	BC093755|IFNA5|3442|interferon, alpha 5	BC093757|IFNA5|3442|interferon, alpha 5	NM_002169|IFNA5|3442|interferon, alpha 5
hg18_v1_chr9_+_6231677_6231694	0.0874931	LHX3,4.p2	NM_033439|IL33|90865|interleukin 33	AB024518|IL33|90865|interleukin 33	AY905581|IL33|90865|interleukin 33	CR407619|IL33|90865|interleukin 33
hg18_v1_chr15_+_22781292_22781342	0.0861778	LHX3,4.p2	AF019618|PAR5|8123|Prader-Willi/Angelman syndrome-5
hg18_v1_chr20_+_29526751_29526774	0.0860044	LHX3,4.p2	AK313060|REM1|28954|RAS (RAD and GEM)-like GTP-binding 1	CR626669|REM1|28954|RAS (RAD and GEM)-like GTP-binding 1	BC039813|REM1|28954|RAS (RAD and GEM)-like GTP-binding 1	NM_014012|REM1|28954|RAS (RAD and GEM)-like GTP-binding 1	AF152863|REM1|28954|RAS (RAD and GEM)-like GTP-binding 1	CR598485|REM1|28954|RAS (RAD and GEM)-like GTP-binding 1
hg18_v1_chr17_-_36347197_36347361	0.0855679	LHX3,4.p2	BC028356|KRT23|25984|keratin 23 (histone deacetylase inducible)	AK302109|KRT23|25984|keratin 23 (histone deacetylase inducible)	AL117538|KRT23|25984|keratin 23 (histone deacetylase inducible)	NM_015515|KRT23|25984|keratin 23 (histone deacetylase inducible)
hg18_v1_chr1_-_23998515_23998646	0.0855221	LHX3,4.p2	CR602422|GALE|2582|UDP-galactose-4-epimerase	AK314397|GALE|2582|UDP-galactose-4-epimerase	NM_001127621|GALE|2582|UDP-galactose-4-epimerase
hg18_v1_chr6_-_22405708_22405708	0.0853389	LHX3,4.p2	BC015850|PRL|5617|prolactin	NM_000948|PRL|5617|prolactin
hg18_v1_chr3_-_112796855_112796855	0.0852335	LHX3,4.p2	NM_024508|ZBED2|79413|zinc finger, BED-type containing 2
hg18_v1_chr3_+_39399770_39400219	0.0851886	LHX3,4.p2	NM_017875|SLC25A38|54977|solute carrier family 25, member 38	AK000558|SLC25A38|54977|solute carrier family 25, member 38	AK225388|SLC25A38|54977|solute carrier family 25, member 38	CR614324|SLC25A38|54977|solute carrier family 25, member 38	CR619847|SLC25A38|54977|solute carrier family 25, member 38	CR591050|SLC25A38|54977|solute carrier family 25, member 38	BC013194|SLC25A38|54977|solute carrier family 25, member 38	CR457242|SLC25A38|54977|solute carrier family 25, member 38
hg18_v1_chr9_-_34719463_34719534	0.0848753	LHX3,4.p2	AK302320|C9orf144B|259308|transmembrane protein C9orf144B	NM_001141917|C9orf144B|259308|transmembrane protein C9orf144B
hg18_v1_chr5_+_140757787_140757878	0.0848168	LHX3,4.p2	BC093877|PCDHGB5|56101|protocadherin gamma subfamily B, 5	BC093879|PCDHGB5|56101|protocadherin gamma subfamily B, 5	AF152334|PCDHGB5|56101|protocadherin gamma subfamily B, 5	AF152521|PCDHGB5|56101|protocadherin gamma subfamily B, 5	NM_018925|PCDHGB5|56101|protocadherin gamma subfamily B, 5	NM_032099|PCDHGB5|56101|protocadherin gamma subfamily B, 5
hg18_v1_chr11_-_123758448_123758448	0.0842751	LHX3,4.p2	NM_001005468|OR8B2|26595|olfactory receptor, family 8, subfamily B, member 2
hg18_v1_chr4_-_103464491_103464491	0.0834128	LHX3,4.p2	AK027652|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8	NM_001135148|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8
hg18_v1_chr21_-_26294332_26294369	0.082682	LHX3,4.p2	X06981|APP|351|amyloid beta (A4) precursor protein	X06982|APP|351|amyloid beta (A4) precursor protein
hg18_v1_chrX_+_50044279_50044279	0.0826673	LHX3,4.p2	AJ314764|CCNB3|85417|cyclin B3	AJ314765|CCNB3|85417|cyclin B3	AJ314766|CCNB3|85417|cyclin B3	AJ416458|CCNB3|85417|cyclin B3	NM_033031|CCNB3|85417|cyclin B3	NM_033670|CCNB3|85417|cyclin B3
hg18_v1_chr3_+_161040343_161040432	0.0824507	LHX3,4.p2	NM_001197109|SCHIP1|29970|schwannomin interacting protein 1	AK091871|SCHIP1|29970|schwannomin interacting protein 1
hg18_v1_chr12_-_69434598_69434637	0.082234	LHX3,4.p2	X82635|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	CR625935|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	NM_130846|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	U77917|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	BC072386|PTPRR|5801|protein tyrosine phosphatase, receptor type, R
hg18_v1_chr7_+_113853790_113853942	0.0818561	LHX3,4.p2	AF467253|FOXP2|93986|forkhead box P2	NM_001172767|FOXP2|93986|forkhead box P2	NM_148899|FOXP2|93986|forkhead box P2	AF467258|FOXP2|93986|forkhead box P2	AF467259|FOXP2|93986|forkhead box P2
hg18_v1_chrX_-_131989963_131989965	0.0811607	LHX3,4.p2	BC101189|USP26|83844|ubiquitin specific peptidase 26	BC101190|USP26|83844|ubiquitin specific peptidase 26	BC101191|USP26|83844|ubiquitin specific peptidase 26	BC101192|USP26|83844|ubiquitin specific peptidase 26	BC069073|USP26|83844|ubiquitin specific peptidase 26	AF285593|USP26|83844|ubiquitin specific peptidase 26	NM_031907|USP26|83844|ubiquitin specific peptidase 26
hg18_v1_chr11_-_117628211_117628310	0.0809957	LHX3,4.p2	AY358626|MPZL3|196264|myelin protein zero-like 3	NM_198275|MPZL3|196264|myelin protein zero-like 3	AK095399|MPZL3|196264|myelin protein zero-like 3	AK289390|MPZL3|196264|myelin protein zero-like 3	AK296951|MPZL3|196264|myelin protein zero-like 3	BC031223|MPZL3|196264|myelin protein zero-like 3	AK304292|MPZL3|196264|myelin protein zero-like 3	AK310966|MPZL3|196264|myelin protein zero-like 3	BC113586|MPZL3|196264|myelin protein zero-like 3	BC143897|MPZL3|196264|myelin protein zero-like 3
hg18_v1_chr11_+_61794205_61794264	0.0807453	LHX3,4.p2	BC067220|SCGB2A2|4250|secretoglobin, family 2A, member 2	NM_002411|SCGB2A2|4250|secretoglobin, family 2A, member 2	U33147|SCGB2A2|4250|secretoglobin, family 2A, member 2	BC128252|SCGB2A2|4250|secretoglobin, family 2A, member 2	BC128402|SCGB2A2|4250|secretoglobin, family 2A, member 2	AY217100|SCGB2A2|4250|secretoglobin, family 2A, member 2
hg18_v1_chr10_-_21825879_21826077	0.0806916	LHX3,4.p2	BC130594|C10orf114|399726|chromosome 10 open reading frame 114	BC132974|C10orf114|399726|chromosome 10 open reading frame 114	CR596294|C10orf114|399726|chromosome 10 open reading frame 114
hg18_v1_chr7_-_107667728_107667849	0.0806738	LHX3,4.p2	AJ001057|NRCAM|4897|neuronal cell adhesion molecule	NM_001037132|NRCAM|4897|neuronal cell adhesion molecule
hg18_v1_chr1_+_205329206_205329282	0.0805073	LHX3,4.p2	BC005378|C4BPB|725|complement component 4 binding protein, beta	NM_000716|C4BPB|725|complement component 4 binding protein, beta	NM_001017364|C4BPB|725|complement component 4 binding protein, beta	L11245|C4BPB|725|complement component 4 binding protein, beta	NM_001017367|C4BPB|725|complement component 4 binding protein, beta	AK315137|C4BPB|725|complement component 4 binding protein, beta
hg18_v1_chr1_-_89437098_89437220	0.0804444	LHX3,4.p2	AK304245|GBP4|115361|guanylate binding protein 4	AF288814|GBP4|115361|guanylate binding protein 4	AK131094|GBP4|115361|guanylate binding protein 4	AL832576|GBP4|115361|guanylate binding protein 4	BC070055|GBP4|115361|guanylate binding protein 4	BC017889|GBP4|115361|guanylate binding protein 4	AK312417|GBP4|115361|guanylate binding protein 4	BC008421|GBP4|115361|guanylate binding protein 4	NM_052941|GBP4|115361|guanylate binding protein 4
hg18_v1_chrX_-_15243647_15243666	0.0803635	LHX3,4.p2	AF425642|ASB11|140456|ankyrin repeat and SOCS box containing 11	BC069340|ASB11|140456|ankyrin repeat and SOCS box containing 11	BC103873|ASB11|140456|ankyrin repeat and SOCS box containing 11	BC103874|ASB11|140456|ankyrin repeat and SOCS box containing 11	BC103875|ASB11|140456|ankyrin repeat and SOCS box containing 11	NM_080873|ASB11|140456|ankyrin repeat and SOCS box containing 11	BX537857|ASB11|140456|ankyrin repeat and SOCS box containing 11
hg18_v1_chr1_+_184532027_184532033	0.0803545	LHX3,4.p2	NM_001127708|PRG4|10216|proteoglycan 4	NM_001127709|PRG4|10216|proteoglycan 4	NM_001127710|PRG4|10216|proteoglycan 4	NM_005807|PRG4|10216|proteoglycan 4	AK301343|PRG4|10216|proteoglycan 4	AK057197|PRG4|10216|proteoglycan 4	AK297718|PRG4|10216|proteoglycan 4	AK301487|PRG4|10216|proteoglycan 4	AK308235|PRG4|10216|proteoglycan 4
hg18_v1_chr19_-_58354091_58354133	0.0802327	LHX3,4.p2	BC002938|ZNF347|84671|zinc finger protein 347	BC015611|ZNF347|84671|zinc finger protein 347	AY029765|ZNF347|84671|zinc finger protein 347	AK289994|ZNF347|84671|zinc finger protein 347	AK314603|ZNF347|84671|zinc finger protein 347	AK096623|ZNF347|84671|zinc finger protein 347	NM_001172674|ZNF347|84671|zinc finger protein 347	NM_001172675|ZNF347|84671|zinc finger protein 347	NM_032584|ZNF347|84671|zinc finger protein 347
hg18_v1_chr12_+_8224056_8224131	0.0799323	LHX3,4.p2	AK096301|FAM66C|440078|family with sequence similarity 66, member C	BC048994|FAM66C|440078|family with sequence similarity 66, member C	BC034777|FAM66C|440078|family with sequence similarity 66, member C
hg18_v1_chr7_+_18515488_18515500	0.0798206	LHX3,4.p2	AK304343|HDAC9|9734|histone deacetylase 9
hg18_v1_chr6_+_29963328_29963453	0.0794577	LHX3,4.p2	AK299998|HLA-H|3136|major histocompatibility complex, class I, H (pseudogene)	AK090500|HLA-H|3136|major histocompatibility complex, class I, H (pseudogene)	AK308374|HLA-H|3136|major histocompatibility complex, class I, H (pseudogene)
hg18_v1_chr6_+_29663661_29663700	0.0783547	LHX3,4.p2	BC101683|OR2H2|7932|olfactory receptor, family 2, subfamily H, member 2	BC112176|OR2H2|7932|olfactory receptor, family 2, subfamily H, member 2	NM_007160|OR2H2|7932|olfactory receptor, family 2, subfamily H, member 2	EU446925|OR2H2|7932|olfactory receptor, family 2, subfamily H, member 2	BC069146|OR2H2|7932|olfactory receptor, family 2, subfamily H, member 2
hg18_v1_chr21_-_31107431_31107440	0.0783424	LHX3,4.p2	BC130397|KRTAP8-1|337879|keratin associated protein 8-1	BC133033|KRTAP8-1|337879|keratin associated protein 8-1	AB096961|KRTAP8-1|337879|keratin associated protein 8-1	AJ457064|KRTAP8-1|337879|keratin associated protein 8-1	NM_175857|KRTAP8-1|337879|keratin associated protein 8-1
hg18_v1_chr6_+_34314545_34314545	0.0783148	LHX3,4.p2	BC015789|HMGA1|3159|high mobility group AT-hook 1	NM_145905|HMGA1|3159|high mobility group AT-hook 1
hg18_v1_chr4_+_68995761_68995802	0.0782094	LHX3,4.p2	AK313859|TMPRSS11E|28983|transmembrane protease, serine 11E	NM_014058|TMPRSS11E|28983|transmembrane protease, serine 11E	AF064819|TMPRSS11E|28983|transmembrane protease, serine 11E	AK292787|TMPRSS11E|28983|transmembrane protease, serine 11E	AY359017|TMPRSS11E|28983|transmembrane protease, serine 11E	BC113412|TMPRSS11E|28983|transmembrane protease, serine 11E	BC113414|TMPRSS11E|28983|transmembrane protease, serine 11E
hg18_v1_chr8_-_132122016_132122016	0.0780402	LHX3,4.p2	NM_001115|ADCY8|114|adenylate cyclase 8 (brain)
hg18_v1_chrX_+_144716619_144716750	0.0776275	LHX3,4.p2	NM_004709|CXorf1|9142|chromosome X open reading frame 1	Y08902|CXorf1|9142|chromosome X open reading frame 1	BC113600|CXorf1|9142|chromosome X open reading frame 1	BC113604|CXorf1|9142|chromosome X open reading frame 1
hg18_v1_chr11_+_91724909_91724909	0.0774886	LHX3,4.p2	NM_001008781|FAT3|120114|FAT tumor suppressor homolog 3 (Drosophila)
hg18_v1_chr10_-_69125932_69125954	0.0774411	LHX3,4.p2	AF091606|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3	AK313882|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3	NM_013266|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3
hg18_v1_chr11_+_59580705_59580746	0.0768885	LHX3,4.p2	L35848|MS4A3|932|membrane-spanning 4-domains, subfamily A, member 3 (hematopoietic cell-specific)	BC008487|MS4A3|932|membrane-spanning 4-domains, subfamily A, member 3 (hematopoietic cell-specific)	CR612051|MS4A3|932|membrane-spanning 4-domains, subfamily A, member 3 (hematopoietic cell-specific)
hg18_v1_chr8_+_67096344_67096402	0.0768428	LHX3,4.p2	NM_033105|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta	BC016742|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta	AF368276|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta	AL133660|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta
hg18_v1_chr5_+_179065282_179065434	0.0768088	LHX3,4.p2	BC050534|CANX|821|calnexin	DQ890627|CANX|821|calnexin	DQ893794|CANX|821|calnexin
hg18_v1_chr11_-_56166490_56166522	0.0764146	LHX3,4.p2	NM_001002925|OR5AP2|338675|olfactory receptor, family 5, subfamily AP, member 2	BC136989|OR5AP2|338675|olfactory receptor, family 5, subfamily AP, member 2	BC136990|OR5AP2|338675|olfactory receptor, family 5, subfamily AP, member 2
hg18_v1_chr19_+_15699833_15699853	0.076398	LHX3,4.p2	BC112178|OR10H2|26538|olfactory receptor, family 10, subfamily H, member 2	BC113647|OR10H2|26538|olfactory receptor, family 10, subfamily H, member 2	NM_013939|OR10H2|26538|olfactory receptor, family 10, subfamily H, member 2	BC069085|OR10H2|26538|olfactory receptor, family 10, subfamily H, member 2	BC069457|OR10H2|26538|olfactory receptor, family 10, subfamily H, member 2
hg18_v1_chr6_+_167504070_167504150	0.0763518	LHX3,4.p2	NM_001145121|TCP10L2|401285|t-complex 10-like 2 (mouse)	BC063451|TCP10|6953|t-complex 10 homolog (mouse)	BC068592|TCP10|6953|t-complex 10 homolog (mouse)
hg18_v1_chr3_+_73193499_73193499	0.0762363	LHX3,4.p2	BC051316|EBLN2|55096|endogenous Borna-like N element-2	BC064501|EBLN2|55096|endogenous Borna-like N element-2	NM_018029|EBLN2|55096|endogenous Borna-like N element-2
hg18_v1_chrX_+_23982992_23983006	0.0762155	LHX3,4.p2	AK222577|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa	AK290397|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa	AK312247|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa	DQ891794|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa	DQ894977|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa	AB451230|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa	AB451353|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa	L19161|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa
hg18_v1_chr4_+_62045433_62045433	0.075799	LHX3,4.p2	NM_015236|LPHN3|23284|latrophilin 3
hg18_v1_chr8_-_134156353_134156402	0.0757446	LHX3,4.p2	AK311010|SLA|6503|Src-like-adaptor	AK310092|SLA|6503|Src-like-adaptor
hg18_v1_chr17_-_36192311_36192311	0.0738479	LHX3,4.p2	AJ564206|KRT27|342574|keratin 27	NM_181537|KRT27|342574|keratin 27
hg18_v1_chr17_+_12510089_12510230	0.0738247	LHX3,4.p2	BC126307|MYOCD|93649|myocardin	BC143391|MYOCD|93649|myocardin	AF532596|MYOCD|93649|myocardin
hg18_v1_chr8_+_133060353_133060429	0.0737823	LHX3,4.p2	BX648595|EFR3A|23167|EFR3 homolog A (S. cerevisiae)
hg18_v1_chr1_+_42773146_42773146	0.0735306	LHX3,4.p2	NM_001080850|CCDC30|728621|coiled-coil domain containing 30
hg18_v1_chr19_+_53641053_53641090	0.0734924	LHX3,4.p2	AF337808|GRWD1|83743|glutamate-rich WD repeat containing 1	BC002440|GRWD1|83743|glutamate-rich WD repeat containing 1	EF011614|GRWD1|83743|glutamate-rich WD repeat containing 1	AL713729|GRWD1|83743|glutamate-rich WD repeat containing 1	DQ892630|GRWD1|83743|glutamate-rich WD repeat containing 1	DQ895868|GRWD1|83743|glutamate-rich WD repeat containing 1	CR616744|GRWD1|83743|glutamate-rich WD repeat containing 1	BC036281|GRWD1|83743|glutamate-rich WD repeat containing 1	BC047351|GRWD1|83743|glutamate-rich WD repeat containing 1
hg18_v1_chrX_+_1670485_1670573	0.0732775	LHX3,4.p2	BC016935|AKAP17A|8227|A kinase (PRKA) anchor protein 17A	NM_005088|AKAP17A|8227|A kinase (PRKA) anchor protein 17A	BC110496|AKAP17A|8227|A kinase (PRKA) anchor protein 17A	BC110497|AKAP17A|8227|A kinase (PRKA) anchor protein 17A	AK308367|AKAP17A|8227|A kinase (PRKA) anchor protein 17A	M99578|AKAP17A|8227|A kinase (PRKA) anchor protein 17A	L03426|AKAP17A|8227|A kinase (PRKA) anchor protein 17A	BC028151|AKAP17A|8227|A kinase (PRKA) anchor protein 17A	BC015800|AKAP17A|8227|A kinase (PRKA) anchor protein 17A
hg18_v1_chr17_+_12509931_12509938	0.0731277	LHX3,4.p2	NM_001146312|MYOCD|93649|myocardin	NM_153604|MYOCD|93649|myocardin	AY764180|MYOCD|93649|myocardin
hg18_v1_chr17_-_64568641_64568730	0.0730388	LHX3,4.p2	BC062472|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9	AK057068|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9	AY028899|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9	NM_080283|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9
hg18_v1_chr1_-_58920315_58920353	0.0728302	LHX3,4.p2	
hg18_v1_chr17_-_44043278_44043349	0.0724315	LHX3,4.p2	BC015345|HOXB7|3217|homeobox B7	AK290653|HOXB7|3217|homeobox B7
hg18_v1_chr3_-_15538164_15538280	0.072373	LHX3,4.p2	BC126363|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	BC144004|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	BC074828|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	BC074829|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	AY150334|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	AY150335|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	AY150336|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	AY150337|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	AY150338|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	AY150339|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	AJ225895|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	AF057036|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	NM_005677|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	NM_080539|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	AK289688|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase
hg18_v1_chr5_-_168204430_168204444	0.072045	LHX3,4.p2	
hg18_v1_chr11_-_71202538_71202571	0.0719204	LHX3,4.p2	BC073927|LOC285407|285407|asparagine-linked glycosylation 1 homolog pseudogene
hg18_v1_chr15_-_72981595_72981663	0.0718735	LHX3,4.p2	AK025373|C15orf17|57184|chromosome 15 open reading frame 17
hg18_v1_chr12_+_106692291_106692291	0.0717407	LHX3,4.p2	AY238895|ASCL4|121549|achaete-scute complex homolog 4 (Drosophila)	NM_203436|ASCL4|121549|achaete-scute complex homolog 4 (Drosophila)
hg18_v1_chr16_-_30010705_30010791	0.0712678	LHX3,4.p2	BC026031|TBX6|6911|T-box 6	NM_004608|TBX6|6911|T-box 6	AK022330|TBX6|6911|T-box 6
hg18_v1_chr2_+_87828718_87828750	0.0710976	LHX3,4.p2	BC022294|PLGLB2|5342|plasminogen-like B2	M93143|PLGLB2|5342|plasminogen-like B2	NM_002665|PLGLB2|5342|plasminogen-like B2	BC005379|PLGLB2|5342|plasminogen-like B2	NM_001032392|PLGLB1|5343|plasminogen-like B1	BC070296|PLGLB1|5343|plasminogen-like B1	BC109248|PLGLB1|5343|plasminogen-like B1	BC107767|PLGLB1|5343|plasminogen-like B1
hg18_v1_chr4_-_45820686_45820854	0.0708419	LHX3,4.p2	DQ890976|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1	DQ894150|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1	CR933628|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1	BC031087|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1	AK289806|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1	AK299884|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1	BX648937|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1	NM_173536|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1	AK122845|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1
hg18_v1_chr8_-_78075834_78075834	0.0704979	LHX3,4.p2	NM_001172086|PEX2|5828|peroxisomal biogenesis factor 2	NM_001172087|PEX2|5828|peroxisomal biogenesis factor 2
hg18_v1_chr17_+_31195760_31196041	0.0700984	LHX3,4.p2	BC039129|TAF15|8148|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa
hg18_v1_chrX_+_90976314_90976314	0.0700172	LHX3,4.p2	AB026187|PCDH11X|27328|protocadherin 11 X-linked	AF332218|PCDH11X|27328|protocadherin 11 X-linked	AF332219|PCDH11X|27328|protocadherin 11 X-linked	AJ564932|PCDH11X|27328|protocadherin 11 X-linked	NM_014522|PCDH11X|27328|protocadherin 11 X-linked	NM_032968|PCDH11X|27328|protocadherin 11 X-linked	NM_032969|PCDH11X|27328|protocadherin 11 X-linked
