hg18_v1_chr10_+_11246934_11247016	1.83142	SOX2.p2	AK299983|CELF2|10659|CUGBP, Elav-like family member 2	NM_001025076|CELF2|10659|CUGBP, Elav-like family member 2	NM_001083591|CELF2|10659|CUGBP, Elav-like family member 2
hg18_v1_chr7_+_106292975_106293045	1.82708	SOX2.p2	AK313753|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide	BX648341|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide	BC035683|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide
hg18_v1_chr7_+_106292932_106292967	1.74298	SOX2.p2	AK292684|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide
hg18_v1_chr13_-_98757634_98757749	1.41622	SOX2.p2	CR597919|GPR183|1880|G protein-coupled receptor 183	CR609579|GPR183|1880|G protein-coupled receptor 183	AK223390|GPR183|1880|G protein-coupled receptor 183	BC020752|GPR183|1880|G protein-coupled receptor 183	CR614065|GPR183|1880|G protein-coupled receptor 183	AK292091|GPR183|1880|G protein-coupled receptor 183	AK313443|GPR183|1880|G protein-coupled receptor 183	NM_004951|GPR183|1880|G protein-coupled receptor 183
hg18_v1_chr3_+_39484073_39484198	1.37548	SOX2.p2	NM_182935|MOBP|4336|myelin-associated oligodendrocyte basic protein	BC075796|MOBP|4336|myelin-associated oligodendrocyte basic protein	AK127034|MOBP|4336|myelin-associated oligodendrocyte basic protein	AK290187|MOBP|4336|myelin-associated oligodendrocyte basic protein	BC022471|MOBP|4336|myelin-associated oligodendrocyte basic protein	CR610306|MOBP|4336|myelin-associated oligodendrocyte basic protein
hg18_v1_chr10_+_11247059_11247146	1.33034	SOX2.p2	AK297313|CELF2|10659|CUGBP, Elav-like family member 2	AK299992|CELF2|10659|CUGBP, Elav-like family member 2	AF036956|CELF2|10659|CUGBP, Elav-like family member 2	AK293164|CELF2|10659|CUGBP, Elav-like family member 2	AF432906|CELF2|10659|CUGBP, Elav-like family member 2
hg18_v1_chr17_-_46479127_46479269	1.26539	SOX2.p2	BC007524|SPAG9|9043|sperm associated antigen 9	BC059946|SPAG9|9043|sperm associated antigen 9	AK299553|SPAG9|9043|sperm associated antigen 9	AK307793|SPAG9|9043|sperm associated antigen 9	AK295098|SPAG9|9043|sperm associated antigen 9	AK309214|SPAG9|9043|sperm associated antigen 9	AK024068|SPAG9|9043|sperm associated antigen 9
hg18_v1_chr17_-_1195096_1195116	1.24877	SOX2.p2	L13388|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)
hg18_v1_chrX_-_11194015_11194044	1.1724	SOX2.p2	AF177663|ARHGAP6|395|Rho GTPase activating protein 6	NM_013423|ARHGAP6|395|Rho GTPase activating protein 6	AK297713|ARHGAP6|395|Rho GTPase activating protein 6
hg18_v1_chr7_+_106293112_106293218	1.12919	SOX2.p2	NM_002649|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide	X83368|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide
hg18_v1_chr1_+_22107137_22107137	1.12634	SOX2.p2	D28406|RPL21|6144|ribosomal protein L21
hg18_v1_chr3_-_150533948_150534237	1.11598	SOX2.p2	NM_001184723|TM4SF18|116441|transmembrane 4 L six family member 18	AK313400|TM4SF18|116441|transmembrane 4 L six family member 18	BC014339|TM4SF18|116441|transmembrane 4 L six family member 18	AL833134|TM4SF18|116441|transmembrane 4 L six family member 18	NM_138786|TM4SF18|116441|transmembrane 4 L six family member 18
hg18_v1_chr1_+_242283129_242283204	1.07526	SOX2.p2	BC078175|ZNF238|10472|zinc finger protein 238	AJ001388|ZNF238|10472|zinc finger protein 238	NM_006352|ZNF238|10472|zinc finger protein 238
hg18_v1_chr5_-_71838875_71839004	1.05187	SOX2.p2	BC121053|ZNF366|167465|zinc finger protein 366	BC121054|ZNF366|167465|zinc finger protein 366	BX647592|ZNF366|167465|zinc finger protein 366	BC029955|ZNF366|167465|zinc finger protein 366	AK097115|ZNF366|167465|zinc finger protein 366	NM_152625|ZNF366|167465|zinc finger protein 366
hg18_v1_chr10_+_70517823_70517861	1.04528	SOX2.p2	NM_002727|SRGN|5552|serglycin	CR626092|SRGN|5552|serglycin	CR626802|SRGN|5552|serglycin
hg18_v1_chr4_+_71806538_71806631	1.04039	SOX2.p2	NM_001037442|RUFY3|22902|RUN and FYVE domain containing 3	NM_014961|RUFY3|22902|RUN and FYVE domain containing 3	BC051716|RUFY3|22902|RUN and FYVE domain containing 3	CR598922|RUFY3|22902|RUN and FYVE domain containing 3	BC053837|RUFY3|22902|RUN and FYVE domain containing 3	BC098433|RUFY3|22902|RUN and FYVE domain containing 3	AB020678|RUFY3|22902|RUN and FYVE domain containing 3	BC071988|RUFY3|22902|RUN and FYVE domain containing 3
hg18_v1_chr10_+_70517863_70517960	1.02816	SOX2.p2	D28395|SRGN|5552|serglycin	BC022313|SRGN|5552|serglycin	AK311873|SRGN|5552|serglycin	BC015516|SRGN|5552|serglycin	J03223|SRGN|5552|serglycin	CR603277|SRGN|5552|serglycin	CR612769|SRGN|5552|serglycin	CR609954|SRGN|5552|serglycin	CR610350|SRGN|5552|serglycin	X17042|SRGN|5552|serglycin	CR616782|SRGN|5552|serglycin
hg18_v1_chr18_+_13601664_13601664	1.02736	SOX2.p2	NM_001003674|C18orf1|753|chromosome 18 open reading frame 1	NM_001003675|C18orf1|753|chromosome 18 open reading frame 1
hg18_v1_chr4_+_86918882_86918963	1.01629	SOX2.p2	BC098580|ARHGAP24|83478|Rho GTPase activating protein 24	AK098193|ARHGAP24|83478|Rho GTPase activating protein 24
hg18_v1_chr1_-_47468029_47468029	0.979131	SOX2.p2	M61108|TAL1|6886|T-cell acute lymphocytic leukemia 1	NM_003189|TAL1|6886|T-cell acute lymphocytic leukemia 1
hg18_v1_chr10_-_61570665_61570779	0.919388	SOX2.p2	AK292927|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	NM_001149|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	AK092527|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)
hg18_v1_chr17_-_44006808_44006847	0.912484	SOX2.p2	NM_002146|HOXB3|3213|homeobox B3	AK027609|HOXB3|3213|homeobox B3
hg18_v1_chr1_-_7923464_7923473	0.909762	SOX2.p2	U03397|TNFRSF9|3604|tumor necrosis factor receptor superfamily, member 9	BC006196|TNFRSF9|3604|tumor necrosis factor receptor superfamily, member 9	L12964|TNFRSF9|3604|tumor necrosis factor receptor superfamily, member 9	NM_001561|TNFRSF9|3604|tumor necrosis factor receptor superfamily, member 9
hg18_v1_chr3_-_143230124_143230196	0.888981	SOX2.p2	AK303634|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	U18422|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	BC007976|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	AK303181|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	NM_001178141|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	NM_001178142|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	NM_006286|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)
hg18_v1_chr18_+_3441589_3441674	0.886859	SOX2.p2	NM_170695|TGIF1|7050|TGFB-induced factor homeobox 1	NM_173210|TGIF1|7050|TGFB-induced factor homeobox 1	BC031268|TGIF1|7050|TGFB-induced factor homeobox 1
hg18_v1_chr3_-_3127057_3127057	0.882798	SOX2.p2	AK304256|IL5RA|3568|interleukin 5 receptor, alpha	NM_000564|IL5RA|3568|interleukin 5 receptor, alpha	NM_175724|IL5RA|3568|interleukin 5 receptor, alpha	NM_175725|IL5RA|3568|interleukin 5 receptor, alpha	NM_175726|IL5RA|3568|interleukin 5 receptor, alpha	NM_175727|IL5RA|3568|interleukin 5 receptor, alpha	NM_175728|IL5RA|3568|interleukin 5 receptor, alpha
hg18_v1_chr7_-_111633428_111633575	0.844345	SOX2.p2	AY233380|DOCK4|9732|dedicator of cytokinesis 4	BC117688|DOCK4|9732|dedicator of cytokinesis 4	BC117689|DOCK4|9732|dedicator of cytokinesis 4	BC117694|DOCK4|9732|dedicator of cytokinesis 4
hg18_v1_chr12_-_9804682_9804763	0.841544	SOX2.p2	AY238518|CD69|969|CD69 molecule	DQ893175|CD69|969|CD69 molecule	DQ896474|CD69|969|CD69 molecule	L07555|CD69|969|CD69 molecule	AK291869|CD69|969|CD69 molecule	AK303174|CD69|969|CD69 molecule	AK303383|CD69|969|CD69 molecule	BC007037|CD69|969|CD69 molecule	NM_001781|CD69|969|CD69 molecule	Z22576|CD69|969|CD69 molecule
hg18_v1_chr19_+_17923110_17923110	0.831207	SOX2.p2	NM_002248|KCNN1|3780|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1	U69883|KCNN1|3780|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1
hg18_v1_chr5_-_88155360_88155499	0.829729	SOX2.p2	EU446634|MEF2C|4208|myocyte enhancer factor 2C	EU832832|MEF2C|4208|myocyte enhancer factor 2C	FM163484|MEF2C|4208|myocyte enhancer factor 2C	FM180475|MEF2C|4208|myocyte enhancer factor 2C	GQ129219|MEF2C|4208|myocyte enhancer factor 2C	GQ129221|MEF2C|4208|myocyte enhancer factor 2C	GQ129392|MEF2C|4208|myocyte enhancer factor 2C	GQ129393|MEF2C|4208|myocyte enhancer factor 2C	NM_001193348|MEF2C|4208|myocyte enhancer factor 2C	NM_001193349|MEF2C|4208|myocyte enhancer factor 2C
hg18_v1_chr7_+_128802719_128802719	0.824039	SOX2.p2	AK316073|AHCYL2|23382|adenosylhomocysteinase-like 2	NM_001130722|AHCYL2|23382|adenosylhomocysteinase-like 2
hg18_v1_chr4_-_74307637_74307650	0.806962	SOX2.p2	BX648035|ANKRD17|26057|ankyrin repeat domain 17	AK300302|ANKRD17|26057|ankyrin repeat domain 17
hg18_v1_chr7_+_116447499_116447508	0.790762	SOX2.p2	AK093212|ST7|7982|suppression of tumorigenicity 7
hg18_v1_chr7_-_111633620_111633776	0.773919	SOX2.p2	AK095906|DOCK4|9732|dedicator of cytokinesis 4	AK309605|DOCK4|9732|dedicator of cytokinesis 4	NM_014705|DOCK4|9732|dedicator of cytokinesis 4
hg18_v1_chr11_+_129496792_129496884	0.76149	SOX2.p2	L23113|APLP2|334|amyloid beta (A4) precursor-like protein 2
hg18_v1_chr19_+_40824486_40824534	0.754883	SOX2.p2	NM_014209|ETV2|2116|ets variant 2	AK097439|ETV2|2116|ets variant 2	BC040908|ETV2|2116|ets variant 2
hg18_v1_chr2_+_108637698_108637699	0.750917	SOX2.p2	NM_001193485|LIMS1|3987|LIM and senescent cell antigen-like domains 1	AF527759|LIMS1|3987|LIM and senescent cell antigen-like domains 1
hg18_v1_chr6_-_74284522_74285965	0.749197	SOX2.p2	CR606729|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR591544|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR625724|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR619717|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR603959|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR625353|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR590407|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	DQ185041|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR603651|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR616704|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR603828|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR605857|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR613015|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	BC012509|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR624162|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR625682|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR606125|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR613220|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR608362|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR623409|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR595753|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR610218|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR601985|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR603053|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR597006|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR593301|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR592032|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR609311|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR618335|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR608355|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR617969|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR604172|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR610709|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	M27364|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR609287|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR623212|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR602993|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR606781|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR592507|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR610076|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	BC014892|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	BC022412|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	BC065761|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR614602|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR620971|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR618534|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR596406|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	BC014377|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR625936|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR604181|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR599305|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	BC063511|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	AK098587|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	AF211972|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR618799|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR590392|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	M29548|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR624039|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR621964|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR593256|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	AK222519|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	BC020477|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR607669|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	DQ867534|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	AF328730|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	AF397403|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR590136|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR592691|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR611331|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR618646|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR591227|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR608799|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1
hg18_v1_chr2_+_108637916_108637940	0.74649	SOX2.p2	AK302411|LIMS1|3987|LIM and senescent cell antigen-like domains 1	AK312178|LIMS3|96626|LIM and senescent cell antigen-like domains 3	BC054477|LIMS3|96626|LIM and senescent cell antigen-like domains 3	BC093812|LIMS3|96626|LIM and senescent cell antigen-like domains 3	BC112233|LIMS3|96626|LIM and senescent cell antigen-like domains 3
hg18_v1_chr7_+_139175420_139175703	0.745349	SOX2.p2	NM_001061|TBXAS1|6916|thromboxane A synthase 1 (platelet)	NM_001166253|TBXAS1|6916|thromboxane A synthase 1 (platelet)	NM_030984|TBXAS1|6916|thromboxane A synthase 1 (platelet)	BC041157|TBXAS1|6916|thromboxane A synthase 1 (platelet)	CR625096|TBXAS1|6916|thromboxane A synthase 1 (platelet)	AK296069|TBXAS1|6916|thromboxane A synthase 1 (platelet)	AK301164|TBXAS1|6916|thromboxane A synthase 1 (platelet)	AK303440|TBXAS1|6916|thromboxane A synthase 1 (platelet)	AK301049|TBXAS1|6916|thromboxane A synthase 1 (platelet)	M74055|TBXAS1|6916|thromboxane A synthase 1 (platelet)	S60133|TBXAS1|6916|thromboxane A synthase 1 (platelet)
hg18_v1_chr2_+_101874765_101874783	0.723815	SOX2.p2	BC045694|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4
hg18_v1_chr4_+_160408447_160408447	0.719203	SOX2.p2	AK294459|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2	NM_014247|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2
hg18_v1_chr2_+_101874809_101875119	0.714694	SOX2.p2	BC010909|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	BC040077|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	BC065036|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4
hg18_v1_chrX_+_86659370_86659552	0.710591	SOX2.p2	NM_019117|KLHL4|56062|kelch-like 4 (Drosophila)	NM_057162|KLHL4|56062|kelch-like 4 (Drosophila)	AK056457|KLHL4|56062|kelch-like 4 (Drosophila)	AB051474|KLHL4|56062|kelch-like 4 (Drosophila)	BC161675|KLHL4|56062|kelch-like 4 (Drosophila)	AL832514|KLHL4|56062|kelch-like 4 (Drosophila)	AF284765|KLHL4|56062|kelch-like 4 (Drosophila)	AF284766|KLHL4|56062|kelch-like 4 (Drosophila)	BC140839|KLHL4|56062|kelch-like 4 (Drosophila)	BC140840|KLHL4|56062|kelch-like 4 (Drosophila)	BC142652|KLHL4|56062|kelch-like 4 (Drosophila)	BC146677|KLHL4|56062|kelch-like 4 (Drosophila)
hg18_v1_chr3_+_190831909_190831998	0.705508	SOX2.p2	BC039815|TP63|8626|tumor protein p63	NM_001114978|TP63|8626|tumor protein p63	NM_001114979|TP63|8626|tumor protein p63	NM_003722|TP63|8626|tumor protein p63	AB016072|TP63|8626|tumor protein p63	AB016073|TP63|8626|tumor protein p63	AF116771|TP63|8626|tumor protein p63	Y16961|TP63|8626|tumor protein p63	EU446669|TP63|8626|tumor protein p63
hg18_v1_chr17_-_59817575_59817633	0.702044	SOX2.p2	AF281287|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF281288|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF281289|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF281290|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF281291|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF281292|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF281293|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF281294|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF281295|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF281296|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF281297|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF281298|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF281299|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF281300|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF281301|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF393676|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF393677|PECAM1|5175|platelet/endothelial cell adhesion molecule	AF393678|PECAM1|5175|platelet/endothelial cell adhesion molecule
hg18_v1_chr17_-_59817722_59817742	0.692065	SOX2.p2	BC022512|PECAM1|5175|platelet/endothelial cell adhesion molecule	BC051822|PECAM1|5175|platelet/endothelial cell adhesion molecule	NM_000442|PECAM1|5175|platelet/endothelial cell adhesion molecule
hg18_v1_chr22_-_25344037_25344088	0.684704	SOX2.p2	BC036790|CRYBB1|1414|crystallin, beta B1
hg18_v1_chr3_-_13032130_13032306	0.670339	SOX2.p2	
hg18_v1_chr8_+_39890484_39890598	0.667774	SOX2.p2	NM_002164|IDO1|3620|indoleamine 2,3-dioxygenase 1	AK313259|IDO1|3620|indoleamine 2,3-dioxygenase 1	CR614485|IDO1|3620|indoleamine 2,3-dioxygenase 1	BC027882|IDO1|3620|indoleamine 2,3-dioxygenase 1	X17668|IDO1|3620|indoleamine 2,3-dioxygenase 1	CR613807|IDO1|3620|indoleamine 2,3-dioxygenase 1	CR616634|IDO1|3620|indoleamine 2,3-dioxygenase 1	CR621546|IDO1|3620|indoleamine 2,3-dioxygenase 1	CR591703|IDO1|3620|indoleamine 2,3-dioxygenase 1	AY221100|IDO1|3620|indoleamine 2,3-dioxygenase 1
hg18_v1_chr1_+_196874867_196875040	0.648716	SOX2.p2	BC121086|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	BC121087|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	BC127656|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	BC127657|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	BC148257|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	AY567999|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	AY429565|PTPRC|5788|protein tyrosine phosphatase, receptor type, C
hg18_v1_chr5_+_76470829_76470856	0.646455	SOX2.p2	
hg18_v1_chr17_-_59817654_59817680	0.643281	SOX2.p2	M37780|PECAM1|5175|platelet/endothelial cell adhesion molecule	M28526|PECAM1|5175|platelet/endothelial cell adhesion molecule
hg18_v1_chr2_+_143603439_143603483	0.641657	SOX2.p2	AK303490|ARHGAP15|55843|Rho GTPase activating protein 15	BC016701|ARHGAP15|55843|Rho GTPase activating protein 15	BC038976|ARHGAP15|55843|Rho GTPase activating protein 15
hg18_v1_chr22_+_25383392_25383552	0.639675	SOX2.p2	AB263414|MIAT|440823|myocardial infarction associated transcript (non-protein coding)	AB263415|MIAT|440823|myocardial infarction associated transcript (non-protein coding)	AB263416|MIAT|440823|myocardial infarction associated transcript (non-protein coding)	AB263417|MIAT|440823|myocardial infarction associated transcript (non-protein coding)	AK098833|MIAT|440823|myocardial infarction associated transcript (non-protein coding)
hg18_v1_chr6_-_139654807_139654900	0.632995	SOX2.p2	BX647633|TXLNB|167838|taxilin beta	AL834248|TXLNB|167838|taxilin beta	AL831988|TXLNB|167838|taxilin beta	AK314725|TXLNB|167838|taxilin beta	BX647477|TXLNB|167838|taxilin beta	BC115383|TXLNB|167838|taxilin beta	BC115384|TXLNB|167838|taxilin beta	AB085905|TXLNB|167838|taxilin beta	NM_153235|TXLNB|167838|taxilin beta
hg18_v1_chr9_+_100745531_100746077	0.632889	SOX2.p2	AK308438|COL15A1|1306|collagen, type XV, alpha 1	CR595376|COL15A1|1306|collagen, type XV, alpha 1	NM_001855|COL15A1|1306|collagen, type XV, alpha 1	AK095885|COL15A1|1306|collagen, type XV, alpha 1	L25286|COL15A1|1306|collagen, type XV, alpha 1	D21230|COL15A1|1306|collagen, type XV, alpha 1
hg18_v1_chr1_+_242283906_242283930	0.632328	SOX2.p2	
hg18_v1_chr1_+_84540921_84540921	0.629297	SOX2.p2	BC037973|SAMD13|148418|sterile alpha motif domain containing 13	NM_001134664|SAMD13|148418|sterile alpha motif domain containing 13
hg18_v1_chr10_-_11614279_11614279	0.629039	SOX2.p2	NM_001080491|USP6NL|9712|USP6 N-terminal like
hg18_v1_chr22_-_25343959_25344007	0.621237	SOX2.p2	CR456425|CRYBB1|1414|crystallin, beta B1	NM_001887|CRYBB1|1414|crystallin, beta B1	U35340|CRYBB1|1414|crystallin, beta B1
hg18_v1_chr17_-_59817456_59817545	0.614741	SOX2.p2	AK304166|PECAM1|5175|platelet/endothelial cell adhesion molecule	DQ893644|PECAM1|5175|platelet/endothelial cell adhesion molecule	AK290692|PECAM1|5175|platelet/endothelial cell adhesion molecule
hg18_v1_chr12_-_101115677_101115743	0.61291	SOX2.p2	DQ892335|PMCH|5367|pro-melanin-concentrating hormone	DQ895540|PMCH|5367|pro-melanin-concentrating hormone	M57703|PMCH|5367|pro-melanin-concentrating hormone	BC018048|PMCH|5367|pro-melanin-concentrating hormone	NM_002674|PMCH|5367|pro-melanin-concentrating hormone
hg18_v1_chr8_+_32623792_32623792	0.611416	SOX2.p2	AK289927|NRG1|3084|neuregulin 1	NM_013959|NRG1|3084|neuregulin 1
hg18_v1_chr2_-_110665188_110665188	0.610949	SOX2.p2	BC094740|LIMS3-LOC440895|100271835|LIMS3-LOC440895 read-through	NM_033514|LIMS3|96626|LIM and senescent cell antigen-like domains 3
hg18_v1_chr7_+_102340579_102340757	0.604573	SOX2.p2	NM_001031692|LRRC17|10234|leucine rich repeat containing 17	NM_005824|LRRC17|10234|leucine rich repeat containing 17	AK226021|LRRC17|10234|leucine rich repeat containing 17	AK225701|LRRC17|10234|leucine rich repeat containing 17	U32907|LRRC17|10234|leucine rich repeat containing 17	AK290305|LRRC17|10234|leucine rich repeat containing 17	BC027903|LRRC17|10234|leucine rich repeat containing 17	AY358889|LRRC17|10234|leucine rich repeat containing 17
hg18_v1_chr7_+_111633878_111633938	0.604342	SOX2.p2	AF209198|ZNF277|11179|zinc finger protein 277	NM_021994|ZNF277|11179|zinc finger protein 277
hg18_v1_chr6_+_105511615_105511615	0.601926	SOX2.p2	AK131411|LIN28B|389421|lin-28 homolog B (C. elegans)	DQ127228|LIN28B|389421|lin-28 homolog B (C. elegans)	NM_001004317|LIN28B|389421|lin-28 homolog B (C. elegans)
hg18_v1_chr1_-_51660328_51660380	0.596866	SOX2.p2	AK090936|EPS15|2060|epidermal growth factor receptor pathway substrate 15	AK308128|EPS15|2060|epidermal growth factor receptor pathway substrate 15	BX647676|EPS15|2060|epidermal growth factor receptor pathway substrate 15	NM_001159969|EPS15|2060|epidermal growth factor receptor pathway substrate 15
hg18_v1_chr5_+_143171918_143171984	0.596511	SOX2.p2	AF103884|HMHB1|57824|histocompatibility (minor) HB-1	NM_021182|HMHB1|57824|histocompatibility (minor) HB-1	BC096711|HMHB1|57824|histocompatibility (minor) HB-1	BC098145|HMHB1|57824|histocompatibility (minor) HB-1	BC098244|HMHB1|57824|histocompatibility (minor) HB-1	BC098251|HMHB1|57824|histocompatibility (minor) HB-1	BC104412|HMHB1|57824|histocompatibility (minor) HB-1	BC104413|HMHB1|57824|histocompatibility (minor) HB-1	BC113894|HMHB1|57824|histocompatibility (minor) HB-1	BC113971|HMHB1|57824|histocompatibility (minor) HB-1
hg18_v1_chr6_-_76259976_76260217	0.595995	SOX2.p2	AK290232|FILIP1|27145|filamin A interacting protein 1	BC136443|FILIP1|27145|filamin A interacting protein 1	BC136444|FILIP1|27145|filamin A interacting protein 1	AL832009|FILIP1|27145|filamin A interacting protein 1	AK097021|FILIP1|27145|filamin A interacting protein 1	BX647178|FILIP1|27145|filamin A interacting protein 1	NM_015687|FILIP1|27145|filamin A interacting protein 1
hg18_v1_chr5_-_88004891_88004912	0.593842	SOX2.p2	AK311230|LOC645323|645323|hypothetical LOC645323	AK309800|LOC645323|645323|hypothetical LOC645323	AK308694|LOC645323|645323|hypothetical LOC645323	BC036480|LOC645323|645323|hypothetical LOC645323
hg18_v1_chr11_-_85107569_85107858	0.592632	SOX2.p2	BC110315|SYTL2|54843|synaptotagmin-like 2	CR595112|SYTL2|54843|synaptotagmin-like 2	BC068495|SYTL2|54843|synaptotagmin-like 2	AK298604|SYTL2|54843|synaptotagmin-like 2	AK074737|SYTL2|54843|synaptotagmin-like 2	NM_206929|SYTL2|54843|synaptotagmin-like 2	AK092121|SYTL2|54843|synaptotagmin-like 2
hg18_v1_chr13_-_32658215_32658215	0.587993	SOX2.p2	AY082590|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	BC046563|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	NM_178007|STARD13|90627|StAR-related lipid transfer (START) domain containing 13
hg18_v1_chr17_-_59818033_59818157	0.583549	SOX2.p2	X96849|PECAM1|5175|platelet/endothelial cell adhesion molecule
hg18_v1_chr14_+_76298693_76298917	0.582826	SOX2.p2	BC051896|VASH1|22846|vasohibin 1	AK291377|VASH1|22846|vasohibin 1
hg18_v1_chr1_+_242281199_242281214	0.579535	SOX2.p2	AK291408|ZNF238|10472|zinc finger protein 238	AK293892|ZNF238|10472|zinc finger protein 238	BC036677|ZNF238|10472|zinc finger protein 238
hg18_v1_chr17_-_18890963_18891070	0.573093	SOX2.p2	BT019981|GRAP|10750|GRB2-related adaptor protein	CR541941|GRAP|10750|GRB2-related adaptor protein	CR541966|GRAP|10750|GRB2-related adaptor protein	BC035856|GRAP|10750|GRB2-related adaptor protein	CR615744|GRAP|10750|GRB2-related adaptor protein	CR624975|GRAP|10750|GRB2-related adaptor protein	U52518|GRAP|10750|GRB2-related adaptor protein	BC063035|GRAP|10750|GRB2-related adaptor protein	CR600595|GRAP|10750|GRB2-related adaptor protein	NM_006613|GRAP|10750|GRB2-related adaptor protein	CR595033|GRAP|10750|GRB2-related adaptor protein
hg18_v1_chr21_+_34112456_34112625	0.571846	SOX2.p2	AY340592|ITSN1|6453|intersectin 1 (SH3 domain protein)	AY340593|ITSN1|6453|intersectin 1 (SH3 domain protein)	AF180522|ITSN1|6453|intersectin 1 (SH3 domain protein)	AY138139|ITSN1|6453|intersectin 1 (SH3 domain protein)
hg18_v1_chr4_+_154397975_154398004	0.571013	SOX2.p2	BC025417|TRIM2|23321|tripartite motif containing 2
hg18_v1_chr17_-_44058612_44058963	0.569159	SOX2.p2	AK056123|HOXB9|3219|homeobox B9	AK315480|HOXB9|3219|homeobox B9	BC015565|HOXB9|3219|homeobox B9	AK056414|HOXB9|3219|homeobox B9	NM_024017|HOXB9|3219|homeobox B9
hg18_v1_chr7_-_5533621_5533848	0.568831	SOX2.p2	CR604039|ACTB|60|actin, beta	CR614609|ACTB|60|actin, beta	CR593025|ACTB|60|actin, beta	CR617617|ACTB|60|actin, beta	BC009636|ACTB|60|actin, beta
hg18_v1_chr1_+_165564904_165564941	0.559018	SOX2.p2	NM_001198783|POU2F1|5451|POU class 2 homeobox 1
hg18_v1_chr19_+_39402167_39402274	0.557939	SOX2.p2	AL117499|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)
hg18_v1_chr3_+_44665220_44665280	0.554281	SOX2.p2	NM_003420|ZNF35|7584|zinc finger protein 35	AK300581|ZNF35|7584|zinc finger protein 35	AK314821|ZNF35|7584|zinc finger protein 35	BC013597|ZNF35|7584|zinc finger protein 35	BC015892|ZNF35|7584|zinc finger protein 35	X07289|ZNF35|7584|zinc finger protein 35
hg18_v1_chr2_+_143603368_143603433	0.553895	SOX2.p2	NM_018460|ARHGAP15|55843|Rho GTPase activating protein 15	AK308219|ARHGAP15|55843|Rho GTPase activating protein 15	AF212222|ARHGAP15|55843|Rho GTPase activating protein 15	AF217507|ARHGAP15|55843|Rho GTPase activating protein 15	AF217522|ARHGAP15|55843|Rho GTPase activating protein 15	AY219338|ARHGAP15|55843|Rho GTPase activating protein 15	AK226014|ARHGAP15|55843|Rho GTPase activating protein 15
hg18_v1_chr11_-_85108030_85108030	0.553632	SOX2.p2	NM_001162952|SYTL2|54843|synaptotagmin-like 2	NM_206930|SYTL2|54843|synaptotagmin-like 2
hg18_v1_chr9_+_126460511_126460540	0.551805	SOX2.p2	
hg18_v1_chr2_+_110013297_110013297	0.551183	SOX2.p2	BC094740|LIMS3-LOC440895|100271835|LIMS3-LOC440895 read-through	NM_033514|LIMS3|96626|LIM and senescent cell antigen-like domains 3
hg18_v1_chr2_-_198248828_198249012	0.550227	SOX2.p2	AK055136|RFTN2|130132|raftlin family member 2	NM_144629|RFTN2|130132|raftlin family member 2	BC111069|RFTN2|130132|raftlin family member 2
hg18_v1_chrX_+_133952633_133952722	0.547131	SOX2.p2	BC008642|LOC644538|644538|hypothetical protein LOC644538	NM_001163438|LOC644538|644538|hypothetical protein LOC644538
hg18_v1_chr1_-_152431175_152431232	0.546332	SOX2.p2	X04201|TPM3|7170|tropomyosin 3	BC062740|TPM3|7170|tropomyosin 3	AK092690|TPM3|7170|tropomyosin 3	BC008407|TPM3|7170|tropomyosin 3	BC008425|TPM3|7170|tropomyosin 3	AK056997|TPM3|7170|tropomyosin 3	NM_152263|TPM3|7170|tropomyosin 3