hg18_v1_chr6_+_47732181_47732284	0.0689304	LHX3,4.p2	AY140953|GPR111|222611|G protein-coupled receptor 111	DQ315369|GPR111|222611|G protein-coupled receptor 111	NM_153839|GPR111|222611|G protein-coupled receptor 111
hg18_v1_chr12_+_54316910_54316942	0.0687461	LHX3,4.p2	BC136914|OR10P1|121130|olfactory receptor, family 10, subfamily P, member 1	NM_206899|OR10P1|121130|olfactory receptor, family 10, subfamily P, member 1
hg18_v1_chr18_+_44319365_44320177	0.0687447	LHX3,4.p2	AB007887|CTIF|9811|CBP80/20-dependent translation initiation factor	NM_001142397|CTIF|9811|CBP80/20-dependent translation initiation factor	NM_014772|CTIF|9811|CBP80/20-dependent translation initiation factor	BC042146|CTIF|9811|CBP80/20-dependent translation initiation factor
hg18_v1_chr5_-_137502975_137503030	0.068267	LHX3,4.p2	U90450|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)	AK312181|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)	AF067724|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)	BC026182|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)	NM_003551|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)
hg18_v1_chr8_+_55691179_55691232	0.0675523	LHX3,4.p2	AF141021|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)	NM_006269|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)	DQ980612|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)	DQ980613|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)	DQ980614|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)	AF143222|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)	AF146592|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)	DQ980615|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)
hg18_v1_chr8_+_7340777_7340877	0.067481	LHX3,4.p2	DQ119826|DEFB107A|245910|defensin, beta 107A	NM_001037668|DEFB107A|245910|defensin, beta 107A	NM_001040705|DEFB107B|503614|defensin, beta 107B	BC137510|DEFB107A|245910|defensin, beta 107A	BC137513|DEFB107A|245910|defensin, beta 107A	AF540979|DEFB107A|245910|defensin, beta 107A	AY122467|DEFB107A|245910|defensin, beta 107A
hg18_v1_chrX_-_77111790_77111794	0.0673643	LHX3,4.p2	NM_001029891|PGAM4|441531|phosphoglycerate mutase family member 4
hg18_v1_chr6_-_144427340_144427427	0.0673269	LHX3,4.p2	EF100438|PLAGL1|5325|pleiomorphic adenoma gene-like 1	EF100440|PLAGL1|5325|pleiomorphic adenoma gene-like 1	EF100442|PLAGL1|5325|pleiomorphic adenoma gene-like 1	EF100443|PLAGL1|5325|pleiomorphic adenoma gene-like 1	EF100444|PLAGL1|5325|pleiomorphic adenoma gene-like 1	EF100445|PLAGL1|5325|pleiomorphic adenoma gene-like 1	NM_001080951|PLAGL1|5325|pleiomorphic adenoma gene-like 1	NM_001080955|PLAGL1|5325|pleiomorphic adenoma gene-like 1
hg18_v1_chr19_+_3713650_3713670	0.0672786	LHX3,4.p2	NM_172251|MRPL54|116541|mitochondrial ribosomal protein L54
hg18_v1_chr20_+_24877904_24878141	0.0672738	LHX3,4.p2	AF031824|CST7|8530|cystatin F (leukocystatin)	BC015507|CST7|8530|cystatin F (leukocystatin)	AB015225|CST7|8530|cystatin F (leukocystatin)	BT009825|CST7|8530|cystatin F (leukocystatin)	AF036342|CST7|8530|cystatin F (leukocystatin)	CR541860|CST7|8530|cystatin F (leukocystatin)	CR541878|CST7|8530|cystatin F (leukocystatin)
hg18_v1_chr19_+_53641029_53641051	0.0672292	LHX3,4.p2	AK131055|GRWD1|83743|glutamate-rich WD repeat containing 1	AK315625|GRWD1|83743|glutamate-rich WD repeat containing 1
hg18_v1_chr19_-_7718396_7718463	0.0672058	LHX3,4.p2	AY042221|CD209|30835|CD209 molecule	AY042222|CD209|30835|CD209 molecule	AY042223|CD209|30835|CD209 molecule	AY042224|CD209|30835|CD209 molecule	AY042225|CD209|30835|CD209 molecule	AY042226|CD209|30835|CD209 molecule	AY042227|CD209|30835|CD209 molecule	AY042228|CD209|30835|CD209 molecule	AY042229|CD209|30835|CD209 molecule	AY042230|CD209|30835|CD209 molecule	AY042231|CD209|30835|CD209 molecule	AY042232|CD209|30835|CD209 molecule	AY042233|CD209|30835|CD209 molecule	BC110615|CD209|30835|CD209 molecule	AF290886|CD209|30835|CD209 molecule	AK293089|CD209|30835|CD209 molecule	M98457|CD209|30835|CD209 molecule	AK304190|CD209|30835|CD209 molecule	AK313585|CD209|30835|CD209 molecule	NM_001144893|CD209|30835|CD209 molecule	NM_001144894|CD209|30835|CD209 molecule	NM_001144895|CD209|30835|CD209 molecule	NM_001144896|CD209|30835|CD209 molecule	NM_001144897|CD209|30835|CD209 molecule	NM_001144899|CD209|30835|CD209 molecule	NM_021155|CD209|30835|CD209 molecule
hg18_v1_chr11_+_48466844_48466920	0.0670851	LHX3,4.p2	BC140738|OR4A47|403253|olfactory receptor, family 4, subfamily A, member 47	NM_001005512|OR4A47|403253|olfactory receptor, family 4, subfamily A, member 47
hg18_v1_chr12_+_54172413_54172413	0.0669742	LHX3,4.p2	NM_001005519|OR6C68|403284|olfactory receptor, family 6, subfamily C, member 68
hg18_v1_chr12_+_120726317_120726468	0.0667254	LHX3,4.p2	CR598662|SETD1B|23067|SET domain containing 1B
hg18_v1_chr7_+_5904858_5904955	0.066527	LHX3,4.p2	BC067810|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	NM_015622|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	BC132749|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	BC132751|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	AK292326|C7orf28B|221960|chromosome 7 open reading frame 28B	CR595861|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	BC010130|C7orf28B|221960|chromosome 7 open reading frame 28B	CR602854|C7orf28B|221960|chromosome 7 open reading frame 28B
hg18_v1_chr17_-_4879423_4879450	0.0664765	LHX3,4.p2	AB362534|GPR172B|55065|G protein-coupled receptor 172B	AK023570|GPR172B|55065|G protein-coupled receptor 172B	AB362533|GPR172B|55065|G protein-coupled receptor 172B	BC060810|GPR172B|55065|G protein-coupled receptor 172B	NM_001104577|GPR172B|55065|G protein-coupled receptor 172B	NM_017986|GPR172B|55065|G protein-coupled receptor 172B
hg18_v1_chr9_-_116732403_116732695	0.0662056	LHX3,4.p2	BC093630|TNFSF8|944|tumor necrosis factor (ligand) superfamily, member 8	BC111939|TNFSF8|944|tumor necrosis factor (ligand) superfamily, member 8	L09753|TNFSF8|944|tumor necrosis factor (ligand) superfamily, member 8	NM_001244|TNFSF8|944|tumor necrosis factor (ligand) superfamily, member 8	AK313619|TNFSF8|944|tumor necrosis factor (ligand) superfamily, member 8
hg18_v1_chr1_-_159191184_159191213	0.0661991	LHX3,4.p2	AY065973|ITLN2|142683|intelectin 2	AY358905|ITLN2|142683|intelectin 2	NM_080878|ITLN2|142683|intelectin 2	BC117225|ITLN2|142683|intelectin 2	BC143339|ITLN2|142683|intelectin 2	BC143341|ITLN2|142683|intelectin 2
hg18_v1_chr14_-_87863003_87863008	0.0653491	LHX3,4.p2	AF279890|KCNK10|54207|potassium channel, subfamily K, member 10	NM_021161|KCNK10|54207|potassium channel, subfamily K, member 10
hg18_v1_chr14_-_20128228_20128256	0.0653352	LHX3,4.p2	BX161458|RNASE11|122651|ribonuclease, RNase A family, 11 (non-active)	NM_145250|RNASE11|122651|ribonuclease, RNase A family, 11 (non-active)
hg18_v1_chr20_-_29360048_29360048	0.0652961	LHX3,4.p2	DQ012020|DEFB116|245930|defensin, beta 116	NM_001037731|DEFB116|245930|defensin, beta 116
hg18_v1_chrX_+_48978875_48978909	0.0652622	LHX3,4.p2	AK298264|CCDC22|28952|coiled-coil domain containing 22	CR610841|CCDC22|28952|coiled-coil domain containing 22	AK296911|CCDC22|28952|coiled-coil domain containing 22	AK291976|CCDC22|28952|coiled-coil domain containing 22
hg18_v1_chr12_-_41269679_41269840	0.065037	LHX3,4.p2	BC114939|PRICKLE1|144165|prickle homolog 1 (Drosophila)	BC114940|PRICKLE1|144165|prickle homolog 1 (Drosophila)	AF399844|PRICKLE1|144165|prickle homolog 1 (Drosophila)	AF543759|PRICKLE1|144165|prickle homolog 1 (Drosophila)	AF543760|PRICKLE1|144165|prickle homolog 1 (Drosophila)	AK056499|PRICKLE1|144165|prickle homolog 1 (Drosophila)	NM_153026|PRICKLE1|144165|prickle homolog 1 (Drosophila)
hg18_v1_chr6_+_130381408_130381428	0.0649206	LHX3,4.p2	AK094137|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)	NM_001007102|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)	NM_032438|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)	BC060845|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)	AK290219|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)
hg18_v1_chr17_-_44043361_44043381	0.0648652	LHX3,4.p2	AK223249|HOXB7|3217|homeobox B7	M16937|HOXB7|3217|homeobox B7	NM_004502|HOXB7|3217|homeobox B7
hg18_v1_chrX_+_90977115_90977159	0.0648061	LHX3,4.p2	AJ564931|PCDH11X|27328|protocadherin 11 X-linked	NM_001168360|PCDH11X|27328|protocadherin 11 X-linked	NM_001168361|PCDH11X|27328|protocadherin 11 X-linked	NM_001168362|PCDH11X|27328|protocadherin 11 X-linked	NM_001168363|PCDH11X|27328|protocadherin 11 X-linked	AF206516|PCDH11X|27328|protocadherin 11 X-linked	AF217288|PCDH11X|27328|protocadherin 11 X-linked	AY861432|PCDH11X|27328|protocadherin 11 X-linked	AY861433|PCDH11X|27328|protocadherin 11 X-linked	AY861434|PCDH11X|27328|protocadherin 11 X-linked	AY861435|PCDH11X|27328|protocadherin 11 X-linked
hg18_v1_chr4_-_184480572_184480572	0.0647047	LHX3,4.p2	NM_001185149|CLDN24|100132463|claudin 24
hg18_v1_chr2_+_137464931_137464931	0.0646697	LHX3,4.p2	NM_001080427|THSD7B|80731|thrombospondin, type I, domain containing 7B
hg18_v1_chr3_-_102522093_102522131	0.0643815	LHX3,4.p2	AF173155|IMPG2|50939|interphotoreceptor matrix proteoglycan 2	NM_016247|IMPG2|50939|interphotoreceptor matrix proteoglycan 2
hg18_v1_chr4_-_100070808_100070810	0.0643601	LHX3,4.p2	NM_001130679|EIF4E|1977|eukaryotic translation initiation factor 4E	NM_001968|EIF4E|1977|eukaryotic translation initiation factor 4E	BC035166|EIF4E|1977|eukaryotic translation initiation factor 4E
hg18_v1_chr3_+_161040439_161040667	0.0638822	LHX3,4.p2	CR593613|SCHIP1|29970|schwannomin interacting protein 1	BC005947|SCHIP1|29970|schwannomin interacting protein 1	CR607434|SCHIP1|29970|schwannomin interacting protein 1
hg18_v1_chr21_+_29322100_29322128	0.0637604	LHX3,4.p2	DQ892395|USP16|10600|ubiquitin specific peptidase 16	DQ895610|USP16|10600|ubiquitin specific peptidase 16
hg18_v1_chr6_-_64087806_64087840	0.0637274	LHX3,4.p2	DQ682605|LGSN|51557|lengsin, lens protein with glutamine synthetase domain	DQ682606|LGSN|51557|lengsin, lens protein with glutamine synthetase domain	BC130366|LGSN|51557|lengsin, lens protein with glutamine synthetase domain	BC130368|LGSN|51557|lengsin, lens protein with glutamine synthetase domain	AF242388|LGSN|51557|lengsin, lens protein with glutamine synthetase domain	NM_001143940|LGSN|51557|lengsin, lens protein with glutamine synthetase domain	NM_016571|LGSN|51557|lengsin, lens protein with glutamine synthetase domain
hg18_v1_chr11_-_55460451_55460451	0.0633431	LHX3,4.p2	BC069093|OR5I1|10798|olfactory receptor, family 5, subfamily I, member 1	NM_006637|OR5I1|10798|olfactory receptor, family 5, subfamily I, member 1
hg18_v1_chr21_-_18697829_18697843	0.0627544	LHX3,4.p2	BC111749|TMPRSS15|5651|transmembrane protease, serine 15	NM_002772|TMPRSS15|5651|transmembrane protease, serine 15	U09860|TMPRSS15|5651|transmembrane protease, serine 15
hg18_v1_chr11_-_59707074_59707271	0.0626089	LHX3,4.p2	AK301387|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A	AB013104|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A	AF350502|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A	AF350503|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A	CR609705|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A	AF142409|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A	BC022854|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A	BC108728|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A	CR625448|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A	AK026454|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A	AF212240|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A	AF237908|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A	AF253977|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A	AF261136|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A	AF354930|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A	NM_022349|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A	NM_152851|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A	NM_152852|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A	AK300725|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A
hg18_v1_chr1_+_103999663_103999664	0.0624066	LHX3,4.p2	NM_001008221|AMY1A|276|amylase, alpha 1A (salivary)	AK292341|AMY1A|276|amylase, alpha 1A (salivary)
hg18_v1_chr20_-_1921451_1921451	0.0621194	LHX3,4.p2	AK289618|PDYN|5173|prodynorphin	NM_001190892|PDYN|5173|prodynorphin
hg18_v1_chr4_-_47678187_47678306	0.0620529	LHX3,4.p2	M84741|CNGA1|1259|cyclic nucleotide gated channel alpha 1	NM_001142564|CNGA1|1259|cyclic nucleotide gated channel alpha 1	S42457|CNGA1|1259|cyclic nucleotide gated channel alpha 1
hg18_v1_chr10_-_46039941_46040063	0.0619475	LHX3,4.p2	AY704146|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	AY704149|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	AY704151|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	AY704155|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	BC093750|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	BC113473|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	BC143394|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	BC171725|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	NM_001042357|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	NM_001042389|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A
hg18_v1_chr3_+_51550635_51550635	0.0617259	LHX3,4.p2	AK122683|RAD54L2|23132|RAD54-like 2 (S. cerevisiae)	NM_015106|RAD54L2|23132|RAD54-like 2 (S. cerevisiae)
hg18_v1_chr4_-_113656762_113656786	0.0615095	LHX3,4.p2	CR615296|NEUROG2|63973|neurogenin 2	BC036847|NEUROG2|63973|neurogenin 2	NM_024019|NEUROG2|63973|neurogenin 2
hg18_v1_chr3_-_152659186_152659186	0.0610168	LHX3,4.p2	AY273815|IGSF10|285313|immunoglobulin superfamily, member 10	NM_178822|IGSF10|285313|immunoglobulin superfamily, member 10
hg18_v1_chr1_+_172683834_172683872	0.0610087	LHX3,4.p2	BC095532|GPR52|9293|G protein-coupled receptor 52	NM_005684|GPR52|9293|G protein-coupled receptor 52	BC067456|GPR52|9293|G protein-coupled receptor 52	BC067457|GPR52|9293|G protein-coupled receptor 52	BC067458|GPR52|9293|G protein-coupled receptor 52	BC067459|GPR52|9293|G protein-coupled receptor 52	BC067460|GPR52|9293|G protein-coupled receptor 52	BC069460|GPR52|9293|G protein-coupled receptor 52
hg18_v1_chr10_+_75202258_75202327	0.0608981	LHX3,4.p2	AK095482|FUT11|170384|fucosyltransferase 11 (alpha (1,3) fucosyltransferase)
hg18_v1_chr15_+_40427592_40427592	0.060887	LHX3,4.p2	NM_212465|CAPN3|825|calpain 3, (p94)
hg18_v1_chr10_-_46593923_46594128	0.0606665	LHX3,4.p2	DQ893430|ANXA8L2|244|annexin A8-like 2	DQ896775|ANXA8|653145|annexin A8	M81844|ANXA8|653145|annexin A8	AK223149|ANXA8L2|244|annexin A8-like 2	AK300139|ANXA8|653145|annexin A8	BC021910|LOC653110|653110|hypothetical LOC653110	X16662|ANXA8L2|244|annexin A8-like 2	BC004376|ANXA8|653145|annexin A8	NM_001098845|ANXA8L1|728113|annexin A8-like 1	Z36830|ANXA8|653145|annexin A8	BC073755|ANXA8|653145|annexin A8	BC008813|ANXA8L2|244|annexin A8-like 2	NM_001040084|ANXA8|653145|annexin A8	AK298761|ANXA8|653145|annexin A8
hg18_v1_chr3_+_153468518_153468518	0.0606582	LHX3,4.p2	NM_021038|MBNL1|4154|muscleblind-like (Drosophila)	NM_207292|MBNL1|4154|muscleblind-like (Drosophila)
hg18_v1_chr12_-_51476047_51476167	0.0600201	LHX3,4.p2	AJ628418|KRT3|3850|keratin 3	NM_057088|KRT3|3850|keratin 3	AK314987|KRT3|3850|keratin 3
hg18_v1_chr11_+_55899675_55899675	0.0599458	LHX3,4.p2	NM_001005204|OR8U1|219417|olfactory receptor, family 8, subfamily U, member 1	NM_001013356|OR8U8|504189|olfactory receptor, family 8, subfamily U, member 8
hg18_v1_chr21_+_33364316_33364328	0.0597842	LHX3,4.p2	BC033290|OLIG1|116448|oligodendrocyte transcription factor 1	NM_138983|OLIG1|116448|oligodendrocyte transcription factor 1	AL834450|OLIG1|116448|oligodendrocyte transcription factor 1	AB209791|OLIG1|116448|oligodendrocyte transcription factor 1
hg18_v1_chr12_+_63084317_63084710	0.0597618	LHX3,4.p2	NM_007235|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)	AK308108|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)	AK292884|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)
hg18_v1_chr2_-_25245062_25245062	0.0596588	LHX3,4.p2	NM_000939|POMC|5443|proopiomelanocortin	NM_001035256|POMC|5443|proopiomelanocortin
hg18_v1_chr6_+_161043214_161043289	0.0594292	LHX3,4.p2	NM_000301|PLG|5340|plasminogen	NM_001168338|PLG|5340|plasminogen	AK308036|PLG|5340|plasminogen	AK312966|PLG|5340|plasminogen	AK298338|PLG|5340|plasminogen	X05199|PLG|5340|plasminogen	M74220|PLG|5340|plasminogen	BC060513|PLG|5340|plasminogen
hg18_v1_chr10_+_75202071_75202096	0.0590833	LHX3,4.p2	AK314944|FUT11|170384|fucosyltransferase 11 (alpha (1,3) fucosyltransferase)	DQ894378|FUT11|170384|fucosyltransferase 11 (alpha (1,3) fucosyltransferase)	EU176260|FUT11|170384|fucosyltransferase 11 (alpha (1,3) fucosyltransferase)
hg18_v1_chr3_+_133518900_133518956	0.0589575	LHX3,4.p2	NM_001099|ACPP|55|acid phosphatase, prostate	NM_001134194|ACPP|55|acid phosphatase, prostate	AK300540|ACPP|55|acid phosphatase, prostate	BC007460|ACPP|55|acid phosphatase, prostate	BC016344|ACPP|55|acid phosphatase, prostate	BC008493|ACPP|55|acid phosphatase, prostate	BC017877|ACPP|55|acid phosphatase, prostate	X53605|ACPP|55|acid phosphatase, prostate
hg18_v1_chr2_-_80384997_80385075	0.0588999	LHX3,4.p2	BC045113|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1	NM_178839|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1	AK056644|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1
hg18_v1_chr2_+_169634330_169634422	0.0587312	LHX3,4.p2	AF343729|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9	AF240697|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9	AF240698|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9	BC058883|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9
hg18_v1_chr7_-_92693716_92693722	0.058705	LHX3,4.p2	AK096002|HEPACAM2|253012|HEPACAM family member 2	AK298361|HEPACAM2|253012|HEPACAM family member 2	NM_001039372|HEPACAM2|253012|HEPACAM family member 2
hg18_v1_chr5_-_98290117_98290139	0.0582168	LHX3,4.p2	BC054860|CHD1|1105|chromodomain helicase DNA binding protein 1	BC117134|CHD1|1105|chromodomain helicase DNA binding protein 1	NM_001270|CHD1|1105|chromodomain helicase DNA binding protein 1	AF006513|CHD1|1105|chromodomain helicase DNA binding protein 1
hg18_v1_chr12_-_10846435_10846492	0.0581766	LHX3,4.p2	BC069091|TAS2R7|50837|taste receptor, type 2, member 7	BC093992|TAS2R7|50837|taste receptor, type 2, member 7	BC113561|TAS2R7|50837|taste receptor, type 2, member 7	NM_023919|TAS2R7|50837|taste receptor, type 2, member 7
hg18_v1_chr4_+_123311207_123311207	0.0581494	LHX3,4.p2	DQ335469|KIAA1109|84162|KIAA1109	NM_015312|KIAA1109|84162|KIAA1109
hg18_v1_chr19_+_614381_614481	0.05733	LHX3,4.p2	
hg18_v1_chr20_-_604822_604822	0.0568922	LHX3,4.p2	AY129025|SCRT2|85508|scratch homolog 2, zinc finger protein (Drosophila)	NM_033129|SCRT2|85508|scratch homolog 2, zinc finger protein (Drosophila)
hg18_v1_chrX_+_65300803_65300931	0.0568733	LHX3,4.p2	NM_001130860|HEPH|9843|hephaestin	AK311043|HEPH|9843|hephaestin	AB014598|HEPH|9843|hephaestin	NM_014799|HEPH|9843|hephaestin	AY358990|HEPH|9843|hephaestin	AK307761|HEPH|9843|hephaestin
hg18_v1_chrX_+_49213543_49213553	0.0567575	LHX3,4.p2	CR542236|GAGE4|2576|G antigen 4	DQ891160|GAGE5|2577|G antigen 5	NM_001098405|GAGE12F|100008586|G antigen 12F	U19144|GAGE3|2575|G antigen 3	BC069086|GAGE7|2579|G antigen 7
hg18_v1_chr19_+_7468444_7468495	0.0566012	LHX3,4.p2	NM_198534|C19orf45|374877|chromosome 19 open reading frame 45	AK093103|C19orf45|374877|chromosome 19 open reading frame 45	BC029824|C19orf45|374877|chromosome 19 open reading frame 45	BC034779|C19orf45|374877|chromosome 19 open reading frame 45
hg18_v1_chr13_-_19244398_19244483	0.0562708	LHX3,4.p2	AL834505|PSPC1|55269|paraspeckle component 1
hg18_v1_chr18_-_44723116_44723174	0.0561401	LHX3,4.p2	AK131394|SMAD7|4092|SMAD family member 7	NM_001190823|SMAD7|4092|SMAD family member 7
hg18_v1_chr1_+_246178701_246178782	0.055619	LHX3,4.p2	BC140751|OR2L8|391190|olfactory receptor, family 2, subfamily L, member 8	NM_001001963|OR2L8|391190|olfactory receptor, family 2, subfamily L, member 8
hg18_v1_chr9_+_96561750_96561886	0.0554918	LHX3,4.p2	CR626537|C9orf3|84909|chromosome 9 open reading frame 3	NM_001193329|C9orf3|84909|chromosome 9 open reading frame 3	AJ560639|C9orf3|84909|chromosome 9 open reading frame 3
hg18_v1_chr3_+_69998064_69998119	0.0552925	LHX3,4.p2	NM_198177|MITF|4286|microphthalmia-associated transcription factor	AK297858|MITF|4286|microphthalmia-associated transcription factor
hg18_v1_chr19_-_3508566_3508583	0.0552329	LHX3,4.p2	CR601769|C19orf28|126321|chromosome 19 open reading frame 28	BC068439|C19orf28|126321|chromosome 19 open reading frame 28	NM_001042680|C19orf28|126321|chromosome 19 open reading frame 28	NM_021731|C19orf28|126321|chromosome 19 open reading frame 28	NM_174983|C19orf28|126321|chromosome 19 open reading frame 28
hg18_v1_chr5_-_141973875_141973909	0.0551746	LHX3,4.p2	S67291|FGF1|2246|fibroblast growth factor 1 (acidic)	S67292|FGF1|2246|fibroblast growth factor 1 (acidic)	S67294|FGF1|2246|fibroblast growth factor 1 (acidic)	X65778|FGF1|2246|fibroblast growth factor 1 (acidic)	X65779|FGF1|2246|fibroblast growth factor 1 (acidic)	M13361|FGF1|2246|fibroblast growth factor 1 (acidic)	NM_033137|FGF1|2246|fibroblast growth factor 1 (acidic)	X51943|FGF1|2246|fibroblast growth factor 1 (acidic)
hg18_v1_chr18_+_53170718_53170718	0.0550414	LHX3,4.p2	AB208996|ST8SIA3|51046|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3	NM_015879|ST8SIA3|51046|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3
hg18_v1_chr1_-_209373937_209374079	0.0547729	LHX3,4.p2	AF078741|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1	AF078742|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1	BC113709|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1	BC143599|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1	AJ001366|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1	NM_002238|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1	NM_172362|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1
hg18_v1_chr18_-_3835295_3835366	0.0547339	LHX3,4.p2	AB000276|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1	NM_001003809|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1	U67988|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1	AK294747|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1
hg18_v1_chr6_-_134680888_134680888	0.0543322	LHX3,4.p2	AK055077|SGK1|6446|serum/glucocorticoid regulated kinase 1	NM_001143676|SGK1|6446|serum/glucocorticoid regulated kinase 1
hg18_v1_chr2_+_171280046_171280163	0.0541825	LHX3,4.p2	NM_001003845|SP5|389058|Sp5 transcription factor	AB096175|SP5|389058|Sp5 transcription factor
hg18_v1_chr11_-_16454493_16454510	0.0538469	LHX3,4.p2	AF309034|SOX6|55553|SRY (sex determining region Y)-box 6	NM_033326|SOX6|55553|SRY (sex determining region Y)-box 6
hg18_v1_chr6_-_136829705_136829705	0.0537509	LHX3,4.p2	AK299355|MAP7|9053|microtubule-associated protein 7	NM_001198615|MAP7|9053|microtubule-associated protein 7
hg18_v1_chr7_+_106897737_106897740	0.0535052	LHX3,4.p2	NM_005295|GPR22|2845|G protein-coupled receptor 22	AK122621|GPR22|2845|G protein-coupled receptor 22	AK307393|GPR22|2845|G protein-coupled receptor 22
hg18_v1_chr15_+_36014748_36014748	0.053236	LHX3,4.p2	BC029221|TMCO5A|145942|transmembrane and coiled-coil domains 5A	NM_152453|TMCO5A|145942|transmembrane and coiled-coil domains 5A
hg18_v1_chr1_-_149004852_149004859	0.0530387	LHX3,4.p2	CR613968|CTSS|1520|cathepsin S	BC002642|CTSS|1520|cathepsin S	CR623699|CTSS|1520|cathepsin S
hg18_v1_chr11_-_780103_780125	0.052926	LHX3,4.p2	BC034732|CEND1|51286|cell cycle exit and neuronal differentiation 1	AK074547|CEND1|51286|cell cycle exit and neuronal differentiation 1	AK312993|CEND1|51286|cell cycle exit and neuronal differentiation 1	NM_016564|CEND1|51286|cell cycle exit and neuronal differentiation 1
hg18_v1_chr13_-_59485299_59485343	0.0528663	LHX3,4.p2	BC048963|DIAPH3|81624|diaphanous homolog 3 (Drosophila)	BC068504|DIAPH3|81624|diaphanous homolog 3 (Drosophila)	AL137718|DIAPH3|81624|diaphanous homolog 3 (Drosophila)	AK307652|DIAPH3|81624|diaphanous homolog 3 (Drosophila)	BC034952|DIAPH3|81624|diaphanous homolog 3 (Drosophila)	NM_030932|DIAPH3|81624|diaphanous homolog 3 (Drosophila)
hg18_v1_chr6_+_154373323_154373328	0.052592	LHX3,4.p2	DQ680044|OPRM1|4988|opioid receptor, mu 1	EU340241|OPRM1|4988|opioid receptor, mu 1	EU340242|OPRM1|4988|opioid receptor, mu 1	EU340243|OPRM1|4988|opioid receptor, mu 1	NM_001145279|OPRM1|4988|opioid receptor, mu 1	NM_001145280|OPRM1|4988|opioid receptor, mu 1	NM_001145281|OPRM1|4988|opioid receptor, mu 1
hg18_v1_chr22_-_25291268_25291369	0.0520786	LHX3,4.p2	CR610140|TPST2|8459|tyrosylprotein sulfotransferase 2	CR626027|TPST2|8459|tyrosylprotein sulfotransferase 2	CR595821|TPST2|8459|tyrosylprotein sulfotransferase 2	CR596688|TPST2|8459|tyrosylprotein sulfotransferase 2	CR610531|TPST2|8459|tyrosylprotein sulfotransferase 2	CR595659|TPST2|8459|tyrosylprotein sulfotransferase 2	CR606597|TPST2|8459|tyrosylprotein sulfotransferase 2	CR626067|TPST2|8459|tyrosylprotein sulfotransferase 2	CR604203|TPST2|8459|tyrosylprotein sulfotransferase 2	CR596364|TPST2|8459|tyrosylprotein sulfotransferase 2	AK075139|TPST2|8459|tyrosylprotein sulfotransferase 2	NM_001008566|TPST2|8459|tyrosylprotein sulfotransferase 2
hg18_v1_chr1_-_51660328_51660380	0.0518257	LHX3,4.p2	AK090936|EPS15|2060|epidermal growth factor receptor pathway substrate 15	AK308128|EPS15|2060|epidermal growth factor receptor pathway substrate 15	BX647676|EPS15|2060|epidermal growth factor receptor pathway substrate 15	NM_001159969|EPS15|2060|epidermal growth factor receptor pathway substrate 15
hg18_v1_chr7_-_36991189_36991189	0.05175	LHX3,4.p2	BC064635|ELMO1|9844|engulfment and cell motility 1	NM_001039459|ELMO1|9844|engulfment and cell motility 1
hg18_v1_chr10_-_116241572_116241622	0.0514938	LHX3,4.p2	
hg18_v1_chr2_-_108972100_108972259	0.0513994	LHX3,4.p2	AK313781|EDAR|10913|ectodysplasin A receptor	CR749352|EDAR|10913|ectodysplasin A receptor	AF130988|EDAR|10913|ectodysplasin A receptor	NM_022336|EDAR|10913|ectodysplasin A receptor
hg18_v1_chr2_+_24660849_24660913	0.0513828	LHX3,4.p2	NM_003743|NCOA1|8648|nuclear receptor coactivator 1	NM_147223|NCOA1|8648|nuclear receptor coactivator 1	NM_147233|NCOA1|8648|nuclear receptor coactivator 1	AJ000881|NCOA1|8648|nuclear receptor coactivator 1	AJ000882|NCOA1|8648|nuclear receptor coactivator 1	U59302|NCOA1|8648|nuclear receptor coactivator 1
hg18_v1_chr17_-_36507900_36507900	0.0512395	LHX3,4.p2	NM_031960|KRTAP4-8|728224|keratin associated protein 4-8
hg18_v1_chr8_-_57189094_57189094	0.0507522	LHX3,4.p2	BC069569|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog	BC069590|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog	BC106737|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog	BC106738|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog	NM_005372|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog
hg18_v1_chr9_-_41944687_41945142	0.0505732	LHX3,4.p2	BC019880|MGC21881|389741|hypothetical locus MGC21881	BC040170|MGC21881|389741|hypothetical locus MGC21881	BC000869|MGC21881|389741|hypothetical locus MGC21881	BC015151|MGC21881|389741|hypothetical locus MGC21881	AK092305|MGC21881|389741|hypothetical locus MGC21881	AK095690|MGC21881|389741|hypothetical locus MGC21881	BC027338|MGC21881|389741|hypothetical locus MGC21881
hg18_v1_chr1_-_68688219_68688229	0.0504996	LHX3,4.p2	AK289925|RPE65|6121|retinal pigment epithelium-specific protein 65kDa	BC075035|RPE65|6121|retinal pigment epithelium-specific protein 65kDa	BC075036|RPE65|6121|retinal pigment epithelium-specific protein 65kDa	NM_000329|RPE65|6121|retinal pigment epithelium-specific protein 65kDa	U18991|RPE65|6121|retinal pigment epithelium-specific protein 65kDa
hg18_v1_chr1_-_67039518_67039529	0.0501362	LHX3,4.p2	BC101646|INSL5|10022|insulin-like 5	BC101648|INSL5|10022|insulin-like 5	AF133816|INSL5|10022|insulin-like 5	NM_005478|INSL5|10022|insulin-like 5	AY359030|INSL5|10022|insulin-like 5
hg18_v1_chr1_+_195123766_195123855	0.0498268	LHX3,4.p2	AK292752|CFHR4|10877|complement factor H-related 4	NM_006684|CFHR4|10877|complement factor H-related 4	X98337|CFHR4|10877|complement factor H-related 4	AJ640130|CFHR4|10877|complement factor H-related 4	BC074957|CFHR4|10877|complement factor H-related 4
hg18_v1_chr9_-_94206648_94206801	0.0495464	LHX3,4.p2	AF086912|OGN|4969|osteoglycin	AF100758|OGN|4969|osteoglycin	CR614070|OGN|4969|osteoglycin	NM_014057|OGN|4969|osteoglycin	NM_033014|OGN|4969|osteoglycin	AK289628|OGN|4969|osteoglycin	AK295433|OGN|4969|osteoglycin
hg18_v1_chr6_-_50045296_50045296	0.0491017	LHX3,4.p2	DQ012017|DEFB113|245927|defensin, beta 113	NM_001037729|DEFB113|245927|defensin, beta 113
hg18_v1_chr14_-_93665678_93665709	0.0487893	LHX3,4.p2	NM_032036|IFI27L2|83982|interferon, alpha-inducible protein 27-like 2
hg18_v1_chr18_-_68683913_68683913	0.0486763	LHX3,4.p2	AF448839|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1	NM_138999|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1	NM_153181|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1
hg18_v1_chr11_+_55096179_55096179	0.0486546	LHX3,4.p2	NM_001004701|OR4C16|219428|olfactory receptor, family 4, subfamily C, member 16
hg18_v1_chr4_-_9650931_9651109	0.0484506	LHX3,4.p2	AK310895|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9	BC018897|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9	NM_001001290|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9	AK096819|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9
hg18_v1_chr13_+_108079570_108079571	0.0483645	LHX3,4.p2	AB290159|MYO16|23026|myosin XVI	AK127806|MYO16|23026|myosin XVI	NM_001198950|MYO16|23026|myosin XVI
hg18_v1_chr22_+_35290271_35290344	0.0482144	LHX3,4.p2	
hg18_v1_chr11_-_27679617_27679755	0.0481359	LHX3,4.p2	CR616691|BDNF|627|brain-derived neurotrophic factor	AB038672|BDNF|627|brain-derived neurotrophic factor	AY054397|BDNF|627|brain-derived neurotrophic factor	BC029795|BDNF|627|brain-derived neurotrophic factor	EF674521|BDNF|627|brain-derived neurotrophic factor	NM_170733|BDNF|627|brain-derived neurotrophic factor
hg18_v1_chr11_+_6176951_6177029	0.0480877	LHX3,4.p2	BC137225|OR52W1|120787|olfactory receptor, family 52, subfamily W, member 1	NM_001005178|OR52W1|120787|olfactory receptor, family 52, subfamily W, member 1
hg18_v1_chr12_+_130004404_130004408	0.0479241	LHX3,4.p2	BX649116|GPR133|283383|G protein-coupled receptor 133	NM_198827|GPR133|283383|G protein-coupled receptor 133
hg18_v1_chr16_-_3362283_3362283	0.0473597	LHX3,4.p2	NM_001190476|MTRNR2L4|100463285|MT-RNR2-like 4
hg18_v1_chr3_+_23904086_23904139	0.0472818	LHX3,4.p2	CR609756|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1 (UBC4/5 homolog, yeast)
hg18_v1_chr8_-_125785611_125785615	0.0471421	LHX3,4.p2	U50573|MTSS1|9788|metastasis suppressor 1
hg18_v1_chr12_-_69434650_69434805	0.0466665	LHX3,4.p2	BC092469|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	U77916|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	BX571751|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	AK304457|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	AK304672|PTPRR|5801|protein tyrosine phosphatase, receptor type, R
hg18_v1_chr10_+_17310475_17310610	0.0464892	LHX3,4.p2	BC066956|VIM|7431|vimentin
hg18_v1_chr19_+_45563607_45563635	0.0462392	LHX3,4.p2	CR590703|PLD3|23646|phospholipase D family, member 3	CR623894|PLD3|23646|phospholipase D family, member 3
hg18_v1_chr2_+_47449951_47450148	0.0461847	LHX3,4.p2	AK026585|EPCAM|4072|epithelial cell adhesion molecule	BC014785|EPCAM|4072|epithelial cell adhesion molecule	M26481|EPCAM|4072|epithelial cell adhesion molecule	M32325|EPCAM|4072|epithelial cell adhesion molecule	X14758|EPCAM|4072|epithelial cell adhesion molecule	M33011|EPCAM|4072|epithelial cell adhesion molecule	M32306|EPCAM|4072|epithelial cell adhesion molecule	DQ891338|EPCAM|4072|epithelial cell adhesion molecule	DQ894520|EPCAM|4072|epithelial cell adhesion molecule	CR542259|EPCAM|4072|epithelial cell adhesion molecule	CR542283|EPCAM|4072|epithelial cell adhesion molecule
hg18_v1_chr2_-_44440358_44440391	0.0459112	LHX3,4.p2	BC143061|PREPL|9581|prolyl endopeptidase-like	BC143062|PREPL|9581|prolyl endopeptidase-like	DQ023506|PREPL|9581|prolyl endopeptidase-like	DQ023507|PREPL|9581|prolyl endopeptidase-like	NM_001042385|PREPL|9581|prolyl endopeptidase-like	NM_001042386|PREPL|9581|prolyl endopeptidase-like
hg18_v1_chr12_+_70618892_70619023	0.0455798	LHX3,4.p2	AY098914|TPH2|121278|tryptophan hydroxylase 2	NM_173353|TPH2|121278|tryptophan hydroxylase 2	BC114442|TPH2|121278|tryptophan hydroxylase 2	BC114499|TPH2|121278|tryptophan hydroxylase 2	AK094614|TPH2|121278|tryptophan hydroxylase 2
hg18_v1_chr3_-_115960807_115960813	0.0455224	LHX3,4.p2	AK225788|ZBTB20|26137|zinc finger and BTB domain containing 20	NM_001164344|ZBTB20|26137|zinc finger and BTB domain containing 20	NM_001164345|ZBTB20|26137|zinc finger and BTB domain containing 20
hg18_v1_chr12_-_89922875_89922881	0.0455162	LHX3,4.p2	U59111|EPYC|1833|epiphycan
hg18_v1_chrX_+_49223101_49223111	0.0454515	LHX3,4.p2	CR542236|GAGE4|2576|G antigen 4	DQ891160|GAGE5|2577|G antigen 5	NM_001098405|GAGE12F|100008586|G antigen 12F	U19144|GAGE3|2575|G antigen 3	BC069086|GAGE7|2579|G antigen 7
hg18_v1_chr1_+_175406685_175406718	0.045339	LHX3,4.p2	AK296524|FAM5B|57795|family with sequence similarity 5, member B
hg18_v1_chr19_+_61039755_61039755	0.0453259	LHX3,4.p2	AK315003|NLRP4|147945|NLR family, pyrin domain containing 4	NM_134444|NLRP4|147945|NLR family, pyrin domain containing 4
hg18_v1_chr13_-_59223074_59223216	0.0453201	LHX3,4.p2	
hg18_v1_chr1_-_35223489_35223506	0.0449274	LHX3,4.p2	BC029439|LOC100506144|100506144|hypothetical protein LOC100506144
hg18_v1_chr9_-_28709302_28709302	0.0446731	LHX3,4.p2	AK056372|LINGO2|158038|leucine rich repeat and Ig domain containing 2	NM_152570|LINGO2|158038|leucine rich repeat and Ig domain containing 2
hg18_v1_chr10_-_108448990_108449109	0.0446138	LHX3,4.p2	AK123752|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1
hg18_v1_chr3_+_113200696_113200959	0.0444867	LHX3,4.p2	NM_001008273|TAGLN3|29114|transgelin 3	CR591700|TAGLN3|29114|transgelin 3	AF112201|TAGLN3|29114|transgelin 3	BT007408|TAGLN3|29114|transgelin 3
hg18_v1_chr1_-_159257567_159257594	0.044199	LHX3,4.p2	CR617107|F11R|50848|F11 receptor	CR608619|F11R|50848|F11 receptor
hg18_v1_chr8_-_17624009_17624009	0.0441164	LHX3,4.p2	AK125188|MTUS1|57509|microtubule associated tumor suppressor 1	NM_001001931|MTUS1|57509|microtubule associated tumor suppressor 1
hg18_v1_chr12_-_89922888_89922933	0.04397	LHX3,4.p2	AK290642|EPYC|1833|epiphycan	BC030958|EPYC|1833|epiphycan	NM_004950|EPYC|1833|epiphycan
hg18_v1_chr4_+_176076083_176076133	0.043559	LHX3,4.p2	NM_001130703|ADAM29|11086|ADAM metallopeptidase domain 29	NM_001130704|ADAM29|11086|ADAM metallopeptidase domain 29	NM_001130705|ADAM29|11086|ADAM metallopeptidase domain 29	NM_014269|ADAM29|11086|ADAM metallopeptidase domain 29	AK292410|ADAM29|11086|ADAM metallopeptidase domain 29	BC036070|ADAM29|11086|ADAM metallopeptidase domain 29
hg18_v1_chrX_-_19898302_19898302	0.0434836	LHX3,4.p2	NM_198279|CXorf23|256643|chromosome X open reading frame 23
hg18_v1_chr6_-_26216299_26216343	0.043479	LHX3,4.p2	EU446962|HIST1H1T|3010|histone cluster 1, H1t	BC130350|HIST1H1T|3010|histone cluster 1, H1t	BC069517|HIST1H1T|3010|histone cluster 1, H1t	NM_005323|HIST1H1T|3010|histone cluster 1, H1t
hg18_v1_chr17_+_3065661_3065664	0.0434298	LHX3,4.p2	BC069169|OR1A1|8383|olfactory receptor, family 1, subfamily A, member 1	BC128248|OR1A1|8383|olfactory receptor, family 1, subfamily A, member 1	BC141934|OR1A1|8383|olfactory receptor, family 1, subfamily A, member 1	BC141935|OR1A1|8383|olfactory receptor, family 1, subfamily A, member 1	NM_014565|OR1A1|8383|olfactory receptor, family 1, subfamily A, member 1
hg18_v1_chr20_-_13919256_13919261	0.0430975	LHX3,4.p2	BC035741|SEL1L2|80343|sel-1 suppressor of lin-12-like 2 (C. elegans)	AK302170|SEL1L2|80343|sel-1 suppressor of lin-12-like 2 (C. elegans)	NM_025229|SEL1L2|80343|sel-1 suppressor of lin-12-like 2 (C. elegans)
hg18_v1_chrX_-_115508164_115508191	0.0429211	LHX3,4.p2	BC062223|CXorf61|203413|chromosome X open reading frame 61	NM_001017978|CXorf61|203413|chromosome X open reading frame 61	AK000618|CXorf61|203413|chromosome X open reading frame 61	AK026566|CXorf61|203413|chromosome X open reading frame 61
hg18_v1_chr15_-_73705773_73705773	0.0428774	LHX3,4.p2	NM_001042588|SNUPN|10073|snurportin 1
hg18_v1_chr3_+_171112053_171112175	0.0426624	LHX3,4.p2	BX648991|SAMD7|344658|sterile alpha motif domain containing 7	BX648534|SAMD7|344658|sterile alpha motif domain containing 7	BX648989|SAMD7|344658|sterile alpha motif domain containing 7	BX537903|SAMD7|344658|sterile alpha motif domain containing 7	NM_182610|SAMD7|344658|sterile alpha motif domain containing 7
hg18_v1_chr7_+_150044530_150044681	0.0424055	LHX3,4.p2	AK091818|GIMAP1|170575|GTPase, IMAP family member 1	NM_130759|GIMAP1|170575|GTPase, IMAP family member 1	AK315127|GIMAP1|170575|GTPase, IMAP family member 1	AJ306287|GIMAP1|170575|GTPase, IMAP family member 1	BC040736|GIMAP1|170575|GTPase, IMAP family member 1
hg18_v1_chrX_+_23982981_23982989	0.04224	LHX3,4.p2	BC019906|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa	NM_001415|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa
hg18_v1_chr5_+_69356827_69357015	0.0418906	LHX3,4.p2	NM_021967|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	NM_022968|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC021174|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	NM_001178087|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	NM_022978|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	AF073519|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	AF073518|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC035932|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	CR626737|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC093880|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC171749|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC101970|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC103687|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC104738|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC143260|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC093882|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC143255|SERF1B|728492|small EDRK-rich factor 1B (centromeric)