hg18_v1_chr1_+_1062137_1062259	0.54613	SOX2.p2	BC028014|LOC254099|254099|hypothetical protein LOC254099
hg18_v1_chr1_+_165565006_165565121	0.544857	SOX2.p2	AY113189|POU2F1|5451|POU class 2 homeobox 1	BC001664|POU2F1|5451|POU class 2 homeobox 1	BC003571|POU2F1|5451|POU class 2 homeobox 1
hg18_v1_chr1_+_196874759_196874833	0.544276	SOX2.p2	NM_002838|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	NM_080921|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	NM_080923|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	AK308217|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	AK310898|PTPRC|5788|protein tyrosine phosphatase, receptor type, C
hg18_v1_chr8_-_93144039_93144111	0.540705	SOX2.p2	
hg18_v1_chr1_-_32574185_32574443	0.539731	SOX2.p2	CR602280|MARCKSL1|65108|MARCKS-like 1	AM393505|MARCKSL1|65108|MARCKS-like 1	DQ893237|MARCKSL1|65108|MARCKS-like 1	DQ896567|MARCKSL1|65108|MARCKS-like 1	X70326|MARCKSL1|65108|MARCKS-like 1	CR593904|MARCKSL1|65108|MARCKS-like 1	CR611715|MARCKSL1|65108|MARCKS-like 1	CR611461|MARCKSL1|65108|MARCKS-like 1	CR607885|MARCKSL1|65108|MARCKS-like 1	CR625318|MARCKSL1|65108|MARCKS-like 1	CR599424|MARCKSL1|65108|MARCKS-like 1	CR608551|MARCKSL1|65108|MARCKS-like 1	CR603178|MARCKSL1|65108|MARCKS-like 1	AL713653|MARCKSL1|65108|MARCKS-like 1	AY007131|MARCKSL1|65108|MARCKS-like 1	CR595141|MARCKSL1|65108|MARCKS-like 1	CR595693|MARCKSL1|65108|MARCKS-like 1	BC007904|MARCKSL1|65108|MARCKS-like 1	CR602564|MARCKSL1|65108|MARCKS-like 1	BC066915|MARCKSL1|65108|MARCKS-like 1	NM_023009|MARCKSL1|65108|MARCKS-like 1	CR625187|MARCKSL1|65108|MARCKS-like 1	CR590657|MARCKSL1|65108|MARCKS-like 1	CR594797|MARCKSL1|65108|MARCKS-like 1	CR596259|MARCKSL1|65108|MARCKS-like 1	CR596703|MARCKSL1|65108|MARCKS-like 1	CR596974|MARCKSL1|65108|MARCKS-like 1	CR597180|MARCKSL1|65108|MARCKS-like 1	CR599096|MARCKSL1|65108|MARCKS-like 1	CR617460|MARCKSL1|65108|MARCKS-like 1	CR621540|MARCKSL1|65108|MARCKS-like 1	CR624801|MARCKSL1|65108|MARCKS-like 1
hg18_v1_chr1_-_50661716_50661729	0.538286	SOX2.p2	NM_032110|DMRTA2|63950|DMRT-like family A2
hg18_v1_chr3_+_148593911_148593934	0.536683	SOX2.p2	
hg18_v1_chr13_+_110653407_110653440	0.535456	SOX2.p2	AK300272|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7
hg18_v1_chr10_-_25281510_25281567	0.533121	SOX2.p2	AF226056|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	CR615591|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	AB209792|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	AK222674|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	AK294130|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	AK021950|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	NM_020200|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	BC008662|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	AK309614|PRTFDC1|56952|phosphoribosyl transferase domain containing 1
hg18_v1_chr17_+_53761293_53761374	0.528145	SOX2.p2	AK311311|LOC100506779|100506779|hypothetical LOC100506779	AK311208|LOC100506779|100506779|hypothetical LOC100506779
hg18_v1_chr11_-_83071084_83071115	0.525422	SOX2.p2	AK299778|DLG2|1740|discs, large homolog 2 (Drosophila)	CR933674|DLG2|1740|discs, large homolog 2 (Drosophila)	NM_001142702|DLG2|1740|discs, large homolog 2 (Drosophila)
hg18_v1_chr18_+_3439972_3440218	0.523393	SOX2.p2	NM_173209|TGIF1|7050|TGFB-induced factor homeobox 1	NM_173208|TGIF1|7050|TGFB-induced factor homeobox 1	NM_003244|TGIF1|7050|TGFB-induced factor homeobox 1	AK309471|TGIF1|7050|TGFB-induced factor homeobox 1	CR606247|TGIF1|7050|TGFB-induced factor homeobox 1	X89750|TGIF1|7050|TGFB-induced factor homeobox 1	CR614605|TGIF1|7050|TGFB-induced factor homeobox 1
hg18_v1_chr4_-_101658094_101658272	0.520995	SOX2.p2	AB034695|EMCN|51705|endomucin	AK222741|EMCN|51705|endomucin	AK304568|EMCN|51705|endomucin	AK291831|EMCN|51705|endomucin	BC017781|EMCN|51705|endomucin	AF205940|EMCN|51705|endomucin	AK026875|EMCN|51705|endomucin	AK313504|EMCN|51705|endomucin	NM_001159694|EMCN|51705|endomucin	NM_016242|EMCN|51705|endomucin
hg18_v1_chr16_+_55373241_55373268	0.518604	SOX2.p2	AK056637|NUP93|9688|nucleoporin 93kDa
hg18_v1_chr17_-_53761119_53761150	0.50307	SOX2.p2	AB014512|BZRAP1|9256|benzodiazapine receptor (peripheral) associated protein 1	BC150279|BZRAP1|9256|benzodiazapine receptor (peripheral) associated protein 1	NM_004758|BZRAP1|9256|benzodiazapine receptor (peripheral) associated protein 1	NM_024418|BZRAP1|9256|benzodiazapine receptor (peripheral) associated protein 1
hg18_v1_chr6_+_100161370_100161370	0.502858	SOX2.p2	AY004253|PRDM13|59336|PR domain containing 13	NM_021620|PRDM13|59336|PR domain containing 13
hg18_v1_chr3_-_158704056_158704108	0.497602	SOX2.p2	BC078142|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)	BC057999|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)	NM_001167915|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)	NM_001167916|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)
hg18_v1_chr10_+_11247243_11247259	0.490788	SOX2.p2	AK316354|CELF2|10659|CUGBP, Elav-like family member 2
hg18_v1_chr1_-_229058404_229058404	0.486213	SOX2.p2	AK292433|C1orf198|84886|chromosome 1 open reading frame 198	NM_001136495|C1orf198|84886|chromosome 1 open reading frame 198
hg18_v1_chr1_+_196874839_196874857	0.483727	SOX2.p2	AK307635|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	AK130573|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	AK292131|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	AK299986|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	AK303539|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	BC017863|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	Y00638|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	BC014239|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	BC031525|PTPRC|5788|protein tyrosine phosphatase, receptor type, C
hg18_v1_chr8_-_93176819_93176887	0.481963	SOX2.p2	AK312592|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	AK297616|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg18_v1_chr5_+_140871107_140871323	0.478696	SOX2.p2	
hg18_v1_chr3_+_186563529_186563723	0.474375	SOX2.p2	AK296961|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13	AB001872|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13	NM_004721|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13	BC111726|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13
hg18_v1_chr5_+_140215778_140215817	0.473516	SOX2.p2	BC130447|PCDHA10|56139|protocadherin alpha 10	AF152306|PCDHA10|56139|protocadherin alpha 10	AF152475|PCDHA10|56139|protocadherin alpha 10	AF169689|PCDHA10|56139|protocadherin alpha 10	NM_018901|PCDHA10|56139|protocadherin alpha 10	NM_031859|PCDHA10|56139|protocadherin alpha 10	NM_031860|PCDHA10|56139|protocadherin alpha 10
hg18_v1_chr19_-_53941835_53941979	0.471536	SOX2.p2	AB195682|IZUMO1|284359|izumo sperm-egg fusion 1	BC034769|IZUMO1|284359|izumo sperm-egg fusion 1	NM_182575|IZUMO1|284359|izumo sperm-egg fusion 1	AK301750|IZUMO1|284359|izumo sperm-egg fusion 1
hg18_v1_chr13_+_45174446_45174446	0.471429	SOX2.p2	AK093129|SPERT|220082|spermatid associated	NM_152719|SPERT|220082|spermatid associated
hg18_v1_chr5_-_178977441_178977522	0.469361	SOX2.p2	AK298193|HNRNPH1|3187|heterogeneous nuclear ribonucleoprotein H1 (H)
hg18_v1_chrX_+_12903145_12903177	0.466664	SOX2.p2	BC107789|TMSB4X|7114|thymosin beta 4, X-linked	NM_183049|TMSL3|7117|thymosin-like 3	NM_021109|TMSB4X|7114|thymosin beta 4, X-linked	M17733|TMSB4X|7114|thymosin beta 4, X-linked	AK055976|TMSB4X|7114|thymosin beta 4, X-linked	AK057827|TMSB4X|7114|thymosin beta 4, X-linked	AK311747|TMSB4X|7114|thymosin beta 4, X-linked	BC016732|TMSB4X|7114|thymosin beta 4, X-linked	BC022857|TMSB4X|7114|thymosin beta 4, X-linked	BC062436|TMSB4X|7114|thymosin beta 4, X-linked	BC070248|TMSB4X|7114|thymosin beta 4, X-linked	BC070249|TMSB4X|7114|thymosin beta 4, X-linked	BC083509|TMSB4X|7114|thymosin beta 4, X-linked	BC092437|TMSB4X|7114|thymosin beta 4, X-linked	BC104666|TMSB4X|7114|thymosin beta 4, X-linked	BC061586|TMSB4X|7114|thymosin beta 4, X-linked	BC151215|TMSB4X|7114|thymosin beta 4, X-linked	BC139925|TMSB4X|7114|thymosin beta 4, X-linked	CR621963|TMSL3|7117|thymosin-like 3	CR624038|TMSL3|7117|thymosin-like 3	BC101790|TMSB4X|7114|thymosin beta 4, X-linked	BC101792|TMSB4X|7114|thymosin beta 4, X-linked	BC001631|TMSB4X|7114|thymosin beta 4, X-linked	BC064954|TMSB4X|7114|thymosin beta 4, X-linked	BC128103|TMSB4X|7114|thymosin beta 4, X-linked	BC141975|TMSB4X|7114|thymosin beta 4, X-linked	BC141976|TMSB4X|7114|thymosin beta 4, X-linked	BC128102|TMSB4X|7114|thymosin beta 4, X-linked
hg18_v1_chr14_+_87541220_87541286	0.466382	SOX2.p2	NM_003608|GPR65|8477|G protein-coupled receptor 65	AK313797|GPR65|8477|G protein-coupled receptor 65	BC035633|GPR65|8477|G protein-coupled receptor 65	BC071715|GPR65|8477|G protein-coupled receptor 65
hg18_v1_chr8_-_93176618_93176665	0.465858	SOX2.p2	BC005850|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	BC067078|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	CR619328|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	AK057707|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198629|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198630|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198632|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_175635|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg18_v1_chr1_+_149395728_149395781	0.465518	SOX2.p2	NM_024575|TNFAIP8L2|79626|tumor necrosis factor, alpha-induced protein 8-like 2	AF271774|TNFAIP8L2|79626|tumor necrosis factor, alpha-induced protein 8-like 2	AL833373|TNFAIP8L2|79626|tumor necrosis factor, alpha-induced protein 8-like 2	AK027120|TNFAIP8L2|79626|tumor necrosis factor, alpha-induced protein 8-like 2	AK225472|TNFAIP8L2|79626|tumor necrosis factor, alpha-induced protein 8-like 2	BC063014|TNFAIP8L2|79626|tumor necrosis factor, alpha-induced protein 8-like 2
hg18_v1_chr11_-_72057755_72057755	0.465088	SOX2.p2	AY495087|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated	NM_001146209|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated
hg18_v1_chr8_-_6407882_6408337	0.464194	SOX2.p2	AF187858|ANGPT2|285|angiopoietin 2	AB009865|ANGPT2|285|angiopoietin 2	BC126200|ANGPT2|285|angiopoietin 2	BC126202|ANGPT2|285|angiopoietin 2	BC143902|ANGPT2|285|angiopoietin 2	AF218015|ANGPT2|285|angiopoietin 2	BC022490|ANGPT2|285|angiopoietin 2	CR620685|ANGPT2|285|angiopoietin 2	AK075219|ANGPT2|285|angiopoietin 2	AK225698|ANGPT2|285|angiopoietin 2	AK290070|ANGPT2|285|angiopoietin 2	AK310171|ANGPT2|285|angiopoietin 2	AK312541|ANGPT2|285|angiopoietin 2	NM_001118887|ANGPT2|285|angiopoietin 2	NM_001118888|ANGPT2|285|angiopoietin 2	NM_001147|ANGPT2|285|angiopoietin 2	AJ289781|ANGPT2|285|angiopoietin 2
hg18_v1_chr10_+_11247449_11247455	0.462305	SOX2.p2	AK302681|CELF2|10659|CUGBP, Elav-like family member 2	AK310038|CELF2|10659|CUGBP, Elav-like family member 2
hg18_v1_chr12_-_10464308_10464460	0.461982	SOX2.p2	AF078550|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3	AF350016|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3	L14542|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3	NM_002261|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3	NM_007333|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3
hg18_v1_chr7_-_92693716_92693722	0.459566	SOX2.p2	AK096002|HEPACAM2|253012|HEPACAM family member 2	AK298361|HEPACAM2|253012|HEPACAM family member 2	NM_001039372|HEPACAM2|253012|HEPACAM family member 2
hg18_v1_chr7_+_111633972_111634041	0.457274	SOX2.p2	AL713791|ZNF277|11179|zinc finger protein 277	AK314630|ZNF277|11179|zinc finger protein 277	BC020626|ZNF277|11179|zinc finger protein 277	AK027128|ZNF277|11179|zinc finger protein 277	AF308819|ZNF277|11179|zinc finger protein 277
hg18_v1_chr1_-_114215768_114215897	0.456816	SOX2.p2	AF001846|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	GU479452|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	AF150732|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	AF077031|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	BC071670|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	AK303124|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	AK310570|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	AK310698|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	BC017785|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	NM_001193431|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	NM_012411|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	NM_015967|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)
hg18_v1_chr19_-_45016587_45016689	0.456102	SOX2.p2	AF205861|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	BC025291|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	AK074971|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	BC009688|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	AK302127|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	BC018751|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	NM_004714|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	NM_006483|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	NM_006484|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	Y17999|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B
hg18_v1_chr9_+_124835608_124835769	0.455583	SOX2.p2	AK294531|RABGAP1|23637|RAB GTPase activating protein 1	AK299686|GPR21|2844|G protein-coupled receptor 21	AK313539|GPR21|2844|G protein-coupled receptor 21
hg18_v1_chr17_-_24491521_24491554	0.454412	SOX2.p2	AB177860|MYO18A|399687|myosin XVIIIA	AY703984|MYO18A|399687|myosin XVIIIA	AK303522|MYO18A|399687|myosin XVIIIA	AK302725|MYO18A|399687|myosin XVIIIA
hg18_v1_chr10_+_11247419_11247444	0.452845	SOX2.p2	AK304216|CELF2|10659|CUGBP, Elav-like family member 2
hg18_v1_chr15_+_21361546_21361546	0.452695	SOX2.p2	NM_005664|MKRN3|7681|makorin ring finger protein 3
hg18_v1_chr10_+_11247467_11247530	0.450584	SOX2.p2	AK295511|CELF2|10659|CUGBP, Elav-like family member 2
hg18_v1_chr3_+_19164973_19165044	0.450023	SOX2.p2	AK295633|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8	AY053503|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8	NM_144633|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8	AB209053|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8	AK309034|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8
hg18_v1_chrX_-_134013644_134013946	0.446003	SOX2.p2	BC008096|FAM127B|26071|family with sequence similarity 127, member B	BC071991|FAM127B|26071|family with sequence similarity 127, member B	AL117556|FAM127B|26071|family with sequence similarity 127, member B	BC000393|FAM127B|26071|family with sequence similarity 127, member B	BC019300|FAM127B|26071|family with sequence similarity 127, member B	CR601523|FAM127B|26071|family with sequence similarity 127, member B	NM_001078172|FAM127B|26071|family with sequence similarity 127, member B	NM_001134321|FAM127B|26071|family with sequence similarity 127, member B
hg18_v1_chr12_-_101396459_101396558	0.445621	SOX2.p2	M37484|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	NM_001111284|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg18_v1_chr22_+_19601619_19601720	0.444861	SOX2.p2	AK292909|CRKL|1399|v-crk sarcoma virus CT10 oncogene homolog (avian)-like	NM_005207|CRKL|1399|v-crk sarcoma virus CT10 oncogene homolog (avian)-like	X59656|CRKL|1399|v-crk sarcoma virus CT10 oncogene homolog (avian)-like
hg18_v1_chr8_-_108579270_108579458	0.444265	SOX2.p2	U83508|ANGPT1|284|angiopoietin 1	BC152411|ANGPT1|284|angiopoietin 1	BC152419|ANGPT1|284|angiopoietin 1	D13628|ANGPT1|284|angiopoietin 1	AY055342|ANGPT1|284|angiopoietin 1	NM_001146|ANGPT1|284|angiopoietin 1	BX648814|ANGPT1|284|angiopoietin 1
hg18_v1_chr5_+_176494690_176494747	0.441753	SOX2.p2	AF322907|NSD1|64324|nuclear receptor binding SET domain protein 1	AY049721|NSD1|64324|nuclear receptor binding SET domain protein 1	BC144629|NSD1|64324|nuclear receptor binding SET domain protein 1	BC150628|NSD1|64324|nuclear receptor binding SET domain protein 1	BC139789|NSD1|64324|nuclear receptor binding SET domain protein 1
hg18_v1_chr11_-_117600918_117601018	0.441612	SOX2.p2	AK090409|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1	AY138965|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1	AY358362|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1	AY093686|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1	AK298722|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1	AK300851|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1	AK301099|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1	AJ515553|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1	NM_001098526|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1
hg18_v1_chr7_-_26198673_26198679	0.434116	SOX2.p2	BX538099|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1
hg18_v1_chr8_+_67201684_67202105	0.433946	SOX2.p2	AK091310|TRIM55|84675|tripartite motif containing 55	AJ243488|TRIM55|84675|tripartite motif containing 55	AJ243489|TRIM55|84675|tripartite motif containing 55	AJ277493|TRIM55|84675|tripartite motif containing 55	AJ431704|TRIM55|84675|tripartite motif containing 55	NM_033058|TRIM55|84675|tripartite motif containing 55	NM_184085|TRIM55|84675|tripartite motif containing 55	NM_184086|TRIM55|84675|tripartite motif containing 55	NM_184087|TRIM55|84675|tripartite motif containing 55	AJ291712|TRIM55|84675|tripartite motif containing 55	BC007750|TRIM55|84675|tripartite motif containing 55	AK091728|TRIM55|84675|tripartite motif containing 55	BT007212|TRIM55|84675|tripartite motif containing 55
hg18_v1_chr7_-_112515035_112515051	0.426026	SOX2.p2	AK309392|GPR85|54329|G protein-coupled receptor 85	AF250237|GPR85|54329|G protein-coupled receptor 85	AK302769|GPR85|54329|G protein-coupled receptor 85
hg18_v1_chr4_-_176970407_176970464	0.421228	SOX2.p2	BC010461|GPM6A|2823|glycoprotein M6A	BC022508|GPM6A|2823|glycoprotein M6A	D49958|GPM6A|2823|glycoprotein M6A
hg18_v1_chr5_-_150501393_150501408	0.41919	SOX2.p2	AK303078|ANXA6|309|annexin A6	NM_001193544|ANXA6|309|annexin A6
hg18_v1_chr22_-_48865980_48866160	0.419162	SOX2.p2	AK295106|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1	AK299841|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1	AF319633|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1	D25217|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1
hg18_v1_chr12_+_6915698_6915737	0.417272	SOX2.p2	
hg18_v1_chr8_+_21833162_21833227	0.414999	SOX2.p2	AK291472|XPO7|23039|exportin 7	AB018288|XPO7|23039|exportin 7	AF064729|XPO7|23039|exportin 7
hg18_v1_chr12_-_47735373_47735373	0.414942	SOX2.p2	AF010403|MLL2|8085|myeloid/lymphoid or mixed-lineage leukemia 2	NM_003482|MLL2|8085|myeloid/lymphoid or mixed-lineage leukemia 2
hg18_v1_chr22_-_48865864_48865869	0.414386	SOX2.p2	BC028425|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1	BC070042|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1
hg18_v1_chr1_+_181028016_181028016	0.414163	SOX2.p2	AF338436|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)	NM_030769|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)
hg18_v1_chr10_+_17310475_17310610	0.413582	SOX2.p2	BC066956|VIM|7431|vimentin
hg18_v1_chr22_+_19601723_19601939	0.410687	SOX2.p2	BC043500|CRKL|1399|v-crk sarcoma virus CT10 oncogene homolog (avian)-like
hg18_v1_chr4_+_86918870_86918874	0.40775	SOX2.p2	NM_001042669|ARHGAP24|83478|Rho GTPase activating protein 24
hg18_v1_chr19_+_44886785_44886981	0.406644	SOX2.p2	AF267852|LGALS14|56891|lectin, galactoside-binding, soluble, 14	AF367430|LGALS14|56891|lectin, galactoside-binding, soluble, 14	AF367431|LGALS14|56891|lectin, galactoside-binding, soluble, 14	AF367432|LGALS14|56891|lectin, galactoside-binding, soluble, 14	NM_020129|LGALS14|56891|lectin, galactoside-binding, soluble, 14	NM_203471|LGALS14|56891|lectin, galactoside-binding, soluble, 14	BC022257|LGALS14|56891|lectin, galactoside-binding, soluble, 14	AK312040|LGALS14|56891|lectin, galactoside-binding, soluble, 14	FJ613341|LGALS14|56891|lectin, galactoside-binding, soluble, 14	FJ613342|LGALS14|56891|lectin, galactoside-binding, soluble, 14
hg18_v1_chrX_-_19727775_19727818	0.40509	SOX2.p2	AK293234|SH3KBP1|30011|SH3-domain kinase binding protein 1	AF542051|SH3KBP1|30011|SH3-domain kinase binding protein 1
hg18_v1_chr22_+_19601721_19601722	0.403795	SOX2.p2	BC026248|CRKL|1399|v-crk sarcoma virus CT10 oncogene homolog (avian)-like
hg18_v1_chr4_+_91035025_91035145	0.402564	SOX2.p2	AK125557|MMRN1|22915|multimerin 1	AK313566|MMRN1|22915|multimerin 1	BC063848|MMRN1|22915|multimerin 1	NM_007351|MMRN1|22915|multimerin 1	U27109|MMRN1|22915|multimerin 1
hg18_v1_chr10_-_61819493_61819493	0.397366	SOX2.p2	NM_020987|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	U13616|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)
hg18_v1_chr2_-_207291364_207291364	0.396803	SOX2.p2	DQ516347|DYTN|391475|dystrotelin	NM_001093730|DYTN|391475|dystrotelin
hg18_v1_chr1_+_116727514_116727514	0.39578	SOX2.p2	AK296362|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide	NM_001160234|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide
hg18_v1_chr18_-_27594696_27594840	0.395758	SOX2.p2	BC103999|MCART2|147407|mitochondrial carrier triple repeat 2	BC104000|MCART2|147407|mitochondrial carrier triple repeat 2	BC104001|MCART2|147407|mitochondrial carrier triple repeat 2	AK302337|MCART2|147407|mitochondrial carrier triple repeat 2	NM_001034172|MCART2|147407|mitochondrial carrier triple repeat 2
hg18_v1_chr9_+_102275310_102275340	0.39397	SOX2.p2	NM_003692|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1
hg18_v1_chr7_-_112514990_112515019	0.393	SOX2.p2	CR609708|GPR85|54329|G protein-coupled receptor 85	BC030577|GPR85|54329|G protein-coupled receptor 85
hg18_v1_chr17_+_71095733_71095807	0.390975	SOX2.p2	AF418286|MYO15B|80022|myosin XVB pseudogene	AF418287|MYO15B|80022|myosin XVB pseudogene	AF418288|MYO15B|80022|myosin XVB pseudogene	AF418289|MYO15B|80022|myosin XVB pseudogene	AF418290|MYO15B|80022|myosin XVB pseudogene	AF418291|MYO15B|80022|myosin XVB pseudogene
hg18_v1_chr19_-_11166186_11166265	0.39062	SOX2.p2	AY639929|KANK2|25959|KN motif and ankyrin repeat domains 2	NM_015493|KANK2|25959|KN motif and ankyrin repeat domains 2
hg18_v1_chrX_-_138114100_138114173	0.390392	SOX2.p2	AF108756|FGF13|2258|fibroblast growth factor 13	AK316170|FGF13|2258|fibroblast growth factor 13
hg18_v1_chr22_-_48865907_48865956	0.389406	SOX2.p2	NM_139202|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1	AK297341|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1
hg18_v1_chr7_+_50314801_50314998	0.388844	SOX2.p2	BC064594|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)	AY377974|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)	NM_006060|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)	U40462|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)
hg18_v1_chr12_-_107551783_107551800	0.387503	SOX2.p2	AK127638|SELPLG|6404|selectin P ligand	AK098315|SELPLG|6404|selectin P ligand	NM_003006|SELPLG|6404|selectin P ligand
hg18_v1_chr15_-_75259714_75259853	0.387292	SOX2.p2	AK091802|PEAK1|79834|NKF3 kinase family member
hg18_v1_chr6_+_44295219_44295449	0.383689	SOX2.p2	NM_001078174|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	NM_004955|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	BC095398|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	AK090491|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	AK304285|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	AB490708|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	U81375|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	AF079117|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1
hg18_v1_chr6_-_111995213_111995213	0.383166	SOX2.p2	NM_001164283|TRAF3IP2|10758|TRAF3 interacting protein 2
hg18_v1_chr7_-_112515068_112515084	0.382786	SOX2.p2	NM_001146265|GPR85|54329|G protein-coupled receptor 85	NM_018970|GPR85|54329|G protein-coupled receptor 85
hg18_v1_chr1_+_61642287_61642335	0.38143	SOX2.p2	AK024964|NFIA|4774|nuclear factor I/A
hg18_v1_chrX_-_19727828_19727839	0.380085	SOX2.p2	NM_001024666|SH3KBP1|30011|SH3-domain kinase binding protein 1
hg18_v1_chrX_-_138114817_138114833	0.377638	SOX2.p2	AF199613|FGF13|2258|fibroblast growth factor 13
hg18_v1_chr22_-_40666168_40666168	0.376398	SOX2.p2	EU035297|CENPM|79019|centromere protein M	NM_001110215|CENPM|79019|centromere protein M
hg18_v1_chr20_+_41976831_41976971	0.374623	SOX2.p2	NM_001098797|TOX2|84969|TOX high mobility group box family member 2
hg18_v1_chr21_+_29593607_29593607	0.373935	SOX2.p2	AF026199|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1	NM_206866|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1
hg18_v1_chr12_-_52939584_52939599	0.37011	SOX2.p2	BC006821|CBX5|23468|chromobox homolog 5	NM_001127322|CBX5|23468|chromobox homolog 5
hg18_v1_chr2_-_63518589_63518644	0.369651	SOX2.p2	BC093752|WDPCP|51057|WD repeat containing planar cell polarity effector	BC093754|WDPCP|51057|WD repeat containing planar cell polarity effector	BC143426|WDPCP|51057|WD repeat containing planar cell polarity effector	NM_001042692|WDPCP|51057|WD repeat containing planar cell polarity effector	AF131737|WDPCP|51057|WD repeat containing planar cell polarity effector
hg18_v1_chr6_+_116939500_116939528	0.36908	SOX2.p2	BC032556|FAM26E|254228|family with sequence similarity 26, member E	NM_153711|FAM26E|254228|family with sequence similarity 26, member E	AK094140|FAM26E|254228|family with sequence similarity 26, member E	AK315572|FAM26E|254228|family with sequence similarity 26, member E
hg18_v1_chr1_+_67404756_67404756	0.368473	SOX2.p2	AF461422|IL23R|149233|interleukin 23 receptor	NM_144701|IL23R|149233|interleukin 23 receptor
hg18_v1_chr3_-_127303080_127303089	0.368375	SOX2.p2	NM_001164475|SLC41A3|54946|solute carrier family 41, member 3	AK298070|SLC41A3|54946|solute carrier family 41, member 3
hg18_v1_chr10_+_97461525_97461525	0.365365	SOX2.p2	AJ133133|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	AJ133134|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001098175|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1
hg18_v1_chr12_-_107551744_107551780	0.363304	SOX2.p2	AK290395|SELPLG|6404|selectin P ligand	BC029782|SELPLG|6404|selectin P ligand
hg18_v1_chr6_-_46401363_46401489	0.363179	SOX2.p2	D83407|RCAN2|10231|regulator of calcineurin 2	BC038509|RCAN2|10231|regulator of calcineurin 2	NM_005822|RCAN2|10231|regulator of calcineurin 2
hg18_v1_chr4_-_83566045_83566089	0.362995	SOX2.p2	
hg18_v1_chr4_-_83566246_83566273	0.362558	SOX2.p2	X75683|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like
hg18_v1_chr11_-_6633427_6633651	0.362306	SOX2.p2	AB053446|DCHS1|8642|dachsous 1 (Drosophila)	NM_003737|DCHS1|8642|dachsous 1 (Drosophila)
hg18_v1_chr12_-_101398503_101398521	0.362261	SOX2.p2	AB209184|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	NM_000618|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	NM_001111283|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	NM_001111285|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg18_v1_chr17_-_60439764_60439772	0.360779	SOX2.p2	AK026902|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13
hg18_v1_chr22_-_20314366_20314434	0.360588	SOX2.p2	BC133043|YDJC|150223|YdjC homolog (bacterial)	BC133047|YDJC|150223|YdjC homolog (bacterial)
hg18_v1_chr12_-_52939636_52939640	0.359779	SOX2.p2	NM_001127321|CBX5|23468|chromobox homolog 5
hg18_v1_chr4_-_176970372_176970402	0.359693	SOX2.p2	DQ892372|GPM6A|2823|glycoprotein M6A	DQ895581|GPM6A|2823|glycoprotein M6A
hg18_v1_chr4_+_71713324_71713324	0.35952	SOX2.p2	AF125373|ENAM|10117|enamelin	NM_031889|ENAM|10117|enamelin
hg18_v1_chr11_-_5130174_5130174	0.357411	SOX2.p2	BC111691|OR52A1|23538|olfactory receptor, family 52, subfamily A, member 1	BC111722|OR52A1|23538|olfactory receptor, family 52, subfamily A, member 1	NM_012375|OR52A1|23538|olfactory receptor, family 52, subfamily A, member 1
hg18_v1_chr5_+_112101454_112101490	0.356556	SOX2.p2	NM_000038|APC|324|adenomatous polyposis coli	NM_001127510|APC|324|adenomatous polyposis coli	BC034955|APC|324|adenomatous polyposis coli	BC056268|APC|324|adenomatous polyposis coli	AB210001|APC|324|adenomatous polyposis coli
hg18_v1_chr6_+_21774624_21774653	0.356343	SOX2.p2	AK300802|FLJ22536|401237|hypothetical locus LOC401237	AK026189|FLJ22536|401237|hypothetical locus LOC401237
hg18_v1_chrX_+_15428820_15428960	0.354479	SOX2.p2	NM_203281|BMX|660|BMX non-receptor tyrosine kinase	AK291824|BMX|660|BMX non-receptor tyrosine kinase	AK313568|BMX|660|BMX non-receptor tyrosine kinase	X83107|BMX|660|BMX non-receptor tyrosine kinase
hg18_v1_chr12_-_101398451_101398453	0.354473	SOX2.p2	AK312231|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	X57025|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg18_v1_chr3_+_134239860_134239894	0.354314	SOX2.p2	NM_001136469|TMEM108|66000|transmembrane protein 108	NM_023943|TMEM108|66000|transmembrane protein 108
hg18_v1_chr1_+_154120170_154120225	0.350606	SOX2.p2	AK026178|SYT11|23208|synaptotagmin XI