hg18_v1_chr1_+_158441738_158441768	0.041125	LHX3,4.p2	NM_003768|PEA15|8682|phosphoprotein enriched in astrocytes 15	BC022554|PEA15|8682|phosphoprotein enriched in astrocytes 15
hg18_v1_chr1_+_119712918_119713016	0.0410255	LHX3,4.p2	AK298289|HAO2|51179|hydroxyacid oxidase 2 (long chain)	NM_001005783|HAO2|51179|hydroxyacid oxidase 2 (long chain)	NM_016527|HAO2|51179|hydroxyacid oxidase 2 (long chain)	BC020863|HAO2|51179|hydroxyacid oxidase 2 (long chain)	AF231917|HAO2|51179|hydroxyacid oxidase 2 (long chain)	AF203975|HAO2|51179|hydroxyacid oxidase 2 (long chain)	AY513277|HAO2|51179|hydroxyacid oxidase 2 (long chain)
hg18_v1_chr11_-_55994548_55994589	0.0408705	LHX3,4.p2	NM_001004742|OR5M3|219482|olfactory receptor, family 5, subfamily M, member 3	BC136982|OR5M3|219482|olfactory receptor, family 5, subfamily M, member 3	BC136983|OR5M3|219482|olfactory receptor, family 5, subfamily M, member 3
hg18_v1_chr19_+_45563594_45563601	0.0407084	LHX3,4.p2	CR596227|PLD3|23646|phospholipase D family, member 3
hg18_v1_chr12_+_111408667_111408737	0.0405732	LHX3,4.p2	
hg18_v1_chr19_+_45563603_45563604	0.0403896	LHX3,4.p2	CR600026|PLD3|23646|phospholipase D family, member 3
hg18_v1_chr10_-_50269912_50269912	0.0402989	LHX3,4.p2	NM_001080520|DRGX|644168|dorsal root ganglia homeobox
hg18_v1_chr9_-_14304036_14304145	0.0400134	LHX3,4.p2	BX648845|NFIB|4781|nuclear factor I/B	NM_001190737|NFIB|4781|nuclear factor I/B	NM_005596|NFIB|4781|nuclear factor I/B
hg18_v1_chr2_+_228064531_228064539	0.0399989	LHX3,4.p2	AK295030|AGFG1|3267|ArfGAP with FG repeats 1
hg18_v1_chr2_-_99238001_99238001	0.0399313	LHX3,4.p2	NM_175735|LYG2|254773|lysozyme G-like 2
hg18_v1_chr3_-_12916547_12916670	0.0398866	LHX3,4.p2	BC008088|IQSEC1|9922|IQ motif and Sec7 domain 1	AF055004|IQSEC1|9922|IQ motif and Sec7 domain 1
hg18_v1_chr10_+_112826774_112826910	0.0394182	LHX3,4.p2	NM_000681|ADRA2A|150|adrenergic, alpha-2A-, receptor	AF284095|ADRA2A|150|adrenergic, alpha-2A-, receptor
hg18_v1_chr8_+_67201684_67202105	0.039315	LHX3,4.p2	AK091310|TRIM55|84675|tripartite motif containing 55	AJ243488|TRIM55|84675|tripartite motif containing 55	AJ243489|TRIM55|84675|tripartite motif containing 55	AJ277493|TRIM55|84675|tripartite motif containing 55	AJ431704|TRIM55|84675|tripartite motif containing 55	NM_033058|TRIM55|84675|tripartite motif containing 55	NM_184085|TRIM55|84675|tripartite motif containing 55	NM_184086|TRIM55|84675|tripartite motif containing 55	NM_184087|TRIM55|84675|tripartite motif containing 55	AJ291712|TRIM55|84675|tripartite motif containing 55	BC007750|TRIM55|84675|tripartite motif containing 55	AK091728|TRIM55|84675|tripartite motif containing 55	BT007212|TRIM55|84675|tripartite motif containing 55
hg18_v1_chr9_-_98580148_98580201	0.0392015	LHX3,4.p2	AB023189|ZNF510|22869|zinc finger protein 510	NM_014930|ZNF510|22869|zinc finger protein 510	BC036676|ZNF510|22869|zinc finger protein 510	BC068587|ZNF510|22869|zinc finger protein 510	BC058022|ZNF510|22869|zinc finger protein 510	AK292600|ZNF510|22869|zinc finger protein 510
hg18_v1_chr2_-_188021117_188021265	0.0391301	LHX3,4.p2	DQ280491|CALCRL|10203|calcitonin receptor-like	U17473|CALCRL|10203|calcitonin receptor-like	L76380|CALCRL|10203|calcitonin receptor-like	AK291630|CALCRL|10203|calcitonin receptor-like	AK292998|CALCRL|10203|calcitonin receptor-like	NM_005795|CALCRL|10203|calcitonin receptor-like
hg18_v1_chr11_+_44026106_44026140	0.0389976	LHX3,4.p2	AB231734|ACCSL|390110|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)-like	NM_001031854|ACCSL|390110|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)-like	BC144554|ACCSL|390110|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)-like
hg18_v1_chr3_-_48105637_48105772	0.0388634	LHX3,4.p2	AK054577|MAP4|4134|microtubule-associated protein 4	NM_001134364|MAP4|4134|microtubule-associated protein 4	NM_002375|MAP4|4134|microtubule-associated protein 4	NM_030885|MAP4|4134|microtubule-associated protein 4
hg18_v1_chr19_+_43847049_43847181	0.0386295	LHX3,4.p2	
hg18_v1_chr4_+_169250281_169250426	0.0384818	LHX3,4.p2	BC007320|ANXA10|11199|annexin A10	NM_007193|ANXA10|11199|annexin A10	AF196478|ANXA10|11199|annexin A10	AJ238979|ANXA10|11199|annexin A10	EU176730|ANXA10|11199|annexin A10
hg18_v1_chrX_+_36936352_36936352	0.0381374	LHX3,4.p2	NM_001013736|FAM47C|442444|family with sequence similarity 47, member C
hg18_v1_chr15_-_54175954_54176025	0.038097	LHX3,4.p2	AL832584|RFX7|64864|regulatory factor X, 7
hg18_v1_chr1_+_205038837_205038862	0.0378587	LHX3,4.p2	AY040367|IL19|29949|interleukin 19	NM_153758|IL19|29949|interleukin 19
hg18_v1_chr16_+_68238460_68238571	0.0376707	LHX3,4.p2	AF134870|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive
hg18_v1_chr16_+_10430225_10430258	0.0376674	LHX3,4.p2	NM_024997|ATF7IP2|80063|activating transcription factor 7 interacting protein 2	BC137079|ATF7IP2|80063|activating transcription factor 7 interacting protein 2	BC144468|ATF7IP2|80063|activating transcription factor 7 interacting protein 2
hg18_v1_chr1_+_150948146_150948146	0.0374873	LHX3,4.p2	BC113446|LCE4A|199834|late cornified envelope 4A	BC113448|LCE4A|199834|late cornified envelope 4A	NM_178356|LCE4A|199834|late cornified envelope 4A
hg18_v1_chr19_+_45563637_45563651	0.0373743	LHX3,4.p2	CR617265|PLD3|23646|phospholipase D family, member 3
hg18_v1_chr14_+_19473606_19473606	0.0373363	LHX3,4.p2	BC151145|OR4K1|79544|olfactory receptor, family 4, subfamily K, member 1	NM_001004063|OR4K1|79544|olfactory receptor, family 4, subfamily K, member 1
hg18_v1_chr7_+_96583840_96583840	0.0373142	LHX3,4.p2	BC028409|ACN9|57001|ACN9 homolog (S. cerevisiae)	NM_020186|ACN9|57001|ACN9 homolog (S. cerevisiae)
hg18_v1_chr1_-_35223515_35223538	0.0371511	LHX3,4.p2	NM_001195156|LOC100506144|100506144|hypothetical protein LOC100506144
hg18_v1_chr1_-_110752068_110752086	0.0366738	LHX3,4.p2	NM_006402|HBXIP|10542|hepatitis B virus x interacting protein	BC062619|HBXIP|10542|hepatitis B virus x interacting protein
hg18_v1_chr1_-_39119845_39119875	0.0362989	LHX3,4.p2	AK312811|GJA9|81025|gap junction protein, alpha 9, 59kDa	BC051675|GJA9-MYCBP|100527950|GJA9-MYCBP read-through transcript	AK123051|GJA9-MYCBP|100527950|GJA9-MYCBP read-through transcript	NM_030772|GJA9|81025|gap junction protein, alpha 9, 59kDa
hg18_v1_chr14_-_57133361_57133367	0.036067	LHX3,4.p2	BC101318|SLC35F4|341880|solute carrier family 35, member F4	BC101319|SLC35F4|341880|solute carrier family 35, member F4	BC101320|SLC35F4|341880|solute carrier family 35, member F4	BC101321|SLC35F4|341880|solute carrier family 35, member F4	NM_001080455|SLC35F4|341880|solute carrier family 35, member F4
hg18_v1_chr1_+_205344200_205344345	0.0359131	LHX3,4.p2	BC022312|C4BPA|722|complement component 4 binding protein, alpha	NM_000715|C4BPA|722|complement component 4 binding protein, alpha	AK303798|C4BPA|722|complement component 4 binding protein, alpha	AK313164|C4BPA|722|complement component 4 binding protein, alpha	M31452|C4BPA|722|complement component 4 binding protein, alpha	AK303793|C4BPA|722|complement component 4 binding protein, alpha
hg18_v1_chr10_-_21226536_21226536	0.0357687	LHX3,4.p2	NM_006393|NEBL|10529|nebulette	Y16241|NEBL|10529|nebulette
hg18_v1_chr2_-_61960984_61961005	0.0356161	LHX3,4.p2	CR615372|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)
hg18_v1_chr10_-_64246080_64246127	0.035563	LHX3,4.p2	AK091399|EGR2|1959|early growth response 2	BC035625|EGR2|1959|early growth response 2	CR749641|EGR2|1959|early growth response 2
hg18_v1_chr10_+_18280773_18280897	0.0355384	LHX3,4.p2	NM_001145195|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12	NM_152725|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12	AK055061|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12	BC035118|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12	BC047635|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12	AK295294|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12	BC094700|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12
hg18_v1_chr1_+_209586328_209586328	0.0352853	LHX3,4.p2	BC029600|TRAF5|7188|TNF receptor-associated factor 5	NM_145759|TRAF5|7188|TNF receptor-associated factor 5
hg18_v1_chr5_-_156525756_156525856	0.0350004	LHX3,4.p2	AY973323|FAM71B|153745|family with sequence similarity 71, member B	AF465821|FAM71B|153745|family with sequence similarity 71, member B	BC025397|FAM71B|153745|family with sequence similarity 71, member B	AK057543|FAM71B|153745|family with sequence similarity 71, member B	BC022035|FAM71B|153745|family with sequence similarity 71, member B	BC025409|FAM71B|153745|family with sequence similarity 71, member B	BC025998|FAM71B|153745|family with sequence similarity 71, member B	NM_130899|FAM71B|153745|family with sequence similarity 71, member B
hg18_v1_chr14_-_76958984_76959151	0.0349185	LHX3,4.p2	NM_138791|C14orf148|122945|chromosome 14 open reading frame 148	BC066965|C14orf148|122945|chromosome 14 open reading frame 148	NM_001113475|C14orf148|122945|chromosome 14 open reading frame 148	AK057371|C14orf148|122945|chromosome 14 open reading frame 148
hg18_v1_chr5_+_76470829_76470856	0.034873	LHX3,4.p2	
hg18_v1_chr1_-_149004879_149004905	0.0348241	LHX3,4.p2	CR607339|CTSS|1520|cathepsin S	AK301472|CTSS|1520|cathepsin S	AK314482|CTSS|1520|cathepsin S
hg18_v1_chr6_+_29187565_29187646	0.0347645	LHX3,4.p2	BC136973|OR2J3|442186|olfactory receptor, family 2, subfamily J, member 3	BC136975|OR2J3|442186|olfactory receptor, family 2, subfamily J, member 3	NM_001005216|OR2J3|442186|olfactory receptor, family 2, subfamily J, member 3
hg18_v1_chr3_-_152541129_152541274	0.0345353	LHX3,4.p2	AF313449|P2RY12|64805|purinergic receptor P2Y, G-protein coupled, 12	AF321815|P2RY12|64805|purinergic receptor P2Y, G-protein coupled, 12	NM_176876|P2RY12|64805|purinergic receptor P2Y, G-protein coupled, 12
hg18_v1_chr1_+_66570363_66570520	0.0342675	LHX3,4.p2	NM_001037339|PDE4B|5142|phosphodiesterase 4B, cAMP-specific	M97515|PDE4B|5142|phosphodiesterase 4B, cAMP-specific	L12686|PDE4B|5142|phosphodiesterase 4B, cAMP-specific
hg18_v1_chr3_-_195670256_195670256	0.0341273	LHX3,4.p2	NM_024524|ATP13A3|79572|ATPase type 13A3
hg18_v1_chrX_-_119550402_119550441	0.0339674	LHX3,4.p2	CR603224|CUL4B|8450|cullin 4B
hg18_v1_chr3_-_126412882_126412932	0.0337055	LHX3,4.p2	AF345197|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8	BC126158|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8	BC126160|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8	AF390442|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8	NM_001195483|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8
hg18_v1_chr1_-_13263334_13263351	0.0336508	LHX3,4.p2	BC140755|PRAMEF7|441871|PRAME family member 7	NM_001012276|PRAMEF8|391002|PRAME family member 8
hg18_v1_chr15_-_38953628_38953850	0.0335578	LHX3,4.p2	AY059636|RHOV|171177|ras homolog gene family, member V	CR615243|RHOV|171177|ras homolog gene family, member V	BC112945|RHOV|171177|ras homolog gene family, member V	CR618466|RHOV|171177|ras homolog gene family, member V	BC019353|RHOV|171177|ras homolog gene family, member V	BC105020|RHOV|171177|ras homolog gene family, member V	BC105022|RHOV|171177|ras homolog gene family, member V	AB079131|RHOV|171177|ras homolog gene family, member V	CR599960|RHOV|171177|ras homolog gene family, member V	NM_133639|RHOV|171177|ras homolog gene family, member V
hg18_v1_chr22_+_21042091_21042390	0.0334825	LHX3,4.p2	BC030984|IGLV1-44|28823|immunoglobulin lambda variable 1-44	DQ892642|IGL@|3535|immunoglobulin lambda locus	DQ895879|IGL@|3535|immunoglobulin lambda locus	U96394|IGLV1-44|28823|immunoglobulin lambda variable 1-44
hg18_v1_chr10_+_17310263_17310263	0.0330503	LHX3,4.p2	NM_003380|VIM|7431|vimentin
hg18_v1_chr19_+_35124951_35125293	0.0328869	LHX3,4.p2	AK226173|C19orf2|8725|chromosome 19 open reading frame 2	CR606677|C19orf2|8725|chromosome 19 open reading frame 2	AF091095|C19orf2|8725|chromosome 19 open reading frame 2	AK292170|C19orf2|8725|chromosome 19 open reading frame 2	BC067259|C19orf2|8725|chromosome 19 open reading frame 2	AK314313|C19orf2|8725|chromosome 19 open reading frame 2	AK001437|C19orf2|8725|chromosome 19 open reading frame 2	NM_003796|C19orf2|8725|chromosome 19 open reading frame 2	NM_134447|C19orf2|8725|chromosome 19 open reading frame 2
hg18_v1_chr7_+_143457083_143457138	0.0328801	LHX3,4.p2	BC136889|OR2A14|135941|olfactory receptor, family 2, subfamily A, member 14	NM_001001659|OR2A14|135941|olfactory receptor, family 2, subfamily A, member 14
hg18_v1_chr11_-_114593838_114593879	0.0324337	LHX3,4.p2	AY309502|CADM1|23705|cell adhesion molecule 1
hg18_v1_chr10_-_21847126_21847194	0.0322304	LHX3,4.p2	
hg18_v1_chr1_+_151240846_151240870	0.0321501	LHX3,4.p2	NM_001097589|SPRR3|6707|small proline-rich protein 3	NM_005416|SPRR3|6707|small proline-rich protein 3	AK311823|SPRR3|6707|small proline-rich protein 3	BC017802|SPRR3|6707|small proline-rich protein 3	EF553525|SPRR3|6707|small proline-rich protein 3	AJ243667|SPRR3|6707|small proline-rich protein 3	AY118269|SPRR3|6707|small proline-rich protein 3
hg18_v1_chr14_+_75907442_75907442	0.031644	LHX3,4.p2	NM_004452|ESRRB|2103|estrogen-related receptor beta
hg18_v1_chr5_-_131733094_131733302	0.0316303	LHX3,4.p2	BX538252|LOC553103|553103|hypothetical LOC553103
hg18_v1_chr5_-_160044844_160044991	0.0314313	LHX3,4.p2	AK025130|ATP10B|23120|ATPase, class V, type 10B
hg18_v1_chr3_-_87408301_87408426	0.0313219	LHX3,4.p2	L18781|POU1F1|5449|POU class 1 homeobox 1	X72215|POU1F1|5449|POU class 1 homeobox 1	X62429|POU1F1|5449|POU class 1 homeobox 1	D10216|POU1F1|5449|POU class 1 homeobox 1	NM_000306|POU1F1|5449|POU class 1 homeobox 1	NM_001122757|POU1F1|5449|POU class 1 homeobox 1
hg18_v1_chr10_+_97793054_97793689	0.0313124	LHX3,4.p2	BC043175|CCNJ|54619|cyclin J	NM_001134375|CCNJ|54619|cyclin J	NM_001134376|CCNJ|54619|cyclin J	NM_019084|CCNJ|54619|cyclin J	AK092360|CCNJ|54619|cyclin J	AK297264|CCNJ|54619|cyclin J
hg18_v1_chr3_+_113200275_113200591	0.0307072	LHX3,4.p2	NM_001008272|TAGLN3|29114|transgelin 3	NM_013259|TAGLN3|29114|transgelin 3	AF303058|TAGLN3|29114|transgelin 3	AF087855|TAGLN3|29114|transgelin 3	AK315289|TAGLN3|29114|transgelin 3	BC015329|TAGLN3|29114|transgelin 3	CR600116|TAGLN3|29114|transgelin 3
hg18_v1_chr20_+_58004811_58004823	0.0307045	LHX3,4.p2	BC062570|CDH26|60437|cadherin 26	NM_021810|CDH26|60437|cadherin 26	AK074477|CDH26|60437|cadherin 26
hg18_v1_chr4_+_71492581_71492628	0.0306977	LHX3,4.p2	AF209780|AMBN|258|ameloblastin (enamel matrix protein)	AF263464|AMBN|258|ameloblastin (enamel matrix protein)	AJ537437|AMBN|258|ameloblastin (enamel matrix protein)	NM_016519|AMBN|258|ameloblastin (enamel matrix protein)	AF219994|AMBN|258|ameloblastin (enamel matrix protein)	AK314918|AMBN|258|ameloblastin (enamel matrix protein)	BC106931|AMBN|258|ameloblastin (enamel matrix protein)	BC106932|AMBN|258|ameloblastin (enamel matrix protein)
hg18_v1_chrX_-_72351348_72351358	0.030465	LHX3,4.p2	BC026325|NAP1L2|4674|nucleosome assembly protein 1-like 2
hg18_v1_chr1_-_54183833_54183875	0.0304441	LHX3,4.p2	AK225916|HSPB11|51668|heat shock protein family B (small), member 11	AF100747|HSPB11|51668|heat shock protein family B (small), member 11	BC005245|HSPB11|51668|heat shock protein family B (small), member 11	NM_016126|HSPB11|51668|heat shock protein family B (small), member 11
hg18_v1_chr14_-_93665668_93665675	0.0304041	LHX3,4.p2	BC032626|IFI27L2|83982|interferon, alpha-inducible protein 27-like 2	AF208232|IFI27L2|83982|interferon, alpha-inducible protein 27-like 2
hg18_v1_chr6_-_49712483_49712545	0.0303914	LHX3,4.p2	AF031548|RHAG|6005|Rh-associated glycoprotein	DQ892782|RHAG|6005|Rh-associated glycoprotein	DQ896030|RHAG|6005|Rh-associated glycoprotein	CR621033|RHAG|6005|Rh-associated glycoprotein	AF031549|RHAG|6005|Rh-associated glycoprotein	AF178841|RHAG|6005|Rh-associated glycoprotein	AF179682|RHAG|6005|Rh-associated glycoprotein	AF179684|RHAG|6005|Rh-associated glycoprotein	AF179685|RHAG|6005|Rh-associated glycoprotein	AF187847|RHAG|6005|Rh-associated glycoprotein	BC012605|RHAG|6005|Rh-associated glycoprotein	X64594|RHAG|6005|Rh-associated glycoprotein	AK313505|RHAG|6005|Rh-associated glycoprotein	NM_000324|RHAG|6005|Rh-associated glycoprotein
hg18_v1_chrX_+_55666557_55666557	0.0301531	LHX3,4.p2	BC012934|FOXR2|139628|forkhead box R2	NM_198451|FOXR2|139628|forkhead box R2
hg18_v1_chr6_+_26195426_26195645	0.0299844	LHX3,4.p2	U60319|HFE|3077|hemochromatosis	AJ249335|HFE|3077|hemochromatosis	AJ249336|HFE|3077|hemochromatosis	AJ249337|HFE|3077|hemochromatosis	AJ249338|HFE|3077|hemochromatosis	AJ250635|HFE|3077|hemochromatosis	NM_000410|HFE|3077|hemochromatosis	NM_139003|HFE|3077|hemochromatosis	NM_139004|HFE|3077|hemochromatosis	NM_139006|HFE|3077|hemochromatosis	NM_139007|HFE|3077|hemochromatosis	NM_139008|HFE|3077|hemochromatosis	NM_139009|HFE|3077|hemochromatosis	NM_139010|HFE|3077|hemochromatosis	NM_139011|HFE|3077|hemochromatosis	AF144242|HFE|3077|hemochromatosis	AF144243|HFE|3077|hemochromatosis	AF144244|HFE|3077|hemochromatosis	AF144245|HFE|3077|hemochromatosis	BC074721|HFE|3077|hemochromatosis	AF149804|HFE|3077|hemochromatosis	AF150664|HFE|3077|hemochromatosis	AF079407|HFE|3077|hemochromatosis	AF079408|HFE|3077|hemochromatosis	AF079409|HFE|3077|hemochromatosis	BC117201|HFE|3077|hemochromatosis	BC117203|HFE|3077|hemochromatosis	AK293393|HFE|3077|hemochromatosis	AK316502|HFE|3077|hemochromatosis	AF115265|HFE|3077|hemochromatosis	AF115264|HFE|3077|hemochromatosis	AK300933|HFE|3077|hemochromatosis
hg18_v1_chrX_+_100111352_100111352	0.0298736	LHX3,4.p2	AK301813|ARL13A|392509|ADP-ribosylation factor-like 13A	NM_001012990|ARL13A|392509|ADP-ribosylation factor-like 13A	NM_001162490|ARL13A|392509|ADP-ribosylation factor-like 13A	NM_001162491|ARL13A|392509|ADP-ribosylation factor-like 13A
hg18_v1_chr21_-_30786145_30786189	0.0298289	LHX3,4.p2	AF139541|KRTAP19-3|337970|keratin associated protein 19-3	NM_181609|KRTAP19-3|337970|keratin associated protein 19-3	AB096944|KRTAP19-3|337970|keratin associated protein 19-3	BC126280|KRTAP19-3|337970|keratin associated protein 19-3	BC126282|KRTAP19-3|337970|keratin associated protein 19-3
hg18_v1_chr1_+_209622781_209622801	0.0297582	LHX3,4.p2	BC005997|C1orf97|84791|chromosome 1 open reading frame 97	CR599004|C1orf97|84791|chromosome 1 open reading frame 97
hg18_v1_chr14_+_102921446_102921466	0.0297501	LHX3,4.p2	NM_001128918|MARK3|4140|MAP/microtubule affinity-regulating kinase 3	NM_001128919|MARK3|4140|MAP/microtubule affinity-regulating kinase 3	NM_001128920|MARK3|4140|MAP/microtubule affinity-regulating kinase 3	NM_001128921|MARK3|4140|MAP/microtubule affinity-regulating kinase 3	NM_002376|MARK3|4140|MAP/microtubule affinity-regulating kinase 3
hg18_v1_chr19_+_44591589_44591677	0.0295055	LHX3,4.p2	