hg18_v1_chr1_+_66570363_66570520	0.350187	SOX2.p2	NM_001037339|PDE4B|5142|phosphodiesterase 4B, cAMP-specific	M97515|PDE4B|5142|phosphodiesterase 4B, cAMP-specific	L12686|PDE4B|5142|phosphodiesterase 4B, cAMP-specific
hg18_v1_chr1_-_199259133_199259221	0.349608	SOX2.p2	AM177180|KIF21B|23046|kinesin family member 21B	BC137281|KIF21B|23046|kinesin family member 21B	BC144557|KIF21B|23046|kinesin family member 21B
hg18_v1_chr6_-_134415311_134415481	0.348875	SOX2.p2	AK226098|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12	BC070149|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12	AY046419|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12	AL833602|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12	AK122628|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12	BX648889|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12	NM_145176|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12
hg18_v1_chr9_-_116190038_116190184	0.348381	SOX2.p2	AY703041|AKNA|80709|AT-hook transcription factor	AY703042|AKNA|80709|AT-hook transcription factor	AK131082|AKNA|80709|AT-hook transcription factor	AK160382|AKNA|80709|AT-hook transcription factor	AB075848|AKNA|80709|AT-hook transcription factor
hg18_v1_chrX_+_65152004_65152029	0.347619	SOX2.p2	
hg18_v1_chr7_+_20336849_20336875	0.346165	SOX2.p2	AK295044|ITGB8|3696|integrin, beta 8
hg18_v1_chr6_+_88111289_88111289	0.34596	SOX2.p2	NM_001010868|C6orf163|206412|chromosome 6 open reading frame 163
hg18_v1_chr2_-_100088760_100089021	0.344937	SOX2.p2	AK297407|AFF3|3899|AF4/FMR2 family, member 3	AK092327|AFF3|3899|AF4/FMR2 family, member 3
hg18_v1_chr17_+_19930926_19930927	0.34326	SOX2.p2	AY816328|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1	AY816329|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1	NM_001033553|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1	NM_152904|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1	AB041533|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1
hg18_v1_chr12_-_101398429_101398436	0.342955	SOX2.p2	BC152321|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	M27544|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg18_v1_chr22_-_20314274_20314356	0.341658	SOX2.p2	CR596616|YDJC|150223|YdjC homolog (bacterial)	CR597037|YDJC|150223|YdjC homolog (bacterial)	BC064568|YDJC|150223|YdjC homolog (bacterial)	CR590781|YDJC|150223|YdjC homolog (bacterial)	CR613078|YDJC|150223|YdjC homolog (bacterial)	CR614195|YDJC|150223|YdjC homolog (bacterial)	CR618402|YDJC|150223|YdjC homolog (bacterial)	BC053663|YDJC|150223|YdjC homolog (bacterial)	BC017281|YDJC|150223|YdjC homolog (bacterial)	CR620409|YDJC|150223|YdjC homolog (bacterial)	CR624561|YDJC|150223|YdjC homolog (bacterial)	BC110075|YDJC|150223|YdjC homolog (bacterial)	BC110799|YDJC|150223|YdjC homolog (bacterial)	CR613432|YDJC|150223|YdjC homolog (bacterial)	BC057814|YDJC|150223|YdjC homolog (bacterial)	NM_001017964|YDJC|150223|YdjC homolog (bacterial)	CR600451|YDJC|150223|YdjC homolog (bacterial)	BC096754|YDJC|150223|YdjC homolog (bacterial)
hg18_v1_chr12_-_101398470_101398474	0.341494	SOX2.p2	M11568|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg18_v1_chr11_-_118739838_118740067	0.340518	SOX2.p2	AF079564|USP2|9099|ubiquitin specific peptidase 2	AK301805|USP2|9099|ubiquitin specific peptidase 2	AK292255|USP2|9099|ubiquitin specific peptidase 2
hg18_v1_chr6_-_130578110_130578186	0.340503	SOX2.p2	BC029851|SAMD3|154075|sterile alpha motif domain containing 3	BC119757|SAMD3|154075|sterile alpha motif domain containing 3	BC119758|SAMD3|154075|sterile alpha motif domain containing 3	BC127653|SAMD3|154075|sterile alpha motif domain containing 3	BC127654|SAMD3|154075|sterile alpha motif domain containing 3	NM_152552|SAMD3|154075|sterile alpha motif domain containing 3
hg18_v1_chrX_+_77889861_77889868	0.338623	SOX2.p2	NM_005296|LPAR4|2846|lysophosphatidic acid receptor 4	AK314134|LPAR4|2846|lysophosphatidic acid receptor 4
hg18_v1_chr13_-_22905822_22905859	0.338491	SOX2.p2	NM_014363|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)
hg18_v1_chr17_+_18971506_18971506	0.338178	SOX2.p2	BC157869|GRAPL|400581|GRB2-related adaptor protein-like	NM_001129778|GRAPL|400581|GRB2-related adaptor protein-like
hg18_v1_chr5_-_34078991_34079127	0.337362	SOX2.p2	EU399231|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	EU399232|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	BC112925|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	AF329837|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	BC120990|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	AF326976|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	AY358388|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	NM_030945|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	NM_181435|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	AK075533|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	BX640995|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	AK315921|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	AK295968|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3
hg18_v1_chr10_+_80672842_80673430	0.337118	SOX2.p2	AB033050|ZMIZ1|57178|zinc finger, MIZ-type containing 1
hg18_v1_chr5_+_88220846_88220907	0.335583	SOX2.p2	
hg18_v1_chr10_-_98326435_98326563	0.334216	SOX2.p2	BC020959|TM9SF3|56889|transmembrane 9 superfamily member 3	AK027788|TM9SF3|56889|transmembrane 9 superfamily member 3	AY358819|TM9SF3|56889|transmembrane 9 superfamily member 3
hg18_v1_chr11_-_71458739_71458785	0.33357	SOX2.p2	BC036808|NUMA1|4926|nuclear mitotic apparatus protein 1
hg18_v1_chr11_-_64403712_64403762	0.333323	SOX2.p2	AK302930|EHD1|10938|EH-domain containing 1	AK097842|EHD1|10938|EH-domain containing 1
hg18_v1_chr3_+_179736917_179736917	0.333133	SOX2.p2	BC017825|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2	NM_181361|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2
hg18_v1_chr1_-_219977424_219977424	0.332363	SOX2.p2	NM_144728|DUSP10|11221|dual specificity phosphatase 10
hg18_v1_chrX_+_12904207_12904321	0.332041	SOX2.p2	BC104464|TMSB4X|7114|thymosin beta 4, X-linked	BC104465|TMSB4X|7114|thymosin beta 4, X-linked	CR605307|TMSL3|7117|thymosin-like 3	BT007090|TMSB4X|7114|thymosin beta 4, X-linked	X02493|TMSB4X|7114|thymosin beta 4, X-linked
hg18_v1_chr12_-_107551694_107551713	0.331577	SOX2.p2	AK225644|SELPLG|6404|selectin P ligand	U02297|SELPLG|6404|selectin P ligand	AK295238|SELPLG|6404|selectin P ligand
hg18_v1_chr5_-_33927724_33927880	0.331315	SOX2.p2	BC139900|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12	BC131733|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12	AY358745|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12	BC058841|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12	NM_030955|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12
hg18_v1_chr11_-_118740069_118740116	0.33116	SOX2.p2	AF440755|USP2|9099|ubiquitin specific peptidase 2	NM_171997|USP2|9099|ubiquitin specific peptidase 2
hg18_v1_chr5_+_15553288_15553310	0.330882	SOX2.p2	AB020647|FBXL7|23194|F-box and leucine-rich repeat protein 7	NM_012304|FBXL7|23194|F-box and leucine-rich repeat protein 7
hg18_v1_chr12_-_101398288_101398403	0.329596	SOX2.p2	BC148266|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	CR541861|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	X56773|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	X56774|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	M29644|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	X00173|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg18_v1_chr3_+_134239906_134239942	0.329581	SOX2.p2	AY358381|TMEM108|66000|transmembrane protein 108	BC000568|TMEM108|66000|transmembrane protein 108
hg18_v1_chrX_-_138742050_138742112	0.329343	SOX2.p2	BC132728|ATP11C|286410|ATPase, class VI, type 11C	BC132730|ATP11C|286410|ATPase, class VI, type 11C	AJ580093|ATP11C|286410|ATPase, class VI, type 11C	AJ580094|ATP11C|286410|ATPase, class VI, type 11C	NM_001010986|ATP11C|286410|ATPase, class VI, type 11C	NM_173694|ATP11C|286410|ATPase, class VI, type 11C
hg18_v1_chr1_-_52791309_52791374	0.327338	SOX2.p2	BC012047|ZCCHC11|23318|zinc finger, CCHC domain containing 11	BC018753|ZCCHC11|23318|zinc finger, CCHC domain containing 11	BC035820|ZCCHC11|23318|zinc finger, CCHC domain containing 11	NM_001009881|ZCCHC11|23318|zinc finger, CCHC domain containing 11	NM_015269|ZCCHC11|23318|zinc finger, CCHC domain containing 11	AK307579|ZCCHC11|23318|zinc finger, CCHC domain containing 11	AK095733|ZCCHC11|23318|zinc finger, CCHC domain containing 11
hg18_v1_chr13_-_32678142_32678186	0.325988	SOX2.p2	AL049801|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	AY082591|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	AK091804|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	NM_052851|STARD13|90627|StAR-related lipid transfer (START) domain containing 13
hg18_v1_chr9_-_122728993_122728993	0.325891	SOX2.p2	AK090468|TRAF1|7185|TNF receptor-associated factor 1	NM_005658|TRAF1|7185|TNF receptor-associated factor 1
hg18_v1_chr7_+_150321771_150321824	0.324904	SOX2.p2	AK292928|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	AK302686|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	M93718|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	AK315213|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	AK223636|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	AK225827|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	M95296|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	BC069465|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	AF400594|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	DQ256129|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	DQ256130|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	DQ256131|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	NM_001160109|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	NM_001160110|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	NM_001160111|NOS3|4846|nitric oxide synthase 3 (endothelial cell)
hg18_v1_chr11_+_10439253_10439262	0.32374	SOX2.p2	NM_001172430|AMPD3|272|adenosine monophosphate deaminase 3	AK302970|AMPD3|272|adenosine monophosphate deaminase 3
hg18_v1_chr5_+_140730014_140730145	0.323034	SOX2.p2	BC150172|PCDHGB3|56102|protocadherin gamma subfamily B, 3	AF152332|PCDHGB3|56102|protocadherin gamma subfamily B, 3	AF152519|PCDHGB3|56102|protocadherin gamma subfamily B, 3	NM_018924|PCDHGB3|56102|protocadherin gamma subfamily B, 3	NM_032097|PCDHGB3|56102|protocadherin gamma subfamily B, 3
hg18_v1_chr5_+_15553736_15553760	0.323004	SOX2.p2	BC075061|FBXL7|23194|F-box and leucine-rich repeat protein 7
hg18_v1_chr19_-_55008172_55008419	0.32281	SOX2.p2	CR592794|FUZ|80199|fuzzy homolog (Drosophila)	BC010092|FUZ|80199|fuzzy homolog (Drosophila)	CR609003|FUZ|80199|fuzzy homolog (Drosophila)	AK057964|FUZ|80199|fuzzy homolog (Drosophila)	BC004445|FUZ|80199|fuzzy homolog (Drosophila)	BC016793|FUZ|80199|fuzzy homolog (Drosophila)	CR613541|FUZ|80199|fuzzy homolog (Drosophila)	CR616619|FUZ|80199|fuzzy homolog (Drosophila)	CR621655|FUZ|80199|fuzzy homolog (Drosophila)	CR595499|FUZ|80199|fuzzy homolog (Drosophila)	CR607071|FUZ|80199|fuzzy homolog (Drosophila)	AK026341|FUZ|80199|fuzzy homolog (Drosophila)	AK315445|FUZ|80199|fuzzy homolog (Drosophila)	AK295072|FUZ|80199|fuzzy homolog (Drosophila)	NM_001171937|FUZ|80199|fuzzy homolog (Drosophila)	NM_025129|FUZ|80199|fuzzy homolog (Drosophila)
hg18_v1_chr15_+_72397934_72397983	0.322603	SOX2.p2	AK290709|CCDC33|80125|coiled-coil domain containing 33	AK310852|CCDC33|80125|coiled-coil domain containing 33	AK026821|CCDC33|80125|coiled-coil domain containing 33	NM_182791|CCDC33|80125|coiled-coil domain containing 33	BC025689|CCDC33|80125|coiled-coil domain containing 33
hg18_v1_chr7_+_18501876_18501973	0.322131	SOX2.p2	BC150328|HDAC9|9734|histone deacetylase 9	AB018287|HDAC9|9734|histone deacetylase 9	AJ459808|HDAC9|9734|histone deacetylase 9	BC152405|HDAC9|9734|histone deacetylase 9	NM_014707|HDAC9|9734|histone deacetylase 9	NM_178423|HDAC9|9734|histone deacetylase 9	AK297404|HDAC9|9734|histone deacetylase 9	AK316109|HDAC9|9734|histone deacetylase 9	AY429540|HDAC9|9734|histone deacetylase 9
hg18_v1_chr11_-_16380967_16380988	0.321993	SOX2.p2	AL136780|SOX6|55553|SRY (sex determining region Y)-box 6	AK310506|SOX6|55553|SRY (sex determining region Y)-box 6	BC047064|SOX6|55553|SRY (sex determining region Y)-box 6	NM_001145819|SOX6|55553|SRY (sex determining region Y)-box 6	NM_017508|SOX6|55553|SRY (sex determining region Y)-box 6
hg18_v1_chr9_+_71009746_71009897	0.320116	SOX2.p2	NM_001170415|TJP2|9414|tight junction protein 2 (zona occludens 2)	AK302483|TJP2|9414|tight junction protein 2 (zona occludens 2)	AK295034|TJP2|9414|tight junction protein 2 (zona occludens 2)	NM_001170416|TJP2|9414|tight junction protein 2 (zona occludens 2)
hg18_v1_chr22_-_17799177_17799214	0.319668	SOX2.p2	BC039835|HIRA|7290|HIR histone cell cycle regulation defective homolog A (S. cerevisiae)
hg18_v1_chr6_+_106653429_106653566	0.319053	SOX2.p2	AK301341|PRDM1|639|PR domain containing 1, with ZNF domain	AY198415|PRDM1|639|PR domain containing 1, with ZNF domain	NM_182907|PRDM1|639|PR domain containing 1, with ZNF domain	BC103832|PRDM1|639|PR domain containing 1, with ZNF domain	BC103833|PRDM1|639|PR domain containing 1, with ZNF domain	BC103834|PRDM1|639|PR domain containing 1, with ZNF domain	BC103835|PRDM1|639|PR domain containing 1, with ZNF domain
hg18_v1_chr13_-_74799898_74799949	0.318961	SOX2.p2	CR749622|TBC1D4|9882|TBC1 domain family, member 4
hg18_v1_chr12_-_69434330_69434503	0.318858	SOX2.p2	BC119777|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	BC122866|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	BC110900|PTPRR|5801|protein tyrosine phosphatase, receptor type, R
hg18_v1_chr22_+_36422940_36422956	0.317189	SOX2.p2	NM_001039141|TRIOBP|11078|TRIO and F-actin binding protein	AK096634|TRIOBP|11078|TRIO and F-actin binding protein
hg18_v1_chr1_-_115039614_115039761	0.316162	SOX2.p2	AK291349|AMPD1|270|adenosine monophosphate deaminase 1	AK314252|AMPD1|270|adenosine monophosphate deaminase 1	BC056678|AMPD1|270|adenosine monophosphate deaminase 1	M60092|AMPD1|270|adenosine monophosphate deaminase 1	AK097077|AMPD1|270|adenosine monophosphate deaminase 1	NM_000036|AMPD1|270|adenosine monophosphate deaminase 1	NM_001172626|AMPD1|270|adenosine monophosphate deaminase 1
hg18_v1_chr5_+_102493155_102493192	0.315932	SOX2.p2	BC024591|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2	NM_015216|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2
hg18_v1_chr2_-_156897286_156897532	0.314987	SOX2.p2	S77154|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	X75918|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	BC066890|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	BC009288|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	AK299439|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	AK291456|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	AK223625|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	AK309786|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	NM_006186|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2
hg18_v1_chrX_-_135790509_135790529	0.314143	SOX2.p2	CR597391|RBMX|27316|RNA binding motif protein, X-linked
hg18_v1_chr12_-_94135154_94135581	0.31388	SOX2.p2	BC125225|FGD6|55785|FYVE, RhoGEF and PH domain containing 6	BC125226|FGD6|55785|FYVE, RhoGEF and PH domain containing 6	BX538322|FGD6|55785|FYVE, RhoGEF and PH domain containing 6	AK124904|FGD6|55785|FYVE, RhoGEF and PH domain containing 6	NM_018351|FGD6|55785|FYVE, RhoGEF and PH domain containing 6
hg18_v1_chr20_+_30061905_30061913	0.313399	SOX2.p2	NM_080625|C20orf160|140706|chromosome 20 open reading frame 160	AK057090|C20orf160|140706|chromosome 20 open reading frame 160	BC030254|C20orf160|140706|chromosome 20 open reading frame 160
hg18_v1_chr5_-_141318810_141318810	0.311303	SOX2.p2	AF240635|PCDH12|51294|protocadherin 12	NM_016580|PCDH12|51294|protocadherin 12
hg18_v1_chr9_-_21472311_21472311	0.309438	SOX2.p2	AY358570|IFNE|338376|interferon, epsilon	NM_176891|IFNE|338376|interferon, epsilon
hg18_v1_chr3_-_197726587_197726633	0.309127	SOX2.p2	AK291522|C3orf43|255798|chromosome 3 open reading frame 43	BC118556|C3orf43|255798|chromosome 3 open reading frame 43	BC118636|C3orf43|255798|chromosome 3 open reading frame 43	AL833140|C3orf43|255798|chromosome 3 open reading frame 43	AL833443|C3orf43|255798|chromosome 3 open reading frame 43	AK123917|C3orf43|255798|chromosome 3 open reading frame 43	NM_001077657|C3orf43|255798|chromosome 3 open reading frame 43
hg18_v1_chr22_+_38627031_38627109	0.309062	SOX2.p2	AY069959|GRAP2|9402|GRB2-related adaptor protein 2	NM_004810|GRAP2|9402|GRB2-related adaptor protein 2	AK303332|GRAP2|9402|GRB2-related adaptor protein 2	AK303512|GRAP2|9402|GRB2-related adaptor protein 2	AF236119|GRAP2|9402|GRB2-related adaptor protein 2	CR604186|GRAP2|9402|GRB2-related adaptor protein 2	AJ011736|GRAP2|9402|GRB2-related adaptor protein 2	BC025692|GRAP2|9402|GRB2-related adaptor protein 2	AF042380|GRAP2|9402|GRB2-related adaptor protein 2	AF102694|GRAP2|9402|GRB2-related adaptor protein 2
hg18_v1_chr11_+_65164767_65164895	0.309024	SOX2.p2	AK310068|SIPA1|6494|signal-induced proliferation-associated 1
hg18_v1_chr1_-_153109349_153109391	0.30859	SOX2.p2	AF031815|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	Y08263|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	AJ251016|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	AK310077|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	NM_002249|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3
hg18_v1_chr6_-_46401174_46401352	0.307555	SOX2.p2	DQ891658|RCAN2|10231|regulator of calcineurin 2	DQ894845|RCAN2|10231|regulator of calcineurin 2	AK312392|RCAN2|10231|regulator of calcineurin 2	CR604948|RCAN2|10231|regulator of calcineurin 2
hg18_v1_chr7_+_28418668_28418668	0.307053	SOX2.p2	L05515|CREB5|9586|cAMP responsive element binding protein 5	NM_182898|CREB5|9586|cAMP responsive element binding protein 5
hg18_v1_chr5_+_36642213_36642213	0.306034	SOX2.p2	NM_001166696|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	NM_004172|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3
hg18_v1_chr14_-_30927931_30927931	0.305935	SOX2.p2	BC045764|HEATR5A|25938|HEAT repeat containing 5A	NM_015473|HEATR5A|25938|HEAT repeat containing 5A
hg18_v1_chr1_+_242281175_242281183	0.305352	SOX2.p2	NM_205768|ZNF238|10472|zinc finger protein 238
hg18_v1_chr1_+_198975227_198975361	0.304464	SOX2.p2	AK095640|CAMSAP1L1|23271|calmodulin regulated spectrin-associated protein 1-like 1	NM_203459|CAMSAP1L1|23271|calmodulin regulated spectrin-associated protein 1-like 1
hg18_v1_chr22_-_48865797_48865842	0.303158	SOX2.p2	AK294048|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1
hg18_v1_chr2_-_136590210_136590327	0.302242	SOX2.p2	NM_001008540|CXCR4|7852|chemokine (C-X-C motif) receptor 4
hg18_v1_chr12_-_10479810_10479882	0.302033	SOX2.p2	BC106069|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2	AK295525|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2	AF260134|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2	AF350017|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3	NM_002260|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2	X54869|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2	Y13055|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2	AF461157|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3	BC093644|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2	BC112039|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2
hg18_v1_chr22_-_17892859_17892893	0.301739	SOX2.p2	AK092561|CLDN5|7122|claudin 5	NM_001130861|CLDN5|7122|claudin 5	NM_003277|CLDN5|7122|claudin 5	CR626038|CLDN5|7122|claudin 5
hg18_v1_chr5_-_138238891_138238934	0.301343	SOX2.p2	AK309790|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2	AB007876|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2	BC028172|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2	AK291064|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2	AK297332|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa
hg18_v1_chr3_-_120761092_120761170	0.300896	SOX2.p2	M27533|CD80|941|CD80 molecule	BC042665|CD80|941|CD80 molecule	AK292129|CD80|941|CD80 molecule	NM_005191|CD80|941|CD80 molecule
hg18_v1_chr7_+_5598964_5598967	0.299835	SOX2.p2	AK095254|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	AK316607|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)
hg18_v1_chr3_+_66527586_66527713	0.298561	SOX2.p2	
hg18_v1_chr1_-_153107084_153107166	0.298504	SOX2.p2	
hg18_v1_chr16_-_4836198_4836211	0.298003	SOX2.p2	BC003693|GLYR1|84656|glyoxylate reductase 1 homolog (Arabidopsis)
hg18_v1_chrX_+_41433169_41433254	0.297926	SOX2.p2	AK027780|GPR34|2857|G protein-coupled receptor 34	NM_001097579|GPR34|2857|G protein-coupled receptor 34	NM_005300|GPR34|2857|G protein-coupled receptor 34	DQ106398|GPR34|2857|G protein-coupled receptor 34	CR603494|GPR34|2857|G protein-coupled receptor 34	DQ106400|GPR34|2857|G protein-coupled receptor 34	BC020678|GPR34|2857|G protein-coupled receptor 34	DQ106399|GPR34|2857|G protein-coupled receptor 34	CR609581|GPR34|2857|G protein-coupled receptor 34	DQ106401|GPR34|2857|G protein-coupled receptor 34	DQ106402|GPR34|2857|G protein-coupled receptor 34	AK075217|GPR34|2857|G protein-coupled receptor 34
hg18_v1_chr4_-_24195113_24195235	0.296431	SOX2.p2	AF279891|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15
hg18_v1_chr11_-_60880799_60880936	0.296326	SOX2.p2	AK225754|CYBASC3|220002|cytochrome b, ascorbate dependent 3	AK310167|CYBASC3|220002|cytochrome b, ascorbate dependent 3	NM_001161452|CYBASC3|220002|cytochrome b, ascorbate dependent 3
hg18_v1_chr6_-_11887265_11887265	0.296092	SOX2.p2	NM_001143948|C6orf105|84830|chromosome 6 open reading frame 105	NM_032744|C6orf105|84830|chromosome 6 open reading frame 105
hg18_v1_chr1_+_84402962_84402974	0.296011	SOX2.p2	BX647515|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	AB209189|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta
hg18_v1_chr10_+_17311242_17311281	0.295143	SOX2.p2	CR593122|VIM|7431|vimentin	CR593139|VIM|7431|vimentin	CR593157|VIM|7431|vimentin	CR595631|VIM|7431|vimentin	CR596714|VIM|7431|vimentin	CR597938|VIM|7431|vimentin	CR599707|VIM|7431|vimentin	CR601844|VIM|7431|vimentin	CR602002|VIM|7431|vimentin	CR602499|VIM|7431|vimentin	CR602711|VIM|7431|vimentin	CR604958|VIM|7431|vimentin	CR605908|VIM|7431|vimentin	CR608479|VIM|7431|vimentin	CR610054|VIM|7431|vimentin	CR611833|VIM|7431|vimentin	CR615569|VIM|7431|vimentin	CR617011|VIM|7431|vimentin	CR617845|VIM|7431|vimentin	CR618852|VIM|7431|vimentin	CR620637|VIM|7431|vimentin	CR620780|VIM|7431|vimentin	CR621379|VIM|7431|vimentin	CR624853|VIM|7431|vimentin	CR593764|VIM|7431|vimentin	CR595804|VIM|7431|vimentin	CR604328|VIM|7431|vimentin	CR604633|VIM|7431|vimentin	CR609435|VIM|7431|vimentin
hg18_v1_chr10_+_17311282_17311282	0.294505	SOX2.p2	AK056766|VIM|7431|vimentin	AK091813|VIM|7431|vimentin	AK097336|VIM|7431|vimentin	AK098444|VIM|7431|vimentin	AK222507|VIM|7431|vimentin	AK222602|VIM|7431|vimentin
hg18_v1_chr1_-_160648429_160648551	0.294445	SOX2.p2	AF256653|SH2D1B|117157|SH2 domain containing 1B	AF403479|SH2D1B|117157|SH2 domain containing 1B	DQ891975|SH2D1B|117157|SH2 domain containing 1B	DQ895166|SH2D1B|117157|SH2 domain containing 1B	AK097162|SH2D1B|117157|SH2 domain containing 1B	AK314743|SH2D1B|117157|SH2 domain containing 1B	AF484964|SH2D1B|117157|SH2 domain containing 1B	BC066595|SH2D1B|117157|SH2 domain containing 1B	BC022407|SH2D1B|117157|SH2 domain containing 1B	NM_053282|SH2D1B|117157|SH2 domain containing 1B
hg18_v1_chr4_+_39874921_39875152	0.294411	SOX2.p2	NM_004310|RHOH|399|ras homolog gene family, member H	CR619539|RHOH|399|ras homolog gene family, member H	Z35227|RHOH|399|ras homolog gene family, member H	CR607001|RHOH|399|ras homolog gene family, member H	BC014261|RHOH|399|ras homolog gene family, member H	AK313744|RHOH|399|ras homolog gene family, member H
hg18_v1_chr1_+_203106600_203106612	0.294307	SOX2.p2	AK308686|NFASC|23114|neurofascin
hg18_v1_chr17_-_30909219_30909222	0.294021	SOX2.p2	BC140847|SLFN14|342618|schlafen family member 14	BC157877|SLFN14|342618|schlafen family member 14	BC157879|SLFN14|342618|schlafen family member 14	NM_001129820|SLFN14|342618|schlafen family member 14
hg18_v1_chrX_-_138114846_138114881	0.293902	SOX2.p2	AK303685|FGF13|2258|fibroblast growth factor 13	NM_001139498|FGF13|2258|fibroblast growth factor 13	NM_001139500|FGF13|2258|fibroblast growth factor 13	NM_001139501|FGF13|2258|fibroblast growth factor 13	AK297545|FGF13|2258|fibroblast growth factor 13
hg18_v1_chr1_-_158161924_158161963	0.293383	SOX2.p2	CR621820|TAGLN2|8407|transgelin 2	CR601283|TAGLN2|8407|transgelin 2
hg18_v1_chrX_-_135790595_135790608	0.291736	SOX2.p2	NM_001164803|RBMX|27316|RNA binding motif protein, X-linked	NM_002139|RBMX|27316|RNA binding motif protein, X-linked
hg18_v1_chr5_-_138238953_138238963	0.290761	SOX2.p2	NM_015564|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2
hg18_v1_chr1_-_158161898_158161900	0.290068	SOX2.p2	CR623657|TAGLN2|8407|transgelin 2	CR609777|TAGLN2|8407|transgelin 2	CR621369|TAGLN2|8407|transgelin 2
hg18_v1_chr3_+_153469421_153469444	0.289635	SOX2.p2	BC050535|MBNL1|4154|muscleblind-like (Drosophila)	BC043493|MBNL1|4154|muscleblind-like (Drosophila)
hg18_v1_chr5_+_15553539_15553549	0.28902	SOX2.p2	BC136424|FBXL7|23194|F-box and leucine-rich repeat protein 7
hg18_v1_chr1_+_111215343_111215361	0.287358	SOX2.p2	NM_001040033|CD53|963|CD53 molecule	BC035456|CD53|963|CD53 molecule
hg18_v1_chr12_-_69434650_69434805	0.286966	SOX2.p2	BC092469|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	U77916|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	BX571751|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	AK304457|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	AK304672|PTPRR|5801|protein tyrosine phosphatase, receptor type, R
hg18_v1_chr12_-_69434598_69434637	0.28639	SOX2.p2	X82635|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	CR625935|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	NM_130846|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	U77917|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	BC072386|PTPRR|5801|protein tyrosine phosphatase, receptor type, R
hg18_v1_chr10_+_17311283_17311303	0.285464	SOX2.p2	X16478|VIM|7431|vimentin	AK222482|VIM|7431|vimentin	CR614482|VIM|7431|vimentin	CR622549|VIM|7431|vimentin	CR612980|VIM|7431|vimentin	CR590855|VIM|7431|vimentin	CR600582|VIM|7431|vimentin	CR600607|VIM|7431|vimentin	CR621958|VIM|7431|vimentin	CR622001|VIM|7431|vimentin	CR623317|VIM|7431|vimentin	CR591166|VIM|7431|vimentin	CR596422|VIM|7431|vimentin	CR601396|VIM|7431|vimentin	CR606048|VIM|7431|vimentin	CR608699|VIM|7431|vimentin	CR619643|VIM|7431|vimentin	CR622265|VIM|7431|vimentin	AF328728|VIM|7431|vimentin	CR598442|VIM|7431|vimentin	CR620869|VIM|7431|vimentin	CR616523|VIM|7431|vimentin	BC000163|VIM|7431|vimentin	BC030573|VIM|7431|vimentin
hg18_v1_chrX_-_135790535_135790588	0.28461	SOX2.p2	CR607658|RBMX|27316|RNA binding motif protein, X-linked	BC006550|RBMX|27316|RNA binding motif protein, X-linked	BC007435|RBMX|27316|RNA binding motif protein, X-linked	CR616933|RBMX|27316|RNA binding motif protein, X-linked	BX647131|RBMX|27316|RNA binding motif protein, X-linked	AK091520|RBMX|27316|RNA binding motif protein, X-linked	AK096015|RBMX|27316|RNA binding motif protein, X-linked	AK304573|RBMX|27316|RNA binding motif protein, X-linked	AK304868|RBMX|27316|RNA binding motif protein, X-linked	AK309911|RBMX|27316|RNA binding motif protein, X-linked	CR599705|RBMX|27316|RNA binding motif protein, X-linked
hg18_v1_chr1_-_158161877_158161896	0.284224	SOX2.p2	BC009357|TAGLN2|8407|transgelin 2	CR607405|TAGLN2|8407|transgelin 2	CR609407|TAGLN2|8407|transgelin 2	CR612553|TAGLN2|8407|transgelin 2	CR624984|TAGLN2|8407|transgelin 2	CR592851|TAGLN2|8407|transgelin 2	CR622397|TAGLN2|8407|transgelin 2	CR626596|TAGLN2|8407|transgelin 2
hg18_v1_chr5_-_88235624_88235677	0.283375	SOX2.p2	AL833268|MEF2C|4208|myocyte enhancer factor 2C	AL833274|MEF2C|4208|myocyte enhancer factor 2C	NM_001131005|MEF2C|4208|myocyte enhancer factor 2C	NM_001193347|MEF2C|4208|myocyte enhancer factor 2C
hg18_v1_chr10_-_88707299_88707404	0.282141	SOX2.p2	BC072456|MMRN2|79812|multimerin 2	AK304727|MMRN2|79812|multimerin 2	AK023527|MMRN2|79812|multimerin 2	AK293822|MMRN2|79812|multimerin 2	BC094744|MMRN2|79812|multimerin 2	BC064415|MMRN2|79812|multimerin 2	AK308401|MMRN2|79812|multimerin 2	NM_024756|MMRN2|79812|multimerin 2
hg18_v1_chr7_+_156128431_156128481	0.281426	SOX2.p2	NM_001184997|RNF32|140545|ring finger protein 32	AF325690|RNF32|140545|ring finger protein 32
hg18_v1_chr3_+_112743729_112743785	0.281374	SOX2.p2	AK290719|CD96|10225|CD96 molecule	AK315237|CD96|10225|CD96 molecule	AL833681|CD96|10225|CD96 molecule