hg18_v1_chr6_-_49820030_49820126	0.0293779	LHX3,4.p2	AK223380|CRISP3|10321|cysteine-rich secretory protein 3	X94323|CRISP3|10321|cysteine-rich secretory protein 3	AK303966|CRISP3|10321|cysteine-rich secretory protein 3	AK313387|CRISP3|10321|cysteine-rich secretory protein 3	AK292786|CRISP3|10321|cysteine-rich secretory protein 3	NM_001190986|CRISP3|10321|cysteine-rich secretory protein 3	NM_006061|CRISP3|10321|cysteine-rich secretory protein 3
hg18_v1_chr1_+_44230011_44230215	0.0293632	LHX3,4.p2	CR619815|CCDC24|149473|coiled-coil domain containing 24	AY487420|CCDC24|149473|coiled-coil domain containing 24
hg18_v1_chr14_+_28305922_28306037	0.0292894	LHX3,4.p2	X74142|FOXG1|2290|forkhead box G1	X74143|FOXG1|2290|forkhead box G1	NM_005249|FOXG1|2290|forkhead box G1
hg18_v1_chr3_+_173954940_173955053	0.0292506	LHX3,4.p2	BC112086|ECT2|1894|epithelial cell transforming sequence 2 oncogene	AK023267|ECT2|1894|epithelial cell transforming sequence 2 oncogene	NM_018098|ECT2|1894|epithelial cell transforming sequence 2 oncogene	DQ847274|ECT2|1894|epithelial cell transforming sequence 2 oncogene
hg18_v1_chr11_+_55162409_55162409	0.0289785	LHX3,4.p2	NM_001004124|OR4P4|81300|olfactory receptor, family 4, subfamily P, member 4
hg18_v1_chrX_-_55225668_55225668	0.0287096	LHX3,4.p2	NM_001190708|MTRNR2L10|100463488|MT-RNR2-like 10
hg18_v1_chr15_-_43280664_43280664	0.0285561	LHX3,4.p2	AK096267|SHF|90525|Src homology 2 domain containing F	NM_138356|SHF|90525|Src homology 2 domain containing F
hg18_v1_chr8_+_144444909_144445186	0.0279886	LHX3,4.p2	NM_030895|ZNF696|79943|zinc finger protein 696	AK024191|ZNF696|79943|zinc finger protein 696	BC126317|ZNF696|79943|zinc finger protein 696
hg18_v1_chr1_+_204710208_204710208	0.027842	LHX3,4.p2	NM_001193321|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon	NM_001193322|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon	NM_014002|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon
hg18_v1_chr6_+_43846372_43846652	0.0277131	LHX3,4.p2	BC011177|VEGFA|7422|vascular endothelial growth factor A	BC065522|VEGFA|7422|vascular endothelial growth factor A
hg18_v1_chr1_+_211190476_211190605	0.0276324	LHX3,4.p2	AK290973|VASH2|79805|vasohibin 2	NM_001136474|VASH2|79805|vasohibin 2	NM_001136475|VASH2|79805|vasohibin 2	NM_024749|VASH2|79805|vasohibin 2	AK022567|VASH2|79805|vasohibin 2	AK096605|VASH2|79805|vasohibin 2	BC053836|VASH2|79805|vasohibin 2	BC051856|VASH2|79805|vasohibin 2	BC028194|VASH2|79805|vasohibin 2
hg18_v1_chr3_+_149930656_149930656	0.0275674	LHX3,4.p2	NM_032049|AGTR1|185|angiotensin II receptor, type 1
hg18_v1_chrX_-_102829595_102829613	0.0273792	LHX3,4.p2	CR625600|MORF4L2|9643|mortality factor 4 like 2	CR610517|MORF4L2|9643|mortality factor 4 like 2
hg18_v1_chr1_-_35223510_35223514	0.0273697	LHX3,4.p2	AK129824|LOC100506144|100506144|hypothetical protein LOC100506144
hg18_v1_chrX_+_102727068_102727155	0.0273327	LHX3,4.p2	NM_001006935|TCEAL4|79921|transcription elongation factor A (SII)-like 4	NM_001006937|TCEAL4|79921|transcription elongation factor A (SII)-like 4	NM_024863|TCEAL4|79921|transcription elongation factor A (SII)-like 4	AL833640|TCEAL4|79921|transcription elongation factor A (SII)-like 4	AK024827|TCEAL4|79921|transcription elongation factor A (SII)-like 4	AK225117|TCEAL4|79921|transcription elongation factor A (SII)-like 4	AK093021|TCEAL4|79921|transcription elongation factor A (SII)-like 4	AF271783|TCEAL4|79921|transcription elongation factor A (SII)-like 4	AY885169|TCEAL4|79921|transcription elongation factor A (SII)-like 4	BC012296|TCEAL4|79921|transcription elongation factor A (SII)-like 4	CR594284|TCEAL4|79921|transcription elongation factor A (SII)-like 4
hg18_v1_chr17_+_17952744_17952744	0.0272674	LHX3,4.p2	AF144094|MYO15A|51168|myosin XVA	NM_016239|MYO15A|51168|myosin XVA
hg18_v1_chr14_-_56342097_56342097	0.0271907	LHX3,4.p2	NM_172337|OTX2|5015|orthodenticle homeobox 2
hg18_v1_chrX_+_123062143_123062279	0.0271348	LHX3,4.p2	AK026678|STAG2|10735|stromal antigen 2
hg18_v1_chr10_+_18729518_18729621	0.0269305	LHX3,4.p2	NM_201570|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AK299873|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AK295113|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit
hg18_v1_chr6_-_31233518_31233544	0.0269113	LHX3,4.p2	AB112475|CCHCR1|54535|coiled-coil alpha-helical rod protein 1	NM_001105563|CCHCR1|54535|coiled-coil alpha-helical rod protein 1	NM_001105564|CCHCR1|54535|coiled-coil alpha-helical rod protein 1
hg18_v1_chr2_+_211050653_211050677	0.026581	LHX3,4.p2	NM_001122633|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	AB208800|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial
hg18_v1_chr16_+_51690564_51690637	0.0264359	LHX3,4.p2	AK092208|CHD9|80205|chromodomain helicase DNA binding protein 9	BC033770|CHD9|80205|chromodomain helicase DNA binding protein 9
hg18_v1_chr9_-_21472311_21472311	0.0261674	LHX3,4.p2	AY358570|IFNE|338376|interferon, epsilon	NM_176891|IFNE|338376|interferon, epsilon
hg18_v1_chr3_-_127810087_127810087	0.0261398	LHX3,4.p2	AB113648|TXNRD3IT1|645840|thioredoxin reductase 3 intronic transcript 1	NM_001039783|TXNRD3IT1|645840|thioredoxin reductase 3 intronic transcript 1
hg18_v1_chr6_-_31196174_31196230	0.0256923	LHX3,4.p2	DQ891583|CDSN|1041|corneodesmosin	DQ894777|CDSN|1041|corneodesmosin	BC031993|CDSN|1041|corneodesmosin	AF030130|CDSN|1041|corneodesmosin	L20815|CDSN|1041|corneodesmosin	AK292636|CDSN|1041|corneodesmosin	NM_001264|CDSN|1041|corneodesmosin
hg18_v1_chr8_-_29263714_29264265	0.025582	LHX3,4.p2	EU831463|DUSP4|1846|dual specificity phosphatase 4	EU831550|DUSP4|1846|dual specificity phosphatase 4	S80632|DUSP4|1846|dual specificity phosphatase 4	U48807|DUSP4|1846|dual specificity phosphatase 4	BC002671|DUSP4|1846|dual specificity phosphatase 4	U21108|DUSP4|1846|dual specificity phosphatase 4	BC014565|DUSP4|1846|dual specificity phosphatase 4	NM_001394|DUSP4|1846|dual specificity phosphatase 4	AK314820|DUSP4|1846|dual specificity phosphatase 4
hg18_v1_chr3_-_139960874_139960874	0.0254939	LHX3,4.p2	BC114432|PIK3CB|5291|phosphoinositide-3-kinase, catalytic, beta polypeptide	NM_006219|PIK3CB|5291|phosphoinositide-3-kinase, catalytic, beta polypeptide	S67334|PIK3CB|5291|phosphoinositide-3-kinase, catalytic, beta polypeptide
hg18_v1_chr8_+_17866373_17866408	0.0252841	LHX3,4.p2	AF068293|PCM1|5108|pericentriolar material 1
hg18_v1_chr17_-_10393664_10393741	0.0250319	LHX3,4.p2	NM_001100112|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult	BC093082|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult	AK299440|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult	AK300702|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult	AK308102|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult	BX510904|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult	NM_017534|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult
hg18_v1_chr16_+_4842077_4842216	0.0250081	LHX3,4.p2	NM_016936|UBN1|29855|ubinuclein 1	AF108461|UBN1|29855|ubinuclein 1
hg18_v1_chr14_+_61532293_61532490	0.0249121	LHX3,4.p2	AJ617628|SYT16|83851|synaptotagmin XVI	NM_031914|SYT16|83851|synaptotagmin XVI	BC117363|SYT16|83851|synaptotagmin XVI	BC143598|SYT16|83851|synaptotagmin XVI	AB102949|SYT16|83851|synaptotagmin XVI
hg18_v1_chr10_-_50402148_50402364	0.0248845	LHX3,4.p2	BC028954|PGBD3|267004|piggyBac transposable element derived 3	AK074682|PGBD3|267004|piggyBac transposable element derived 3	BC063690|PGBD3|267004|piggyBac transposable element derived 3	NM_170753|PGBD3|267004|piggyBac transposable element derived 3
hg18_v1_chr1_+_103999824_103999950	0.0247641	LHX3,4.p2	NM_004038|AMY1A|276|amylase, alpha 1A (salivary)	NM_001008219|AMY1C|278|amylase, alpha 1C (salivary)	NM_001008218|AMY1B|277|amylase, alpha 1B (salivary)	BC063129|AMY1A|276|amylase, alpha 1A (salivary)	BC070302|AMY1A|276|amylase, alpha 1A (salivary)	BC092444|AMY1A|276|amylase, alpha 1A (salivary)	BC132985|AMY1A|276|amylase, alpha 1A (salivary)	BC132987|AMY1A|276|amylase, alpha 1A (salivary)	BC132997|AMY1A|276|amylase, alpha 1A (salivary)	BC144452|AMY1A|276|amylase, alpha 1A (salivary)	BC132995|AMY1A|276|amylase, alpha 1A (salivary)
hg18_v1_chr8_-_116750427_116750592	0.0247584	LHX3,4.p2	AF183810|TRPS1|7227|trichorhinophalangeal syndrome I
hg18_v1_chr4_-_145159889_145159945	0.024567	LHX3,4.p2	AY509882|GYPB|2994|glycophorin B (MNS blood group)	AY950609|GYPB|2994|glycophorin B (MNS blood group)	AY950610|GYPB|2994|glycophorin B (MNS blood group)	AY950611|GYPB|2994|glycophorin B (MNS blood group)	U05255|GYPB|2994|glycophorin B (MNS blood group)	J02982|GYPB|2994|glycophorin B (MNS blood group)	BC121077|GYPB|2994|glycophorin B (MNS blood group)	BC121078|GYPB|2994|glycophorin B (MNS blood group)	EU338223|GYPB|2994|glycophorin B (MNS blood group)	EU338224|GYPB|2994|glycophorin B (MNS blood group)	EU338225|GYPB|2994|glycophorin B (MNS blood group)	EU338226|GYPB|2994|glycophorin B (MNS blood group)	EU338227|GYPB|2994|glycophorin B (MNS blood group)	EU338228|GYPB|2994|glycophorin B (MNS blood group)	EU338229|GYPB|2994|glycophorin B (MNS blood group)	EU338230|GYPB|2994|glycophorin B (MNS blood group)	EU338235|GYPB|2994|glycophorin B (MNS blood group)	EU338236|GYPB|2994|glycophorin B (MNS blood group)	EU338237|GYPB|2994|glycophorin B (MNS blood group)	EU338238|GYPB|2994|glycophorin B (MNS blood group)	BC069310|GYPB|2994|glycophorin B (MNS blood group)	X08055|GYPB|2994|glycophorin B (MNS blood group)	NM_002100|GYPB|2994|glycophorin B (MNS blood group)
hg18_v1_chr7_+_91762227_91762355	0.0245377	LHX3,4.p2	
hg18_v1_chr18_+_59405513_59405642	0.0243635	LHX3,4.p2	NM_012397|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	AK290323|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	AK313486|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	AK296797|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	AK303867|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	AK303979|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	AJ001696|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	AJ001697|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	AK298049|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	BC101821|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	BC143402|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	AJ001698|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13
hg18_v1_chr1_-_203320153_203320267	0.0241565	LHX3,4.p2	BC061592|TMEM81|388730|transmembrane protein 81	AY359081|TMEM81|388730|transmembrane protein 81	NM_203376|TMEM81|388730|transmembrane protein 81	AK303432|TMEM81|388730|transmembrane protein 81
hg18_v1_chr6_-_76838944_76839114	0.0241321	LHX3,4.p2	BC117450|IMPG1|3617|interphotoreceptor matrix proteoglycan 1	BC117452|IMPG1|3617|interphotoreceptor matrix proteoglycan 1	AF047492|IMPG1|3617|interphotoreceptor matrix proteoglycan 1	NM_001563|IMPG1|3617|interphotoreceptor matrix proteoglycan 1	CR749572|IMPG1|3617|interphotoreceptor matrix proteoglycan 1
hg18_v1_chr6_-_27943287_27943349	0.0241139	LHX3,4.p2	EU446959|HIST1H1B|3009|histone cluster 1, H1b	BC101583|HIST1H1B|3009|histone cluster 1, H1b	BC101581|HIST1H1B|3009|histone cluster 1, H1b	BC069101|HIST1H1B|3009|histone cluster 1, H1b	NM_005322|HIST1H1B|3009|histone cluster 1, H1b
hg18_v1_chr1_-_157551072_157551072	0.0239727	LHX3,4.p2	NM_001004467|OR10J3|441911|olfactory receptor, family 10, subfamily J, member 3
hg18_v1_chr15_+_71522551_71522574	0.0239434	LHX3,4.p2	NM_001042367|C15orf60|283677|chromosome 15 open reading frame 60	AK131030|C15orf60|283677|chromosome 15 open reading frame 60	BC055412|C15orf60|283677|chromosome 15 open reading frame 60
hg18_v1_chr20_+_55338221_55338297	0.02394	LHX3,4.p2	AF169385|SPO11|23626|SPO11 meiotic protein covalently bound to DSB homolog (S. cerevisiae)	NM_012444|SPO11|23626|SPO11 meiotic protein covalently bound to DSB homolog (S. cerevisiae)	NM_198265|SPO11|23626|SPO11 meiotic protein covalently bound to DSB homolog (S. cerevisiae)	BC033591|SPO11|23626|SPO11 meiotic protein covalently bound to DSB homolog (S. cerevisiae)	AF149310|SPO11|23626|SPO11 meiotic protein covalently bound to DSB homolog (S. cerevisiae)
hg18_v1_chr3_+_195336631_195336667	0.0239182	LHX3,4.p2	AK300482|HES1|3280|hairy and enhancer of split 1, (Drosophila)	CR616000|HES1|3280|hairy and enhancer of split 1, (Drosophila)	CR610974|HES1|3280|hairy and enhancer of split 1, (Drosophila)	CR609648|HES1|3280|hairy and enhancer of split 1, (Drosophila)	BC039152|HES1|3280|hairy and enhancer of split 1, (Drosophila)
hg18_v1_chrX_-_72351392_72351434	0.0238822	LHX3,4.p2	AK291297|NAP1L2|4674|nucleosome assembly protein 1-like 2	AK303676|NAP1L2|4674|nucleosome assembly protein 1-like 2	AB027013|NAP1L2|4674|nucleosome assembly protein 1-like 2	NM_021963|NAP1L2|4674|nucleosome assembly protein 1-like 2	AK316569|NAP1L2|4674|nucleosome assembly protein 1-like 2
hg18_v1_chr1_+_111634996_111635060	0.0237621	LHX3,4.p2	AK290702|CHIA|27159|chitinase, acidic	AB025008|CHIA|27159|chitinase, acidic	AB025009|CHIA|27159|chitinase, acidic	AY825504|CHIA|27159|chitinase, acidic	NM_021797|CHIA|27159|chitinase, acidic	AF290004|CHIA|27159|chitinase, acidic	AY789444|CHIA|27159|chitinase, acidic	NM_201653|CHIA|27159|chitinase, acidic
hg18_v1_chr12_+_42516118_42516228	0.0237295	LHX3,4.p2	BC042192|TMEM117|84216|transmembrane protein 117	BC060798|TMEM117|84216|transmembrane protein 117	AK057287|TMEM117|84216|transmembrane protein 117	BC030284|TMEM117|84216|transmembrane protein 117	AL136855|TMEM117|84216|transmembrane protein 117	NM_032256|TMEM117|84216|transmembrane protein 117
hg18_v1_chr7_-_112513379_112514084	0.0235464	LHX3,4.p2	AK297464|GPR85|54329|G protein-coupled receptor 85	AK312587|GPR85|54329|G protein-coupled receptor 85	NM_001146266|GPR85|54329|G protein-coupled receptor 85	AL161959|GPR85|54329|G protein-coupled receptor 85	NM_001146267|GPR85|54329|G protein-coupled receptor 85
hg18_v1_chr11_-_57947358_57947361	0.0233869	LHX3,4.p2	BC136923|OR5B2|390190|olfactory receptor, family 5, subfamily B, member 2	BC136922|OR5B2|390190|olfactory receptor, family 5, subfamily B, member 2	NM_001005566|OR5B2|390190|olfactory receptor, family 5, subfamily B, member 2
hg18_v1_chr11_-_111539881_111540056	0.0233469	LHX3,4.p2	AF380360|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)	AY044641|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)	AY266351|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)	D49950|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)	BC007007|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)	AK311301|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)	BC007461|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)	NM_001562|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)
hg18_v1_chr11_-_128567302_128567302	0.0232863	LHX3,4.p2	EF127492|ARHGAP32|9743|Rho GTPase activating protein 32	NM_001142685|ARHGAP32|9743|Rho GTPase activating protein 32
hg18_v1_chr19_-_61396232_61396232	0.023184	LHX3,4.p2	NM_001080456|ZSCAN5B|342933|zinc finger and SCAN domain containing 5B
hg18_v1_chr2_+_172530120_172530246	0.0230959	LHX3,4.p2	CR592532|HAT1|8520|histone acetyltransferase 1	BC018682|HAT1|8520|histone acetyltransferase 1
hg18_v1_chr5_+_40877053_40877346	0.0229571	LHX3,4.p2	AF356193|CARD6|84674|caspase recruitment domain family, member 6	AY196783|CARD6|84674|caspase recruitment domain family, member 6	NM_032587|CARD6|84674|caspase recruitment domain family, member 6	BC093825|CARD6|84674|caspase recruitment domain family, member 6	AK304349|CARD6|84674|caspase recruitment domain family, member 6	AB209844|CARD6|84674|caspase recruitment domain family, member 6
hg18_v1_chrX_-_71375485_71375633	0.022663	LHX3,4.p2	EU069463|ERCC6L|54821|excision repair cross-complementing rodent repair deficiency, complementation group 6-like	BC111486|ERCC6L|54821|excision repair cross-complementing rodent repair deficiency, complementation group 6-like	NM_017669|ERCC6L|54821|excision repair cross-complementing rodent repair deficiency, complementation group 6-like	AK056494|ERCC6L|54821|excision repair cross-complementing rodent repair deficiency, complementation group 6-like
hg18_v1_chr9_+_101628829_101628829	0.0225502	LHX3,4.p2	NM_173200|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3
hg18_v1_chr8_+_104900591_104900911	0.0224713	LHX3,4.p2	NM_014677|RIMS2|9699|regulating synaptic membrane exocytosis 2	AK307790|RIMS2|9699|regulating synaptic membrane exocytosis 2	AB018294|RIMS2|9699|regulating synaptic membrane exocytosis 2	BC043144|RIMS2|9699|regulating synaptic membrane exocytosis 2	AK308831|RIMS2|9699|regulating synaptic membrane exocytosis 2	BC018057|RIMS2|9699|regulating synaptic membrane exocytosis 2
hg18_v1_chr17_-_36294962_36295023	0.0219524	LHX3,4.p2	DQ890783|KRT20|54474|keratin 20	DQ896754|KRT20|54474|keratin 20	BC031559|KRT20|54474|keratin 20	AK312744|KRT20|54474|keratin 20	NM_019010|KRT20|54474|keratin 20
hg18_v1_chr1_+_50344550_50344550	0.0217564	LHX3,4.p2	AY033996|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	NM_001144775|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
hg18_v1_chr20_-_45360903_45361050	0.0217131	LHX3,4.p2	BC030721|ZMYND8|23613|zinc finger, MYND-type containing 8
hg18_v1_chr14_+_93562500_93562503	0.021568	LHX3,4.p2	AK025569|OTUB2|78990|OTU domain, ubiquitin aldehyde binding 2
hg18_v1_chr10_-_48010879_48011004	0.0214924	LHX3,4.p2	J03912|RBP3|5949|retinol binding protein 3, interstitial	BC039844|RBP3|5949|retinol binding protein 3, interstitial	M22453|RBP3|5949|retinol binding protein 3, interstitial	NM_002900|RBP3|5949|retinol binding protein 3, interstitial
hg18_v1_chr10_-_115413630_115413794	0.0213706	LHX3,4.p2	AM392642|NRAP|4892|nebulin-related anchoring protein	AM393530|NRAP|4892|nebulin-related anchoring protein	BC126407|NRAP|4892|nebulin-related anchoring protein	BC143751|NRAP|4892|nebulin-related anchoring protein	AL831980|NRAP|4892|nebulin-related anchoring protein	AL832025|NRAP|4892|nebulin-related anchoring protein	AL832330|NRAP|4892|nebulin-related anchoring protein	BX640682|NRAP|4892|nebulin-related anchoring protein	AY177620|NRAP|4892|nebulin-related anchoring protein	AY177621|NRAP|4892|nebulin-related anchoring protein	BX641052|NRAP|4892|nebulin-related anchoring protein	BC005933|NRAP|4892|nebulin-related anchoring protein	BC017866|NRAP|4892|nebulin-related anchoring protein	BC058825|NRAP|4892|nebulin-related anchoring protein	BC070130|NRAP|4892|nebulin-related anchoring protein	AK056969|NRAP|4892|nebulin-related anchoring protein	AY081943|NRAP|4892|nebulin-related anchoring protein	NM_006175|NRAP|4892|nebulin-related anchoring protein	NM_198060|NRAP|4892|nebulin-related anchoring protein
hg18_v1_chr14_+_93562436_93562476	0.0212135	LHX3,4.p2	BC009615|OTUB2|78990|OTU domain, ubiquitin aldehyde binding 2	BC068058|OTUB2|78990|OTU domain, ubiquitin aldehyde binding 2	NM_023112|OTUB2|78990|OTU domain, ubiquitin aldehyde binding 2
hg18_v1_chr12_-_52016270_52016270	0.0211127	LHX3,4.p2	AY150674|SP7|121340|Sp7 transcription factor	NM_001173467|SP7|121340|Sp7 transcription factor
hg18_v1_chr19_-_48700824_48700926	0.0210853	LHX3,4.p2	BC029299|PHLDB3|653583|pleckstrin homology-like domain, family B, member 3	NM_198850|PHLDB3|653583|pleckstrin homology-like domain, family B, member 3	BC070094|PHLDB3|653583|pleckstrin homology-like domain, family B, member 3