hg18_v1_chr5_-_138238877_138238886	0.281281	SOX2.p2	CR600503|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2
hg18_v1_chr1_-_158161902_158161920	0.279949	SOX2.p2	CR604476|TAGLN2|8407|transgelin 2	CR608575|TAGLN2|8407|transgelin 2	CR610006|TAGLN2|8407|transgelin 2	CR613520|TAGLN2|8407|transgelin 2	BC002616|TAGLN2|8407|transgelin 2	CR592747|TAGLN2|8407|transgelin 2	CR607855|TAGLN2|8407|transgelin 2	CR608199|TAGLN2|8407|transgelin 2	CR608276|TAGLN2|8407|transgelin 2	CR609748|TAGLN2|8407|transgelin 2	CR613098|TAGLN2|8407|transgelin 2	CR618095|TAGLN2|8407|transgelin 2	CR620277|TAGLN2|8407|transgelin 2	CR599010|TAGLN2|8407|transgelin 2	CR620855|TAGLN2|8407|transgelin 2	CR624026|TAGLN2|8407|transgelin 2	CR618563|TAGLN2|8407|transgelin 2	CR602105|TAGLN2|8407|transgelin 2	CR614100|TAGLN2|8407|transgelin 2	D21261|TAGLN2|8407|transgelin 2	NM_003564|TAGLN2|8407|transgelin 2	CR590142|TAGLN2|8407|transgelin 2	AK291562|TAGLN2|8407|transgelin 2	AK298654|TAGLN2|8407|transgelin 2
hg18_v1_chr4_+_38740246_38740246	0.279312	SOX2.p2	AK289785|KLHL5|51088|kelch-like 5 (Drosophila)	NM_015990|KLHL5|51088|kelch-like 5 (Drosophila)	NM_199039|KLHL5|51088|kelch-like 5 (Drosophila)
hg18_v1_chr4_-_109308893_109309603	0.279083	SOX2.p2	AF288571|LEF1|51176|lymphoid enhancer-binding factor 1	AK225772|LEF1|51176|lymphoid enhancer-binding factor 1	NM_001130713|LEF1|51176|lymphoid enhancer-binding factor 1	NM_001130714|LEF1|51176|lymphoid enhancer-binding factor 1	NM_016269|LEF1|51176|lymphoid enhancer-binding factor 1
hg18_v1_chr7_-_86526880_86526949	0.278249	SOX2.p2	NM_001142749|KIAA1324L|222223|KIAA1324-like
hg18_v1_chr7_+_104539548_104539681	0.278163	SOX2.p2	AY222296|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)	AY438698|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)
hg18_v1_chr15_+_49760841_49761005	0.277786	SOX2.p2	AF453583|SCG3|29106|secretogranin III	NM_001165257|SCG3|29106|secretogranin III	NM_013243|SCG3|29106|secretogranin III	AF078851|SCG3|29106|secretogranin III	AY359093|SCG3|29106|secretogranin III	AK075314|SCG3|29106|secretogranin III	AK296466|SCG3|29106|secretogranin III	AK290175|SCG3|29106|secretogranin III
hg18_v1_chr8_-_93144366_93144366	0.27733	SOX2.p2	D43638|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_004349|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg18_v1_chr11_-_57173823_57173992	0.277274	SOX2.p2	BC029228|YPEL4|219539|yippee-like 4 (Drosophila)	BC104781|YPEL4|219539|yippee-like 4 (Drosophila)	BC112119|YPEL4|219539|yippee-like 4 (Drosophila)	BC064995|YPEL4|219539|yippee-like 4 (Drosophila)	AB098738|YPEL4|219539|yippee-like 4 (Drosophila)	AK054775|YPEL4|219539|yippee-like 4 (Drosophila)	AK124577|YPEL4|219539|yippee-like 4 (Drosophila)	NM_145008|YPEL4|219539|yippee-like 4 (Drosophila)
hg18_v1_chr10_+_97505398_97505662	0.276815	SOX2.p2	NM_001164178|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001164181|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	AK301459|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	AK298648|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	AK098278|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001164179|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001164182|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001164183|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001776|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1
hg18_v1_chr7_+_63410620_63410620	0.276455	SOX2.p2	NM_001170905|ZNF736|728927|zinc finger protein 736
hg18_v1_chr17_+_59875623_59875900	0.275791	SOX2.p2	AK300768|C17orf60|284021|chromosome 17 open reading frame 60	NM_001085423|C17orf60|284021|chromosome 17 open reading frame 60	BC018972|C17orf60|284021|chromosome 17 open reading frame 60	BC130406|C17orf60|284021|chromosome 17 open reading frame 60	BC136594|C17orf60|284021|chromosome 17 open reading frame 60	BC144272|C17orf60|284021|chromosome 17 open reading frame 60	AB542950|C17orf60|284021|chromosome 17 open reading frame 60	AB542951|C17orf60|284021|chromosome 17 open reading frame 60	BC053534|C17orf60|284021|chromosome 17 open reading frame 60
hg18_v1_chr3_-_69254226_69254435	0.274506	SOX2.p2	AM393202|LMOD3|56203|leiomodin 3 (fetal)	BC121019|LMOD3|56203|leiomodin 3 (fetal)	BC017925|LMOD3|56203|leiomodin 3 (fetal)	AL832033|LMOD3|56203|leiomodin 3 (fetal)	AK300096|LMOD3|56203|leiomodin 3 (fetal)	AL832709|LMOD3|56203|leiomodin 3 (fetal)	BC039202|LMOD3|56203|leiomodin 3 (fetal)	NM_198271|LMOD3|56203|leiomodin 3 (fetal)
hg18_v1_chr10_-_50066386_50066479	0.274367	SOX2.p2	DQ884399|C10orf128|170371|chromosome 10 open reading frame 128	BC047724|C10orf128|170371|chromosome 10 open reading frame 128	BC104438|C10orf128|170371|chromosome 10 open reading frame 128	BC104439|C10orf128|170371|chromosome 10 open reading frame 128	NM_001010863|C10orf128|170371|chromosome 10 open reading frame 128	CR624206|C10orf128|170371|chromosome 10 open reading frame 128	CR618023|C10orf128|170371|chromosome 10 open reading frame 128	CR607332|C10orf128|170371|chromosome 10 open reading frame 128	BC037922|C10orf128|170371|chromosome 10 open reading frame 128	BC042857|C10orf128|170371|chromosome 10 open reading frame 128
hg18_v1_chr5_+_140154627_140154733	0.273275	SOX2.p2	BC003126|PCDHA2|56146|protocadherin alpha 2	NM_018905|PCDHA2|56146|protocadherin alpha 2	NM_031495|PCDHA2|56146|protocadherin alpha 2	AF152310|PCDHA2|56146|protocadherin alpha 2	AF152480|PCDHA2|56146|protocadherin alpha 2
hg18_v1_chr5_-_33928049_33928055	0.272618	SOX2.p2	AJ250725|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12
hg18_v1_chr5_-_75044001_75044035	0.271751	SOX2.p2	BC101325|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)	AK093098|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)	BC101326|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)	BC101327|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)	BC101328|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)	NM_152408|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)
hg18_v1_chr1_+_109221124_109221144	0.271515	SOX2.p2	AB445462|GPSM2|29899|G-protein signaling modulator 2	NM_013296|GPSM2|29899|G-protein signaling modulator 2	AK314249|GPSM2|29899|G-protein signaling modulator 2
hg18_v1_chr9_-_36266930_36267052	0.271501	SOX2.p2	AM697709|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase	AM697708|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase	AK296687|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase	AK312539|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase	NM_001128227|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase	NM_001190388|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase
hg18_v1_chr9_+_115303527_115303677	0.271479	SOX2.p2	AF463495|RGS3|5998|regulator of G-protein signaling 3	NM_130795|RGS3|5998|regulator of G-protein signaling 3	AK096840|RGS3|5998|regulator of G-protein signaling 3	BC042555|RGS3|5998|regulator of G-protein signaling 3	AF490840|RGS3|5998|regulator of G-protein signaling 3
hg18_v1_chr3_+_23904086_23904139	0.271458	SOX2.p2	CR609756|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1 (UBC4/5 homolog, yeast)
hg18_v1_chr15_+_65217412_65217412	0.271179	SOX2.p2	AK298139|SMAD3|4088|SMAD family member 3	NM_001145103|SMAD3|4088|SMAD family member 3
hg18_v1_chr10_+_11087345_11087348	0.270842	SOX2.p2	AK299548|CELF2|10659|CUGBP, Elav-like family member 2
hg18_v1_chr3_-_158703821_158703829	0.270602	SOX2.p2	BC111017|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)	AB051479|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)	NM_001167911|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)	NM_001167912|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)
hg18_v1_chr1_+_46910086_46910193	0.270364	SOX2.p2	BC067853|C1orf223|374973|chromosome 1 open reading frame 223	NM_001145474|C1orf223|374973|chromosome 1 open reading frame 223	BC057818|C1orf223|374973|chromosome 1 open reading frame 223	BC126318|C1orf223|374973|chromosome 1 open reading frame 223	BC144026|C1orf223|374973|chromosome 1 open reading frame 223	BC144027|C1orf223|374973|chromosome 1 open reading frame 223	FJ211596|C1orf223|374973|chromosome 1 open reading frame 223
hg18_v1_chr15_+_65145248_65145663	0.269296	SOX2.p2	NM_005902|SMAD3|4088|SMAD family member 3	BC050743|SMAD3|4088|SMAD family member 3	U68019|SMAD3|4088|SMAD family member 3	U76622|SMAD3|4088|SMAD family member 3	EU446487|SMAD3|4088|SMAD family member 3	AB209616|SMAD3|4088|SMAD family member 3
hg18_v1_chr1_-_155834357_155834493	0.268464	SOX2.p2	AF329490|FCRL4|83417|Fc receptor-like 4	AF397452|FCRL4|83417|Fc receptor-like 4	BC143628|FCRL4|83417|Fc receptor-like 4	BC125173|FCRL4|83417|Fc receptor-like 4	BC125174|FCRL4|83417|Fc receptor-like 4	AF343659|FCRL4|83417|Fc receptor-like 4	AF343660|FCRL4|83417|Fc receptor-like 4	AF343661|FCRL4|83417|Fc receptor-like 4	NM_031282|FCRL4|83417|Fc receptor-like 4
hg18_v1_chr5_-_158459276_158459365	0.268161	SOX2.p2	BC041178|EBF1|1879|early B-cell factor 1	AK289712|EBF1|1879|early B-cell factor 1	BC038805|EBF1|1879|early B-cell factor 1	NM_024007|EBF1|1879|early B-cell factor 1
hg18_v1_chr8_-_81155564_81155605	0.268029	SOX2.p2	AF202897|TPD52|7163|tumor protein D52	EF152584|TPD52|7163|tumor protein D52	NM_001025252|TPD52|7163|tumor protein D52	GQ499324|TPD52|7163|tumor protein D52	GQ499325|TPD52|7163|tumor protein D52	GQ499326|TPD52|7163|tumor protein D52	GQ499327|TPD52|7163|tumor protein D52	GQ499328|TPD52|7163|tumor protein D52
hg18_v1_chr7_+_5598979_5599093	0.267868	SOX2.p2	BC006304|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	NM_003088|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	BC007948|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	U03057|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	U09873|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	BC000521|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	BC007539|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	BC007988|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	DQ891402|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	DQ894580|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	BT006636|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)
hg18_v1_chr6_-_56824371_56824452	0.267493	SOX2.p2	AK294830|DST|667|dystonin
hg18_v1_chrX_+_135079461_135079461	0.266588	SOX2.p2	NM_001167819|FHL1|2273|four and a half LIM domains 1
hg18_v1_chr1_-_165754325_165754470	0.265695	SOX2.p2	DQ893778|CD247|919|CD247 molecule	EU176191|CD247|919|CD247 molecule	CR625818|CD247|919|CD247 molecule	X55510|CD247|919|CD247 molecule	X55511|CD247|919|CD247 molecule	X55512|CD247|919|CD247 molecule	CR601423|CD247|919|CD247 molecule	CR615998|CD247|919|CD247 molecule	BC025703|CD247|919|CD247 molecule	AK128376|CD247|919|CD247 molecule	AK313946|CD247|919|CD247 molecule	J04132|CD247|919|CD247 molecule	AK223325|CD247|919|CD247 molecule	NM_000734|CD247|919|CD247 molecule	NM_198053|CD247|919|CD247 molecule
hg18_v1_chrX_+_135079120_135079120	0.265644	SOX2.p2	AK122708|FHL1|2273|four and a half LIM domains 1	NM_001159704|FHL1|2273|four and a half LIM domains 1
hg18_v1_chr1_-_31117948_31118022	0.265215	SOX2.p2	AL049426|SDC3|9672|syndecan 3
hg18_v1_chr22_+_38652555_38652598	0.264733	SOX2.p2	AK303280|GRAP2|9402|GRB2-related adaptor protein 2	AK303657|GRAP2|9402|GRB2-related adaptor protein 2	AK312830|GRAP2|9402|GRB2-related adaptor protein 2	AK303470|GRAP2|9402|GRB2-related adaptor protein 2
hg18_v1_chr10_+_17311307_17311331	0.264624	SOX2.p2	CR599648|VIM|7431|vimentin	CR616791|VIM|7431|vimentin	CR618218|VIM|7431|vimentin	CR623356|VIM|7431|vimentin	CR607117|VIM|7431|vimentin	Z19554|VIM|7431|vimentin	CR596331|VIM|7431|vimentin	CR621990|VIM|7431|vimentin	CR617642|VIM|7431|vimentin	CR597703|VIM|7431|vimentin	CR620841|VIM|7431|vimentin	CR617507|VIM|7431|vimentin
hg18_v1_chr14_-_20340830_20340875	0.264028	SOX2.p2	CR600644|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)	AK312100|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)	BC022882|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)	CR593433|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)	BC005324|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)	NM_002933|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)	NM_198234|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)	NM_198235|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)
hg18_v1_chr8_-_82557956_82558030	0.263257	SOX2.p2	BT006809|FABP4|2167|fatty acid binding protein 4, adipocyte	CR456903|FABP4|2167|fatty acid binding protein 4, adipocyte	J02874|FABP4|2167|fatty acid binding protein 4, adipocyte	BC003672|FABP4|2167|fatty acid binding protein 4, adipocyte	NM_001442|FABP4|2167|fatty acid binding protein 4, adipocyte
hg18_v1_chr1_-_52791218_52791292	0.262562	SOX2.p2	BC131734|ZCCHC11|23318|zinc finger, CCHC domain containing 11	BC048301|ZCCHC11|23318|zinc finger, CCHC domain containing 11
hg18_v1_chr5_-_137882303_137882450	0.261548	SOX2.p2	CR622518|ETF1|2107|eukaryotic translation termination factor 1	BT007374|ETF1|2107|eukaryotic translation termination factor 1	DQ890706|ETF1|2107|eukaryotic translation termination factor 1	DQ893890|ETF1|2107|eukaryotic translation termination factor 1
hg18_v1_chr5_-_39400319_39400411	0.260761	SOX2.p2	K02766|C9|735|complement component 9	DQ891410|C9|735|complement component 9	X02176|C9|735|complement component 9	AK308045|C9|735|complement component 9	BC020721|C9|735|complement component 9	NM_001737|C9|735|complement component 9
hg18_v1_chr4_-_72868598_72868805	0.260404	SOX2.p2	CR624576|GC|2638|group-specific component (vitamin D binding protein)	CR615579|GC|2638|group-specific component (vitamin D binding protein)	CR592599|GC|2638|group-specific component (vitamin D binding protein)	CR597042|GC|2638|group-specific component (vitamin D binding protein)	CR600650|GC|2638|group-specific component (vitamin D binding protein)	CR615455|GC|2638|group-specific component (vitamin D binding protein)	CR618111|GC|2638|group-specific component (vitamin D binding protein)	CR589987|GC|2638|group-specific component (vitamin D binding protein)	CR604515|GC|2638|group-specific component (vitamin D binding protein)	CR615226|GC|2638|group-specific component (vitamin D binding protein)	CR625283|GC|2638|group-specific component (vitamin D binding protein)	CR593132|GC|2638|group-specific component (vitamin D binding protein)	CR612125|GC|2638|group-specific component (vitamin D binding protein)	CR625359|GC|2638|group-specific component (vitamin D binding protein)	CR626806|GC|2638|group-specific component (vitamin D binding protein)	CR605798|GC|2638|group-specific component (vitamin D binding protein)	CR611556|GC|2638|group-specific component (vitamin D binding protein)	CR623633|GC|2638|group-specific component (vitamin D binding protein)	CR591786|GC|2638|group-specific component (vitamin D binding protein)	CR598387|GC|2638|group-specific component (vitamin D binding protein)	CR599900|GC|2638|group-specific component (vitamin D binding protein)	CR600738|GC|2638|group-specific component (vitamin D binding protein)	CR601461|GC|2638|group-specific component (vitamin D binding protein)	CR606955|GC|2638|group-specific component (vitamin D binding protein)	CR622285|GC|2638|group-specific component (vitamin D binding protein)	CR591437|GC|2638|group-specific component (vitamin D binding protein)	AK290827|GC|2638|group-specific component (vitamin D binding protein)	AK298433|GC|2638|group-specific component (vitamin D binding protein)	AK312971|GC|2638|group-specific component (vitamin D binding protein)	BC057228|GC|2638|group-specific component (vitamin D binding protein)	BC022310|GC|2638|group-specific component (vitamin D binding protein)	NM_000583|GC|2638|group-specific component (vitamin D binding protein)	X03178|GC|2638|group-specific component (vitamin D binding protein)	CR602970|GC|2638|group-specific component (vitamin D binding protein)	AK315853|GC|2638|group-specific component (vitamin D binding protein)
hg18_v1_chr22_+_19601940_19602066	0.259798	SOX2.p2	CR456423|CRKL|1399|v-crk sarcoma virus CT10 oncogene homolog (avian)-like
hg18_v1_chr22_+_38627129_38627258	0.259258	SOX2.p2	AF129476|GRAP2|9402|GRB2-related adaptor protein 2	AF090456|GRAP2|9402|GRB2-related adaptor protein 2	CR456498|GRAP2|9402|GRB2-related adaptor protein 2	Y18051|GRAP2|9402|GRB2-related adaptor protein 2
hg18_v1_chr17_-_16413188_16413254	0.259129	SOX2.p2	AF217227|ZNF287|57336|zinc finger protein 287	BC041159|ZNF287|57336|zinc finger protein 287	BC057791|ZNF287|57336|zinc finger protein 287	NM_020653|ZNF287|57336|zinc finger protein 287
hg18_v1_chr4_-_24195243_24195273	0.258362	SOX2.p2	AK303506|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15	BC035974|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15
hg18_v1_chr4_-_24195276_24195298	0.25804	SOX2.p2	NM_001358|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15
hg18_v1_chr12_-_107745455_107745455	0.25797	SOX2.p2	AK095421|SSH1|54434|slingshot homolog 1 (Drosophila)	NM_001161331|SSH1|54434|slingshot homolog 1 (Drosophila)
hg18_v1_chrX_+_65300803_65300931	0.257738	SOX2.p2	NM_001130860|HEPH|9843|hephaestin	AK311043|HEPH|9843|hephaestin	AB014598|HEPH|9843|hephaestin	NM_014799|HEPH|9843|hephaestin	AY358990|HEPH|9843|hephaestin	AK307761|HEPH|9843|hephaestin
hg18_v1_chr4_+_159909658_159909813	0.257295	SOX2.p2	AB040883|FNIP2|57600|folliculin interacting protein 2	AL713802|FNIP2|57600|folliculin interacting protein 2
hg18_v1_chrX_+_118598325_118598325	0.256932	SOX2.p2	BC042021|UBE2A|7319|ubiquitin-conjugating enzyme E2A (RAD6 homolog)	NM_181777|UBE2A|7319|ubiquitin-conjugating enzyme E2A (RAD6 homolog)
hg18_v1_chr19_+_54530546_54530609	0.256407	SOX2.p2	X14046|CD37|951|CD37 molecule	CR612129|CD37|951|CD37 molecule	BC106752|CD37|951|CD37 molecule	BT019851|CD37|951|CD37 molecule	CR541877|CD37|951|CD37 molecule
hg18_v1_chr1_-_24112345_24112438	0.256382	SOX2.p2	BC069722|CNR2|1269|cannabinoid receptor 2 (macrophage)	NM_001841|CNR2|1269|cannabinoid receptor 2 (macrophage)	X74328|CNR2|1269|cannabinoid receptor 2 (macrophage)
hg18_v1_chr22_-_43272100_43272206	0.256364	SOX2.p2	CU013037|LDOC1L|84247|leucine zipper, down-regulated in cancer 1-like	CU013325|LDOC1L|84247|leucine zipper, down-regulated in cancer 1-like	CR456439|LDOC1L|84247|leucine zipper, down-regulated in cancer 1-like
hg18_v1_chr12_+_9033403_9033498	0.255985	SOX2.p2	AK316337|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1	BC012621|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1	AK301367|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1	AF081675|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1	AF097358|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1	NM_005810|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1	AF034952|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1	DQ892820|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1	DQ896066|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1
hg18_v1_chr12_-_56159631_56159692	0.255746	SOX2.p2	AK092763|ARHGAP9|64333|Rho GTPase activating protein 9	NM_001080157|ARHGAP9|64333|Rho GTPase activating protein 9
hg18_v1_chr20_-_55718351_55718439	0.254404	SOX2.p2	AF305616|PMEPA1|56937|prostate transmembrane protein, androgen induced 1	NM_020182|PMEPA1|56937|prostate transmembrane protein, androgen induced 1
hg18_v1_chr15_-_81667169_81667668	0.254398	SOX2.p2	BC015483|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	CR598906|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	CR611705|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	AB029156|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	AF110642|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	AF151900|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	AK001280|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	NM_016073|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3
hg18_v1_chr17_-_40655347_40655423	0.254312	SOX2.p2	CR604709|LOC339192|339192|hypothetical LOC339192
hg18_v1_chr19_+_1200882_1200886	0.254215	SOX2.p2	BC060848|MIDN|90007|midnolin	BC094778|MIDN|90007|midnolin
hg18_v1_chr19_-_46504831_46504973	0.253973	SOX2.p2	
hg18_v1_chr7_-_106088565_106088914	0.253697	SOX2.p2	AK093350|FLJ36031|168455|hypothetical protein FLJ36031	BC013906|FLJ36031|168455|hypothetical protein FLJ36031	NM_175884|FLJ36031|168455|hypothetical protein FLJ36031
hg18_v1_chr8_-_93177057_93177057	0.253632	SOX2.p2	NM_001198625|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198626|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198627|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198631|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198634|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198679|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg18_v1_chr9_+_90193058_90193248	0.253543	SOX2.p2	NM_006717|SPIN1|10927|spindlin 1	BC013571|SPIN1|10927|spindlin 1	AL136719|SPIN1|10927|spindlin 1	AK092017|SPIN1|10927|spindlin 1	AF087864|SPIN1|10927|spindlin 1	AF106682|SPIN1|10927|spindlin 1	AK290009|SPIN1|10927|spindlin 1
hg18_v1_chr1_+_194887630_194887870	0.252486	SOX2.p2	NM_000186|CFH|3075|complement factor H	NM_001014975|CFH|3075|complement factor H	AK291395|CFH|3075|complement factor H	AK225649|CFH|3075|complement factor H	CR616715|CFH|3075|complement factor H	X07523|CFH|3075|complement factor H	Y00716|CFH|3075|complement factor H	BC037285|CFH|3075|complement factor H	CR598844|CFH|3075|complement factor H	BC012610|CFH|3075|complement factor H	CR601432|CFH|3075|complement factor H	BC110643|CFH|3075|complement factor H	BC073982|CFH|3075|complement factor H	BC142699|CFH|3075|complement factor H
hg18_v1_chr17_-_1029758_1029880	0.251482	SOX2.p2	AK302682|ABR|29|active BCR-related gene	NM_021962|ABR|29|active BCR-related gene	U01147|ABR|29|active BCR-related gene
hg18_v1_chr4_-_109307325_109307401	0.251412	SOX2.p2	AK303272|LEF1|51176|lymphoid enhancer-binding factor 1	NM_001166119|LEF1|51176|lymphoid enhancer-binding factor 1
hg18_v1_chr10_+_5976354_5976354	0.251379	SOX2.p2	AF380349|FBXO18|84893|F-box protein, helicase, 18	NM_032807|FBXO18|84893|F-box protein, helicase, 18
hg18_v1_chr12_+_121218218_121218218	0.250792	SOX2.p2	AK124107|LRRC43|254050|leucine rich repeat containing 43	NM_152759|LRRC43|254050|leucine rich repeat containing 43
hg18_v1_chr4_+_134292630_134292837	0.249858	SOX2.p2	AK024636|PCDH10|57575|protocadherin 10	CR625417|PCDH10|57575|protocadherin 10	AL157470|PCDH10|57575|protocadherin 10
hg18_v1_chr7_+_20337249_20337270	0.249095	SOX2.p2	BC002630|ITGB8|3696|integrin, beta 8	NM_002214|ITGB8|3696|integrin, beta 8	M73780|ITGB8|3696|integrin, beta 8
hg18_v1_chr4_+_2789686_2789737	0.248827	SOX2.p2	NM_001145856|SH3BP2|6452|SH3-domain binding protein 2	U56386|SH3BP2|6452|SH3-domain binding protein 2
hg18_v1_chr7_-_76667045_76667100	0.248026	SOX2.p2	GQ129349|FGL2|10875|fibrinogen-like 2	GQ129350|FGL2|10875|fibrinogen-like 2	AK222999|FGL2|10875|fibrinogen-like 2	AK312672|FGL2|10875|fibrinogen-like 2	BC073986|FGL2|10875|fibrinogen-like 2	BC017813|FGL2|10875|fibrinogen-like 2	BC033820|FGL2|10875|fibrinogen-like 2	CR610336|FGL2|10875|fibrinogen-like 2	Z36531|FGL2|10875|fibrinogen-like 2	NM_006682|FGL2|10875|fibrinogen-like 2
hg18_v1_chr1_-_611896_611915	0.247777	SOX2.p2	NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29	NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3	NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16	BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3	BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3
hg18_v1_chr5_-_39238818_39238931	0.246534	SOX2.p2	AF198052|FYB|2533|FYN binding protein	U93049|FYB|2533|FYN binding protein	AF001862|FYB|2533|FYN binding protein
hg18_v1_chr11_+_111313227_111313360	0.246235	SOX2.p2	BC035509|DIXDC1|85458|DIX domain containing 1	BC064479|DIXDC1|85458|DIX domain containing 1	BC128600|DIXDC1|85458|DIX domain containing 1
hg18_v1_chr21_-_38792173_38792297	0.245502	SOX2.p2	AM392572|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	EU446470|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	AK304662|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	AK303518|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	BC040168|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	AK300395|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	NM_001136155|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	NM_182918|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)
hg18_v1_chr13_-_28190961_28191149	0.245428	SOX2.p2	BX537565|SLC46A3|283537|solute carrier family 46, member 3	BC060850|SLC46A3|283537|solute carrier family 46, member 3	BC068556|SLC46A3|283537|solute carrier family 46, member 3	CR611527|SLC46A3|283537|solute carrier family 46, member 3	AK093932|SLC46A3|283537|solute carrier family 46, member 3	BC036662|SLC46A3|283537|solute carrier family 46, member 3	NM_001135919|SLC46A3|283537|solute carrier family 46, member 3	NM_181785|SLC46A3|283537|solute carrier family 46, member 3
hg18_v1_chr2_-_188021117_188021265	0.245403	SOX2.p2	DQ280491|CALCRL|10203|calcitonin receptor-like	U17473|CALCRL|10203|calcitonin receptor-like	L76380|CALCRL|10203|calcitonin receptor-like	AK291630|CALCRL|10203|calcitonin receptor-like	AK292998|CALCRL|10203|calcitonin receptor-like	NM_005795|CALCRL|10203|calcitonin receptor-like
hg18_v1_chr1_-_53566331_53566408	0.244192	SOX2.p2	NM_033300|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
hg18_v1_chr1_-_21375891_21375931	0.244014	SOX2.p2	BC072413|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3	AB209119|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3
hg18_v1_chr12_+_53177758_53177786	0.243742	SOX2.p2	NM_005337|NCKAP1L|3071|NCK-associated protein 1-like
hg18_v1_chr15_+_50098700_50098723	0.243403	SOX2.p2	NM_002748|MAPK6|5597|mitogen-activated protein kinase 6
hg18_v1_chr2_+_68445936_68445987	0.241409	SOX2.p2	DQ893586|PLEK|5341|pleckstrin	DQ894896|PLEK|5341|pleckstrin	CR542056|PLEK|5341|pleckstrin	CR542079|PLEK|5341|pleckstrin
hg18_v1_chr7_+_123036312_123036347	0.241151	SOX2.p2	AF428257|ASB15|142685|ankyrin repeat and SOCS box containing 15	BC100874|ASB15|142685|ankyrin repeat and SOCS box containing 15	BC100875|ASB15|142685|ankyrin repeat and SOCS box containing 15	BC100876|ASB15|142685|ankyrin repeat and SOCS box containing 15	BC100877|ASB15|142685|ankyrin repeat and SOCS box containing 15	NM_080928|ASB15|142685|ankyrin repeat and SOCS box containing 15
hg18_v1_chr8_+_21833111_21833160	0.241139	SOX2.p2	NM_015024|XPO7|23039|exportin 7	BC030785|XPO7|23039|exportin 7
hg18_v1_chr17_-_26672757_26672892	0.240425	SOX2.p2	BC035572|EVI2A|2123|ecotropic viral integration site 2A	CR590095|EVI2A|2123|ecotropic viral integration site 2A	AK295311|EVI2A|2123|ecotropic viral integration site 2A	AK312348|EVI2A|2123|ecotropic viral integration site 2A	NM_001003927|EVI2A|2123|ecotropic viral integration site 2A	NM_014210|EVI2A|2123|ecotropic viral integration site 2A
hg18_v1_chr8_+_126511739_126511783	0.240253	SOX2.p2	BC063292|TRIB1|10221|tribbles homolog 1 (Drosophila)	NM_025195|TRIB1|10221|tribbles homolog 1 (Drosophila)
hg18_v1_chr1_+_151498802_151498802	0.239993	SOX2.p2	BC108290|LOR|4014|loricrin	NM_000427|LOR|4014|loricrin
hg18_v1_chr1_+_149299530_149299554	0.239983	SOX2.p2	BC019253|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	CR604855|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	CR612384|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	CR608900|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	CR614314|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11
hg18_v1_chr12_+_48443588_48443627	0.239215	SOX2.p2	CR602155|TMBIM6|7009|transmembrane BAX inhibitor motif containing 6	CR611691|TMBIM6|7009|transmembrane BAX inhibitor motif containing 6
hg18_v1_chr2_+_68445821_68445931	0.23908	SOX2.p2	NM_002664|PLEK|5341|pleckstrin	AK313756|PLEK|5341|pleckstrin	BC018549|PLEK|5341|pleckstrin	X07743|PLEK|5341|pleckstrin	AB208967|PLEK|5341|pleckstrin
hg18_v1_chr22_-_20419975_20420122	0.238833	SOX2.p2	BC034486|YPEL1|29799|yippee-like 1 (Drosophila)	BC074501|YPEL1|29799|yippee-like 1 (Drosophila)	BC048303|YPEL1|29799|yippee-like 1 (Drosophila)	NM_013313|YPEL1|29799|yippee-like 1 (Drosophila)	AB098734|YPEL1|29799|yippee-like 1 (Drosophila)	AB098735|YPEL1|29799|yippee-like 1 (Drosophila)
hg18_v1_chr15_-_21483457_21483495	0.237963	SOX2.p2	CR618136|NDN|4692|necdin homolog (mouse)	CR621492|NDN|4692|necdin homolog (mouse)	CR626299|NDN|4692|necdin homolog (mouse)
hg18_v1_chr7_-_5429702_5429702	0.237255	SOX2.p2	NM_001080495|TNRC18|84629|trinucleotide repeat containing 18
hg18_v1_chr11_+_9552809_9552809	0.236505	SOX2.p2	AK122837|WEE1|7465|WEE1 homolog (S. pombe)	NM_001143976|WEE1|7465|WEE1 homolog (S. pombe)
hg18_v1_chr18_-_3864252_3864316	0.236492	SOX2.p2	AK299880|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1
hg18_v1_chr1_+_61320213_61321079	0.236182	SOX2.p2	AB037860|NFIA|4774|nuclear factor I/A	NM_001134673|NFIA|4774|nuclear factor I/A	NM_005595|NFIA|4774|nuclear factor I/A	AK299356|NFIA|4774|nuclear factor I/A	BC022264|NFIA|4774|nuclear factor I/A	DQ893250|NFIA|4774|nuclear factor I/A	DQ896579|NFIA|4774|nuclear factor I/A
hg18_v1_chr1_-_205210567_205210592	0.236091	SOX2.p2	AK298394|FCAMR|83953|Fc receptor, IgA, IgM, high affinity	NM_001122979|FCAMR|83953|Fc receptor, IgA, IgM, high affinity	NM_001170631|FCAMR|83953|Fc receptor, IgA, IgM, high affinity	NM_032029|FCAMR|83953|Fc receptor, IgA, IgM, high affinity
hg18_v1_chr21_-_36870736_36870736	0.23606	SOX2.p2	AJ566766|CLDN14|23562|claudin 14	NM_001146077|CLDN14|23562|claudin 14
hg18_v1_chr9_-_85773899_85773933	0.23549	SOX2.p2	BC013220|HNRNPK|3190|heterogeneous nuclear ribonucleoprotein K
hg18_v1_chr7_-_148356697_148356714	0.233891	SOX2.p2	NM_004911|PDIA4|9601|protein disulfide isomerase family A, member 4
hg18_v1_chr2_+_108571336_108571466	0.233312	SOX2.p2	BC005341|LIMS1|3987|LIM and senescent cell antigen-like domains 1	NM_001193488|LIMS1|3987|LIM and senescent cell antigen-like domains 1
hg18_v1_chr2_+_210152609_210152669	0.233279	SOX2.p2	NM_002374|MAP2|4133|microtubule-associated protein 2	NM_031845|MAP2|4133|microtubule-associated protein 2	NM_031847|MAP2|4133|microtubule-associated protein 2	U01828|MAP2|4133|microtubule-associated protein 2	AK307603|MAP2|4133|microtubule-associated protein 2
hg18_v1_chr19_-_40939756_40939798	0.233073	SOX2.p2	CR603021|HSPB6|126393|heat shock protein, alpha-crystallin-related, B6	BC068046|HSPB6|126393|heat shock protein, alpha-crystallin-related, B6	AK297852|HSPB6|126393|heat shock protein, alpha-crystallin-related, B6	AK056951|HSPB6|126393|heat shock protein, alpha-crystallin-related, B6	NM_144617|HSPB6|126393|heat shock protein, alpha-crystallin-related, B6	CR607202|HSPB6|126393|heat shock protein, alpha-crystallin-related, B6	CR618274|HSPB6|126393|heat shock protein, alpha-crystallin-related, B6
hg18_v1_chr5_-_137502975_137503030	0.231996	SOX2.p2	U90450|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)	AK312181|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)	AF067724|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)	BC026182|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)	NM_003551|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)
hg18_v1_chrX_-_33139349_33139593	0.231843	SOX2.p2	M63073|DMD|1756|dystrophin	M63074|DMD|1756|dystrophin	X14298|DMD|1756|dystrophin	AK309142|DMD|1756|dystrophin	M18533|DMD|1756|dystrophin	BC010932|DMD|1756|dystrophin	NM_004006|DMD|1756|dystrophin
hg18_v1_chr1_+_945399_945413	0.231105	SOX2.p2	
hg18_v1_chr20_+_30019465_30019636	0.23092	SOX2.p2	AY534245|XKR7|343702|XK, Kell blood group complex subunit-related family, member 7	NM_001011718|XKR7|343702|XK, Kell blood group complex subunit-related family, member 7
hg18_v1_chr6_+_88026338_88026428	0.229966	SOX2.p2	BC063594|ZNF292|23036|zinc finger protein 292	AY684300|ZNF292|23036|zinc finger protein 292
hg18_v1_chr22_-_43272567_43272997	0.229265	SOX2.p2	BC030232|LDOC1L|84247|leucine zipper, down-regulated in cancer 1-like	NM_032287|LDOC1L|84247|leucine zipper, down-regulated in cancer 1-like	AK296479|LDOC1L|84247|leucine zipper, down-regulated in cancer 1-like
hg18_v1_chr6_-_159386007_159386171	0.228895	SOX2.p2	BC111731|TAGAP|117289|T-cell activation RhoGTPase activating protein	AK097090|TAGAP|117289|T-cell activation RhoGTPase activating protein	BC015859|TAGAP|117289|T-cell activation RhoGTPase activating protein	AL832662|TAGAP|117289|T-cell activation RhoGTPase activating protein	AF385429|TAGAP|117289|T-cell activation RhoGTPase activating protein	AF385430|TAGAP|117289|T-cell activation RhoGTPase activating protein	NM_054114|TAGAP|117289|T-cell activation RhoGTPase activating protein	NM_138810|TAGAP|117289|T-cell activation RhoGTPase activating protein	NM_152133|TAGAP|117289|T-cell activation RhoGTPase activating protein
hg18_v1_chr1_+_154855709_154855912	0.22835	SOX2.p2	AB049054|HAPLN2|60484|hyaluronan and proteoglycan link protein 2	NM_021817|HAPLN2|60484|hyaluronan and proteoglycan link protein 2	AK294131|HAPLN2|60484|hyaluronan and proteoglycan link protein 2	AK310758|HAPLN2|60484|hyaluronan and proteoglycan link protein 2	AK308805|HAPLN2|60484|hyaluronan and proteoglycan link protein 2	AK090712|HAPLN2|60484|hyaluronan and proteoglycan link protein 2	AK308980|HAPLN2|60484|hyaluronan and proteoglycan link protein 2	AK293797|HAPLN2|60484|hyaluronan and proteoglycan link protein 2	BC029864|HAPLN2|60484|hyaluronan and proteoglycan link protein 2
hg18_v1_chr10_+_11087259_11087268	0.228137	SOX2.p2	NM_001025077|CELF2|10659|CUGBP, Elav-like family member 2
hg18_v1_chr15_+_97009194_97009795	0.22794	SOX2.p2	AB425196|IGF1R|3480|insulin-like growth factor 1 receptor
hg18_v1_chr7_+_128795280_128795369	0.227794	SOX2.p2	AK025372|AHCYL2|23382|adenosylhomocysteinase-like 2
hg18_v1_chr1_-_206125877_206126015	0.227024	SOX2.p2	
hg18_v1_chr10_+_11087280_11087303	0.226898	SOX2.p2	AF090693|CELF2|10659|CUGBP, Elav-like family member 2	AK297380|CELF2|10659|CUGBP, Elav-like family member 2
hg18_v1_chr7_-_107230867_107230913	0.226775	SOX2.p2	L02785|SLC26A3|1811|solute carrier family 26, member 3	BC025671|SLC26A3|1811|solute carrier family 26, member 3	BX640837|SLC26A3|1811|solute carrier family 26, member 3	NM_000111|SLC26A3|1811|solute carrier family 26, member 3
hg18_v1_chr1_+_207823667_207823700	0.226118	SOX2.p2	NM_020439|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG	AK095713|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG	AK289675|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG	AF428261|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG	BC032787|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG
hg18_v1_chr11_+_65164963_65164995	0.22597	SOX2.p2	
hg18_v1_chr7_-_36992221_36992270	0.225917	SOX2.p2	D87457|ELMO1|9844|engulfment and cell motility 1	BC003051|ELMO1|9844|engulfment and cell motility 1	NM_130442|ELMO1|9844|engulfment and cell motility 1	BC077074|ELMO1|9844|engulfment and cell motility 1	AK301151|ELMO1|9844|engulfment and cell motility 1
hg18_v1_chr12_+_56230110_56230318	0.225516	SOX2.p2	BC146670|KIF5A|3798|kinesin family member 5A	BC150208|KIF5A|3798|kinesin family member 5A	NM_004984|KIF5A|3798|kinesin family member 5A	U06698|KIF5A|3798|kinesin family member 5A	AB210045|KIF5A|3798|kinesin family member 5A
hg18_v1_chr22_+_17799341_17799424	0.224738	SOX2.p2	AK123768|MRPL40|64976|mitochondrial ribosomal protein L40
hg18_v1_chr10_+_126620681_126620681	0.224723	SOX2.p2	NM_017580|ZRANB1|54764|zinc finger, RAN-binding domain containing 1
hg18_v1_chr4_-_24195274_24195275	0.224486	SOX2.p2	AB001636|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15
hg18_v1_chr4_+_159909626_159909631	0.224315	SOX2.p2	NM_020840|FNIP2|57600|folliculin interacting protein 2
hg18_v1_chr7_+_22733626_22733661	0.224157	SOX2.p2	X04403|IL6|3569|interleukin 6 (interferon, beta 2)
hg18_v1_chr12_+_21417068_21417122	0.223043	SOX2.p2	NM_000415|IAPP|3375|islet amyloid polypeptide	J04422|IAPP|3375|islet amyloid polypeptide	X14904|IAPP|3375|islet amyloid polypeptide
hg18_v1_chr8_+_73612179_73612216	0.222867	SOX2.p2	AF338730|KCNB2|9312|potassium voltage-gated channel, Shab-related subfamily, member 2	NM_004770|KCNB2|9312|potassium voltage-gated channel, Shab-related subfamily, member 2
hg18_v1_chr1_-_180822686_180822730	0.222278	SOX2.p2	BC114433|RNASEL|6041|ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent)	BC115697|RNASEL|6041|ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent)	NM_021133|RNASEL|6041|ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent)
hg18_v1_chr10_-_103864651_103864785	0.222148	SOX2.p2	BC000482|LDB1|8861|LIM domain binding 1	BC009246|LDB1|8861|LIM domain binding 1	NM_003893|LDB1|8861|LIM domain binding 1
hg18_v1_chr1_+_945331_945388	0.221777	SOX2.p2	AB191264|AGRN|375790|agrin	NM_198576|AGRN|375790|agrin
hg18_v1_chr11_+_65096395_65096620	0.221504	SOX2.p2	BC032373|FAM89B|23625|family with sequence similarity 89, member B	NM_001098784|FAM89B|23625|family with sequence similarity 89, member B	NM_001098785|FAM89B|23625|family with sequence similarity 89, member B	NM_152832|FAM89B|23625|family with sequence similarity 89, member B	AF052151|FAM89B|23625|family with sequence similarity 89, member B	CR612503|FAM89B|23625|family with sequence similarity 89, member B	CR616644|FAM89B|23625|family with sequence similarity 89, member B	CR615607|FAM89B|23625|family with sequence similarity 89, member B	CR610230|FAM89B|23625|family with sequence similarity 89, member B
hg18_v1_chr16_-_87535106_87535108	0.221285	SOX2.p2	AB010420|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3	NM_175931|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3
hg18_v1_chr21_-_30836051_30836053	0.221089	SOX2.p2	AB096947|KRTAP19-6|337973|keratin associated protein 19-6	AB096948|KRTAP19-6|337973|keratin associated protein 19-6	NM_181612|KRTAP19-6|337973|keratin associated protein 19-6	BC101813|KRTAP19-6|337973|keratin associated protein 19-6	BC101815|KRTAP19-6|337973|keratin associated protein 19-6
hg18_v1_chr11_-_76059435_76059480	0.220915	SOX2.p2	BC052210|LRRC32|2615|leucine rich repeat containing 32	BC070079|LRRC32|2615|leucine rich repeat containing 32	NM_001128922|LRRC32|2615|leucine rich repeat containing 32
hg18_v1_chr9_-_129557373_129557403	0.220689	SOX2.p2	AK291393|SH2D3C|10044|SH2 domain containing 3C	NM_001142534|SH2D3C|10044|SH2 domain containing 3C	AK056068|SH2D3C|10044|SH2 domain containing 3C	NM_001142533|SH2D3C|10044|SH2 domain containing 3C
hg18_v1_chr17_-_39094787_39094815	0.220669	SOX2.p2	NM_001040002|MEOX1|4222|mesenchyme homeobox 1	AK291139|MEOX1|4222|mesenchyme homeobox 1
hg18_v1_chr11_+_65164167_65164167	0.220646	SOX2.p2	AB005666|SIPA1|6494|signal-induced proliferation-associated 1	NM_153253|SIPA1|6494|signal-induced proliferation-associated 1
hg18_v1_chr2_+_108751033_108751198	0.220433	SOX2.p2	AY170822|RANBP2|5903|RAN binding protein 2
hg18_v1_chr6_+_111242516_111242536	0.220033	SOX2.p2	AK304351|AMD1|262|adenosylmethionine decarboxylase 1
hg18_v1_chr12_-_15005761_15005869	0.219733	SOX2.p2	CR596151|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	BC009200|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	CR590127|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	X69549|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	CR596642|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	CR616298|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	CR624952|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	L07916|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	AK311807|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	CR590876|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	NM_001175|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	L20688|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta
hg18_v1_chr7_-_148356664_148356688	0.219692	SOX2.p2	BC006344|PDIA4|9601|protein disulfide isomerase family A, member 4	BC011754|PDIA4|9601|protein disulfide isomerase family A, member 4	AK313299|PDIA4|9601|protein disulfide isomerase family A, member 4
hg18_v1_chr7_+_22733290_22733406	0.219379	SOX2.p2	AK298077|IL6|3569|interleukin 6 (interferon, beta 2)	AK301141|IL6|3569|interleukin 6 (interferon, beta 2)	NM_000600|IL6|3569|interleukin 6 (interferon, beta 2)	X04430|IL6|3569|interleukin 6 (interferon, beta 2)	AK298013|IL6|3569|interleukin 6 (interferon, beta 2)	M14584|IL6|3569|interleukin 6 (interferon, beta 2)	M18403|IL6|3569|interleukin 6 (interferon, beta 2)	BC015511|IL6|3569|interleukin 6 (interferon, beta 2)	M54894|IL6|3569|interleukin 6 (interferon, beta 2)	CR590965|IL6|3569|interleukin 6 (interferon, beta 2)	M29150|IL6|3569|interleukin 6 (interferon, beta 2)	X04602|IL6|3569|interleukin 6 (interferon, beta 2)	S56892|IL6|3569|interleukin 6 (interferon, beta 2)	BT019748|IL6|3569|interleukin 6 (interferon, beta 2)	BT019749|IL6|3569|interleukin 6 (interferon, beta 2)	CR450296|IL6|3569|interleukin 6 (interferon, beta 2)	DQ891463|IL6|3569|interleukin 6 (interferon, beta 2)	DQ894639|IL6|3569|interleukin 6 (interferon, beta 2)
hg18_v1_chr5_+_36912656_36912999	0.219366	SOX2.p2	BC146821|NIPBL|25836|Nipped-B homolog (Drosophila)	BX640644|NIPBL|25836|Nipped-B homolog (Drosophila)	BC131490|NIPBL|25836|Nipped-B homolog (Drosophila)	AK290347|NIPBL|25836|Nipped-B homolog (Drosophila)	BX538178|NIPBL|25836|Nipped-B homolog (Drosophila)	BX538177|NIPBL|25836|Nipped-B homolog (Drosophila)
hg18_v1_chr4_-_176970895_176970905	0.219328	SOX2.p2	BC044612|GPM6A|2823|glycoprotein M6A	BC053954|GPM6A|2823|glycoprotein M6A
hg18_v1_chr22_-_17799215_17799280	0.219292	SOX2.p2	NM_003325|HIRA|7290|HIR histone cell cycle regulation defective homolog A (S. cerevisiae)	X75296|HIRA|7290|HIR histone cell cycle regulation defective homolog A (S. cerevisiae)	X89887|HIRA|7290|HIR histone cell cycle regulation defective homolog A (S. cerevisiae)	BC032721|HIRA|7290|HIR histone cell cycle regulation defective homolog A (S. cerevisiae)
hg18_v1_chr10_-_13789628_13789762	0.218953	SOX2.p2	AK057828|FRMD4A|55691|FERM domain containing 4A
hg18_v1_chr1_+_87569959_87570047	0.218836	SOX2.p2	CR599134|LMO4|8543|LIM domain only 4	BC065818|LMO4|8543|LIM domain only 4
hg18_v1_chr4_-_164754106_164754225	0.218814	SOX2.p2	CR607777|MARCH1|55016|membrane-associated ring finger (C3HC4) 1	AK000675|MARCH1|55016|membrane-associated ring finger (C3HC4) 1	AK301408|MARCH1|55016|membrane-associated ring finger (C3HC4) 1	NM_017923|MARCH1|55016|membrane-associated ring finger (C3HC4) 1
hg18_v1_chr12_-_53065758_53065853	0.218735	SOX2.p2	AK092724|ZNF385A|25946|zinc finger protein 385A	AY461717|ZNF385A|25946|zinc finger protein 385A
hg18_v1_chr12_+_53177789_53177803	0.217953	SOX2.p2	M58285|NCKAP1L|3071|NCK-associated protein 1-like
hg18_v1_chr22_+_21852743_21852858	0.216876	SOX2.p2	AB209991|BCR|613|breakpoint cluster region
hg18_v1_chr5_+_121493113_121493176	0.216785	SOX2.p2	AK057483|ZNF474|133923|zinc finger protein 474	AY461732|ZNF474|133923|zinc finger protein 474	NM_207317|ZNF474|133923|zinc finger protein 474	AK290985|ZNF474|133923|zinc finger protein 474
hg18_v1_chrX_+_70419766_70419766	0.216292	SOX2.p2	NM_001145408|NONO|4841|non-POU domain containing, octamer-binding	NM_001145409|NONO|4841|non-POU domain containing, octamer-binding	NM_001145410|NONO|4841|non-POU domain containing, octamer-binding	NM_007363|NONO|4841|non-POU domain containing, octamer-binding
hg18_v1_chr18_+_64616296_64616349	0.215993	SOX2.p2	NM_024781|CCDC102B|79839|coiled-coil domain containing 102B	CR749520|CCDC102B|79839|coiled-coil domain containing 102B
hg18_v1_chrX_+_44588192_44588322	0.215537	SOX2.p2	AF533018|DUSP21|63904|dual specificity phosphatase 21	NM_022076|DUSP21|63904|dual specificity phosphatase 21	AF143321|DUSP21|63904|dual specificity phosphatase 21	AY121807|DUSP21|63904|dual specificity phosphatase 21	AY156515|DUSP21|63904|dual specificity phosphatase 21	BC119755|DUSP21|63904|dual specificity phosphatase 21	BC119756|DUSP21|63904|dual specificity phosphatase 21	CR457159|DUSP21|63904|dual specificity phosphatase 21
hg18_v1_chr19_-_6453224_6453411	0.215515	SOX2.p2	EU831818|TUBB4|10382|tubulin, beta 4	EU831895|TUBB4|10382|tubulin, beta 4	BC006570|TUBB4|10382|tubulin, beta 4	AK095202|TUBB4|10382|tubulin, beta 4	AK295917|TUBB4|10382|tubulin, beta 4	AK075307|TUBB4|10382|tubulin, beta 4	BC013683|TUBB4|10382|tubulin, beta 4	NM_006087|TUBB4|10382|tubulin, beta 4	AK293503|TUBB4|10382|tubulin, beta 4
hg18_v1_chr4_+_48180033_48180335	0.215369	SOX2.p2	AK126542|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4	NM_152679|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4	BC019066|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4	BC012048|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4	DQ892628|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4	EU176704|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4	AY704414|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4
hg18_v1_chrX_-_47815944_47815944	0.215271	SOX2.p2	NM_001190255|ZNF630|57232|zinc finger protein 630
hg18_v1_chr2_+_173794692_173794736	0.215271	SOX2.p2	CR606268|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK
hg18_v1_chr15_+_92642433_92642498	0.214918	SOX2.p2	NM_001159643|MCTP2|55784|multiple C2 domains, transmembrane 2	NM_018349|MCTP2|55784|multiple C2 domains, transmembrane 2	AY656717|MCTP2|55784|multiple C2 domains, transmembrane 2	BC131527|MCTP2|55784|multiple C2 domains, transmembrane 2
hg18_v1_chr1_+_109221271_109221349	0.21483	SOX2.p2	AK295563|GPSM2|29899|G-protein signaling modulator 2	BC027732|GPSM2|29899|G-protein signaling modulator 2
hg18_v1_chr6_+_84626146_84626220	0.214788	SOX2.p2	AM393033|CYB5R4|51167|cytochrome b5 reductase 4
hg18_v1_chr1_-_21375939_21375975	0.214162	SOX2.p2	NM_001198801|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3	NM_001198802|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3
hg18_v1_chr4_-_139382672_139382956	0.213999	SOX2.p2	AJ277882|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11	AB040875|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11	BC012087|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11	AK314855|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11	AF252872|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11	AB026891|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11	AF200708|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11	AK290359|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11	NM_014331|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11
hg18_v1_chr7_-_130891861_130891945	0.21393	SOX2.p2	BC042466|PODXL|5420|podocalyxin-like	U97519|PODXL|5420|podocalyxin-like	AK223573|PODXL|5420|podocalyxin-like	AK055816|PODXL|5420|podocalyxin-like	NM_001018111|PODXL|5420|podocalyxin-like	NM_005397|PODXL|5420|podocalyxin-like
hg18_v1_chr11_+_5667494_5667687	0.213751	SOX2.p2	NM_006074|TRIM22|10346|tripartite motif containing 22	AK308221|TRIM22|10346|tripartite motif containing 22	AK310098|TRIM22|10346|tripartite motif containing 22	BC022281|TRIM22|10346|tripartite motif containing 22	AK298715|TRIM22|10346|tripartite motif containing 22	BC035582|TRIM22|10346|tripartite motif containing 22	AK290434|TRIM22|10346|tripartite motif containing 22	X82200|TRIM22|10346|tripartite motif containing 22	AK308796|TRIM22|10346|tripartite motif containing 22	AK301192|TRIM22|10346|tripartite motif containing 22
hg18_v1_chr5_+_125828685_125828745	0.213713	SOX2.p2	NM_001146322|GRAMD3|65983|GRAM domain containing 3	AK303857|GRAMD3|65983|GRAM domain containing 3
hg18_v1_chr4_+_102954005_102954058	0.213644	SOX2.p2	NM_001083907|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1	AK000713|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1
hg18_v1_chr3_+_184454286_184454314	0.2126	SOX2.p2	AK091474|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
hg18_v1_chr14_+_59934178_59934231	0.211858	SOX2.p2	
hg18_v1_chr8_+_144366442_144366517	0.210596	SOX2.p2	AY245915|GPIHBP1|338328|glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1	BC035810|GPIHBP1|338328|glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1	NM_178172|GPIHBP1|338328|glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1	BC063857|GPIHBP1|338328|glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1
hg18_v1_chr22_-_48866484_48866484	0.210577	SOX2.p2	AK124264|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1	NM_015166|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1
hg18_v1_chr1_-_53566171_53566330	0.210533	SOX2.p2	Z75190|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	D50678|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	BC051836|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	NM_001018054|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	NM_004631|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	NM_017522|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
hg18_v1_chr7_-_148356433_148356543	0.210499	SOX2.p2	DQ893573|PDIA4|9601|protein disulfide isomerase family A, member 4	DQ894347|PDIA4|9601|protein disulfide isomerase family A, member 4	BC000425|PDIA4|9601|protein disulfide isomerase family A, member 4	BC001928|PDIA4|9601|protein disulfide isomerase family A, member 4	AK290971|PDIA4|9601|protein disulfide isomerase family A, member 4
hg18_v1_chr12_+_53177806_53177812	0.210473	SOX2.p2	BC093769|NCKAP1L|3071|NCK-associated protein 1-like	BC093771|NCKAP1L|3071|NCK-associated protein 1-like	BC143355|NCKAP1L|3071|NCK-associated protein 1-like
hg18_v1_chr19_-_59476734_59476844	0.210416	SOX2.p2	BC036827|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2	AF283986|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2	AF025528|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2	BC025766|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2	AK297071|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2	AK226015|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2	AK297041|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2	NM_001080978|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2	NM_005874|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2
hg18_v1_chr10_+_114699953_114700631	0.210412	SOX2.p2	AK225809|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001146274|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001146283|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001146284|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001146285|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001146286|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001198525|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001198526|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001198527|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001198528|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001198529|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001198530|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001198531|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_030756|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	FJ010174|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	Y11306|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	AK315243|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	FJ010168|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	FJ010169|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	FJ010172|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	FJ010166|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	FJ010167|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	FJ010170|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	BC032656|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	FJ010171|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	AK299295|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	AB440195|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	AB451266|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	CR536574|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352838|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352839|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352840|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352841|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352842|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352843|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352844|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352845|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352846|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352847|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352848|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352849|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352850|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352851|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	BX648364|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)
hg18_v1_chr4_-_68793928_68794006	0.209984	SOX2.p2	BC126195|TMPRSS11B|132724|transmembrane protease, serine 11B	AK310210|TMPRSS11B|132724|transmembrane protease, serine 11B	AL833167|TMPRSS11B|132724|transmembrane protease, serine 11B	BX537945|TMPRSS11B|132724|transmembrane protease, serine 11B	AK290904|TMPRSS11B|132724|transmembrane protease, serine 11B	NM_182502|TMPRSS11B|132724|transmembrane protease, serine 11B
hg18_v1_chr3_-_14964861_14964934	0.209832	SOX2.p2	BC033386|LOC100505673|100505673|hypothetical LOC100505673
hg18_v1_chr10_+_94584449_94584449	0.209589	SOX2.p2	NM_001013848|EXOC6|54536|exocyst complex component 6
hg18_v1_chr3_+_161040343_161040432	0.208874	SOX2.p2	NM_001197109|SCHIP1|29970|schwannomin interacting protein 1	AK091871|SCHIP1|29970|schwannomin interacting protein 1
hg18_v1_chr12_+_123023521_123023844	0.208856	SOX2.p2	AL834266|ZNF664|144348|zinc finger protein 664	NM_152437|ZNF664|144348|zinc finger protein 664	BC051696|ZNF664|144348|zinc finger protein 664	BC037793|ZNF664|144348|zinc finger protein 664	BX647762|ZNF664|144348|zinc finger protein 664	AK056034|ZNF664|144348|zinc finger protein 664
hg18_v1_chr5_+_177564140_177564216	0.208778	SOX2.p2	AK223425|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	CR591328|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	CR610440|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	CR610544|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	CR616453|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	CR619752|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	CR620427|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	BC004561|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	CR617383|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	BC009359|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	CR606019|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	CR607074|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	BC001616|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	BC002625|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	BC015556|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	CR590133|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	CR610666|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	CR608100|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	CR619932|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	CR623272|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	CR602810|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	CR609806|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	BC036708|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	CR619967|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	M65028|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B
hg18_v1_chr15_+_50098730_50098776	0.208727	SOX2.p2	BC035492|MAPK6|5597|mitogen-activated protein kinase 6
hg18_v1_chr6_-_136829705_136829705	0.20861	SOX2.p2	AK299355|MAP7|9053|microtubule-associated protein 7	NM_001198615|MAP7|9053|microtubule-associated protein 7
hg18_v1_chr10_-_74863303_74863375	0.20842	SOX2.p2	BC094693|ZMYND17|118490|zinc finger, MYND-type containing 17	AK309870|ZMYND17|118490|zinc finger, MYND-type containing 17	CR936824|ZMYND17|118490|zinc finger, MYND-type containing 17	AK096884|ZMYND17|118490|zinc finger, MYND-type containing 17	NM_001024593|ZMYND17|118490|zinc finger, MYND-type containing 17	BX537678|ZMYND17|118490|zinc finger, MYND-type containing 17
hg18_v1_chr7_+_142670624_142670710	0.208365	SOX2.p2	NM_001143679|GSTK1|373156|glutathione S-transferase kappa 1	NM_001143680|GSTK1|373156|glutathione S-transferase kappa 1	NM_001143681|GSTK1|373156|glutathione S-transferase kappa 1	NM_015917|GSTK1|373156|glutathione S-transferase kappa 1	AK295592|GSTK1|373156|glutathione S-transferase kappa 1	AL136938|GSTK1|373156|glutathione S-transferase kappa 1	AF087849|GSTK1|373156|glutathione S-transferase kappa 1	CR614943|GSTK1|373156|glutathione S-transferase kappa 1	AY520571|GSTK1|373156|glutathione S-transferase kappa 1	CR600089|GSTK1|373156|glutathione S-transferase kappa 1	AF070657|GSTK1|373156|glutathione S-transferase kappa 1	AK000640|GSTK1|373156|glutathione S-transferase kappa 1	BC001231|GSTK1|373156|glutathione S-transferase kappa 1	AK095263|GSTK1|373156|glutathione S-transferase kappa 1	AK289580|GSTK1|373156|glutathione S-transferase kappa 1	CR615801|GSTK1|373156|glutathione S-transferase kappa 1	AK289570|GSTK1|373156|glutathione S-transferase kappa 1
hg18_v1_chr1_-_155095289_155095335	0.207822	SOX2.p2	AF064078|INSRR|3645|insulin receptor-related receptor	NM_014215|INSRR|3645|insulin receptor-related receptor	AK310760|INSRR|3645|insulin receptor-related receptor
hg18_v1_chrX_+_149364377_149364504	0.207512	SOX2.p2	NM_001177466|MAMLD1|10046|mastermind-like domain containing 1	NM_005491|MAMLD1|10046|mastermind-like domain containing 1	U46023|MAMLD1|10046|mastermind-like domain containing 1	BC136324|MAMLD1|10046|mastermind-like domain containing 1	AK315217|MAMLD1|10046|mastermind-like domain containing 1
hg18_v1_chr8_-_107023_107023	0.207408	SOX2.p2	NM_001005504|OR4F21|441308|olfactory receptor, family 4, subfamily F, member 21