hg18_v1_chr11_-_5980953_5980999	0.0208313	LHX3,4.p2	NM_001005179|OR56A4|120793|olfactory receptor, family 56, subfamily A, member 4	BC136986|OR56A4|120793|olfactory receptor, family 56, subfamily A, member 4
hg18_v1_chr16_-_21571463_21571492	0.0207908	LHX3,4.p2	AJ223183|IGSF6|10261|immunoglobulin superfamily, member 6	NM_005849|IGSF6|10261|immunoglobulin superfamily, member 6
hg18_v1_chr1_+_86785346_86785513	0.0207682	LHX3,4.p2	NM_012128|CLCA4|22802|chloride channel accessory 4	AK000072|CLCA4|22802|chloride channel accessory 4	AK314430|CLCA4|22802|chloride channel accessory 4	BC113687|CLCA4|22802|chloride channel accessory 4	BC113689|CLCA4|22802|chloride channel accessory 4	AF127035|CLCA4|22802|chloride channel accessory 4	AY358470|CLCA4|22802|chloride channel accessory 4	AK307785|CLCA4|22802|chloride channel accessory 4	AK307898|CLCA4|22802|chloride channel accessory 4	AK293766|CLCA4|22802|chloride channel accessory 4
hg18_v1_chr20_-_21442663_21442663	0.0206246	LHX3,4.p2	NM_002509|NKX2-2|4821|NK2 homeobox 2
hg18_v1_chr8_-_70908130_70908178	0.020601	LHX3,4.p2	CR596526|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1	AK022760|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1	NM_001146008|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1
hg18_v1_chr6_-_66473790_66473838	0.0203839	LHX3,4.p2	FM209056|EYS|346007|eyes shut homolog (Drosophila)	BX647741|EYS|346007|eyes shut homolog (Drosophila)	BX537914|EYS|346007|eyes shut homolog (Drosophila)	FJ416331|EYS|346007|eyes shut homolog (Drosophila)	NM_001142800|EYS|346007|eyes shut homolog (Drosophila)	NM_001142801|EYS|346007|eyes shut homolog (Drosophila)
hg18_v1_chr8_-_27157157_27157233	0.0203269	LHX3,4.p2	DQ891040|STMN4|81551|stathmin-like 4	DQ894219|STMN4|81551|stathmin-like 4	AJ303455|STMN4|81551|stathmin-like 4
hg18_v1_chr4_+_25931725_25931744	0.0200565	LHX3,4.p2	AK302230|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region	CR624016|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region
hg18_v1_chr12_-_120725210_120725271	0.0200295	LHX3,4.p2	CR611200|LOC338799|338799|hypothetical LOC338799
hg18_v1_chr16_+_25135783_25135820	0.0199697	LHX3,4.p2	AB013456|AQP8|343|aquaporin 8	AF067797|AQP8|343|aquaporin 8	NM_001169|AQP8|343|aquaporin 8	AK222975|AQP8|343|aquaporin 8	AK222964|AQP8|343|aquaporin 8
hg18_v1_chr8_-_33576821_33576837	0.0199119	LHX3,4.p2	BC067804|DUSP26|78986|dual specificity phosphatase 26 (putative)
hg18_v1_chr7_+_119700924_119700957	0.0198546	LHX3,4.p2	AB028967|KCND2|3751|potassium voltage-gated channel, Shal-related subfamily, member 2	NM_012281|KCND2|3751|potassium voltage-gated channel, Shal-related subfamily, member 2
hg18_v1_chr7_+_50106227_50106227	0.0197289	LHX3,4.p2	NM_001161834|C7orf72|100130988|chromosome 7 open reading frame 72
hg18_v1_chrX_-_24600661_24600899	0.0196665	LHX3,4.p2	BC045634|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	AK296333|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	AK226121|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	NM_001163264|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta
hg18_v1_chrX_+_150316313_150316327	0.019635	LHX3,4.p2	NM_001017980|VMA21|203547|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)
hg18_v1_chr12_+_54011750_54011751	0.019615	LHX3,4.p2	NM_054104|OR6C3|254786|olfactory receptor, family 6, subfamily C, member 3
hg18_v1_chrX_-_72351381_72351384	0.0196048	LHX3,4.p2	AF136178|NAP1L2|4674|nucleosome assembly protein 1-like 2
hg18_v1_chr7_-_108311872_108311872	0.0195813	LHX3,4.p2	NM_001024607|C7orf66|154907|chromosome 7 open reading frame 66
hg18_v1_chr6_-_53121540_53121585	0.0195253	LHX3,4.p2	BC096288|GCM1|8521|glial cells missing homolog 1 (Drosophila)	BC096289|GCM1|8521|glial cells missing homolog 1 (Drosophila)	AK309881|GCM1|8521|glial cells missing homolog 1 (Drosophila)	NM_003643|GCM1|8521|glial cells missing homolog 1 (Drosophila)	D88613|GCM1|8521|glial cells missing homolog 1 (Drosophila)
hg18_v1_chr4_+_71330797_71330797	0.0194118	LHX3,4.p2	NM_001145006|MUC7|4589|mucin 7, secreted
hg18_v1_chr22_+_45109961_45109985	0.0194116	LHX3,4.p2	CR617888|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase	NM_018006|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase	AY062123|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase	DQ309998|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase	DQ309999|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase	DQ310000|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
hg18_v1_chr2_-_219791902_219791935	0.0193375	LHX3,4.p2	AK057026|ABCB6|10058|ATP-binding cassette, sub-family B (MDR/TAP), member 6	BC000559|ABCB6|10058|ATP-binding cassette, sub-family B (MDR/TAP), member 6	AJ289233|ABCB6|10058|ATP-binding cassette, sub-family B (MDR/TAP), member 6	NM_005689|ABCB6|10058|ATP-binding cassette, sub-family B (MDR/TAP), member 6	AK303230|ABCB6|10058|ATP-binding cassette, sub-family B (MDR/TAP), member 6
hg18_v1_chr11_+_5667494_5667687	0.0191014	LHX3,4.p2	NM_006074|TRIM22|10346|tripartite motif containing 22	AK308221|TRIM22|10346|tripartite motif containing 22	AK310098|TRIM22|10346|tripartite motif containing 22	BC022281|TRIM22|10346|tripartite motif containing 22	AK298715|TRIM22|10346|tripartite motif containing 22	BC035582|TRIM22|10346|tripartite motif containing 22	AK290434|TRIM22|10346|tripartite motif containing 22	X82200|TRIM22|10346|tripartite motif containing 22	AK308796|TRIM22|10346|tripartite motif containing 22	AK301192|TRIM22|10346|tripartite motif containing 22
hg18_v1_chr4_+_41309668_41309684	0.0190954	LHX3,4.p2	AK298915|LIMCH1|22998|LIM and calponin homology domains 1	AK299297|LIMCH1|22998|LIM and calponin homology domains 1	BC068200|LIMCH1|22998|LIM and calponin homology domains 1	BX537916|LIMCH1|22998|LIM and calponin homology domains 1	CR749205|LIMCH1|22998|LIM and calponin homology domains 1	NM_001112719|LIMCH1|22998|LIM and calponin homology domains 1	NM_001112720|LIMCH1|22998|LIM and calponin homology domains 1
hg18_v1_chrX_+_36163971_36163971	0.0190848	LHX3,4.p2	NM_001098843|CXorf30|645090|chromosome X open reading frame 30
hg18_v1_chr15_-_98699628_98699705	0.0189263	LHX3,4.p2	AJ315735|ADAMTS17|170691|ADAM metallopeptidase with thrombospondin type 1 motif, 17	NM_139057|ADAMTS17|170691|ADAM metallopeptidase with thrombospondin type 1 motif, 17
hg18_v1_chr5_-_35974493_35974637	0.0187517	LHX3,4.p2	NM_001042625|CAPSL|133690|calcyphosine-like	BC017586|CAPSL|133690|calcyphosine-like	NM_144647|CAPSL|133690|calcyphosine-like
hg18_v1_chr11_+_56187713_56187737	0.0182833	LHX3,4.p2	BC140745|OR5AR1|219493|olfactory receptor, family 5, subfamily AR, member 1	NM_001004730|OR5AR1|219493|olfactory receptor, family 5, subfamily AR, member 1
hg18_v1_chr3_-_191650291_191650358	0.0182587	LHX3,4.p2	BC071780|TMEM207|131920|transmembrane protein 207	AY358607|TMEM207|131920|transmembrane protein 207	NM_207316|TMEM207|131920|transmembrane protein 207
hg18_v1_chr17_-_25685175_25685202	0.0182455	LHX3,4.p2	AK290266|TMIGD1|388364|transmembrane and immunoglobulin domain containing 1	BC137201|TMIGD1|388364|transmembrane and immunoglobulin domain containing 1	BC137202|TMIGD1|388364|transmembrane and immunoglobulin domain containing 1	AY358153|TMIGD1|388364|transmembrane and immunoglobulin domain containing 1	NM_206832|TMIGD1|388364|transmembrane and immunoglobulin domain containing 1	AK172838|TMIGD1|388364|transmembrane and immunoglobulin domain containing 1
hg18_v1_chr12_-_110607889_110607978	0.0179752	LHX3,4.p2	AK308279|BRAP|8315|BRCA1 associated protein
hg18_v1_chr1_+_144374513_144374640	0.0179556	LHX3,4.p2	AL079314|RNF115|27246|ring finger protein 115
hg18_v1_chr1_+_42934910_42935048	0.0178881	LHX3,4.p2	CR606600|YBX1|4904|Y box binding protein 1	CR611343|YBX1|4904|Y box binding protein 1	BC020164|YBX1|4904|Y box binding protein 1	CR626550|YBX1|4904|Y box binding protein 1
hg18_v1_chr8_-_12220195_12220195	0.0178582	LHX3,4.p2	DQ012022|DEFB130|245940|defensin, beta 130	NM_001037804|DEFB130|245940|defensin, beta 130	NM_001195257|LOC100133267|100133267|defensin, beta 130-like
hg18_v1_chr1_+_149897334_149897386	0.0177839	LHX3,4.p2	BC107862|SNX27|81609|sorting nexin family member 27
hg18_v1_chr5_+_161207262_161207262	0.0176662	LHX3,4.p2	NM_001127643|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1
hg18_v1_chr13_-_102209422_102209422	0.0174444	LHX3,4.p2	NM_001146197|C13orf40|643677|chromosome 13 open reading frame 40
hg18_v1_chrX_-_21586337_21586368	0.0173051	LHX3,4.p2	BC109031|KLHL34|257240|kelch-like 34 (Drosophila)	AK092279|KLHL34|257240|kelch-like 34 (Drosophila)	NM_153270|KLHL34|257240|kelch-like 34 (Drosophila)
hg18_v1_chr13_-_69580459_69580625	0.0172817	LHX3,4.p2	AF252283|KLHL1|57626|kelch-like 1 (Drosophila)	AB040923|KLHL1|57626|kelch-like 1 (Drosophila)	AK291435|KLHL1|57626|kelch-like 1 (Drosophila)	NM_020866|KLHL1|57626|kelch-like 1 (Drosophila)
hg18_v1_chr11_-_5766621_5766621	0.017248	LHX3,4.p2	NM_001001913|OR52N1|79473|olfactory receptor, family 52, subfamily N, member 1
hg18_v1_chr7_+_75346201_75346354	0.0172285	LHX3,4.p2	AF226732|RHBDD2|57414|rhomboid domain containing 2	NM_001040456|RHBDD2|57414|rhomboid domain containing 2	NM_001040457|RHBDD2|57414|rhomboid domain containing 2	CR611490|RHBDD2|57414|rhomboid domain containing 2	CR590707|RHBDD2|57414|rhomboid domain containing 2	CR610119|RHBDD2|57414|rhomboid domain containing 2	CR599872|RHBDD2|57414|rhomboid domain containing 2	CR603596|RHBDD2|57414|rhomboid domain containing 2	CR624338|RHBDD2|57414|rhomboid domain containing 2	CR620747|RHBDD2|57414|rhomboid domain containing 2	BC069017|RHBDD2|57414|rhomboid domain containing 2	CR613112|RHBDD2|57414|rhomboid domain containing 2	CR602396|RHBDD2|57414|rhomboid domain containing 2	CR591432|RHBDD2|57414|rhomboid domain containing 2	CR604000|RHBDD2|57414|rhomboid domain containing 2	CR605627|RHBDD2|57414|rhomboid domain containing 2	AK026590|RHBDD2|57414|rhomboid domain containing 2	CR609399|RHBDD2|57414|rhomboid domain containing 2
hg18_v1_chr8_+_128817658_128818022	0.0172171	LHX3,4.p2	AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)	AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)	BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)	K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)	BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)	CR618399|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)	BC058901|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)
hg18_v1_chr6_+_71192862_71192894	0.0171487	LHX3,4.p2	NM_001162529|FAM135A|57579|family with sequence similarity 135, member A	AB037832|FAM135A|57579|family with sequence similarity 135, member A
hg18_v1_chr1_+_204710453_204710483	0.0171399	LHX3,4.p2	BC105923|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon	BC105924|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon	BC107591|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon	BC107812|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon	D63485|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon
hg18_v1_chr5_+_147562531_147562596	0.0170759	LHX3,4.p2	GQ504704|SPINK6|404203|serine peptidase inhibitor, Kazal type 6	NM_001195290|SPINK6|404203|serine peptidase inhibitor, Kazal type 6	NM_205841|SPINK6|404203|serine peptidase inhibitor, Kazal type 6	GQ504705|SPINK6|404203|serine peptidase inhibitor, Kazal type 6	BC032003|SPINK6|404203|serine peptidase inhibitor, Kazal type 6
hg18_v1_chrX_+_146941222_146941275	0.0170325	LHX3,4.p2	CR614668|FTH1P8|2501|ferritin, heavy polypeptide 1 pseudogene 8
hg18_v1_chrX_+_13581145_13581230	0.0169239	LHX3,4.p2	AK291271|TCEANC|170082|transcription elongation factor A (SII) N-terminal and central domain containing	AK315599|TCEANC|170082|transcription elongation factor A (SII) N-terminal and central domain containing	NM_152634|TCEANC|170082|transcription elongation factor A (SII) N-terminal and central domain containing	AK294465|TCEANC|170082|transcription elongation factor A (SII) N-terminal and central domain containing
hg18_v1_chr8_+_26491838_26491851	0.0165798	LHX3,4.p2	AK299077|DPYSL2|1808|dihydropyrimidinase-like 2
hg18_v1_chr7_-_26202626_26202771	0.0165571	LHX3,4.p2	CR613897|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1
hg18_v1_chr8_+_87180248_87180273	0.0164831	LHX3,4.p2	BC065207|ATP6V0D2|245972|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2	AK096027|ATP6V0D2|245972|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2	NM_152565|ATP6V0D2|245972|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2	AY079172|ATP6V0D2|245972|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2
hg18_v1_chr21_-_14501114_14501124	0.0164688	LHX3,4.p2	AY197607|LIPI|149998|lipase, member I	NM_198996|LIPI|149998|lipase, member I
hg18_v1_chr9_-_111230926_111231143	0.0164493	LHX3,4.p2	AK296265|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3	AK296388|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3	AK316118|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3	NM_001145371|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3	NM_001145372|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3
hg18_v1_chrX_-_15242589_15242601	0.0164205	LHX3,4.p2	NM_001012428|ASB11|140456|ankyrin repeat and SOCS box containing 11	BX537853|ASB11|140456|ankyrin repeat and SOCS box containing 11
hg18_v1_chr2_+_207115060_207115102	0.0162588	LHX3,4.p2	AK129906|ADAM23|8745|ADAM metallopeptidase domain 23
hg18_v1_chr1_+_17448179_17448193	0.016046	LHX3,4.p2	AB026831|PADI3|51702|peptidyl arginine deiminase, type III	NM_016233|PADI3|51702|peptidyl arginine deiminase, type III	BC109091|PADI3|51702|peptidyl arginine deiminase, type III	BC041592|PADI3|51702|peptidyl arginine deiminase, type III	BC109092|PADI3|51702|peptidyl arginine deiminase, type III
hg18_v1_chr7_-_133652289_133652366	0.0157832	LHX3,4.p2	AB052892|SLC35B4|84912|solute carrier family 35, member B4	NM_032826|SLC35B4|84912|solute carrier family 35, member B4
hg18_v1_chr4_+_56509793_56509903	0.0156693	LHX3,4.p2	AK023683|CEP135|9662|centrosomal protein 135kDa	NM_025009|CEP135|9662|centrosomal protein 135kDa	BC136535|CEP135|9662|centrosomal protein 135kDa	BC136536|CEP135|9662|centrosomal protein 135kDa
hg18_v1_chr2_-_216654708_216654870	0.0155588	LHX3,4.p2	EU832649|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase	EU832727|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase	AK315795|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase	BC002529|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase	AK296208|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase	AJ250303|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase	AF232009|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase	AF212234|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase	NM_018441|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase
hg18_v1_chr12_-_47031287_47031295	0.0153441	LHX3,4.p2	AK298064|ZNF641|121274|zinc finger protein 641	NM_001172682|ZNF641|121274|zinc finger protein 641
hg18_v1_chr9_+_130589330_130589353	0.0152739	LHX3,4.p2	NM_018201|TBC1D13|54662|TBC1 domain family, member 13
hg18_v1_chr2_+_233417348_233417382	0.0150254	LHX3,4.p2	BC008072|GIGYF2|26058|GRB10 interacting GYF protein 2
hg18_v1_chr17_+_58440629_58440629	0.0148335	LHX3,4.p2	NM_025185|TANC2|26115|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
hg18_v1_chr5_-_124108672_124108703	0.0148323	LHX3,4.p2	BC131507|ZNF608|57507|zinc finger protein 608	AB033107|ZNF608|57507|zinc finger protein 608	BC151226|ZNF608|57507|zinc finger protein 608	NM_020747|ZNF608|57507|zinc finger protein 608
hg18_v1_chr14_-_70071484_70071484	0.0147424	LHX3,4.p2	BC025378|ADAM20|8748|ADAM metallopeptidase domain 20	NM_003814|ADAM20|8748|ADAM metallopeptidase domain 20
hg18_v1_chr3_+_110338250_110338256	0.0146415	LHX3,4.p2	AK026416|FLJ22763|401081|hypothetical LOC401081
hg18_v1_chr12_-_23628774_23628812	0.0144396	LHX3,4.p2	NM_178010|SOX5|6660|SRY (sex determining region Y)-box 5	AK098610|SOX5|6660|SRY (sex determining region Y)-box 5	AK223536|SOX5|6660|SRY (sex determining region Y)-box 5
hg18_v1_chr7_-_102708076_102708199	0.0142345	LHX3,4.p2	AK097711|DPY19L2P2|349152|dpy-19-like 2 pseudogene 2 (C. elegans)	BC094802|DPY19L2P2|349152|dpy-19-like 2 pseudogene 2 (C. elegans)	BC023575|DPY19L2P2|349152|dpy-19-like 2 pseudogene 2 (C. elegans)
hg18_v1_chr1_+_242281199_242281214	0.0141793	LHX3,4.p2	AK291408|ZNF238|10472|zinc finger protein 238	AK293892|ZNF238|10472|zinc finger protein 238	BC036677|ZNF238|10472|zinc finger protein 238
hg18_v1_chr12_-_51047521_51047575	0.0141579	LHX3,4.p2	X99140|KRT85|3891|keratin 85	NM_002283|KRT85|3891|keratin 85
hg18_v1_chr15_-_49184764_49184764	0.0139739	LHX3,4.p2	AY517501|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3	NM_207381|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3
hg18_v1_chr8_-_30789846_30789863	0.0138379	LHX3,4.p2	AK091875|PPP2CB|5516|protein phosphatase 2, catalytic subunit, beta isozyme
hg18_v1_chr21_-_31332665_31332665	0.0138002	LHX3,4.p2	AB096964|KRTAP19-8|728299|keratin associated protein 19-8	NM_001099219|KRTAP19-8|728299|keratin associated protein 19-8
hg18_v1_chr11_-_5946299_5946299	0.0137312	LHX3,4.p2	NM_001146033|OR56A5|390084|olfactory receptor, family 56, subfamily A, member 5
hg18_v1_chr6_-_74218699_74218732	0.0134933	LHX3,4.p2	BC113606|MB21D1|115004|Mab-21 domain containing 1	BC113608|MB21D1|115004|Mab-21 domain containing 1	BC143694|MB21D1|115004|Mab-21 domain containing 1	BC012928|MB21D1|115004|Mab-21 domain containing 1	AK097148|MB21D1|115004|Mab-21 domain containing 1	BC108714|MB21D1|115004|Mab-21 domain containing 1
hg18_v1_chr2_+_95621492_95621492	0.0134617	LHX3,4.p2	BC015353|TRIM43|129868|tripartite motif containing 43	NM_138800|TRIM43|129868|tripartite motif containing 43
hg18_v1_chr12_+_56290229_56290367	0.0133351	LHX3,4.p2	AB370196|ARHGEF25|115557|Rho guanine nucleotide exchange factor (GEF) 25	NM_001111270|ARHGEF25|115557|Rho guanine nucleotide exchange factor (GEF) 25
hg18_v1_chr17_+_63766874_63766985	0.0132108	LHX3,4.p2	AY358380|ARSG|22901|arylsulfatase G	NM_014960|ARSG|22901|arylsulfatase G
hg18_v1_chr10_+_35524835_35524959	0.0128425	LHX3,4.p2	AK289379|CREM|1390|cAMP responsive element modulator	NM_182721|CREM|1390|cAMP responsive element modulator	NM_182722|CREM|1390|cAMP responsive element modulator	NM_182723|CREM|1390|cAMP responsive element modulator	NM_182724|CREM|1390|cAMP responsive element modulator	NM_182725|CREM|1390|cAMP responsive element modulator	AK291566|CREM|1390|cAMP responsive element modulator	CR614277|CREM|1390|cAMP responsive element modulator
hg18_v1_chr8_-_17624304_17624363	0.012768	LHX3,4.p2	AK294860|MTUS1|57509|microtubule associated tumor suppressor 1	NM_001166393|MTUS1|57509|microtubule associated tumor suppressor 1
hg18_v1_chr14_+_102921522_102921525	0.0127402	LHX3,4.p2	BX161395|MARK3|4140|MAP/microtubule affinity-regulating kinase 3
hg18_v1_chr15_+_62467055_62467123	0.0126061	LHX3,4.p2	NM_016213|TRIP4|9325|thyroid hormone receptor interactor 4	BC012448|TRIP4|9325|thyroid hormone receptor interactor 4	CR616759|TRIP4|9325|thyroid hormone receptor interactor 4	CR608924|TRIP4|9325|thyroid hormone receptor interactor 4	AK314319|TRIP4|9325|thyroid hormone receptor interactor 4	EU446746|TRIP4|9325|thyroid hormone receptor interactor 4