hg18_v1_chr19_+_1199548_1199600	0.206867	SOX2.p2	NM_177401|MIDN|90007|midnolin
hg18_v1_chr11_-_10787157_10787248	0.206597	SOX2.p2	NM_001042559|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	NM_001418|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2
hg18_v1_chr1_-_224563461_224563577	0.206336	SOX2.p2	AY786184|LIN9|286826|lin-9 homolog (C. elegans)	BC043444|LIN9|286826|lin-9 homolog (C. elegans)	BX537869|LIN9|286826|lin-9 homolog (C. elegans)	AK126177|LIN9|286826|lin-9 homolog (C. elegans)	AF190323|LIN9|286826|lin-9 homolog (C. elegans)	AF190324|LIN9|286826|lin-9 homolog (C. elegans)	AK308823|LIN9|286826|lin-9 homolog (C. elegans)
hg18_v1_chr17_-_36915329_36915391	0.206233	SOX2.p2	DQ890652|KRT13|3860|keratin 13	DQ893832|KRT13|3860|keratin 13	BC126184|KRT13|3860|keratin 13	BC136494|KRT13|3860|keratin 13	BC077718|KRT13|3860|keratin 13	X14640|KRT13|3860|keratin 13	CR591347|KRT13|3860|keratin 13	BC002661|KRT13|3860|keratin 13	X52426|KRT13|3860|keratin 13	AK223051|KRT13|3860|keratin 13	AK223077|KRT13|3860|keratin 13	AK290244|KRT13|3860|keratin 13	AK296806|KRT13|3860|keratin 13	AK092276|KRT13|3860|keratin 13	AK309752|KRT13|3860|keratin 13	NM_002274|KRT13|3860|keratin 13	NM_153490|KRT13|3860|keratin 13
hg18_v1_chr8_+_74369647_74369999	0.205841	SOX2.p2	AF456765|RDH10|157506|retinol dehydrogenase 10 (all-trans)	NM_172037|RDH10|157506|retinol dehydrogenase 10 (all-trans)	BC067131|RDH10|157506|retinol dehydrogenase 10 (all-trans)	AY358270|RDH10|157506|retinol dehydrogenase 10 (all-trans)
hg18_v1_chr11_+_46256130_46256143	0.205512	SOX2.p2	BC014097|CREB3L1|90993|cAMP responsive element binding protein 3-like 1	BC015781|CREB3L1|90993|cAMP responsive element binding protein 3-like 1	AB063321|CREB3L1|90993|cAMP responsive element binding protein 3-like 1
hg18_v1_chr4_+_156899575_156899733	0.205414	SOX2.p2	NM_000857|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AK315944|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AK300296|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AK315199|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AK296680|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AK307838|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	BC026332|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	BC060835|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	BC047620|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	X66533|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AF020340|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3
hg18_v1_chr20_-_45410033_45410076	0.204762	SOX2.p2	DQ082998|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ082999|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368669|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368670|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368671|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368672|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368673|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368674|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368675|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368676|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368677|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368678|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368679|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368680|ZMYND8|23613|zinc finger, MYND-type containing 8
hg18_v1_chr1_+_109827975_109828164	0.204658	SOX2.p2	BC036849|ATXN7L2|127002|ataxin 7-like 2	NM_153340|ATXN7L2|127002|ataxin 7-like 2
hg18_v1_chr1_-_26105954_26105954	0.204647	SOX2.p2	NM_203399|STMN1|3925|stathmin 1
hg18_v1_chr4_+_123311207_123311207	0.204575	SOX2.p2	DQ335469|KIAA1109|84162|KIAA1109	NM_015312|KIAA1109|84162|KIAA1109
hg18_v1_chr7_-_105106844_105106844	0.202966	SOX2.p2	AK300338|ATXN7L1|222255|ataxin 7-like 1	NM_138495|ATXN7L1|222255|ataxin 7-like 1
hg18_v1_chr6_-_32299757_32299821	0.202777	SOX2.p2	U95299|NOTCH4|4855|notch 4	BC140782|NOTCH4|4855|notch 4	BC144540|NOTCH4|4855|notch 4	BC144541|NOTCH4|4855|notch 4	BC063815|NOTCH4|4855|notch 4	AK290785|NOTCH4|4855|notch 4	NM_004557|NOTCH4|4855|notch 4
hg18_v1_chr5_-_100266769_100266886	0.202758	SOX2.p2	L41680|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	BC027866|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	AK292872|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	BC053657|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	NM_175052|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	NM_005668|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4
hg18_v1_chr3_+_112743615_112743697	0.202672	SOX2.p2	NM_005816|CD96|10225|CD96 molecule	NM_198196|CD96|10225|CD96 molecule	BC020749|CD96|10225|CD96 molecule	BC027914|CD96|10225|CD96 molecule
hg18_v1_chr10_-_75080784_75080805	0.20244	SOX2.p2	BC142635|SYNPO2L|79933|synaptopodin 2-like	BC131776|SYNPO2L|79933|synaptopodin 2-like	AK022983|SYNPO2L|79933|synaptopodin 2-like	NM_024875|SYNPO2L|79933|synaptopodin 2-like
hg18_v1_chr12_+_47498778_47498966	0.202185	SOX2.p2	NM_000725|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit	BC041811|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit	AK289709|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit	X76555|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit	U07139|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit	X76556|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit	L27584|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit
hg18_v1_chr5_+_36642424_36642547	0.201912	SOX2.p2	AK312304|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	BC037310|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK057823|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK293886|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	BC022285|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	BC054475|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK295032|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK295754|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	D26443|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	L19158|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3
hg18_v1_chr5_+_140460240_140460417	0.201639	SOX2.p2	AK313451|PCDHB3|56132|protocadherin beta 3	BC104817|PCDHB3|56132|protocadherin beta 3	AF152496|PCDHB3|56132|protocadherin beta 3	AF217755|PCDHB3|56132|protocadherin beta 3	NM_018937|PCDHB3|56132|protocadherin beta 3
hg18_v1_chr1_-_149955870_149955916	0.201354	SOX2.p2	BC004145|CELF3|11189|CUGBP, Elav-like family member 3	BC052491|CELF3|11189|CUGBP, Elav-like family member 3	AY165003|CELF3|11189|CUGBP, Elav-like family member 3	NM_007185|CELF3|11189|CUGBP, Elav-like family member 3
hg18_v1_chr1_+_149299504_149299524	0.200976	SOX2.p2	AK057755|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	BC007079|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	BC008445|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	CR602062|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	CR603022|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	CR604725|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	CR608615|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	CR593527|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11
hg18_v1_chr1_+_36121403_36121609	0.200149	SOX2.p2	AK314148|EIF2C1|26523|eukaryotic translation initiation factor 2C, 1
hg18_v1_chr11_+_13646806_13646820	0.199861	SOX2.p2	CR936619|FAR1|84188|fatty acyl CoA reductase 1	CR611981|FAR1|84188|fatty acyl CoA reductase 1
hg18_v1_chr4_+_2790338_2790338	0.19983	SOX2.p2	AB000462|SH3BP2|6452|SH3-domain binding protein 2	AB000463|SH3BP2|6452|SH3-domain binding protein 2	NM_003023|SH3BP2|6452|SH3-domain binding protein 2
hg18_v1_chr5_-_38631263_38631263	0.199351	SOX2.p2	AK308158|LIFR|3977|leukemia inhibitory factor receptor alpha	AK309882|LIFR|3977|leukemia inhibitory factor receptor alpha	NM_002310|LIFR|3977|leukemia inhibitory factor receptor alpha
hg18_v1_chr6_-_32271868_32271902	0.199277	SOX2.p2	BC033869|NOTCH4|4855|notch 4
hg18_v1_chr17_-_74361620_74361680	0.198817	SOX2.p2	CR621263|TIMP2|7077|TIMP metallopeptidase inhibitor 2
hg18_v1_chr17_+_34115383_34115450	0.198776	SOX2.p2	AK310435|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6	AK310437|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6	NM_005937|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6	U07932|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6	AB209633|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6
hg18_v1_chr11_-_6870306_6870405	0.198755	SOX2.p2	NM_003700|OR2D2|120776|olfactory receptor, family 2, subfamily D, member 2	BC140729|OR2D2|120776|olfactory receptor, family 2, subfamily D, member 2
hg18_v1_chr7_-_99517128_99517398	0.198621	SOX2.p2	BC011887|ZNF3|7551|zinc finger protein 3	BC025265|ZNF3|7551|zinc finger protein 3	BC013603|ZNF3|7551|zinc finger protein 3	AK297625|ZNF3|7551|zinc finger protein 3	AF193057|ZNF3|7551|zinc finger protein 3	AF217988|ZNF3|7551|zinc finger protein 3	AK315479|ZNF3|7551|zinc finger protein 3	AK091984|ZNF3|7551|zinc finger protein 3	CR616475|ZNF3|7551|zinc finger protein 3	NM_017715|ZNF3|7551|zinc finger protein 3	NM_032924|ZNF3|7551|zinc finger protein 3
hg18_v1_chr11_-_10786875_10787026	0.197905	SOX2.p2	BC018975|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2
hg18_v1_chr5_+_56545657_56545714	0.197903	SOX2.p2	NM_001127236|GPBP1|65056|GC-rich promoter binding protein 1	AL136844|GPBP1|65056|GC-rich promoter binding protein 1	AM392551|GPBP1|65056|GC-rich promoter binding protein 1	AM393442|GPBP1|65056|GC-rich promoter binding protein 1
hg18_v1_chr12_+_9713472_9713597	0.197874	SOX2.p2	BC063128|CLEC2D|29121|C-type lectin domain family 2, member D	NM_001197318|CLEC2D|29121|C-type lectin domain family 2, member D	NM_013269|CLEC2D|29121|C-type lectin domain family 2, member D	AK310150|CLEC2D|29121|C-type lectin domain family 2, member D	NM_001004419|CLEC2D|29121|C-type lectin domain family 2, member D	AK310554|CLEC2D|29121|C-type lectin domain family 2, member D	AK313554|CLEC2D|29121|C-type lectin domain family 2, member D	BC019883|CLEC2D|29121|C-type lectin domain family 2, member D	AF133299|CLEC2D|29121|C-type lectin domain family 2, member D	AF285087|CLEC2D|29121|C-type lectin domain family 2, member D	FN813349|CLEC2D|29121|C-type lectin domain family 2, member D	FN813350|CLEC2D|29121|C-type lectin domain family 2, member D	FN813351|CLEC2D|29121|C-type lectin domain family 2, member D	NM_001197317|CLEC2D|29121|C-type lectin domain family 2, member D	NM_001197319|CLEC2D|29121|C-type lectin domain family 2, member D
hg18_v1_chr13_-_40491405_40491482	0.197625	SOX2.p2	M82882|ELF1|1997|E74-like factor 1 (ets domain transcription factor)
hg18_v1_chr1_+_47572209_47572247	0.197125	SOX2.p2	AF259961|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic
hg18_v1_chr5_+_176955595_176955637	0.196232	SOX2.p2	
hg18_v1_chr5_+_140181405_140181544	0.195903	SOX2.p2	BC033735|PCDHA5|56143|protocadherin alpha 5	AF152313|PCDHA5|56143|protocadherin alpha 5	AF152483|PCDHA5|56143|protocadherin alpha 5	NM_018908|PCDHA5|56143|protocadherin alpha 5	NM_031501|PCDHA5|56143|protocadherin alpha 5
hg18_v1_chr4_+_109308126_109308140	0.195902	SOX2.p2	BC020624|LOC641518|641518|hypothetical LOC641518
hg18_v1_chr6_-_133076873_133076889	0.195747	SOX2.p2	U39664|VNN1|8876|vanin 1	BC096268|VNN1|8876|vanin 1	AJ132099|VNN1|8876|vanin 1	BC096265|VNN1|8876|vanin 1	BC096266|VNN1|8876|vanin 1	BC096267|VNN1|8876|vanin 1	AK290425|VNN1|8876|vanin 1	AK314265|VNN1|8876|vanin 1	NM_004666|VNN1|8876|vanin 1
hg18_v1_chr14_-_101617680_101617795	0.195574	SOX2.p2	CR619460|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1
hg18_v1_chr1_-_25619863_25619991	0.194573	SOX2.p2	AB018644|RHCE|6006|Rh blood group, CcEe antigens	AB018645|RHCE|6006|Rh blood group, CcEe antigens	AB030388|RHCE|6006|Rh blood group, CcEe antigens	AB049753|RHCE|6006|Rh blood group, CcEe antigens	AF056965|RHCE|6006|Rh blood group, CcEe antigens	AF177938|RHD|6007|Rh blood group, D antigen	AM295506|RHCE|6006|Rh blood group, CcEe antigens	DQ178642|RHCE|6006|Rh blood group, CcEe antigens	DQ266353|RHCE|6006|Rh blood group, CcEe antigens	DQ266400|RHCE|6006|Rh blood group, CcEe antigens	DQ322275|RHCE|6006|Rh blood group, CcEe antigens	GU474431|RHCE|6006|Rh blood group, CcEe antigens	GU563377|RHCE|6006|Rh blood group, CcEe antigens	S57967|RHCE|6006|Rh blood group, CcEe antigens	X63096|RHCE|6006|Rh blood group, CcEe antigens	X63095|RHCE|6006|Rh blood group, CcEe antigens	AY603478|RHCE|6006|Rh blood group, CcEe antigens	X63098|RHCE|6006|Rh blood group, CcEe antigens	Z97026|RHD|6007|Rh blood group, D antigen	BC075081|RHCE|6006|Rh blood group, CcEe antigens	M34015|RHCE|6006|Rh blood group, CcEe antigens	AF312679|RHD|6007|Rh blood group, D antigen	AF510065|RHCE|6006|Rh blood group, CcEe antigens	AF510066|RHCE|6006|Rh blood group, CcEe antigens	AF510067|RHCE|6006|Rh blood group, CcEe antigens	AF510068|RHCE|6006|Rh blood group, CcEe antigens	X54534|RHCE|6006|Rh blood group, CcEe antigens	NM_020485|RHCE|6006|Rh blood group, CcEe antigens	NM_138616|RHCE|6006|Rh blood group, CcEe antigens	NM_138617|RHCE|6006|Rh blood group, CcEe antigens	NM_138618|RHCE|6006|Rh blood group, CcEe antigens	BC139905|RHCE|6006|Rh blood group, CcEe antigens
hg18_v1_chr17_-_30783631_30783655	0.19436	SOX2.p2	AK001122|SLFN12|55106|schlafen family member 12	BC035605|SLFN12|55106|schlafen family member 12	NM_018042|SLFN12|55106|schlafen family member 12
hg18_v1_chr19_+_11510578_11510740	0.194186	SOX2.p2	BC022015|CNN1|1264|calponin 1, basic, smooth muscle	NM_001299|CNN1|1264|calponin 1, basic, smooth muscle	AK316406|CNN1|1264|calponin 1, basic, smooth muscle	BC036307|CNN1|1264|calponin 1, basic, smooth muscle	D17408|CNN1|1264|calponin 1, basic, smooth muscle	CR620483|CNN1|1264|calponin 1, basic, smooth muscle	U37019|CNN1|1264|calponin 1, basic, smooth muscle	AK223234|CNN1|1264|calponin 1, basic, smooth muscle	AK301888|CNN1|1264|calponin 1, basic, smooth muscle	AK313255|CNN1|1264|calponin 1, basic, smooth muscle	S80560|CNN1|1264|calponin 1, basic, smooth muscle	CR615873|CNN1|1264|calponin 1, basic, smooth muscle
hg18_v1_chr1_+_180836050_180836088	0.194108	SOX2.p2	
hg18_v1_chr17_-_72151314_72151488	0.193868	SOX2.p2	AY096001|ST6GALNAC1|55808|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1	BC022462|ST6GALNAC1|55808|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1	AK310906|ST6GALNAC1|55808|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1	AY358918|ST6GALNAC1|55808|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1	BC063830|ST6GALNAC1|55808|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1	NM_018414|ST6GALNAC1|55808|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1
hg18_v1_chr10_-_21475493_21475493	0.193673	SOX2.p2	BC140744|C10orf113|387638|chromosome 10 open reading frame 113	BC144447|C10orf113|387638|chromosome 10 open reading frame 113	NM_001010896|C10orf113|387638|chromosome 10 open reading frame 113	NM_001177483|C10orf113|387638|chromosome 10 open reading frame 113
hg18_v1_chr15_-_43280664_43280664	0.193648	SOX2.p2	AK096267|SHF|90525|Src homology 2 domain containing F	NM_138356|SHF|90525|Src homology 2 domain containing F
hg18_v1_chr7_+_128795178_128795266	0.193241	SOX2.p2	NM_001130723|AHCYL2|23382|adenosylhomocysteinase-like 2
hg18_v1_chr7_+_115637795_115637996	0.193219	SOX2.p2	AK299104|TES|26136|testis derived transcript (3 LIM domains)	BC001451|TES|26136|testis derived transcript (3 LIM domains)	NM_015641|TES|26136|testis derived transcript (3 LIM domains)	AK021575|TES|26136|testis derived transcript (3 LIM domains)	AK300546|TES|26136|testis derived transcript (3 LIM domains)	AK309324|TES|26136|testis derived transcript (3 LIM domains)	AK222840|TES|26136|testis derived transcript (3 LIM domains)	AF245356|TES|26136|testis derived transcript (3 LIM domains)	AJ250865|TES|26136|testis derived transcript (3 LIM domains)	AK315644|TES|26136|testis derived transcript (3 LIM domains)	EU176352|TES|26136|testis derived transcript (3 LIM domains)	EU176694|TES|26136|testis derived transcript (3 LIM domains)
hg18_v1_chr13_-_24643778_24643856	0.193039	SOX2.p2	NM_152704|FAM123A|219287|family with sequence similarity 123A	NM_199138|FAM123A|219287|family with sequence similarity 123A
hg18_v1_chr1_+_157441824_157441850	0.192893	SOX2.p2	NM_001122951|DARC|2532|Duffy blood group, chemokine receptor	AF030521|DARC|2532|Duffy blood group, chemokine receptor	BC095496|DARC|2532|Duffy blood group, chemokine receptor
hg18_v1_chrX_+_44617346_44617414	0.192806	SOX2.p2	NM_021140|KDM6A|7403|lysine (K)-specific demethylase 6A	AB208795|KDM6A|7403|lysine (K)-specific demethylase 6A
hg18_v1_chr3_+_179759181_179759311	0.192681	SOX2.p2	AF209747|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2	NM_005832|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2
hg18_v1_chr15_-_81667773_81667828	0.192672	SOX2.p2	BC040554|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3
hg18_v1_chr11_+_111313067_111313170	0.192423	SOX2.p2	DQ642016|DIXDC1|85458|DIX domain containing 1	NM_001037954|DIXDC1|85458|DIX domain containing 1
hg18_v1_chr15_+_49831030_49831200	0.191962	SOX2.p2	NM_001142885|TMOD2|29767|tropomodulin 2 (neuronal)	NM_014548|TMOD2|29767|tropomodulin 2 (neuronal)	BC036184|TMOD2|29767|tropomodulin 2 (neuronal)	BC064961|TMOD2|29767|tropomodulin 2 (neuronal)	AF177169|TMOD2|29767|tropomodulin 2 (neuronal)	AK293823|TMOD2|29767|tropomodulin 2 (neuronal)	AK292733|TMOD2|29767|tropomodulin 2 (neuronal)
hg18_v1_chr15_-_76890626_76890985	0.191799	SOX2.p2	AY327122|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7	AF140675|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7	BC061631|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7	NM_014272|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7	AK299844|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7
hg18_v1_chr3_-_130373241_130373306	0.191665	SOX2.p2	BT019613|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein	CR596443|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein	CR597317|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein	CR606309|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein	CR610184|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein	CR614312|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein	CR626515|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein
hg18_v1_chr9_+_89302574_89302803	0.191575	SOX2.p2	NM_004938|DAPK1|1612|death-associated protein kinase 1	X76104|DAPK1|1612|death-associated protein kinase 1	AK295119|DAPK1|1612|death-associated protein kinase 1
hg18_v1_chr7_+_149707338_149707382	0.191565	SOX2.p2	NM_173680|ZNF775|285971|zinc finger protein 775	BC038111|ZNF775|285971|zinc finger protein 775
hg18_v1_chr12_-_65359019_65359028	0.191498	SOX2.p2	BC115393|GRIP1|23426|glutamate receptor interacting protein 1	BC115394|GRIP1|23426|glutamate receptor interacting protein 1	AK307576|GRIP1|23426|glutamate receptor interacting protein 1
hg18_v1_chr6_+_14032655_14032655	0.19083	SOX2.p2	NM_001165034|RNF182|221687|ring finger protein 182
hg18_v1_chr22_+_21852699_21852728	0.190597	SOX2.p2	BC066122|BCR|613|breakpoint cluster region
hg18_v1_chr4_+_114190233_114190333	0.18997	SOX2.p2	NM_001148|ANK2|287|ankyrin 2, neuronal	NM_020977|ANK2|287|ankyrin 2, neuronal	AK299767|ANK2|287|ankyrin 2, neuronal	AK307601|ANK2|287|ankyrin 2, neuronal	X56958|ANK2|287|ankyrin 2, neuronal	Z26634|ANK2|287|ankyrin 2, neuronal
hg18_v1_chr1_-_200182338_200182340	0.189918	SOX2.p2	NM_012134|LMOD1|25802|leiomodin 1 (smooth muscle)
hg18_v1_chr1_-_180908639_180908689	0.189845	SOX2.p2	BC069677|RGS8|85397|regulator of G-protein signaling 8	BC069718|RGS8|85397|regulator of G-protein signaling 8	BC103865|RGS8|85397|regulator of G-protein signaling 8	BC103866|RGS8|85397|regulator of G-protein signaling 8	BC103867|RGS8|85397|regulator of G-protein signaling 8	AF297015|RGS8|85397|regulator of G-protein signaling 8	NM_001102450|RGS8|85397|regulator of G-protein signaling 8	NM_033345|RGS8|85397|regulator of G-protein signaling 8
hg18_v1_chr17_-_44037332_44037355	0.18974	SOX2.p2	BC014651|HOXB6|3216|homeobox B6	NM_018952|HOXB6|3216|homeobox B6	AK292200|HOXB6|3216|homeobox B6
hg18_v1_chr15_+_74416156_74416278	0.18964	SOX2.p2	AK001022|ISL2|64843|ISL LIM homeobox 2	BC012136|ISL2|64843|ISL LIM homeobox 2	NM_145805|ISL2|64843|ISL LIM homeobox 2	BC011967|ISL2|64843|ISL LIM homeobox 2	EU446846|ISL2|64843|ISL LIM homeobox 2
hg18_v1_chr22_+_38213174_38213298	0.18925	SOX2.p2	NM_001098270|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase	AK313664|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase	CR456519|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase	D13789|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase	CU013119|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase	CU013407|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase
hg18_v1_chr11_-_128217550_128217626	0.188963	SOX2.p2	BC136360|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1	BC136361|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1	BC074752|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1	NM_000220|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1	U12541|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1	AK314267|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1	AK290797|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1
hg18_v1_chr1_+_145841569_145841569	0.188864	SOX2.p2	NM_005267|GJA8|2703|gap junction protein, alpha 8, 50kDa
hg18_v1_chr5_+_140757787_140757878	0.188605	SOX2.p2	BC093877|PCDHGB5|56101|protocadherin gamma subfamily B, 5	BC093879|PCDHGB5|56101|protocadherin gamma subfamily B, 5	AF152334|PCDHGB5|56101|protocadherin gamma subfamily B, 5	AF152521|PCDHGB5|56101|protocadherin gamma subfamily B, 5	NM_018925|PCDHGB5|56101|protocadherin gamma subfamily B, 5	NM_032099|PCDHGB5|56101|protocadherin gamma subfamily B, 5
hg18_v1_chr18_+_70352649_70352721	0.188346	SOX2.p2	AK308716|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	NM_032649|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	AY358756|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	CR610360|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)
hg18_v1_chr3_+_20056527_20056527	0.18822	SOX2.p2	NM_003884|KAT2B|8850|K(lysine) acetyltransferase 2B	U57317|KAT2B|8850|K(lysine) acetyltransferase 2B
hg18_v1_chr5_-_160211623_160211796	0.188013	SOX2.p2	AB018258|ATP10B|23120|ATPase, class V, type 10B	AK295081|ATP10B|23120|ATPase, class V, type 10B	AK090832|ATP10B|23120|ATPase, class V, type 10B	NM_025153|ATP10B|23120|ATPase, class V, type 10B
hg18_v1_chr11_-_5247948_5247948	0.187794	SOX2.p2	NM_005330|HBE1|3046|hemoglobin, epsilon 1
hg18_v1_chr15_-_21483503_21483548	0.186578	SOX2.p2	U35139|NDN|4692|necdin homolog (mouse)	CR591182|NDN|4692|necdin homolog (mouse)	CR601504|NDN|4692|necdin homolog (mouse)	BC008750|NDN|4692|necdin homolog (mouse)	CR618894|NDN|4692|necdin homolog (mouse)	CR590044|NDN|4692|necdin homolog (mouse)	CR595233|NDN|4692|necdin homolog (mouse)	CR595786|NDN|4692|necdin homolog (mouse)	CR599213|NDN|4692|necdin homolog (mouse)	CR590944|NDN|4692|necdin homolog (mouse)	CR593341|NDN|4692|necdin homolog (mouse)	CR596254|NDN|4692|necdin homolog (mouse)	CR596560|NDN|4692|necdin homolog (mouse)	CR597888|NDN|4692|necdin homolog (mouse)	CR598564|NDN|4692|necdin homolog (mouse)	CR609537|NDN|4692|necdin homolog (mouse)	CR609863|NDN|4692|necdin homolog (mouse)	CR611314|NDN|4692|necdin homolog (mouse)	CR616323|NDN|4692|necdin homolog (mouse)	CR619220|NDN|4692|necdin homolog (mouse)	CR619365|NDN|4692|necdin homolog (mouse)	CR622500|NDN|4692|necdin homolog (mouse)	AK312779|NDN|4692|necdin homolog (mouse)	AK129654|NDN|4692|necdin homolog (mouse)	NM_002487|NDN|4692|necdin homolog (mouse)	CR614412|NDN|4692|necdin homolog (mouse)
hg18_v1_chr22_-_17798998_17799102	0.186482	SOX2.p2	CU013101|HIRA|7290|HIR histone cell cycle regulation defective homolog A (S. cerevisiae)	CU013389|HIRA|7290|HIR histone cell cycle regulation defective homolog A (S. cerevisiae)	CR456503|HIRA|7290|HIR histone cell cycle regulation defective homolog A (S. cerevisiae)	X81844|HIRA|7290|HIR histone cell cycle regulation defective homolog A (S. cerevisiae)
hg18_v1_chr12_-_56159895_56159899	0.186478	SOX2.p2	AK304107|ARHGAP9|64333|Rho GTPase activating protein 9	AB051853|ARHGAP9|64333|Rho GTPase activating protein 9	NM_032496|ARHGAP9|64333|Rho GTPase activating protein 9
hg18_v1_chr6_+_30799130_30799944	0.186051	SOX2.p2	BC001896|TUBB|203068|tubulin, beta	CR623734|TUBB|203068|tubulin, beta	DQ457058|TUBB|203068|tubulin, beta	CR609320|TUBB|203068|tubulin, beta	BC029323|TUBB|203068|tubulin, beta	BC015889|TUBB|203068|tubulin, beta	CR603884|TUBB|203068|tubulin, beta	CR595288|TUBB|203068|tubulin, beta	CR621096|TUBB|203068|tubulin, beta	CR610916|TUBB|203068|tubulin, beta	CR598257|TUBB|203068|tubulin, beta	CR620192|TUBB|203068|tubulin, beta	CR601330|TUBB|203068|tubulin, beta	CR620319|TUBB|203068|tubulin, beta	CR620286|TUBB|203068|tubulin, beta	CR614676|TUBB|203068|tubulin, beta	CR617749|TUBB|203068|tubulin, beta	CR596743|TUBB|203068|tubulin, beta	BC001002|TUBB|203068|tubulin, beta	EF036509|TUBB|203068|tubulin, beta	CR606806|TUBB|203068|tubulin, beta	CR598437|TUBB|203068|tubulin, beta
hg18_v1_chr3_-_120861959_120862126	0.185668	SOX2.p2	AF204173|POPDC2|64091|popeye domain containing 2	NM_022135|POPDC2|64091|popeye domain containing 2	AK314819|POPDC2|64091|popeye domain containing 2	BC044929|POPDC2|64091|popeye domain containing 2
hg18_v1_chr8_-_102872354_102872364	0.184662	SOX2.p2	AB209015|NCALD|83988|neurocalcin delta	AL136612|NCALD|83988|neurocalcin delta
hg18_v1_chr4_-_123761615_123761661	0.184121	SOX2.p2	DQ645417|IL21|59067|interleukin 21	BC069124|IL21|59067|interleukin 21	BC066258|IL21|59067|interleukin 21	BC066259|IL21|59067|interleukin 21	BC066260|IL21|59067|interleukin 21	BC066261|IL21|59067|interleukin 21	BC066262|IL21|59067|interleukin 21	NM_021803|IL21|59067|interleukin 21	AF254069|IL21|59067|interleukin 21
hg18_v1_chr7_+_142270634_142270640	0.184043	SOX2.p2	BC110606|EPHB6|2051|EPH receptor B6	BC110607|EPHB6|2051|EPH receptor B6
hg18_v1_chr11_+_10787328_10787419	0.183668	SOX2.p2	
hg18_v1_chr15_-_62782470_62782502	0.183494	SOX2.p2	CR624771|OAZ2|4947|ornithine decarboxylase antizyme 2
hg18_v1_chr2_-_242205556_242205588	0.183382	SOX2.p2	AK225608|THAP4|51078|THAP domain containing 4	AF132970|THAP4|51078|THAP domain containing 4	NM_001164356|THAP4|51078|THAP domain containing 4
hg18_v1_chr11_-_116605761_116605769	0.183318	SOX2.p2	BT006870|PCSK7|9159|proprotein convertase subtilisin/kexin type 7	DQ890632|PCSK7|9159|proprotein convertase subtilisin/kexin type 7	DQ893803|PCSK7|9159|proprotein convertase subtilisin/kexin type 7
hg18_v1_chr12_-_120270035_120270066	0.182675	SOX2.p2	BC034243|ANAPC5|51433|anaphase promoting complex subunit 5
hg18_v1_chrX_-_10605726_10605787	0.182641	SOX2.p2	AF041206|MID1|4281|midline 1 (Opitz/BBB syndrome)	NM_001098624|MID1|4281|midline 1 (Opitz/BBB syndrome)	AK299061|MID1|4281|midline 1 (Opitz/BBB syndrome)
hg18_v1_chr3_+_69895310_69895396	0.18253	SOX2.p2	AK296129|MITF|4286|microphthalmia-associated transcription factor	NM_001184967|MITF|4286|microphthalmia-associated transcription factor
hg18_v1_chr20_+_56904042_56904077	0.182211	SOX2.p2	M77026|GNAS|2778|GNAS complex locus	CR604694|GNAS|2778|GNAS complex locus
hg18_v1_chrX_+_64625339_64625430	0.181713	SOX2.p2	BC140767|ZC3H12B|340554|zinc finger CCCH-type containing 12B	BC171781|ZC3H12B|340554|zinc finger CCCH-type containing 12B	NM_001010888|ZC3H12B|340554|zinc finger CCCH-type containing 12B	BX647241|ZC3H12B|340554|zinc finger CCCH-type containing 12B
hg18_v1_chr14_-_106289751_106290256	0.181466	SOX2.p2	Y14735|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	BC073771|IGHA1|3493|immunoglobulin heavy constant alpha 1	BX640620|IGHM|3507|immunoglobulin heavy constant mu
hg18_v1_chr7_+_26644014_26644014	0.181368	SOX2.p2	AK093321|C7orf71|285941|chromosome 7 open reading frame 71	NM_001145531|C7orf71|285941|chromosome 7 open reading frame 71
hg18_v1_chr16_-_4262696_4262962	0.181066	SOX2.p2	X57435|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)	DQ893617|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)	DQ895293|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)	CR541726|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)	CR610803|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)	CR605422|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)	BC010576|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)
hg18_v1_chr12_-_65359148_65359191	0.180847	SOX2.p2	AK095519|GRIP1|23426|glutamate receptor interacting protein 1	NM_001178074|GRIP1|23426|glutamate receptor interacting protein 1	NM_021150|GRIP1|23426|glutamate receptor interacting protein 1
hg18_v1_chr2_+_104838177_104838483	0.180727	SOX2.p2	NM_006236|POU3F3|5455|POU class 3 homeobox 3
hg18_v1_chr15_-_80123935_80123941	0.180466	SOX2.p2	AK094145|MEX3B|84206|mex-3 homolog B (C. elegans)
hg18_v1_chr12_-_11041740_11041740	0.180338	SOX2.p2	BC100915|TAS2R20|259295|taste receptor, type 2, member 20	BC100916|TAS2R20|259295|taste receptor, type 2, member 20	BC100917|TAS2R20|259295|taste receptor, type 2, member 20	BC100918|TAS2R20|259295|taste receptor, type 2, member 20	BC113843|TAS2R20|259295|taste receptor, type 2, member 20	BC114451|TAS2R20|259295|taste receptor, type 2, member 20	NM_176889|TAS2R20|259295|taste receptor, type 2, member 20
hg18_v1_chr15_+_63609895_63610058	0.180183	SOX2.p2	BC011443|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	AK027421|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	BC000194|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	CR600449|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	AJ271091|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1
hg18_v1_chr11_+_14883118_14883133	0.179937	SOX2.p2	AK054728|CALCB|797|calcitonin-related polypeptide beta
hg18_v1_chr10_+_49562866_49562926	0.179921	SOX2.p2	BC034937|WDFY4|57705|WDFY family member 4
hg18_v1_chr5_+_15553768_15553785	0.179859	SOX2.p2	AF199356|FBXL7|23194|F-box and leucine-rich repeat protein 7
hg18_v1_chr15_+_55298908_55299010	0.179575	SOX2.p2	AK294991|TCF12|6938|transcription factor 12	AK304007|TCF12|6938|transcription factor 12	AK311359|TCF12|6938|transcription factor 12	AK308101|TCF12|6938|transcription factor 12	NM_207040|TCF12|6938|transcription factor 12	BX537967|TCF12|6938|transcription factor 12	AM393573|TCF12|6938|transcription factor 12
hg18_v1_chr11_+_93940121_93940331	0.179456	SOX2.p2	NM_152431|PIWIL4|143689|piwi-like 4 (Drosophila)	AB079366|PIWIL4|143689|piwi-like 4 (Drosophila)	AK093475|PIWIL4|143689|piwi-like 4 (Drosophila)	BC031060|PIWIL4|143689|piwi-like 4 (Drosophila)	DQ891240|PIWIL4|143689|piwi-like 4 (Drosophila)	DQ894425|PIWIL4|143689|piwi-like 4 (Drosophila)
hg18_v1_chr22_+_19239221_19239393	0.17944	SOX2.p2	BC017110|MED15|51586|mediator complex subunit 15
hg18_v1_chr8_+_145158432_145158594	0.178692	SOX2.p2	NM_001134374|SPATC1|375686|spermatogenesis and centriole associated 1	NM_198572|SPATC1|375686|spermatogenesis and centriole associated 1	BC050390|SPATC1|375686|spermatogenesis and centriole associated 1	AB092352|SPATC1|375686|spermatogenesis and centriole associated 1	AK301710|SPATC1|375686|spermatogenesis and centriole associated 1	BC053547|SPATC1|375686|spermatogenesis and centriole associated 1
hg18_v1_chr5_-_176833197_176833256	0.178651	SOX2.p2	U00802|DBN1|1627|drebrin 1	D17530|DBN1|1627|drebrin 1	BC000283|DBN1|1627|drebrin 1	BC007281|DBN1|1627|drebrin 1	BC007567|DBN1|1627|drebrin 1	AK094125|DBN1|1627|drebrin 1	AK225523|DBN1|1627|drebrin 1	AK314645|DBN1|1627|drebrin 1
hg18_v1_chr8_+_42871319_42871431	0.178148	SOX2.p2	
hg18_v1_chr1_-_149213778_149213809	0.177838	SOX2.p2	AK290989|LASS2|29956|LAG1 homolog, ceramide synthase 2	BC001357|LASS2|29956|LAG1 homolog, ceramide synthase 2
hg18_v1_chr4_-_111777956_111777956	0.177819	SOX2.p2	NM_153426|PITX2|5308|paired-like homeodomain 2	NM_153427|PITX2|5308|paired-like homeodomain 2	U69961|PITX2|5308|paired-like homeodomain 2
hg18_v1_chr10_-_98315090_98315173	0.177626	SOX2.p2	AK000756|TM9SF3|56889|transmembrane 9 superfamily member 3
hg18_v1_chr15_+_57286313_57286376	0.177612	SOX2.p2	AY642121|LDHAL6B|92483|lactate dehydrogenase A-like 6B	BC022034|LDHAL6B|92483|lactate dehydrogenase A-like 6B	AY009108|LDHAL6B|92483|lactate dehydrogenase A-like 6B	NM_033195|LDHAL6B|92483|lactate dehydrogenase A-like 6B	AK058192|LDHAL6B|92483|lactate dehydrogenase A-like 6B
hg18_v1_chr21_+_39117064_39117101	0.177119	SOX2.p2	CR608636|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)
hg18_v1_chr1_-_180626804_180626884	0.176742	SOX2.p2	BC031964|GLUL|2752|glutamate-ammonia ligase
hg18_v1_chr6_-_79732391_79732552	0.176449	SOX2.p2	BC064611|PHIP|55023|pleckstrin homology domain interacting protein	AK000712|PHIP|55023|pleckstrin homology domain interacting protein
hg18_v1_chr22_+_21852911_21853187	0.176216	SOX2.p2	X06418|BCR|613|breakpoint cluster region	EU216058|BCR|613|breakpoint cluster region	EU216059|BCR|613|breakpoint cluster region	EU216061|BCR|613|breakpoint cluster region	EU216062|BCR|613|breakpoint cluster region	EU216063|BCR|613|breakpoint cluster region	EU216064|BCR|613|breakpoint cluster region	EU216067|BCR|613|breakpoint cluster region	EU216069|BCR|613|breakpoint cluster region	EU216070|BCR|613|breakpoint cluster region
hg18_v1_chr21_-_15358996_15359180	0.176107	SOX2.p2	AK289786|NRIP1|8204|nuclear receptor interacting protein 1	NM_003489|NRIP1|8204|nuclear receptor interacting protein 1
hg18_v1_chr18_+_53967544_53967566	0.176091	SOX2.p2	AY112983|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	AY112984|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	DQ181796|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	NM_001144965|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	NM_001144968|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	NM_001144969|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	NM_001144971|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	AY112985|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like
hg18_v1_chr2_-_9061193_9061352	0.175794	SOX2.p2	AB305044|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	AK295907|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	BC146871|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	BC157827|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	AK027321|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	BC016005|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	NM_138799|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2
hg18_v1_chrX_+_106336517_106336517	0.17549	SOX2.p2	BC033510|CXorf41|139212|chromosome X open reading frame 41	NM_001169154|CXorf41|139212|chromosome X open reading frame 41	NM_173494|CXorf41|139212|chromosome X open reading frame 41
hg18_v1_chrX_-_154216929_154217179	0.174357	SOX2.p2	AM393055|CLIC2|1193|chloride intracellular channel 2	AY191592|CLIC2|1193|chloride intracellular channel 2	DQ892014|CLIC2|1193|chloride intracellular channel 2	DQ895204|CLIC2|1193|chloride intracellular channel 2	BC022305|CLIC2|1193|chloride intracellular channel 2	BC005367|CLIC2|1193|chloride intracellular channel 2	AK292785|CLIC2|1193|chloride intracellular channel 2	Y12696|CLIC2|1193|chloride intracellular channel 2	NM_001289|CLIC2|1193|chloride intracellular channel 2
hg18_v1_chr1_+_25471470_25471688	0.174354	SOX2.p2	AK297151|RHD|6007|Rh blood group, D antigen	NM_001127691|RHD|6007|Rh blood group, D antigen	NM_016124|RHD|6007|Rh blood group, D antigen	X63094|RHD|6007|Rh blood group, D antigen	BC139922|RHD|6007|Rh blood group, D antigen	AF510069|RHD|6007|Rh blood group, D antigen	AF510070|RHD|6007|Rh blood group, D antigen	AF312679|RHD|6007|Rh blood group, D antigen	Z97026|RHD|6007|Rh blood group, D antigen	DQ451878|RHD|6007|Rh blood group, D antigen	X63097|RHD|6007|Rh blood group, D antigen	AB018966|RHD|6007|Rh blood group, D antigen	AB018967|RHD|6007|Rh blood group, D antigen	AB018968|RHD|6007|Rh blood group, D antigen	AB018969|RHD|6007|Rh blood group, D antigen	AB037270|RHD|6007|Rh blood group, D antigen	AB046420|RHD|6007|Rh blood group, D antigen	AB049754|RHD|6007|Rh blood group, D antigen	AF037626|RHD|6007|Rh blood group, D antigen	AF177938|RHD|6007|Rh blood group, D antigen	AF187846|RHD|6007|Rh blood group, D antigen	AJ704215|RHD|6007|Rh blood group, D antigen	AM183924|RHD|6007|Rh blood group, D antigen	AY449381|RHD|6007|Rh blood group, D antigen	AY449382|RHD|6007|Rh blood group, D antigen	AY449383|RHD|6007|Rh blood group, D antigen	AY449384|RHD|6007|Rh blood group, D antigen	AY449385|RHD|6007|Rh blood group, D antigen	AY751491|RHD|6007|Rh blood group, D antigen	AY751492|RHD|6007|Rh blood group, D antigen	AY751493|RHD|6007|Rh blood group, D antigen	AY751494|RHD|6007|Rh blood group, D antigen	AY751495|RHD|6007|Rh blood group, D antigen	AY751496|RHD|6007|Rh blood group, D antigen	L08429|RHD|6007|Rh blood group, D antigen	S57971|RHD|6007|Rh blood group, D antigen	S70174|RHD|6007|Rh blood group, D antigen	S73913|RHD|6007|Rh blood group, D antigen	S78509|RHD|6007|Rh blood group, D antigen	S82449|RHD|6007|Rh blood group, D antigen	EU557240|RHD|6007|Rh blood group, D antigen	EU557241|RHD|6007|Rh blood group, D antigen	EU661905|RHD|6007|Rh blood group, D antigen	EU661906|RHD|6007|Rh blood group, D antigen
hg18_v1_chr9_+_115382760_115382760	0.17431	SOX2.p2	AF006609|RGS3|5998|regulator of G-protein signaling 3	NM_021106|RGS3|5998|regulator of G-protein signaling 3
hg18_v1_chr1_+_87569889_87569938	0.174296	SOX2.p2	
hg18_v1_chr11_+_13646727_13646805	0.174168	SOX2.p2	NM_032228|FAR1|84188|fatty acyl CoA reductase 1	AY358784|FAR1|84188|fatty acyl CoA reductase 1
hg18_v1_chr19_+_16105837_16105837	0.173746	SOX2.p2	AY319652|HSH2D|84941|hematopoietic SH2 domain containing	NM_032855|HSH2D|84941|hematopoietic SH2 domain containing
hg18_v1_chr1_+_199259664_199259757	0.173428	SOX2.p2	
hg18_v1_chr7_+_44754978_44755054	0.173387	SOX2.p2	AK090415|ZMIZ2|83637|zinc finger, MIZ-type containing 2	NM_031449|ZMIZ2|83637|zinc finger, MIZ-type containing 2
hg18_v1_chr14_-_104602809_104602828	0.17318	SOX2.p2	AB465599|GPR132|29933|G protein-coupled receptor 132	AB465600|GPR132|29933|G protein-coupled receptor 132	AK292142|GPR132|29933|G protein-coupled receptor 132	AK303654|GPR132|29933|G protein-coupled receptor 132
hg18_v1_chr2_+_37282516_37282652	0.173138	SOX2.p2	CR604989|LOC100505876|100505876|hypothetical LOC100505876
hg18_v1_chr10_+_82287637_82287637	0.173085	SOX2.p2	AK123885|SH2D4B|387694|SH2 domain containing 4B	NM_207372|SH2D4B|387694|SH2 domain containing 4B
hg18_v1_chr8_+_107529327_107529327	0.173063	SOX2.p2	AK296561|OXR1|55074|oxidation resistance 1	NM_001198532|OXR1|55074|oxidation resistance 1
hg18_v1_chr12_-_16649211_16649347	0.173046	SOX2.p2	AB044745|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg18_v1_chr1_-_79244948_79245082	0.17285	SOX2.p2	BC025721|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1	AY358360|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1	AK292894|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1	AK313738|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1	NM_022159|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1
hg18_v1_chr11_+_71387572_71387756	0.172796	SOX2.p2	CR605363|IL18BP|10068|interleukin 18 binding protein	NM_001039659|IL18BP|10068|interleukin 18 binding protein	NM_001039660|IL18BP|10068|interleukin 18 binding protein	AF215907|IL18BP|10068|interleukin 18 binding protein	BC044215|IL18BP|10068|interleukin 18 binding protein	AF110801|IL18BP|10068|interleukin 18 binding protein	NM_173042|IL18BP|10068|interleukin 18 binding protein
hg18_v1_chr19_+_40900757_40900784	0.172784	SOX2.p2	AJ007041|MLL4|9757|myeloid/lymphoid or mixed-lineage leukemia 4	NM_014727|MLL4|9757|myeloid/lymphoid or mixed-lineage leukemia 4
hg18_v1_chr17_-_10265991_10265991	0.172721	SOX2.p2	AK303395|MYH8|4626|myosin, heavy chain 8, skeletal muscle, perinatal	NM_002472|MYH8|4626|myosin, heavy chain 8, skeletal muscle, perinatal
hg18_v1_chr15_-_49830941_49831073	0.172563	SOX2.p2	NM_001143917|LYSMD2|256586|LysM, putative peptidoglycan-binding, domain containing 2	BC022075|LYSMD2|256586|LysM, putative peptidoglycan-binding, domain containing 2
hg18_v1_chr5_+_65053749_65053956	0.172326	SOX2.p2	NM_020726|NLN|57486|neurolysin (metallopeptidase M3 family)	AK096416|NLN|57486|neurolysin (metallopeptidase M3 family)	AK292803|NLN|57486|neurolysin (metallopeptidase M3 family)	AJ300837|NLN|57486|neurolysin (metallopeptidase M3 family)	BC001644|NLN|57486|neurolysin (metallopeptidase M3 family)	BC004985|NLN|57486|neurolysin (metallopeptidase M3 family)	AB463138|NLN|57486|neurolysin (metallopeptidase M3 family)	AB033052|NLN|57486|neurolysin (metallopeptidase M3 family)
hg18_v1_chr5_+_149845503_149845761	0.172193	SOX2.p2	AB209107|NDST1|3340|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
hg18_v1_chr15_+_91244422_91244559	0.172067	SOX2.p2	AF006514|CHD2|1106|chromodomain helicase DNA binding protein 2	NM_001042572|CHD2|1106|chromodomain helicase DNA binding protein 2	NM_001271|CHD2|1106|chromodomain helicase DNA binding protein 2	AK292850|CHD2|1106|chromodomain helicase DNA binding protein 2	BC107885|CHD2|1106|chromodomain helicase DNA binding protein 2
hg18_v1_chr21_+_33936494_33936956	0.171749	SOX2.p2	AK027846|ITSN1|6453|intersectin 1 (SH3 domain protein)	BC058925|ITSN1|6453|intersectin 1 (SH3 domain protein)	AF114487|ITSN1|6453|intersectin 1 (SH3 domain protein)	AF114488|ITSN1|6453|intersectin 1 (SH3 domain protein)	NM_001001132|ITSN1|6453|intersectin 1 (SH3 domain protein)	NM_003024|ITSN1|6453|intersectin 1 (SH3 domain protein)	AK075290|ITSN1|6453|intersectin 1 (SH3 domain protein)	BC039036|ITSN1|6453|intersectin 1 (SH3 domain protein)	BC117560|ITSN1|6453|intersectin 1 (SH3 domain protein)	AK300274|ITSN1|6453|intersectin 1 (SH3 domain protein)	BC073744|ITSN1|6453|intersectin 1 (SH3 domain protein)	AK074554|ITSN1|6453|intersectin 1 (SH3 domain protein)	BC020269|ITSN1|6453|intersectin 1 (SH3 domain protein)	BC013578|ITSN1|6453|intersectin 1 (SH3 domain protein)	AF064243|ITSN1|6453|intersectin 1 (SH3 domain protein)	AF064244|ITSN1|6453|intersectin 1 (SH3 domain protein)	DQ679754|ITSN1|6453|intersectin 1 (SH3 domain protein)	DQ679755|ITSN1|6453|intersectin 1 (SH3 domain protein)	DQ679756|ITSN1|6453|intersectin 1 (SH3 domain protein)	DQ679757|ITSN1|6453|intersectin 1 (SH3 domain protein)	EU107386|ITSN1|6453|intersectin 1 (SH3 domain protein)	EU120735|ITSN1|6453|intersectin 1 (SH3 domain protein)	EU120736|ITSN1|6453|intersectin 1 (SH3 domain protein)	EU140799|ITSN1|6453|intersectin 1 (SH3 domain protein)	EU191901|ITSN1|6453|intersectin 1 (SH3 domain protein)	BC116185|ITSN1|6453|intersectin 1 (SH3 domain protein)	BC116186|ITSN1|6453|intersectin 1 (SH3 domain protein)
hg18_v1_chr4_-_83569853_83570272	0.171504	SOX2.p2	BC007392|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR407623|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	DQ892871|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	DQ896119|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	BC071944|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	BC011714|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	BC018961|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like
hg18_v1_chr11_+_123625632_123625632	0.171473	SOX2.p2	NM_001002905|OR8G1|26494|olfactory receptor, family 8, subfamily G, member 1
hg18_v1_chr12_+_48443232_48443347	0.17136	SOX2.p2	CR624817|TMBIM6|7009|transmembrane BAX inhibitor motif containing 6	AK026605|TMBIM6|7009|transmembrane BAX inhibitor motif containing 6
hg18_v1_chr1_+_205068844_205068844	0.170638	SOX2.p2	AF453946|IL19|29949|interleukin 19	NM_013371|IL19|29949|interleukin 19
hg18_v1_chr8_+_70567634_70567652	0.170537	SOX2.p2	AY101175|SULF1|23213|sulfatase 1	AK055607|SULF1|23213|sulfatase 1	BX571746|SULF1|23213|sulfatase 1
hg18_v1_chr16_+_64958060_64958063	0.169786	SOX2.p2	U84722|CDH5|1003|cadherin 5, type 2 (vascular endothelium)
hg18_v1_chr19_-_44920451_44920507	0.169656	SOX2.p2	FJ613334|CLC|1178|Charcot-Leyden crystal protein	BC119711|CLC|1178|Charcot-Leyden crystal protein	BC119712|CLC|1178|Charcot-Leyden crystal protein	FJ613335|CLC|1178|Charcot-Leyden crystal protein	L01664|CLC|1178|Charcot-Leyden crystal protein	NM_001828|CLC|1178|Charcot-Leyden crystal protein
hg18_v1_chr7_+_116447527_116447676	0.169329	SOX2.p2	AY009152|ST7|7982|suppression of tumorigenicity 7	AY009153|ST7|7982|suppression of tumorigenicity 7	AK297510|ST7|7982|suppression of tumorigenicity 7
hg18_v1_chr2_+_108571209_108571226	0.169322	SOX2.p2	AF527763|LIMS1|3987|LIM and senescent cell antigen-like domains 1
hg18_v1_chr15_+_91244563_91244606	0.169313	SOX2.p2	BC007347|CHD2|1106|chromodomain helicase DNA binding protein 2	BC020810|CHD2|1106|chromodomain helicase DNA binding protein 2
hg18_v1_chr19_+_56990222_56990227	0.168249	SOX2.p2	AK123030|FPR3|2359|formyl peptide receptor 3	AK292541|FPR3|2359|formyl peptide receptor 3	NM_002030|FPR3|2359|formyl peptide receptor 3	BC059388|FPR3|2359|formyl peptide receptor 3
hg18_v1_chr1_-_154665807_154665994	0.16804	SOX2.p2	NM_006365|C1orf61|10485|chromosome 1 open reading frame 61	U49857|C1orf61|10485|chromosome 1 open reading frame 61	BC059943|C1orf61|10485|chromosome 1 open reading frame 61	BC107686|C1orf61|10485|chromosome 1 open reading frame 61	BC050448|C1orf61|10485|chromosome 1 open reading frame 61	AK095626|C1orf61|10485|chromosome 1 open reading frame 61	BC054045|C1orf61|10485|chromosome 1 open reading frame 61
hg18_v1_chr2_-_183095308_183095751	0.167673	SOX2.p2	AK295657|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	DQ892369|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	DQ893372|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	DQ895578|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	DQ896694|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	AF110237|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	NM_005019|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	BC022480|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	AF110236|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	NM_001003683|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	U40370|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	AK294239|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent
hg18_v1_chr12_-_47869067_47869133	0.167128	SOX2.p2	CR617927|TUBA1A|7846|tubulin, alpha 1a	BC006468|TUBA1A|7846|tubulin, alpha 1a	CR621641|TUBA1A|7846|tubulin, alpha 1a	CR596750|TUBA1A|7846|tubulin, alpha 1a	CR606172|TUBA1A|7846|tubulin, alpha 1a	CR608442|TUBA1A|7846|tubulin, alpha 1a	CR610265|TUBA1A|7846|tubulin, alpha 1a	CR607378|TUBA1A|7846|tubulin, alpha 1a	CR615137|TUBA1A|7846|tubulin, alpha 1a	CR618187|TUBA1A|7846|tubulin, alpha 1a	CR620195|TUBA1A|7846|tubulin, alpha 1a	CR595876|TUBA1A|7846|tubulin, alpha 1a	CR608373|TUBA1A|7846|tubulin, alpha 1a	CR605491|TUBA1A|7846|tubulin, alpha 1a	CR607118|TUBA1A|7846|tubulin, alpha 1a	CR590541|TUBA1A|7846|tubulin, alpha 1a	CR591654|TUBA1A|7846|tubulin, alpha 1a	CR597918|TUBA1A|7846|tubulin, alpha 1a	CR598057|TUBA1A|7846|tubulin, alpha 1a	CR598989|TUBA1A|7846|tubulin, alpha 1a	CR602824|TUBA1A|7846|tubulin, alpha 1a	CR604529|TUBA1A|7846|tubulin, alpha 1a	CR605616|TUBA1A|7846|tubulin, alpha 1a	CR607200|TUBA1A|7846|tubulin, alpha 1a	CR610101|TUBA1A|7846|tubulin, alpha 1a	CR611043|TUBA1A|7846|tubulin, alpha 1a	CR616036|TUBA1A|7846|tubulin, alpha 1a	CR621097|TUBA1A|7846|tubulin, alpha 1a	CR622155|TUBA1A|7846|tubulin, alpha 1a	CR623663|TUBA1A|7846|tubulin, alpha 1a	CR624192|TUBA1A|7846|tubulin, alpha 1a	BC050637|TUBA1A|7846|tubulin, alpha 1a	CR590950|TUBA1A|7846|tubulin, alpha 1a	CR592146|TUBA1A|7846|tubulin, alpha 1a	CR593050|TUBA1A|7846|tubulin, alpha 1a	CR595385|TUBA1A|7846|tubulin, alpha 1a	CR596815|TUBA1A|7846|tubulin, alpha 1a	CR597522|TUBA1A|7846|tubulin, alpha 1a	CR598945|TUBA1A|7846|tubulin, alpha 1a	CR601913|TUBA1A|7846|tubulin, alpha 1a	CR602723|TUBA1A|7846|tubulin, alpha 1a	CR604076|TUBA1A|7846|tubulin, alpha 1a	CR606863|TUBA1A|7846|tubulin, alpha 1a	CR607886|TUBA1A|7846|tubulin, alpha 1a	CR608895|TUBA1A|7846|tubulin, alpha 1a	CR609424|TUBA1A|7846|tubulin, alpha 1a	CR610065|TUBA1A|7846|tubulin, alpha 1a	CR612996|TUBA1A|7846|tubulin, alpha 1a	CR616525|TUBA1A|7846|tubulin, alpha 1a	CR616897|TUBA1A|7846|tubulin, alpha 1a	CR605985|TUBA1A|7846|tubulin, alpha 1a	CR593320|TUBA1A|7846|tubulin, alpha 1a	CR621268|TUBA1A|7846|tubulin, alpha 1a	CR594062|TUBA1A|7846|tubulin, alpha 1a	CR596970|TUBA1A|7846|tubulin, alpha 1a	CR596983|TUBA1A|7846|tubulin, alpha 1a	CR600175|TUBA1A|7846|tubulin, alpha 1a	CR604014|TUBA1A|7846|tubulin, alpha 1a	CR614212|TUBA1A|7846|tubulin, alpha 1a	CR624073|TUBA1A|7846|tubulin, alpha 1a	CR591504|TUBA1A|7846|tubulin, alpha 1a	CR593739|TUBA1A|7846|tubulin, alpha 1a	CR604006|TUBA1A|7846|tubulin, alpha 1a	CR622591|TUBA1A|7846|tubulin, alpha 1a	CR623826|TUBA1A|7846|tubulin, alpha 1a	CR625536|TUBA1A|7846|tubulin, alpha 1a	AF141347|TUBA1A|7846|tubulin, alpha 1a	CR592638|TUBA1A|7846|tubulin, alpha 1a	CR614316|TUBA1A|7846|tubulin, alpha 1a	CR593244|TUBA1A|7846|tubulin, alpha 1a	CR593317|TUBA1A|7846|tubulin, alpha 1a	CR600113|TUBA1A|7846|tubulin, alpha 1a	CR600854|TUBA1A|7846|tubulin, alpha 1a	CR602040|TUBA1A|7846|tubulin, alpha 1a	CR606118|TUBA1A|7846|tubulin, alpha 1a	CR607379|TUBA1A|7846|tubulin, alpha 1a	CR608614|TUBA1A|7846|tubulin, alpha 1a	CR614334|TUBA1A|7846|tubulin, alpha 1a	CR616625|TUBA1A|7846|tubulin, alpha 1a	CR618923|TUBA1A|7846|tubulin, alpha 1a	CR619222|TUBA1A|7846|tubulin, alpha 1a	CR621713|TUBA1A|7846|tubulin, alpha 1a	CR626181|TUBA1A|7846|tubulin, alpha 1a	CR592123|TUBA1A|7846|tubulin, alpha 1a	CR593994|TUBA1A|7846|tubulin, alpha 1a	CR601586|TUBA1A|7846|tubulin, alpha 1a	CR609811|TUBA1A|7846|tubulin, alpha 1a	CR612526|TUBA1A|7846|tubulin, alpha 1a	CR598412|TUBA1A|7846|tubulin, alpha 1a	CR607887|TUBA1A|7846|tubulin, alpha 1a	CR619513|TUBA1A|7846|tubulin, alpha 1a	CR600932|TUBA1A|7846|tubulin, alpha 1a	CR604714|TUBA1A|7846|tubulin, alpha 1a	CR605195|TUBA1A|7846|tubulin, alpha 1a	CR614350|TUBA1A|7846|tubulin, alpha 1a	CR616051|TUBA1A|7846|tubulin, alpha 1a	CR621897|TUBA1A|7846|tubulin, alpha 1a	CR626048|TUBA1A|7846|tubulin, alpha 1a	CR591464|TUBA1A|7846|tubulin, alpha 1a	CR618255|TUBA1A|7846|tubulin, alpha 1a	CR592696|TUBA1A|7846|tubulin, alpha 1a	CR600390|TUBA1A|7846|tubulin, alpha 1a	CR604534|TUBA1A|7846|tubulin, alpha 1a	CR616952|TUBA1A|7846|tubulin, alpha 1a	CR618736|TUBA1A|7846|tubulin, alpha 1a	CR625013|TUBA1A|7846|tubulin, alpha 1a	CR590305|TUBA1A|7846|tubulin, alpha 1a	CR590348|TUBA1A|7846|tubulin, alpha 1a	CR590896|TUBA1A|7846|tubulin, alpha 1a	CR591133|TUBA1A|7846|tubulin, alpha 1a	CR591241|TUBA1A|7846|tubulin, alpha 1a	CR591515|TUBA1A|7846|tubulin, alpha 1a	CR593877|TUBA1A|7846|tubulin, alpha 1a	CR594034|TUBA1A|7846|tubulin, alpha 1a	CR594060|TUBA1A|7846|tubulin, alpha 1a	CR594066|TUBA1A|7846|tubulin, alpha 1a	CR594647|TUBA1A|7846|tubulin, alpha 1a	CR595260|TUBA1A|7846|tubulin, alpha 1a	CR595514|TUBA1A|7846|tubulin, alpha 1a	CR596417|TUBA1A|7846|tubulin, alpha 1a	CR596908|TUBA1A|7846|tubulin, alpha 1a	CR598075|TUBA1A|7846|tubulin, alpha 1a	CR598102|TUBA1A|7846|tubulin, alpha 1a	CR598675|TUBA1A|7846|tubulin, alpha 1a	CR599102|TUBA1A|7846|tubulin, alpha 1a	CR599543|TUBA1A|7846|tubulin, alpha 1a	CR600172|TUBA1A|7846|tubulin, alpha 1a	CR600829|TUBA1A|7846|tubulin, alpha 1a	CR602196|TUBA1A|7846|tubulin, alpha 1a	CR602663|TUBA1A|7846|tubulin, alpha 1a	CR602913|TUBA1A|7846|tubulin, alpha 1a	CR603945|TUBA1A|7846|tubulin, alpha 1a	CR604782|TUBA1A|7846|tubulin, alpha 1a	CR604788|TUBA1A|7846|tubulin, alpha 1a	CR605308|TUBA1A|7846|tubulin, alpha 1a	CR605536|TUBA1A|7846|tubulin, alpha 1a	CR608160|TUBA1A|7846|tubulin, alpha 1a	CR608525|TUBA1A|7846|tubulin, alpha 1a	CR608804|TUBA1A|7846|tubulin, alpha 1a	CR608850|TUBA1A|7846|tubulin, alpha 1a	CR610612|TUBA1A|7846|tubulin, alpha 1a	CR610649|TUBA1A|7846|tubulin, alpha 1a	CR611347|TUBA1A|7846|tubulin, alpha 1a	CR612458|TUBA1A|7846|tubulin, alpha 1a	CR612699|TUBA1A|7846|tubulin, alpha 1a	CR613508|TUBA1A|7846|tubulin, alpha 1a	CR613952|TUBA1A|7846|tubulin, alpha 1a	CR615495|TUBA1A|7846|tubulin, alpha 1a	CR615697|TUBA1A|7846|tubulin, alpha 1a	CR615711|TUBA1A|7846|tubulin, alpha 1a	CR615724|TUBA1A|7846|tubulin, alpha 1a	CR616370|TUBA1A|7846|tubulin, alpha 1a	CR616410|TUBA1A|7846|tubulin, alpha 1a	CR616875|TUBA1A|7846|tubulin, alpha 1a	CR616978|TUBA1A|7846|tubulin, alpha 1a	CR616979|TUBA1A|7846|tubulin, alpha 1a	CR616980|TUBA1A|7846|tubulin, alpha 1a	CR618385|TUBA1A|7846|tubulin, alpha 1a	CR618711|TUBA1A|7846|tubulin, alpha 1a	CR618941|TUBA1A|7846|tubulin, alpha 1a	CR619454|TUBA1A|7846|tubulin, alpha 1a	CR619658|TUBA1A|7846|tubulin, alpha 1a	CR619965|TUBA1A|7846|tubulin, alpha 1a	CR620710|TUBA1A|7846|tubulin, alpha 1a	CR620745|TUBA1A|7846|tubulin, alpha 1a	CR620859|TUBA1A|7846|tubulin, alpha 1a	CR622451|TUBA1A|7846|tubulin, alpha 1a	CR622843|TUBA1A|7846|tubulin, alpha 1a	CR624888|TUBA1A|7846|tubulin, alpha 1a	CR625134|TUBA1A|7846|tubulin, alpha 1a	CR625301|TUBA1A|7846|tubulin, alpha 1a	CR626848|TUBA1A|7846|tubulin, alpha 1a	CR592034|TUBA1A|7846|tubulin, alpha 1a	CR593029|TUBA1A|7846|tubulin, alpha 1a	CR603623|TUBA1A|7846|tubulin, alpha 1a	CR613183|TUBA1A|7846|tubulin, alpha 1a	CR618339|TUBA1A|7846|tubulin, alpha 1a	CR623665|TUBA1A|7846|tubulin, alpha 1a	CR626392|TUBA1A|7846|tubulin, alpha 1a	CR604467|TUBA1A|7846|tubulin, alpha 1a	CR601584|TUBA1A|7846|tubulin, alpha 1a	CR604072|TUBA1A|7846|tubulin, alpha 1a	CR614572|TUBA1A|7846|tubulin, alpha 1a	CR617729|TUBA1A|7846|tubulin, alpha 1a	CR618708|TUBA1A|7846|tubulin, alpha 1a	CR590784|TUBA1A|7846|tubulin, alpha 1a	CR615205|TUBA1A|7846|tubulin, alpha 1a	CR590984|TUBA1A|7846|tubulin, alpha 1a	CR591011|TUBA1A|7846|tubulin, alpha 1a	CR591275|TUBA1A|7846|tubulin, alpha 1a	CR591653|TUBA1A|7846|tubulin, alpha 1a	CR591655|TUBA1A|7846|tubulin, alpha 1a	CR592062|TUBA1A|7846|tubulin, alpha 1a	CR592132|TUBA1A|7846|tubulin, alpha 1a	CR592293|TUBA1A|7846|tubulin, alpha 1a	CR592430|TUBA1A|7846|tubulin, alpha 1a	CR592537|TUBA1A|7846|tubulin, alpha 1a	CR592708|TUBA1A|7846|tubulin, alpha 1a	CR593264|TUBA1A|7846|tubulin, alpha 1a	CR593488|TUBA1A|7846|tubulin, alpha 1a	CR594084|TUBA1A|7846|tubulin, alpha 1a	CR594550|TUBA1A|7846|tubulin, alpha 1a	CR595041|TUBA1A|7846|tubulin, alpha 1a	CR595457|TUBA1A|7846|tubulin, alpha 1a	CR596285|TUBA1A|7846|tubulin, alpha 1a	CR596409|TUBA1A|7846|tubulin, alpha 1a	CR596836|TUBA1A|7846|tubulin, alpha 1a	CR597413|TUBA1A|7846|tubulin, alpha 1a	CR597725|TUBA1A|7846|tubulin, alpha 1a	CR598217|TUBA1A|7846|tubulin, alpha 1a	CR598369|TUBA1A|7846|tubulin, alpha 1a	CR598408|TUBA1A|7846|tubulin, alpha 1a	CR598516|TUBA1A|7846|tubulin, alpha 1a	CR598719|TUBA1A|7846|tubulin, alpha 1a	CR598958|TUBA1A|7846|tubulin, alpha 1a	CR598973|TUBA1A|7846|tubulin, alpha 1a	CR599248|TUBA1A|7846|tubulin, alpha 1a	CR599666|TUBA1A|7846|tubulin, alpha 1a	CR599962|TUBA1A|7846|tubulin, alpha 1a	CR600079|TUBA1A|7846|tubulin, alpha 1a	CR600126|TUBA1A|7846|tubulin, alpha 1a	CR600236|TUBA1A|7846|tubulin, alpha 1a	CR600237|TUBA1A|7846|tubulin, alpha 1a	CR601427|TUBA1A|7846|tubulin, alpha 1a	CR601535|TUBA1A|7846|tubulin, alpha 1a	CR601951|TUBA1A|7846|tubulin, alpha 1a	CR602360|TUBA1A|7846|tubulin, alpha 1a	CR602775|TUBA1A|7846|tubulin, alpha 1a	CR603584|TUBA1A|7846|tubulin, alpha 1a	CR603604|TUBA1A|7846|tubulin, alpha 1a	CR603752|TUBA1A|7846|tubulin, alpha 1a	CR603942|TUBA1A|7846|tubulin, alpha 1a	CR603969|TUBA1A|7846|tubulin, alpha 1a	CR605154|TUBA1A|7846|tubulin, alpha 1a	CR605304|TUBA1A|7846|tubulin, alpha 1a	CR606121|TUBA1A|7846|tubulin, alpha 1a	CR606970|TUBA1A|7846|tubulin, alpha 1a	CR607235|TUBA1A|7846|tubulin, alpha 1a	CR607284|TUBA1A|7846|tubulin, alpha 1a	CR607806|TUBA1A|7846|tubulin, alpha 1a	CR607938|TUBA1A|7846|tubulin, alpha 1a	CR607971|TUBA1A|7846|tubulin, alpha 1a	CR608399|TUBA1A|7846|tubulin, alpha 1a	CR608967|TUBA1A|7846|tubulin, alpha 1a	CR609323|TUBA1A|7846|tubulin, alpha 1a	CR609686|TUBA1A|7846|tubulin, alpha 1a	CR610674|TUBA1A|7846|tubulin, alpha 1a	CR610761|TUBA1A|7846|tubulin, alpha 1a	CR611047|TUBA1A|7846|tubulin, alpha 1a	CR611222|TUBA1A|7846|tubulin, alpha 1a	CR611610|TUBA1A|7846|tubulin, alpha 1a	CR611647|TUBA1A|7846|tubulin, alpha 1a	CR612520|TUBA1A|7846|tubulin, alpha 1a	CR613002|TUBA1A|7846|tubulin, alpha 1a	CR614113|TUBA1A|7846|tubulin, alpha 1a	CR614118|TUBA1A|7846|tubulin, alpha 1a	CR614378|TUBA1A|7846|tubulin, alpha 1a	CR614551|TUBA1A|7846|tubulin, alpha 1a	CR615075|TUBA1A|7846|tubulin, alpha 1a	CR615166|TUBA1A|7846|tubulin, alpha 1a	CR616032|TUBA1A|7846|tubulin, alpha 1a	CR616068|TUBA1A|7846|tubulin, alpha 1a	CR616371|TUBA1A|7846|tubulin, alpha 1a	CR616965|TUBA1A|7846|tubulin, alpha 1a	CR617030|TUBA1A|7846|tubulin, alpha 1a	CR617789|TUBA1A|7846|tubulin, alpha 1a	CR618788|TUBA1A|7846|tubulin, alpha 1a	CR619179|TUBA1A|7846|tubulin, alpha 1a	CR619445|TUBA1A|7846|tubulin, alpha 1a	CR619898|TUBA1A|7846|tubulin, alpha 1a	CR620189|TUBA1A|7846|tubulin, alpha 1a	CR620492|TUBA1A|7846|tubulin, alpha 1a	CR620793|TUBA1A|7846|tubulin, alpha 1a	CR621215|TUBA1A|7846|tubulin, alpha 1a	CR621574|TUBA1A|7846|tubulin, alpha 1a	CR621901|TUBA1A|7846|tubulin, alpha 1a	CR622543|TUBA1A|7846|tubulin, alpha 1a	CR623135|TUBA1A|7846|tubulin, alpha 1a	CR623412|TUBA1A|7846|tubulin, alpha 1a	CR623579|TUBA1A|7846|tubulin, alpha 1a	CR624173|TUBA1A|7846|tubulin, alpha 1a	CR624183|TUBA1A|7846|tubulin, alpha 1a	CR624685|TUBA1A|7846|tubulin, alpha 1a	CR624772|TUBA1A|7846|tubulin, alpha 1a	CR625764|TUBA1A|7846|tubulin, alpha 1a	CR626641|TUBA1A|7846|tubulin, alpha 1a	CR594477|TUBA1A|7846|tubulin, alpha 1a	AK057842|TUBA1A|7846|tubulin, alpha 1a	AK297775|TUBA1A|7846|tubulin, alpha 1a	BC057823|TUBA1A|7846|tubulin, alpha 1a	NM_006009|TUBA1A|7846|tubulin, alpha 1a	AK298838|TUBA1A|7846|tubulin, alpha 1a	CR612808|TUBA1A|7846|tubulin, alpha 1a	CR624125|TUBA1A|7846|tubulin, alpha 1a