hg18_v1_chr7_+_23252911_23252912	0.0125437	LHX3,4.p2	AK297055|GPNMB|10457|glycoprotein (transmembrane) nmb	AK303071|GPNMB|10457|glycoprotein (transmembrane) nmb	AK312279|GPNMB|10457|glycoprotein (transmembrane) nmb
hg18_v1_chr2_+_135312655_135312722	0.0125176	LHX3,4.p2	AK125008|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase	NM_138326|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase	BC016018|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase	BC107420|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase	AB071418|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase
hg18_v1_chr4_-_185376012_185376107	0.0124136	LHX3,4.p2	BC035035|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6	AY358676|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6	AK057370|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6	NM_153343|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6
hg18_v1_chrX_-_102829621_102829741	0.0122582	LHX3,4.p2	CR623631|MORF4L2|9643|mortality factor 4 like 2	CR618186|MORF4L2|9643|mortality factor 4 like 2	AK302083|MORF4L2|9643|mortality factor 4 like 2	AK056012|MORF4L2|9643|mortality factor 4 like 2	CR604083|MORF4L2|9643|mortality factor 4 like 2	NM_001142419|MORF4L2|9643|mortality factor 4 like 2	NM_001142420|MORF4L2|9643|mortality factor 4 like 2	NM_001142421|MORF4L2|9643|mortality factor 4 like 2	NM_001142422|MORF4L2|9643|mortality factor 4 like 2	NM_001142427|MORF4L2|9643|mortality factor 4 like 2	NM_001142428|MORF4L2|9643|mortality factor 4 like 2	NM_001142431|MORF4L2|9643|mortality factor 4 like 2	NM_001142432|MORF4L2|9643|mortality factor 4 like 2
hg18_v1_chr3_+_99370233_99370233	0.0122563	LHX3,4.p2	NM_001005515|OR5H15|403274|olfactory receptor, family 5, subfamily H, member 15
hg18_v1_chr6_+_36670117_36670200	0.0121588	LHX3,4.p2	AK304097|SRSF3|6428|serine/arginine-rich splicing factor 3	BC000914|SRSF3|6428|serine/arginine-rich splicing factor 3	CR612662|SRSF3|6428|serine/arginine-rich splicing factor 3	CR622370|SRSF3|6428|serine/arginine-rich splicing factor 3	CR622471|SRSF3|6428|serine/arginine-rich splicing factor 3	BC069018|SRSF3|6428|serine/arginine-rich splicing factor 3	CR617139|SRSF3|6428|serine/arginine-rich splicing factor 3	AF107405|SRSF3|6428|serine/arginine-rich splicing factor 3	CR613674|SRSF3|6428|serine/arginine-rich splicing factor 3	CR624175|SRSF3|6428|serine/arginine-rich splicing factor 3	CR608185|SRSF3|6428|serine/arginine-rich splicing factor 3	CR617752|SRSF3|6428|serine/arginine-rich splicing factor 3
hg18_v1_chr11_-_4346191_4346191	0.0120253	LHX3,4.p2	BC140928|OR52B4|143496|olfactory receptor, family 52, subfamily B, member 4	NM_001005161|OR52B4|143496|olfactory receptor, family 52, subfamily B, member 4
hg18_v1_chr11_+_30209138_30209138	0.0118173	LHX3,4.p2	NM_000510|FSHB|2488|follicle stimulating hormone, beta polypeptide	NM_001018080|FSHB|2488|follicle stimulating hormone, beta polypeptide
hg18_v1_chrX_+_119621933_119622010	0.011577	LHX3,4.p2	BC095461|MCTS1|28985|malignant T cell amplified sequence 1
hg18_v1_chr11_-_7775064_7775095	0.0114521	LHX3,4.p2	AF173006|OR5P2|120065|olfactory receptor, family 5, subfamily P, member 2	NM_153444|OR5P2|120065|olfactory receptor, family 5, subfamily P, member 2	BC101710|OR5P2|120065|olfactory receptor, family 5, subfamily P, member 2	BC113557|OR5P2|120065|olfactory receptor, family 5, subfamily P, member 2
hg18_v1_chr6_-_99957253_99957290	0.0114488	LHX3,4.p2	CR623227|SFRS18|25957|splicing factor, arginine/serine-rich 18
hg18_v1_chr2_+_220071780_220072271	0.0111402	LHX3,4.p2	NM_013335|GMPPA|29926|GDP-mannose pyrophosphorylase A	CR612168|GMPPA|29926|GDP-mannose pyrophosphorylase A	AK000999|GMPPA|29926|GDP-mannose pyrophosphorylase A	NM_205847|GMPPA|29926|GDP-mannose pyrophosphorylase A	AK290671|GMPPA|29926|GDP-mannose pyrophosphorylase A	AK022578|GMPPA|29926|GDP-mannose pyrophosphorylase A	AK222951|GMPPA|29926|GDP-mannose pyrophosphorylase A	AK296193|GMPPA|29926|GDP-mannose pyrophosphorylase A	CR610071|GMPPA|29926|GDP-mannose pyrophosphorylase A	CR606483|GMPPA|29926|GDP-mannose pyrophosphorylase A	CR623459|GMPPA|29926|GDP-mannose pyrophosphorylase A	BC007456|GMPPA|29926|GDP-mannose pyrophosphorylase A	CR594561|GMPPA|29926|GDP-mannose pyrophosphorylase A	CR617537|GMPPA|29926|GDP-mannose pyrophosphorylase A	CR615722|GMPPA|29926|GDP-mannose pyrophosphorylase A	CR625729|GMPPA|29926|GDP-mannose pyrophosphorylase A	CR626618|GMPPA|29926|GDP-mannose pyrophosphorylase A
hg18_v1_chr5_-_24535386_24535386	0.011085	LHX3,4.p2	CR615281|CDH10|1008|cadherin 10, type 2 (T2-cadherin)	NM_001190450|CDH10|1008|cadherin 10, type 2 (T2-cadherin)
hg18_v1_chr18_+_53863865_53863946	0.0109447	LHX3,4.p2	AY243322|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like
hg18_v1_chr5_+_121215548_121215548	0.0108962	LHX3,4.p2	BC034419|FTMT|94033|ferritin mitochondrial	NM_177478|FTMT|94033|ferritin mitochondrial
hg18_v1_chr11_-_55684368_55684368	0.0104725	LHX3,4.p2	NM_001004058|OR8K5|219453|olfactory receptor, family 8, subfamily K, member 5
hg18_v1_chr2_+_47449790_47449903	0.0104029	LHX3,4.p2	NM_002354|EPCAM|4072|epithelial cell adhesion molecule
hg18_v1_chr1_+_78888064_78888120	0.0103921	LHX3,4.p2	NM_006417|IFI44|10561|interferon-induced protein 44	BC022870|IFI44|10561|interferon-induced protein 44	AK302527|IFI44|10561|interferon-induced protein 44	AK316476|IFI44|10561|interferon-induced protein 44	CR621445|IFI44|10561|interferon-induced protein 44
hg18_v1_chr10_-_100985548_100985621	0.0102661	LHX3,4.p2	AJ299720|HPSE2|60495|heparanase 2	AK094037|HPSE2|60495|heparanase 2	BC112356|HPSE2|60495|heparanase 2	AF282885|HPSE2|60495|heparanase 2	AF282886|HPSE2|60495|heparanase 2	AF282887|HPSE2|60495|heparanase 2	AJ299719|HPSE2|60495|heparanase 2	AK314759|HPSE2|60495|heparanase 2	NM_001166244|HPSE2|60495|heparanase 2	NM_001166245|HPSE2|60495|heparanase 2	NM_001166246|HPSE2|60495|heparanase 2	NM_021828|HPSE2|60495|heparanase 2
hg18_v1_chr2_+_151922350_151922499	0.0101055	LHX3,4.p2	NM_007115|TNFAIP6|7130|tumor necrosis factor, alpha-induced protein 6	M31165|TNFAIP6|7130|tumor necrosis factor, alpha-induced protein 6	BC030205|TNFAIP6|7130|tumor necrosis factor, alpha-induced protein 6	AJ419936|TNFAIP6|7130|tumor necrosis factor, alpha-induced protein 6	AJ421518|TNFAIP6|7130|tumor necrosis factor, alpha-induced protein 6	AF086484|TNFAIP6|7130|tumor necrosis factor, alpha-induced protein 6
hg18_v1_chr17_-_10265991_10265991	0.0100902	LHX3,4.p2	AK303395|MYH8|4626|myosin, heavy chain 8, skeletal muscle, perinatal	NM_002472|MYH8|4626|myosin, heavy chain 8, skeletal muscle, perinatal
hg18_v1_chr5_-_88215034_88215049	0.0100658	LHX3,4.p2	NM_001193350|MEF2C|4208|myocyte enhancer factor 2C	NM_002397|MEF2C|4208|myocyte enhancer factor 2C
hg18_v1_chr2_-_163403485_163403502	0.00998901	LHX3,4.p2	BC035815|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7	NM_033272|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7	NM_173162|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7
hg18_v1_chr21_-_26175068_26175121	0.00989337	LHX3,4.p2	S41243|APP|351|amyloid beta (A4) precursor protein
hg18_v1_chr1_+_209622764_209622777	0.00984435	LHX3,4.p2	AK130858|C1orf97|84791|chromosome 1 open reading frame 97
hg18_v1_chr6_+_101953581_101953671	0.00953915	LHX3,4.p2	NM_001166247|GRIK2|2898|glutamate receptor, ionotropic, kainate 2	NM_021956|GRIK2|2898|glutamate receptor, ionotropic, kainate 2	NM_175768|GRIK2|2898|glutamate receptor, ionotropic, kainate 2	AK291965|GRIK2|2898|glutamate receptor, ionotropic, kainate 2	AK289542|GRIK2|2898|glutamate receptor, ionotropic, kainate 2	BC063814|GRIK2|2898|glutamate receptor, ionotropic, kainate 2
hg18_v1_chr11_+_106967017_106967026	0.00951411	LHX3,4.p2	AK297351|ELMOD1|55531|ELMO/CED-12 domain containing 1	NM_001130037|ELMOD1|55531|ELMO/CED-12 domain containing 1	NM_018712|ELMOD1|55531|ELMO/CED-12 domain containing 1
hg18_v1_chr9_+_130589382_130589453	0.00941633	LHX3,4.p2	AK289777|TBC1D13|54662|TBC1 domain family, member 13	BC150311|TBC1D13|54662|TBC1 domain family, member 13	AK123828|TBC1D13|54662|TBC1 domain family, member 13	BC014898|TBC1D13|54662|TBC1 domain family, member 13	BC132817|TBC1D13|54662|TBC1 domain family, member 13	BC136509|TBC1D13|54662|TBC1 domain family, member 13	AK001605|TBC1D13|54662|TBC1 domain family, member 13	BC140080|TBC1D13|54662|TBC1 domain family, member 13	AB449899|TBC1D13|54662|TBC1 domain family, member 13
hg18_v1_chr22_-_15682555_15682583	0.00934803	LHX3,4.p2	BC137521|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3	BC137522|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3	BC144679|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3	AY989815|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3	AK098608|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3	AY534240|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3	BC045548|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3	NM_175878|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3
hg18_v1_chr12_-_107943227_107943261	0.0091112	LHX3,4.p2	BC033587|SVOP|55530|SV2 related protein homolog (rat)	NM_018711|SVOP|55530|SV2 related protein homolog (rat)
hg18_v1_chr2_+_113532685_113532746	0.00908118	LHX3,4.p2	BC024747|IL1F5|26525|interleukin 1 family, member 5 (delta)	NM_173170|IL1F5|26525|interleukin 1 family, member 5 (delta)	CR613851|IL1F5|26525|interleukin 1 family, member 5 (delta)	AJ242738|IL1F5|26525|interleukin 1 family, member 5 (delta)
hg18_v1_chr21_-_30893063_30893091	0.00874959	LHX3,4.p2	NM_181604|KRTAP6-2|337967|keratin associated protein 6-2	AB096952|KRTAP6-2|337967|keratin associated protein 6-2
hg18_v1_chr7_+_150013716_150013761	0.00853877	LHX3,4.p2	CR603143|GIMAP2|26157|GTPase, IMAP family member 2	NM_015660|GIMAP2|26157|GTPase, IMAP family member 2	AK074199|GIMAP2|26157|GTPase, IMAP family member 2	BC013934|GIMAP2|26157|GTPase, IMAP family member 2	AL110151|GIMAP2|26157|GTPase, IMAP family member 2	BC032345|GIMAP2|26157|GTPase, IMAP family member 2	CR616610|GIMAP2|26157|GTPase, IMAP family member 2
hg18_v1_chr4_+_89115862_89115890	0.0084854	LHX3,4.p2	CR621274|SPP1|6696|secreted phosphoprotein 1	BX648003|SPP1|6696|secreted phosphoprotein 1	J04765|SPP1|6696|secreted phosphoprotein 1	AK057738|SPP1|6696|secreted phosphoprotein 1	AK075463|SPP1|6696|secreted phosphoprotein 1	AK290090|SPP1|6696|secreted phosphoprotein 1	AK296035|SPP1|6696|secreted phosphoprotein 1	BC007016|SPP1|6696|secreted phosphoprotein 1	BC017387|SPP1|6696|secreted phosphoprotein 1	BC022844|SPP1|6696|secreted phosphoprotein 1	AK295491|SPP1|6696|secreted phosphoprotein 1
hg18_v1_chr1_+_246409910_246409910	0.00846792	LHX3,4.p2	NM_001004688|OR2M2|391194|olfactory receptor, family 2, subfamily M, member 2
hg18_v1_chr5_+_174084137_174084300	0.00843649	LHX3,4.p2	NM_002449|MSX2|4488|msh homeobox 2	D31771|MSX2|4488|msh homeobox 2	D89377|MSX2|4488|msh homeobox 2	S75361|MSX2|4488|msh homeobox 2	CR592938|MSX2|4488|msh homeobox 2	D26145|MSX2|4488|msh homeobox 2	BC015509|MSX2|4488|msh homeobox 2	X69295|MSX2|4488|msh homeobox 2	DQ891600|MSX2|4488|msh homeobox 2	DQ894795|MSX2|4488|msh homeobox 2	BT009814|MSX2|4488|msh homeobox 2
hg18_v1_chr1_+_202033273_202033273	0.00842522	LHX3,4.p2	NM_001174108|ZBED6|100381270|zinc finger, BED-type containing 6
hg18_v1_chrX_+_144710557_144710755	0.00811856	LHX3,4.p2	NM_001144006|SLITRK2|84631|SLIT and NTRK-like family, member 2	NM_001144008|SLITRK2|84631|SLIT and NTRK-like family, member 2	NM_001144009|SLITRK2|84631|SLIT and NTRK-like family, member 2	NM_001144010|SLITRK2|84631|SLIT and NTRK-like family, member 2	BC113011|SLITRK2|84631|SLIT and NTRK-like family, member 2	BC113012|SLITRK2|84631|SLIT and NTRK-like family, member 2
hg18_v1_chr2_+_61225710_61225777	0.00804062	LHX3,4.p2	NM_001143960|C2orf74|339804|chromosome 2 open reading frame 74	BC014578|C2orf74|339804|chromosome 2 open reading frame 74
hg18_v1_chr10_+_115514567_115514567	0.00787543	LHX3,4.p2	BC037870|C10orf81|79949|chromosome 10 open reading frame 81	FJ236306|C10orf81|79949|chromosome 10 open reading frame 81	NM_182601|C10orf81|79949|chromosome 10 open reading frame 81
hg18_v1_chr9_-_94338072_94338194	0.00782364	LHX3,4.p2	AB011792|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	AK303922|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	AK312820|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	AK296458|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	BX537976|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	NM_001197295|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	NM_001197296|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	NM_001393|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific
hg18_v1_chr6_+_27885692_27885830	0.00763854	LHX3,4.p2	BC007518|HIST1H3H|8357|histone cluster 1, H3h	AK311991|HIST1H3H|8357|histone cluster 1, H3h	NM_003536|HIST1H3H|8357|histone cluster 1, H3h	EU446975|HIST1H3H|8357|histone cluster 1, H3h	BC096128|HIST1H3H|8357|histone cluster 1, H3h	BC096129|HIST1H3H|8357|histone cluster 1, H3h	BC096130|HIST1H3H|8357|histone cluster 1, H3h	BC143046|HIST1H3H|8357|histone cluster 1, H3h	BC148243|HIST1H3H|8357|histone cluster 1, H3h	BC148250|HIST1H3H|8357|histone cluster 1, H3h
hg18_v1_chr19_+_52113772_52113772	0.0072895	LHX3,4.p2	AB051509|GRLF1|2909|glucocorticoid receptor DNA binding factor 1	AF159851|GRLF1|2909|glucocorticoid receptor DNA binding factor 1	BC131565|GRLF1|2909|glucocorticoid receptor DNA binding factor 1	BC150257|GRLF1|2909|glucocorticoid receptor DNA binding factor 1	NM_004491|GRLF1|2909|glucocorticoid receptor DNA binding factor 1
hg18_v1_chr20_-_55368284_55368284	0.00724864	LHX3,4.p2	NM_001190472|MTRNR2L3|100462983|MT-RNR2-like 3
hg18_v1_chr11_-_26700121_26700149	0.00722045	LHX3,4.p2	BC049207|SLC5A12|159963|solute carrier family 5 (sodium/glucose cotransporter), member 12	NM_178498|SLC5A12|159963|solute carrier family 5 (sodium/glucose cotransporter), member 12
hg18_v1_chr1_-_20014180_20014357	0.00717412	LHX3,4.p2	CR457228|RNF186|54546|ring finger protein 186	BC051880|RNF186|54546|ring finger protein 186	BC030960|RNF186|54546|ring finger protein 186	AK000232|RNF186|54546|ring finger protein 186	AK222991|RNF186|54546|ring finger protein 186	NM_019062|RNF186|54546|ring finger protein 186
hg18_v1_chr4_+_123380569_123380579	0.00716161	LHX3,4.p2	CR936613|KIAA1109|84162|KIAA1109
hg18_v1_chr7_-_19151509_19151568	0.00714729	LHX3,4.p2	BC069147|FERD3L|222894|Fer3-like (Drosophila)	BC101135|FERD3L|222894|Fer3-like (Drosophila)	BC101136|FERD3L|222894|Fer3-like (Drosophila)	BC101137|FERD3L|222894|Fer3-like (Drosophila)	BC101138|FERD3L|222894|Fer3-like (Drosophila)	AF517122|FERD3L|222894|Fer3-like (Drosophila)	NM_152898|FERD3L|222894|Fer3-like (Drosophila)
hg18_v1_chr14_+_49304032_49304075	0.00702657	LHX3,4.p2	AK056298|KLHDC2|23588|kelch domain containing 2
hg18_v1_chr6_-_44341222_44341262	0.00692898	LHX3,4.p2	CR616372|NFKBIE|4794|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon	CR599256|NFKBIE|4794|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon	BC011676|NFKBIE|4794|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon	BC063609|NFKBIE|4794|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon	AK301360|NFKBIE|4794|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon
hg18_v1_chr5_-_95323180_95323329	0.00691188	LHX3,4.p2	DQ891536|ELL2|22936|elongation factor, RNA polymerase II, 2	DQ894725|ELL2|22936|elongation factor, RNA polymerase II, 2	AK297956|ELL2|22936|elongation factor, RNA polymerase II, 2	AK296870|ELL2|22936|elongation factor, RNA polymerase II, 2
hg18_v1_chr2_-_101291483_101291666	0.00671561	LHX3,4.p2	AM392566|RNF149|284996|ring finger protein 149	BC019355|RNF149|284996|ring finger protein 149	BC032328|RNF149|284996|ring finger protein 149	CR621578|RNF149|284996|ring finger protein 149	AK074985|RNF149|284996|ring finger protein 149	AK075141|RNF149|284996|ring finger protein 149	AY450390|RNF149|284996|ring finger protein 149	BC045743|RNF149|284996|ring finger protein 149	CR591001|RNF149|284996|ring finger protein 149	AK129799|RNF149|284996|ring finger protein 149	NM_173647|RNF149|284996|ring finger protein 149
hg18_v1_chr2_-_69033515_69033605	0.00668787	LHX3,4.p2	BC110809|GKN2|200504|gastrokine 2	AJ966788|GKN2|200504|gastrokine 2	AY943908|GKN2|200504|gastrokine 2	AF494509|GKN2|200504|gastrokine 2	AY358664|GKN2|200504|gastrokine 2	NM_182536|GKN2|200504|gastrokine 2
hg18_v1_chr20_-_19984685_19984689	0.00655037	LHX3,4.p2	BC144222|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)	AF255443|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)	AF318303|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)	AF318304|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)	AF318305|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)	NM_016652|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)
hg18_v1_chrX_+_100241453_100241453	0.00641362	LHX3,4.p2	NM_006733|CENPI|2491|centromere protein I	X97249|CENPI|2491|centromere protein I
hg18_v1_chr20_+_56848127_56848144	0.00604295	LHX3,4.p2	AK314549|GNAS|2778|GNAS complex locus
hg18_v1_chr13_+_31211678_31211749	0.00601126	LHX3,4.p2	NM_001166058|RXFP2|122042|relaxin/insulin-like family peptide receptor 2	NM_130806|RXFP2|122042|relaxin/insulin-like family peptide receptor 2	AF453828|RXFP2|122042|relaxin/insulin-like family peptide receptor 2	AY899851|RXFP2|122042|relaxin/insulin-like family peptide receptor 2
hg18_v1_chr5_+_147695314_147695343	0.00577764	LHX3,4.p2	AY396740|SPINK9|643394|serine peptidase inhibitor, Kazal type 9	NM_001040433|SPINK9|643394|serine peptidase inhibitor, Kazal type 9	BC137530|SPINK9|643394|serine peptidase inhibitor, Kazal type 9	BC137531|SPINK9|643394|serine peptidase inhibitor, Kazal type 9
hg18_v1_chr1_-_201177899_201177907	0.00569433	LHX3,4.p2	CR610443|ADIPOR1|51094|adiponectin receptor 1
hg18_v1_chr10_-_120928327_120928347	0.00566477	LHX3,4.p2	BC021691|PRDX3|10935|peroxiredoxin 3	NM_006793|PRDX3|10935|peroxiredoxin 3	NM_014098|PRDX3|10935|peroxiredoxin 3
hg18_v1_chr9_+_6710862_6710862	0.00564313	LHX3,4.p2	AK310439|KDM4C|23081|lysine (K)-specific demethylase 4C	NM_001146696|KDM4C|23081|lysine (K)-specific demethylase 4C
hg18_v1_chr10_+_71833920_71833937	0.00555579	LHX3,4.p2	BC050633|EIF4EBP2|1979|eukaryotic translation initiation factor 4E binding protein 2
hg18_v1_chr11_-_83661878_83661970	0.00548735	LHX3,4.p2	AK294375|DLG2|1740|discs, large homolog 2 (Drosophila)	AK126776|DLG2|1740|discs, large homolog 2 (Drosophila)	AK295624|DLG2|1740|discs, large homolog 2 (Drosophila)	NM_001142700|DLG2|1740|discs, large homolog 2 (Drosophila)
hg18_v1_chr9_-_122382079_122382270	0.00539884	LHX3,4.p2	BC136275|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	BC143732|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	BC143734|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	BC143753|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	BC143755|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	BC143760|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	BC143762|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	BC143764|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	AF448860|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	AB046853|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	BC146782|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	BC019577|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	BX537421|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	AL833481|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	BX537759|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	AK122913|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	BX537708|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	NM_001011649|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	NM_018249|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2
hg18_v1_chr17_+_54997667_54997871	0.00535243	LHX3,4.p2	AF461690|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	NM_001166301|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	NM_024612|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	BC024187|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	AK299151|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	AK095681|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	AF260270|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	AK226048|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	DQ890909|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	DQ894060|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40
hg18_v1_chr4_-_100431093_100431207	0.00535186	LHX3,4.p2	BT019812|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide	M12271|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide	BC074738|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide	BC117442|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide	BC126306|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide	AK290558|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide	M12963|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide	AK309597|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide	NM_000667|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide
hg18_v1_chr15_+_92700167_92700459	0.00530189	LHX3,4.p2	NM_001159644|MCTP2|55784|multiple C2 domains, transmembrane 2	BC025708|MCTP2|55784|multiple C2 domains, transmembrane 2	BC111024|MCTP2|55784|multiple C2 domains, transmembrane 2	AK002037|MCTP2|55784|multiple C2 domains, transmembrane 2
hg18_v1_chr12_-_86947276_86947306	0.00520239	LHX3,4.p2	AL833338|C12orf50|160419|chromosome 12 open reading frame 50	BC062424|C12orf50|160419|chromosome 12 open reading frame 50	AK093140|C12orf50|160419|chromosome 12 open reading frame 50	NM_152589|C12orf50|160419|chromosome 12 open reading frame 50
hg18_v1_chr16_+_88512769_88512788	0.00484897	LHX3,4.p2	AK225902|MC1R|4157|melanocortin 1 receptor (alpha melanocyte stimulating hormone receptor)	AK054666|MC1R|4157|melanocortin 1 receptor (alpha melanocyte stimulating hormone receptor)	BC007856|MC1R|4157|melanocortin 1 receptor (alpha melanocyte stimulating hormone receptor)
hg18_v1_chr5_+_140227951_140228014	0.00476666	LHX3,4.p2	BC136706|PCDHA11|56138|protocadherin alpha 11	AJ007609|PCDHA11|56138|protocadherin alpha 11	NM_018902|PCDHA11|56138|protocadherin alpha 11	NM_031861|PCDHA11|56138|protocadherin alpha 11
hg18_v1_chr1_-_143075560_143075602	0.0047136	LHX3,4.p2	BC130376|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G	BC130378|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G	AB084917|PPIAL4A|164022|peptidylprolyl isomerase A (cyclophilin A)-like 4A	NM_001135789|PPIAL4C|653598|peptidylprolyl isomerase A (cyclophilin A)-like 4C	NM_001143883|PPIAL4B|653505|peptidylprolyl isomerase A (cyclophilin A)-like 4B	NM_178230|PPIAL4A|164022|peptidylprolyl isomerase A (cyclophilin A)-like 4A
hg18_v1_chr2_-_178681311_178681311	0.00461048	LHX3,4.p2	AB038041|PDE11A|50940|phosphodiesterase 11A	NM_001077197|PDE11A|50940|phosphodiesterase 11A
hg18_v1_chrX_+_48978923_48979039	0.00455408	LHX3,4.p2	BC000972|CCDC22|28952|coiled-coil domain containing 22	AK316375|CCDC22|28952|coiled-coil domain containing 22	AJ005890|CCDC22|28952|coiled-coil domain containing 22	DQ894170|CCDC22|28952|coiled-coil domain containing 22	EU176573|CCDC22|28952|coiled-coil domain containing 22	BC011675|CCDC22|28952|coiled-coil domain containing 22
hg18_v1_chr22_+_40027398_40027523	0.00449106	LHX3,4.p2	BC152558|ZC3H7B|23264|zinc finger CCCH-type containing 7B	AK225891|ZC3H7B|23264|zinc finger CCCH-type containing 7B	AK315009|ZC3H7B|23264|zinc finger CCCH-type containing 7B	NM_017590|ZC3H7B|23264|zinc finger CCCH-type containing 7B	BC098378|ZC3H7B|23264|zinc finger CCCH-type containing 7B
hg18_v1_chr3_-_123716454_123716470	0.00444943	LHX3,4.p2	BC002374|KPNA1|3836|karyopherin alpha 1 (importin alpha 5)	BC003009|KPNA1|3836|karyopherin alpha 1 (importin alpha 5)	AK312713|KPNA1|3836|karyopherin alpha 1 (importin alpha 5)
hg18_v1_chr11_-_56267862_56267862	0.00436979	LHX3,4.p2	NM_001005284|OR9G4|283189|olfactory receptor, family 9, subfamily G, member 4
hg18_v1_chr1_+_119759076_119759076	0.00422685	LHX3,4.p2	NM_001166120|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2
hg18_v1_chr4_+_186587537_186587538	0.00420467	LHX3,4.p2	BC127739|C4orf47|441054|chromosome 4 open reading frame 47	BC141968|C4orf47|441054|chromosome 4 open reading frame 47	BC150574|C4orf47|441054|chromosome 4 open reading frame 47	NM_001114357|C4orf47|441054|chromosome 4 open reading frame 47
hg18_v1_chr3_-_47492421_47492451	0.00409632	LHX3,4.p2	AK291484|SCAP|22937|SREBF chaperone	D83782|SCAP|22937|SREBF chaperone	NM_012235|SCAP|22937|SREBF chaperone
hg18_v1_chr3_+_129927714_129927715	0.00394455	LHX3,4.p2	AK094449|RAB7A|7879|RAB7A, member RAS oncogene family
hg18_v1_chr8_-_86441115_86441194	0.0038309	LHX3,4.p2	DQ890930|CA1|759|carbonic anhydrase I	DQ894091|CA1|759|carbonic anhydrase I	X05014|CA1|759|carbonic anhydrase I	NM_001164830|CA1|759|carbonic anhydrase I
hg18_v1_chr5_-_100266769_100266886	0.00381478	LHX3,4.p2	L41680|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	BC027866|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	AK292872|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	BC053657|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	NM_175052|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	NM_005668|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4
hg18_v1_chr6_+_101953389_101953407	0.00379704	LHX3,4.p2	BC037954|GRIK2|2898|glutamate receptor, ionotropic, kainate 2
hg18_v1_chr9_-_34610489_34610497	0.00375747	LHX3,4.p2	NM_007234|DCTN3|11258|dynactin 3 (p22)	NM_024348|DCTN3|11258|dynactin 3 (p22)
hg18_v1_chr19_+_53450743_53450779	0.00374585	LHX3,4.p2	
hg18_v1_chr21_+_30895276_30895310	0.00369175	LHX3,4.p2	AB096953|KRTAP22-1|337979|keratin associated protein 22-1	BC101682|KRTAP22-1|337979|keratin associated protein 22-1	BC101686|KRTAP22-1|337979|keratin associated protein 22-1	NM_181620|KRTAP22-1|337979|keratin associated protein 22-1
hg18_v1_chr6_+_114285209_114285646	0.00356077	LHX3,4.p2	AK074526|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	NM_002356|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	BC013004|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	BC028284|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	BC068059|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	D10522|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	M68956|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	BC089040|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	EU832331|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	EU832416|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate
hg18_v1_chr8_-_146049660_146049751	0.00349725	LHX3,4.p2	NM_001081003|COMMD5|28991|COMM domain containing 5
hg18_v1_chr11_-_27679175_27679175	0.00346748	LHX3,4.p2	EF689011|BDNF|627|brain-derived neurotrophic factor	EF689012|BDNF|627|brain-derived neurotrophic factor	EF689019|BDNF|627|brain-derived neurotrophic factor	EF689020|BDNF|627|brain-derived neurotrophic factor	NM_001143808|BDNF|627|brain-derived neurotrophic factor	NM_001143809|BDNF|627|brain-derived neurotrophic factor	NM_001143810|BDNF|627|brain-derived neurotrophic factor	NM_001143811|BDNF|627|brain-derived neurotrophic factor
hg18_v1_chr9_-_34610483_34610488	0.00339471	LHX3,4.p2	BC107697|DCTN3|11258|dynactin 3 (p22)	AK314730|DCTN3|11258|dynactin 3 (p22)
hg18_v1_chr3_+_129927716_129927720	0.0033703	LHX3,4.p2	AK290721|RAB7A|7879|RAB7A, member RAS oncogene family
hg18_v1_chr22_+_29696662_29696813	0.0032809	LHX3,4.p2	
hg18_v1_chr1_-_115070413_115070531	0.00326974	LHX3,4.p2	BC021692|CSDE1|7812|cold shock domain containing E1, RNA-binding	CR594529|CSDE1|7812|cold shock domain containing E1, RNA-binding
hg18_v1_chr2_+_234292162_234292213	0.00323189	LHX3,4.p2	AK313623|UGT1A4|54657|UDP glucuronosyltransferase 1 family, polypeptide A4	M57951|UGT1A4|54657|UDP glucuronosyltransferase 1 family, polypeptide A4	NM_007120|UGT1A4|54657|UDP glucuronosyltransferase 1 family, polypeptide A4	BC139784|UGT1A4|54657|UDP glucuronosyltransferase 1 family, polypeptide A4	AY435139|UGT1A4|54657|UDP glucuronosyltransferase 1 family, polypeptide A4	BC121036|UGT1A4|54657|UDP glucuronosyltransferase 1 family, polypeptide A4	BC131623|UGT1A4|54657|UDP glucuronosyltransferase 1 family, polypeptide A4
hg18_v1_chr6_+_34312979_34312998	0.00292189	LHX3,4.p2	CR613337|HMGA1|3159|high mobility group AT-hook 1	CR600575|HMGA1|3159|high mobility group AT-hook 1	CR620670|HMGA1|3159|high mobility group AT-hook 1	CR598411|HMGA1|3159|high mobility group AT-hook 1
hg18_v1_chr20_-_29464301_29464301	0.00279773	LHX3,4.p2	NM_001171832|DEFB121|245934|defensin, beta 121
hg18_v1_chr2_-_178495768_178495809	0.00276727	LHX3,4.p2	AF281865|PDE11A|50940|phosphodiesterase 11A	NM_001077358|PDE11A|50940|phosphodiesterase 11A
hg18_v1_chr6_-_161007396_161007396	0.00274314	LHX3,4.p2	NM_005577|LPA|4018|lipoprotein, Lp(a)
hg18_v1_chr9_+_99807257_99807275	0.00270857	LHX3,4.p2	
hg18_v1_chr10_-_27569269_27569831	0.00263156	LHX3,4.p2	AK295031|ACBD5|91452|acyl-CoA binding domain containing 5	AK304842|ACBD5|91452|acyl-CoA binding domain containing 5	BC025309|ACBD5|91452|acyl-CoA binding domain containing 5	BC030555|ACBD5|91452|acyl-CoA binding domain containing 5	BC011364|ACBD5|91452|acyl-CoA binding domain containing 5	AK294510|ACBD5|91452|acyl-CoA binding domain containing 5	NM_145698|ACBD5|91452|acyl-CoA binding domain containing 5
hg18_v1_chrX_+_35974973_35974973	0.00261338	LHX3,4.p2	AK093920|CXorf59|286464|chromosome X open reading frame 59	NM_173695|CXorf59|286464|chromosome X open reading frame 59
hg18_v1_chr1_+_190394214_190394390	0.00259866	LHX3,4.p2	NM_130782|RGS18|64407|regulator of G-protein signaling 18	AK292015|RGS18|64407|regulator of G-protein signaling 18	BC020632|RGS18|64407|regulator of G-protein signaling 18	AK057114|RGS18|64407|regulator of G-protein signaling 18	AK315377|RGS18|64407|regulator of G-protein signaling 18	AF268036|RGS18|64407|regulator of G-protein signaling 18	AF076642|RGS18|64407|regulator of G-protein signaling 18	CR602825|RGS18|64407|regulator of G-protein signaling 18	DQ891393|RGS18|64407|regulator of G-protein signaling 18	DQ894569|RGS18|64407|regulator of G-protein signaling 18
hg18_v1_chr1_+_147819626_147819668	0.00252179	LHX3,4.p2	AB084917|PPIAL4A|164022|peptidylprolyl isomerase A (cyclophilin A)-like 4A	NM_001135789|PPIAL4C|653598|peptidylprolyl isomerase A (cyclophilin A)-like 4C	NM_178230|PPIAL4A|164022|peptidylprolyl isomerase A (cyclophilin A)-like 4A	BC130376|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G	BC130378|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G
hg18_v1_chr17_+_49255237_49255392	0.00237421	LHX3,4.p2	NM_032559|KIF2B|84643|kinesin family member 2B	AK057272|KIF2B|84643|kinesin family member 2B	AF333335|KIF2B|84643|kinesin family member 2B	BC033802|KIF2B|84643|kinesin family member 2B	AK302262|KIF2B|84643|kinesin family member 2B
hg18_v1_chr20_+_3724905_3725106	0.0023724	LHX3,4.p2	S78187|CDC25B|994|cell division cycle 25 homolog B (S. pombe)	Z68092|CDC25B|994|cell division cycle 25 homolog B (S. pombe)	BC006395|CDC25B|994|cell division cycle 25 homolog B (S. pombe)	M81934|CDC25B|994|cell division cycle 25 homolog B (S. pombe)
hg18_v1_chr10_+_71833905_71833913	0.00212046	LHX3,4.p2	AK313724|EIF4EBP2|1979|eukaryotic translation initiation factor 4E binding protein 2
hg18_v1_chr1_+_204710409_204710450	0.00184416	LHX3,4.p2	AK093798|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon	AK310737|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon	AY660028|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon
hg18_v1_chr16_+_6763810_6763810	0.00174146	LHX3,4.p2	AK001027|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1	NM_001142334|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1
hg18_v1_chr11_-_102100833_102100894	0.00170444	LHX3,4.p2	BC074988|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)	BC074989|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)	BC144094|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)	J05556|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)	AK292659|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)	AK303388|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)	AK303511|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)	AK313374|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)	NM_002424|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)
hg18_v1_chr7_-_98935845_98935857	0.00154028	LHX3,4.p2	AK022360|ZNF394|84124|zinc finger protein 394
hg18_v1_chr1_+_148532885_148532964	0.00148423	LHX3,4.p2	NM_018997|MRPS21|54460|mitochondrial ribosomal protein S21	NM_031901|MRPS21|54460|mitochondrial ribosomal protein S21	AK289467|MRPS21|54460|mitochondrial ribosomal protein S21	CR610321|MRPS21|54460|mitochondrial ribosomal protein S21	AB049955|MRPS21|54460|mitochondrial ribosomal protein S21	BC004566|MRPS21|54460|mitochondrial ribosomal protein S21	BC006554|MRPS21|54460|mitochondrial ribosomal protein S21	U79258|MRPS21|54460|mitochondrial ribosomal protein S21
hg18_v1_chr3_+_101694098_101694188	0.00143579	LHX3,4.p2	AK000996|TMEM45A|55076|transmembrane protein 45A	AY450392|TMEM45A|55076|transmembrane protein 45A	NM_018004|TMEM45A|55076|transmembrane protein 45A
hg18_v1_chr4_-_69116839_69116839	0.00139898	LHX3,4.p2	NM_001077|UGT2B17|7367|UDP glucuronosyltransferase 2 family, polypeptide B17	U59209|UGT2B17|7367|UDP glucuronosyltransferase 2 family, polypeptide B17
hg18_v1_chr14_+_19285426_19285426	0.00134353	LHX3,4.p2	NM_172194|OR4Q3|441669|olfactory receptor, family 4, subfamily Q, member 3
hg18_v1_chr11_+_48194937_48194937	0.00126992	LHX3,4.p2	NM_001005470|OR4B1|119765|olfactory receptor, family 4, subfamily B, member 1
hg18_v1_chr12_-_9913199_9913251	0.0011709	LHX3,4.p2	X96719|CLEC2B|9976|C-type lectin domain family 2, member B	AY142147|CLEC2B|9976|C-type lectin domain family 2, member B	AB015628|CLEC2B|9976|C-type lectin domain family 2, member B	BC005254|CLEC2B|9976|C-type lectin domain family 2, member B	AK311232|CLEC2B|9976|C-type lectin domain family 2, member B	AK313916|CLEC2B|9976|C-type lectin domain family 2, member B	AK307334|CLEC2B|9976|C-type lectin domain family 2, member B
hg18_v1_chr1_+_92405196_92405196	0.00113909	LHX3,4.p2	NM_015237|KIAA1107|23285|KIAA1107
hg18_v1_chr21_+_44566063_44566144	0.00106434	LHX3,4.p2	CR591167|PFKL|5211|phosphofructokinase, liver
hg18_v1_chr12_-_50026689_50026729	0.000937505	LHX3,4.p2	BC075091|CELA1|1990|chymotrypsin-like elastase family, member 1	AF120493|CELA1|1990|chymotrypsin-like elastase family, member 1	BC069454|CELA1|1990|chymotrypsin-like elastase family, member 1	NM_001971|CELA1|1990|chymotrypsin-like elastase family, member 1
hg18_v1_chr18_+_20294590_20294690	0.000890912	LHX3,4.p2	AF312230|HRH4|59340|histamine receptor H4	BC069136|HRH4|59340|histamine receptor H4	NM_001143828|HRH4|59340|histamine receptor H4	NM_001160166|HRH4|59340|histamine receptor H4	NM_021624|HRH4|59340|histamine receptor H4	AB045370|HRH4|59340|histamine receptor H4	BC112348|HRH4|59340|histamine receptor H4	AB044934|HRH4|59340|histamine receptor H4	AF307973|HRH4|59340|histamine receptor H4	AF325356|HRH4|59340|histamine receptor H4	AF329449|HRH4|59340|histamine receptor H4	AJ298292|HRH4|59340|histamine receptor H4	AY008280|HRH4|59340|histamine receptor H4	AY136745|HRH4|59340|histamine receptor H4	DQ835186|HRH4|59340|histamine receptor H4	DQ835187|HRH4|59340|histamine receptor H4
hg18_v1_chr20_+_1132097_1132167	0.000885698	LHX3,4.p2	AK092524|C20orf202|400831|chromosome 20 open reading frame 202	NM_001009612|C20orf202|400831|chromosome 20 open reading frame 202	BC127730|C20orf202|400831|chromosome 20 open reading frame 202	BC127731|C20orf202|400831|chromosome 20 open reading frame 202	BC141955|C20orf202|400831|chromosome 20 open reading frame 202	BC141956|C20orf202|400831|chromosome 20 open reading frame 202	BC150532|C20orf202|400831|chromosome 20 open reading frame 202
hg18_v1_chr2_-_169596078_169596078	0.000791145	LHX3,4.p2	AF091582|ABCB11|8647|ATP-binding cassette, sub-family B (MDR/TAP), member 11	NM_003742|ABCB11|8647|ATP-binding cassette, sub-family B (MDR/TAP), member 11
hg18_v1_chrX_+_119621771_119621862	0.000724915	LHX3,4.p2	NM_014060|MCTS1|28985|malignant T cell amplified sequence 1	AK311993|MCTS1|28985|malignant T cell amplified sequence 1	AB034206|MCTS1|28985|malignant T cell amplified sequence 1
hg18_v1_chr1_+_169484256_169484315	0.000600407	LHX3,4.p2	AK290113|FMO1|2326|flavin containing monooxygenase 1	AK315100|FMO1|2326|flavin containing monooxygenase 1	M64082|FMO1|2326|flavin containing monooxygenase 1	NM_002021|FMO1|2326|flavin containing monooxygenase 1	AK296198|FMO1|2326|flavin containing monooxygenase 1
hg18_v1_chr8_-_11966664_11966664	0.000430285	LHX3,4.p2	DQ012022|DEFB130|245940|defensin, beta 130	NM_001037804|DEFB130|245940|defensin, beta 130	NM_001195257|LOC100133267|100133267|defensin, beta 130-like
hg18_v1_chr1_+_201862552_201862612	0.000339026	LHX3,4.p2	CR936708|ATP2B4|493|ATPase, Ca++ transporting, plasma membrane 4	CR749393|ATP2B4|493|ATPase, Ca++ transporting, plasma membrane 4
hg18_v1_chr10_+_91142301_91142385	0.000323548	LHX3,4.p2	NM_001548|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1	BC007091|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1	AK314588|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1	CR623965|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1	CR593386|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1	CR601585|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1	AK308688|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1	CR591778|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1	CR621649|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1	CR617896|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1	X03557|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1
hg18_v1_chrX_+_37777730_37777730	3.49807e-05	LHX3,4.p2	NM_001163334|SYTL5|94122|synaptotagmin-like 5
hg18_v1_chr12_+_15017222_15017244	3.30093e-05	LHX3,4.p2	NM_006205|PDE6H|5149|phosphodiesterase 6H, cGMP-specific, cone, gamma	D45399|PDE6H|5149|phosphodiesterase 6H, cGMP-specific, cone, gamma