hg18_v1_chr18_-_21186107_21186215	0.166987	SOX2.p2	AJ518106|ZNF521|25925|zinc finger protein 521	BC032869|ZNF521|25925|zinc finger protein 521	AK027354|ZNF521|25925|zinc finger protein 521	AK293067|ZNF521|25925|zinc finger protein 521	NM_015461|ZNF521|25925|zinc finger protein 521
hg18_v1_chr9_-_35640852_35640946	0.166903	SOX2.p2	CR624155|SIT1|27240|signaling threshold regulating transmembrane adaptor 1	AK314758|SIT1|27240|signaling threshold regulating transmembrane adaptor 1	AJ010059|SIT1|27240|signaling threshold regulating transmembrane adaptor 1	BC102029|SIT1|27240|signaling threshold regulating transmembrane adaptor 1	BC104491|SIT1|27240|signaling threshold regulating transmembrane adaptor 1	BC107484|SIT1|27240|signaling threshold regulating transmembrane adaptor 1	NM_014450|SIT1|27240|signaling threshold regulating transmembrane adaptor 1
hg18_v1_chr3_+_161040439_161040667	0.166673	SOX2.p2	CR593613|SCHIP1|29970|schwannomin interacting protein 1	BC005947|SCHIP1|29970|schwannomin interacting protein 1	CR607434|SCHIP1|29970|schwannomin interacting protein 1
hg18_v1_chr7_+_149200937_149201013	0.166545	SOX2.p2	AF452639|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2	AK057700|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2	NM_001100592|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2	NM_145230|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2
hg18_v1_chr21_+_42583259_42583306	0.166338	SOX2.p2	AF038175|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1
hg18_v1_chr5_+_140703784_140703786	0.166204	SOX2.p2	AF152323|PCDHGA3|56112|protocadherin gamma subfamily A, 3	AF152509|PCDHGA3|56112|protocadherin gamma subfamily A, 3	AF152510|PCDHGA3|56112|protocadherin gamma subfamily A, 3	BC115408|PCDHGA3|56112|protocadherin gamma subfamily A, 3	BC115409|PCDHGA3|56112|protocadherin gamma subfamily A, 3	NM_018916|PCDHGA3|56112|protocadherin gamma subfamily A, 3	NM_032011|PCDHGA3|56112|protocadherin gamma subfamily A, 3	BC133708|PCDHGA3|56112|protocadherin gamma subfamily A, 3
hg18_v1_chr5_+_132037271_132037271	0.166087	SOX2.p2	NM_000589|IL4|3565|interleukin 4	NM_172348|IL4|3565|interleukin 4
hg18_v1_chr15_-_62782427_62782469	0.165873	SOX2.p2	AF242520|OAZ2|4947|ornithine decarboxylase antizyme 2	AF242521|OAZ2|4947|ornithine decarboxylase antizyme 2	CR590996|OAZ2|4947|ornithine decarboxylase antizyme 2	CR611250|OAZ2|4947|ornithine decarboxylase antizyme 2	AF057297|OAZ2|4947|ornithine decarboxylase antizyme 2	CR603676|OAZ2|4947|ornithine decarboxylase antizyme 2	BC063577|OAZ2|4947|ornithine decarboxylase antizyme 2	CR604161|OAZ2|4947|ornithine decarboxylase antizyme 2	BC073877|OAZ2|4947|ornithine decarboxylase antizyme 2	CR590699|OAZ2|4947|ornithine decarboxylase antizyme 2	CR594645|OAZ2|4947|ornithine decarboxylase antizyme 2	CR596383|OAZ2|4947|ornithine decarboxylase antizyme 2	CR593659|OAZ2|4947|ornithine decarboxylase antizyme 2	CR616925|OAZ2|4947|ornithine decarboxylase antizyme 2	BC035493|OAZ2|4947|ornithine decarboxylase antizyme 2	CR601685|OAZ2|4947|ornithine decarboxylase antizyme 2	CR606371|OAZ2|4947|ornithine decarboxylase antizyme 2	CR612625|OAZ2|4947|ornithine decarboxylase antizyme 2	BC092483|OAZ2|4947|ornithine decarboxylase antizyme 2
hg18_v1_chr7_-_148212230_148212291	0.165718	SOX2.p2	X95653|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	U61145|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	AK092676|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)
hg18_v1_chr6_+_37511383_37511447	0.165702	SOX2.p2	
hg18_v1_chr1_+_47572075_47572204	0.165436	SOX2.p2	BC017806|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	AF087865|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	AF112216|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	CR602827|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	AF110643|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	AK223014|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	AK294294|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	AK298502|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	AF070416|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	AK025258|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	AK293238|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	AK312693|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	BC014961|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	DQ892213|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	DQ895408|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	DQ895409|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic
hg18_v1_chrX_-_151911260_151911416	0.165081	SOX2.p2	BC101111|PNMA5|114824|paraneoplastic antigen like 5	BC101112|PNMA5|114824|paraneoplastic antigen like 5	BC101113|PNMA5|114824|paraneoplastic antigen like 5	AK295446|PNMA5|114824|paraneoplastic antigen like 5	AK316104|PNMA5|114824|paraneoplastic antigen like 5	AB067521|PNMA5|114824|paraneoplastic antigen like 5	AY121806|PNMA5|114824|paraneoplastic antigen like 5	NM_001103150|PNMA5|114824|paraneoplastic antigen like 5	NM_001103151|PNMA5|114824|paraneoplastic antigen like 5	NM_052926|PNMA5|114824|paraneoplastic antigen like 5
hg18_v1_chr15_-_56093477_56093526	0.164834	SOX2.p2	AB015228|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2	AB015227|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2	NM_170697|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2
hg18_v1_chr2_-_39201631_39201695	0.164503	SOX2.p2	AK290228|SOS1|6654|son of sevenless homolog 1 (Drosophila)
hg18_v1_chr5_+_148711419_148711529	0.164497	SOX2.p2	AK091237|GRPEL2|134266|GrpE-like 2, mitochondrial (E. coli)
hg18_v1_chr3_-_47932479_47932615	0.164418	SOX2.p2	
hg18_v1_chr1_-_178100204_178100211	0.164313	SOX2.p2	
hg18_v1_chr1_-_45924770_45924888	0.164179	SOX2.p2	BC068578|GPBP1L1|60313|GC-rich promoter binding protein 1-like 1	NM_021639|GPBP1L1|60313|GC-rich promoter binding protein 1-like 1
hg18_v1_chr14_-_87529222_87529403	0.163527	SOX2.p2	D25283|GALC|2581|galactosylceramidase	D25284|GALC|2581|galactosylceramidase	AK296530|GALC|2581|galactosylceramidase	L23116|GALC|2581|galactosylceramidase	AK294040|GALC|2581|galactosylceramidase
hg18_v1_chr7_+_106897737_106897740	0.163457	SOX2.p2	NM_005295|GPR22|2845|G protein-coupled receptor 22	AK122621|GPR22|2845|G protein-coupled receptor 22	AK307393|GPR22|2845|G protein-coupled receptor 22
hg18_v1_chr3_+_70068440_70068563	0.163321	SOX2.p2	NM_000248|MITF|4286|microphthalmia-associated transcription factor	NM_001184968|MITF|4286|microphthalmia-associated transcription factor	NM_198158|MITF|4286|microphthalmia-associated transcription factor	NM_198178|MITF|4286|microphthalmia-associated transcription factor	Z29678|MITF|4286|microphthalmia-associated transcription factor	BC012503|MITF|4286|microphthalmia-associated transcription factor	BC065243|MITF|4286|microphthalmia-associated transcription factor	BC026961|MITF|4286|microphthalmia-associated transcription factor	GU355676|MITF|4286|microphthalmia-associated transcription factor
hg18_v1_chr1_+_945472_945544	0.163059	SOX2.p2	AF016903|AGRN|375790|agrin	U84406|AGRN|375790|agrin
hg18_v1_chr1_+_43539239_43539329	0.162738	SOX2.p2	AK307639|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	BC038239|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	NM_005424|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	AK300399|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	AK225560|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	AF217976|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	AK300623|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	X60957|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	EU826586|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	EU826587|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	EU826588|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	EU826589|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	EU826590|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1
hg18_v1_chr15_-_68128924_68129002	0.162386	SOX2.p2	BC015421|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)
hg18_v1_chr1_+_157408000_157408179	0.162325	SOX2.p2	AK289541|CADM3|57863|cell adhesion molecule 3	NM_021189|CADM3|57863|cell adhesion molecule 3	AK308915|CADM3|57863|cell adhesion molecule 3	CR605082|CADM3|57863|cell adhesion molecule 3	NM_001127173|CADM3|57863|cell adhesion molecule 3	AF363367|CADM3|57863|cell adhesion molecule 3	AY358332|CADM3|57863|cell adhesion molecule 3	AF062733|CADM3|57863|cell adhesion molecule 3	BC033819|CADM3|57863|cell adhesion molecule 3	AY046418|CADM3|57863|cell adhesion molecule 3	AF529206|CADM3|57863|cell adhesion molecule 3	DQ890848|CADM3|57863|cell adhesion molecule 3	DQ894002|CADM3|57863|cell adhesion molecule 3
hg18_v1_chr16_-_47873183_47873287	0.161374	SOX2.p2	M58583|CBLN1|869|cerebellin 1 precursor	AK314276|CBLN1|869|cerebellin 1 precursor	NM_004352|CBLN1|869|cerebellin 1 precursor
hg18_v1_chr18_-_22699650_22699717	0.16123	SOX2.p2	AB128929|AQP4|361|aquaporin 4	BC022286|AQP4|361|aquaporin 4	D63412|AQP4|361|aquaporin 4	AB209156|AQP4|361|aquaporin 4	AK295069|AQP4|361|aquaporin 4	U63622|AQP4|361|aquaporin 4	NM_001650|AQP4|361|aquaporin 4	AK222684|AQP4|361|aquaporin 4
hg18_v1_chr12_-_121551424_121551519	0.160907	SOX2.p2	AK027702|ZCCHC8|55596|zinc finger, CCHC domain containing 8	AK074638|ZCCHC8|55596|zinc finger, CCHC domain containing 8	NM_017612|ZCCHC8|55596|zinc finger, CCHC domain containing 8
hg18_v1_chr1_-_232810478_232810484	0.16024	SOX2.p2	
hg18_v1_chr1_-_200182090_200182313	0.160208	SOX2.p2	AK126474|LMOD1|25802|leiomodin 1 (smooth muscle)	BC001755|LMOD1|25802|leiomodin 1 (smooth muscle)	X54162|LMOD1|25802|leiomodin 1 (smooth muscle)	AK304852|LMOD1|25802|leiomodin 1 (smooth muscle)	BC080187|LMOD1|25802|leiomodin 1 (smooth muscle)	AK295824|LMOD1|25802|leiomodin 1 (smooth muscle)
hg18_v1_chr5_+_95092384_95092865	0.160148	SOX2.p2	BC047884|RHOBTB3|22836|Rho-related BTB domain containing 3	NM_014899|RHOBTB3|22836|Rho-related BTB domain containing 3	CR596551|RHOBTB3|22836|Rho-related BTB domain containing 3	BC020231|RHOBTB3|22836|Rho-related BTB domain containing 3	BC013169|RHOBTB3|22836|Rho-related BTB domain containing 3	BC041337|RHOBTB3|22836|Rho-related BTB domain containing 3	AB020685|RHOBTB3|22836|Rho-related BTB domain containing 3	AK290034|RHOBTB3|22836|Rho-related BTB domain containing 3
hg18_v1_chr16_+_64958086_64958120	0.16011	SOX2.p2	AK300461|CDH5|1003|cadherin 5, type 2 (vascular endothelium)	X59796|CDH5|1003|cadherin 5, type 2 (vascular endothelium)	AK300299|CDH5|1003|cadherin 5, type 2 (vascular endothelium)	AB209908|CDH5|1003|cadherin 5, type 2 (vascular endothelium)	AB035304|CDH5|1003|cadherin 5, type 2 (vascular endothelium)	BC096363|CDH5|1003|cadherin 5, type 2 (vascular endothelium)	BC096364|CDH5|1003|cadherin 5, type 2 (vascular endothelium)	BC096365|CDH5|1003|cadherin 5, type 2 (vascular endothelium)	BC117520|CDH5|1003|cadherin 5, type 2 (vascular endothelium)
hg18_v1_chr6_+_167445284_167445284	0.1601	SOX2.p2	NM_004367|CCR6|1235|chemokine (C-C motif) receptor 6
hg18_v1_chr7_-_86433139_86433226	0.159968	SOX2.p2	AK296250|KIAA1324L|222223|KIAA1324-like	NM_152748|KIAA1324L|222223|KIAA1324-like
hg18_v1_chr8_-_93099040_93099083	0.159915	SOX2.p2	D14289|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_175636|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg18_v1_chr12_-_43593977_43593977	0.159601	SOX2.p2	AK295125|NELL2|4753|NEL-like 2 (chicken)	NM_001145110|NELL2|4753|NEL-like 2 (chicken)
hg18_v1_chr3_-_71262426_71262435	0.15955	SOX2.p2	AK297649|FOXP1|27086|forkhead box P1	BX647682|FOXP1|27086|forkhead box P1
hg18_v1_chr21_-_33107813_33107922	0.159379	SOX2.p2	BC069689|C21orf62|56245|chromosome 21 open reading frame 62	BC069709|C21orf62|56245|chromosome 21 open reading frame 62	BC069766|C21orf62|56245|chromosome 21 open reading frame 62	BC069779|C21orf62|56245|chromosome 21 open reading frame 62	AF231922|C21orf62|56245|chromosome 21 open reading frame 62	AK290983|C21orf62|56245|chromosome 21 open reading frame 62	DQ656042|C21orf62|56245|chromosome 21 open reading frame 62	NM_001162495|C21orf62|56245|chromosome 21 open reading frame 62	NM_001162496|C21orf62|56245|chromosome 21 open reading frame 62	NM_019596|C21orf62|56245|chromosome 21 open reading frame 62
hg18_v1_chr12_-_47869134_47869153	0.159364	SOX2.p2	CR593163|TUBA1A|7846|tubulin, alpha 1a	CR592605|TUBA1A|7846|tubulin, alpha 1a
hg18_v1_chr2_+_108571177_108571199	0.159262	SOX2.p2	NM_004987|LIMS1|3987|LIM and senescent cell antigen-like domains 1	U09284|LIMS1|3987|LIM and senescent cell antigen-like domains 1
hg18_v1_chr1_-_240228987_240229007	0.159138	SOX2.p2	BC132986|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma	BC132988|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma	AF276659|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma	BC127722|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma	NM_001004343|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma
hg18_v1_chr21_+_39099717_39099777	0.159064	SOX2.p2	NM_005239|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)	BC042954|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)	AK315563|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)	BC017040|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)
hg18_v1_chr11_-_4555625_4555626	0.159059	SOX2.p2	AF439154|C11orf40|143501|chromosome 11 open reading frame 40	NM_144663|C11orf40|143501|chromosome 11 open reading frame 40
hg18_v1_chr1_-_156923111_156923129	0.158704	SOX2.p2	M61877|SPTA1|6708|spectrin, alpha, erythrocytic 1 (elliptocytosis 2)	NM_003126|SPTA1|6708|spectrin, alpha, erythrocytic 1 (elliptocytosis 2)
hg18_v1_chr2_-_74634569_74634595	0.158548	SOX2.p2	AF311313|LOXL3|84695|lysyl oxidase-like 3	NM_032603|LOXL3|84695|lysyl oxidase-like 3	AF284815|LOXL3|84695|lysyl oxidase-like 3	AF282619|LOXL3|84695|lysyl oxidase-like 3	AK309474|LOXL3|84695|lysyl oxidase-like 3
hg18_v1_chr7_+_93862137_93862278	0.158436	SOX2.p2	AK297786|COL1A2|1278|collagen, type I, alpha 2	AK223175|COL1A2|1278|collagen, type I, alpha 2	AK300194|COL1A2|1278|collagen, type I, alpha 2	Z74616|COL1A2|1278|collagen, type I, alpha 2	AK226074|COL1A2|1278|collagen, type I, alpha 2	BC042586|COL1A2|1278|collagen, type I, alpha 2	BC054498|COL1A2|1278|collagen, type I, alpha 2	AF221550|PLAG1|5324|pleiomorphic adenoma gene 1	Y00724|COL1A2|1278|collagen, type I, alpha 2
hg18_v1_chr4_+_78297418_78297550	0.158279	SOX2.p2	U47414|CCNG2|901|cyclin G2
hg18_v1_chr17_+_23723220_23723252	0.158231	SOX2.p2	BC040429|SARM1|23098|sterile alpha and TIR motif containing 1	AJ290445|SARM1|23098|sterile alpha and TIR motif containing 1	BC122860|SARM1|23098|sterile alpha and TIR motif containing 1
hg18_v1_chr1_-_241484963_241484995	0.158092	SOX2.p2	AK296812|CEP170|9859|centrosomal protein 170kDa	AK299552|CEP170|9859|centrosomal protein 170kDa
hg18_v1_chr5_+_40877053_40877346	0.157456	SOX2.p2	AF356193|CARD6|84674|caspase recruitment domain family, member 6	AY196783|CARD6|84674|caspase recruitment domain family, member 6	NM_032587|CARD6|84674|caspase recruitment domain family, member 6	BC093825|CARD6|84674|caspase recruitment domain family, member 6	AK304349|CARD6|84674|caspase recruitment domain family, member 6	AB209844|CARD6|84674|caspase recruitment domain family, member 6
hg18_v1_chr10_-_76538859_76538981	0.157339	SOX2.p2	BC009778|DUSP13|51207|dual specificity phosphatase 13	AY040091|DUSP13|51207|dual specificity phosphatase 13	AK057012|DUSP13|51207|dual specificity phosphatase 13	AY674051|DUSP13|51207|dual specificity phosphatase 13	AK291897|DUSP13|51207|dual specificity phosphatase 13	AK300679|DUSP13|51207|dual specificity phosphatase 13	AK127886|DUSP13|51207|dual specificity phosphatase 13	NM_001007271|DUSP13|51207|dual specificity phosphatase 13	NM_001007272|DUSP13|51207|dual specificity phosphatase 13	NM_001007273|DUSP13|51207|dual specificity phosphatase 13	AK291891|DUSP13|51207|dual specificity phosphatase 13
hg18_v1_chr8_-_102872372_102872380	0.157297	SOX2.p2	AK055073|NCALD|83988|neurocalcin delta	AK314523|NCALD|83988|neurocalcin delta
hg18_v1_chr1_-_31311140_31311218	0.156938	SOX2.p2	NM_001020658|PUM1|9698|pumilio homolog 1 (Drosophila)	NM_014676|PUM1|9698|pumilio homolog 1 (Drosophila)	AK294477|PUM1|9698|pumilio homolog 1 (Drosophila)
hg18_v1_chrX_+_100692071_100692244	0.156751	SOX2.p2	AB039670|ARMCX1|51309|armadillo repeat containing, X-linked 1	NM_016608|ARMCX1|51309|armadillo repeat containing, X-linked 1	CR749609|ARMCX1|51309|armadillo repeat containing, X-linked 1	AK222578|ARMCX1|51309|armadillo repeat containing, X-linked 1	CR616090|ARMCX1|51309|armadillo repeat containing, X-linked 1	AK074785|ARMCX1|51309|armadillo repeat containing, X-linked 1	BC002691|ARMCX1|51309|armadillo repeat containing, X-linked 1	AF248963|ARMCX1|51309|armadillo repeat containing, X-linked 1
hg18_v1_chr1_-_41399632_41399690	0.156684	SOX2.p2	BC009752|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)	NM_001031694|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)
hg18_v1_chr9_+_18464138_18464228	0.156497	SOX2.p2	AK291956|ADAMTSL1|92949|ADAMTS-like 1	BC030262|ADAMTSL1|92949|ADAMTS-like 1	AF176313|ADAMTSL1|92949|ADAMTS-like 1
hg18_v1_chr1_-_232810443_232810465	0.156438	SOX2.p2	
hg18_v1_chr1_+_36121382_36121399	0.156436	SOX2.p2	AF093097|EIF2C1|26523|eukaryotic translation initiation factor 2C, 1	NM_012199|EIF2C1|26523|eukaryotic translation initiation factor 2C, 1
hg18_v1_chr5_-_36337756_36337767	0.15582	SOX2.p2	BC017951|RANBP3L|202151|RAN binding protein 3-like	AK058151|RANBP3L|202151|RAN binding protein 3-like	AK302947|RANBP3L|202151|RAN binding protein 3-like	BC047660|RANBP3L|202151|RAN binding protein 3-like	NM_001161429|RANBP3L|202151|RAN binding protein 3-like	NM_145000|RANBP3L|202151|RAN binding protein 3-like
hg18_v1_chr15_+_54998264_54998321	0.155496	SOX2.p2	M83233|TCF12|6938|transcription factor 12
hg18_v1_chr13_-_38510183_38510220	0.154908	SOX2.p2	AK074360|C13orf23|80209|chromosome 13 open reading frame 23	AB107354|C13orf23|80209|chromosome 13 open reading frame 23
hg18_v1_chr7_+_73136042_73136082	0.154386	SOX2.p2	AK290162|LIMK1|3984|LIM domain kinase 1
hg18_v1_chr17_-_36232366_36232396	0.154351	SOX2.p2	J04029|KRT10|3858|keratin 10	DQ893356|KRT10|3858|keratin 10	DQ896675|KRT10|3858|keratin 10	BC034697|KRT10|3858|keratin 10	NM_000421|KRT10|3858|keratin 10
hg18_v1_chr9_+_124836666_124836666	0.154136	SOX2.p2	BC066885|GPR21|2844|G protein-coupled receptor 21	BC066886|GPR21|2844|G protein-coupled receptor 21	BC067532|GPR21|2844|G protein-coupled receptor 21	BC067533|GPR21|2844|G protein-coupled receptor 21	BC067534|GPR21|2844|G protein-coupled receptor 21	NM_005294|GPR21|2844|G protein-coupled receptor 21
hg18_v1_chr7_+_129771865_129771936	0.153921	SOX2.p2	NM_001127441|CPA5|93979|carboxypeptidase A5	NM_001127442|CPA5|93979|carboxypeptidase A5	NM_080385|CPA5|93979|carboxypeptidase A5	AK093288|CPA5|93979|carboxypeptidase A5	AK315256|CPA5|93979|carboxypeptidase A5	BC039362|CPA5|93979|carboxypeptidase A5	AY155230|CPA5|93979|carboxypeptidase A5	BC053681|CPA5|93979|carboxypeptidase A5	BC042996|CPA5|93979|carboxypeptidase A5	AK131191|CPA5|93979|carboxypeptidase A5	AY155229|CPA5|93979|carboxypeptidase A5
hg18_v1_chr5_+_140767953_140767953	0.153771	SOX2.p2	AF152335|PCDHGB6|56100|protocadherin gamma subfamily B, 6	AF152522|PCDHGB6|56100|protocadherin gamma subfamily B, 6	NM_018926|PCDHGB6|56100|protocadherin gamma subfamily B, 6	NM_032100|PCDHGB6|56100|protocadherin gamma subfamily B, 6
hg18_v1_chr15_+_61583826_61583845	0.153384	SOX2.p2	AK314223|USP3|9960|ubiquitin specific peptidase 3
hg18_v1_chrX_-_153252775_153252844	0.15315	SOX2.p2	AB191259|FLNA|2316|filamin A, alpha	AB371575|FLNA|2316|filamin A, alpha	AB371577|FLNA|2316|filamin A, alpha	AB371578|FLNA|2316|filamin A, alpha	AB371579|FLNA|2316|filamin A, alpha	AB191260|FLNA|2316|filamin A, alpha	AB371574|FLNA|2316|filamin A, alpha	AB371576|FLNA|2316|filamin A, alpha	AK090427|FLNA|2316|filamin A, alpha
hg18_v1_chr15_+_74416129_74416154	0.152924	SOX2.p2	CR610026|ISL2|64843|ISL LIM homeobox 2
hg18_v1_chr9_-_14769530_14769530	0.152434	SOX2.p2	BC031064|FREM1|158326|FRAS1 related extracellular matrix 1	NM_001177704|FREM1|158326|FRAS1 related extracellular matrix 1
hg18_v1_chr11_+_113280727_113280865	0.152346	SOX2.p2	AK314268|HTR3B|9177|5-hydroxytryptamine (serotonin) receptor 3B	AF169255|HTR3B|9177|5-hydroxytryptamine (serotonin) receptor 3B	AF080582|HTR3B|9177|5-hydroxytryptamine (serotonin) receptor 3B	NM_006028|HTR3B|9177|5-hydroxytryptamine (serotonin) receptor 3B
hg18_v1_chr13_-_40491491_40491507	0.15232	SOX2.p2	NM_172373|ELF1|1997|E74-like factor 1 (ets domain transcription factor)
hg18_v1_chr10_+_6284845_6284919	0.152273	SOX2.p2	NM_004566|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3	L77662|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3	AK291263|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3	BC040482|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3	AF056320|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
hg18_v1_chr1_+_149299490_149299497	0.152093	SOX2.p2	BC009624|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11
hg18_v1_chr3_-_71262405_71262422	0.151347	SOX2.p2	AK027264|FOXP1|27086|forkhead box P1
hg18_v1_chr19_-_1062972_1063003	0.151247	SOX2.p2	BC106021|SBNO2|22904|strawberry notch homolog 2 (Drosophila)
hg18_v1_chr10_+_74323344_74323535	0.151096	SOX2.p2	AK096435|OIT3|170392|oncoprotein induced transcript 3	NM_152635|OIT3|170392|oncoprotein induced transcript 3	BC126440|OIT3|170392|oncoprotein induced transcript 3	AY358339|OIT3|170392|oncoprotein induced transcript 3	AY013707|OIT3|170392|oncoprotein induced transcript 3
hg18_v1_chr12_-_121551349_121551411	0.151006	SOX2.p2	BC065918|ZCCHC8|55596|zinc finger, CCHC domain containing 8
hg18_v1_chr6_+_134800533_134800550	0.150962	SOX2.p2	AK055166|LOC154092|154092|hypothetical LOC154092
hg18_v1_chr5_+_140146059_140146059	0.15023	SOX2.p2	AF152305|PCDHA1|56147|protocadherin alpha 1	AF152479|PCDHA1|56147|protocadherin alpha 1	AF169695|PCDHA1|56147|protocadherin alpha 1	NM_018900|PCDHA1|56147|protocadherin alpha 1	NM_031410|PCDHA1|56147|protocadherin alpha 1	NM_031411|PCDHA1|56147|protocadherin alpha 1
hg18_v1_chr3_+_173954940_173955053	0.15021	SOX2.p2	BC112086|ECT2|1894|epithelial cell transforming sequence 2 oncogene	AK023267|ECT2|1894|epithelial cell transforming sequence 2 oncogene	NM_018098|ECT2|1894|epithelial cell transforming sequence 2 oncogene	DQ847274|ECT2|1894|epithelial cell transforming sequence 2 oncogene
hg18_v1_chr1_-_143708467_143708467	0.149948	SOX2.p2	NM_001195260|PDE4DIP|9659|phosphodiesterase 4D interacting protein
hg18_v1_chr1_+_36121400_36121402	0.149867	SOX2.p2	BC063275|EIF2C1|26523|eukaryotic translation initiation factor 2C, 1
hg18_v1_chr5_+_179092405_179092511	0.149717	SOX2.p2	D83785|MAML1|9794|mastermind-like 1 (Drosophila)	NM_014757|MAML1|9794|mastermind-like 1 (Drosophila)	AB209135|MAML1|9794|mastermind-like 1 (Drosophila)	BC047937|MAML1|9794|mastermind-like 1 (Drosophila)
hg18_v1_chr1_+_90233238_90233371	0.149668	SOX2.p2	NM_182975|ZNF326|284695|zinc finger protein 326	NM_182976|ZNF326|284695|zinc finger protein 326	BC052645|ZNF326|284695|zinc finger protein 326	BC061521|ZNF326|284695|zinc finger protein 326	BC038454|ZNF326|284695|zinc finger protein 326	BC090866|ZNF326|284695|zinc finger protein 326	AK000410|ZNF326|284695|zinc finger protein 326	BC053888|ZNF326|284695|zinc finger protein 326	BC014899|ZNF326|284695|zinc finger protein 326	BC070341|ZNF326|284695|zinc finger protein 326	BC013102|ZNF326|284695|zinc finger protein 326	AK303707|ZNF326|284695|zinc finger protein 326	AK297073|ZNF326|284695|zinc finger protein 326
hg18_v1_chr11_-_5232480_5232620	0.149299	SOX2.p2	AF110493|HBG2|3048|hemoglobin, gamma G	X55656|HBG2|3048|hemoglobin, gamma G	DQ892665|HBG1|3047|hemoglobin, gamma A	DQ892801|HBG1|3047|hemoglobin, gamma A	DQ895909|HBG2|3048|hemoglobin, gamma G	DQ896048|HBG1|3047|hemoglobin, gamma A	M15386|HBG2|3048|hemoglobin, gamma G	CR596479|HBG1|3047|hemoglobin, gamma A	CR602897|HBG2|3048|hemoglobin, gamma G	CR599317|HBG2|3048|hemoglobin, gamma G	CR594576|HBG2|3048|hemoglobin, gamma G	CR593826|HBG2|3048|hemoglobin, gamma G	CR594720|HBG1|3047|hemoglobin, gamma A	CR603041|HBG2|3048|hemoglobin, gamma G	CR609411|HBG1|3047|hemoglobin, gamma A	CR613701|HBG2|3048|hemoglobin, gamma G	CR620360|HBG1|3047|hemoglobin, gamma A	CR593382|HBG1|3047|hemoglobin, gamma A	CR607395|HBG2|3048|hemoglobin, gamma G	CR608786|HBG1|3047|hemoglobin, gamma A	CR610392|HBG2|3048|hemoglobin, gamma G	CR615907|HBG2|3048|hemoglobin, gamma G	CR619879|HBG1|3047|hemoglobin, gamma A	CR626466|HBG1|3047|hemoglobin, gamma A	CR595029|HBG2|3048|hemoglobin, gamma G	CR604256|HBG1|3047|hemoglobin, gamma A	CR593022|HBG2|3048|hemoglobin, gamma G	CR593470|HBG2|3048|hemoglobin, gamma G	CR595535|HBG2|3048|hemoglobin, gamma G	CR602719|HBG2|3048|hemoglobin, gamma G	CR604223|HBG2|3048|hemoglobin, gamma G	CR609361|HBG2|3048|hemoglobin, gamma G	CR613883|HBG2|3048|hemoglobin, gamma G	CR614139|HBG1|3047|hemoglobin, gamma A	CR619706|HBG1|3047|hemoglobin, gamma A	CR619938|HBG1|3047|hemoglobin, gamma A	CR622267|HBG1|3047|hemoglobin, gamma A	CR625875|HBG1|3047|hemoglobin, gamma A	CR626236|HBG1|3047|hemoglobin, gamma A	CR626417|HBG1|3047|hemoglobin, gamma A	CR621032|HBG1|3047|hemoglobin, gamma A	CR593357|HBG2|3048|hemoglobin, gamma G	BC130457|HBG2|3048|hemoglobin, gamma G	BC130459|HBG2|3048|hemoglobin, gamma G	AK290492|HBG2|3048|hemoglobin, gamma G	BC010914|HBG1|3047|hemoglobin, gamma A	BC020719|HBG1|3047|hemoglobin, gamma A	NM_000184|HBG2|3048|hemoglobin, gamma G	BC029387|HBG2|3048|hemoglobin, gamma G	CR608640|HBG1|3047|hemoglobin, gamma A
hg18_v1_chr11_-_123816190_123816263	0.149213	SOX2.p2	AF238488|OR8B8|26493|olfactory receptor, family 8, subfamily B, member 8	NM_012378|OR8B8|26493|olfactory receptor, family 8, subfamily B, member 8	BC130393|OR8B8|26493|olfactory receptor, family 8, subfamily B, member 8	BC130419|OR8B8|26493|olfactory receptor, family 8, subfamily B, member 8
hg18_v1_chr15_+_63609791_63609893	0.148899	SOX2.p2	AK074898|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	AK299234|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	AF161470|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	BC058912|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	NM_016395|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	BC035508|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	BC047685|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	BC009056|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	AK225120|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1
hg18_v1_chr10_+_70150936_70151043	0.148377	SOX2.p2	AF465616|CCAR1|55749|cell division cycle and apoptosis regulator 1	AK023438|CCAR1|55749|cell division cycle and apoptosis regulator 1	NM_018237|CCAR1|55749|cell division cycle and apoptosis regulator 1	AK307550|CCAR1|55749|cell division cycle and apoptosis regulator 1	AK298004|CCAR1|55749|cell division cycle and apoptosis regulator 1	BC058846|CCAR1|55749|cell division cycle and apoptosis regulator 1	AK001701|CCAR1|55749|cell division cycle and apoptosis regulator 1	AY249140|CCAR1|55749|cell division cycle and apoptosis regulator 1	AK122871|CCAR1|55749|cell division cycle and apoptosis regulator 1	AK292649|CCAR1|55749|cell division cycle and apoptosis regulator 1	AK299307|CCAR1|55749|cell division cycle and apoptosis regulator 1	AK307704|CCAR1|55749|cell division cycle and apoptosis regulator 1	AK307671|CCAR1|55749|cell division cycle and apoptosis regulator 1	BX647943|CCAR1|55749|cell division cycle and apoptosis regulator 1	BC130626|CCAR1|55749|cell division cycle and apoptosis regulator 1	BC132725|CCAR1|55749|cell division cycle and apoptosis regulator 1	BC144118|CCAR1|55749|cell division cycle and apoptosis regulator 1	BC108682|CCAR1|55749|cell division cycle and apoptosis regulator 1
hg18_v1_chr17_+_8154280_8154325	0.148119	SOX2.p2	NM_173728|ARHGEF15|22899|Rho guanine nucleotide exchange factor (GEF) 15	AK291626|ARHGEF15|22899|Rho guanine nucleotide exchange factor (GEF) 15	AK023853|ARHGEF15|22899|Rho guanine nucleotide exchange factor (GEF) 15	BC036749|ARHGEF15|22899|Rho guanine nucleotide exchange factor (GEF) 15
hg18_v1_chr5_+_78568094_78568227	0.148086	SOX2.p2	
hg18_v1_chr17_+_23723180_23723191	0.14759	SOX2.p2	AY444166|SARM1|23098|sterile alpha and TIR motif containing 1
hg18_v1_chr12_-_3732478_3732580	0.147369	SOX2.p2	BC004524|EFCAB4B|84766|EF-hand calcium binding domain 4B	AK304017|EFCAB4B|84766|EF-hand calcium binding domain 4B
hg18_v1_chr1_-_54644269_54644483	0.14723	SOX2.p2	AK289474|SSBP3|23648|single stranded DNA binding protein 3	BC003605|SSBP3|23648|single stranded DNA binding protein 3	BC066365|SSBP3|23648|single stranded DNA binding protein 3	AF500116|SSBP3|23648|single stranded DNA binding protein 3
hg18_v1_chr1_-_25164061_25164198	0.147056	SOX2.p2	BC013362|RUNX3|864|runt-related transcription factor 3	AK310945|RUNX3|864|runt-related transcription factor 3	NM_001031680|RUNX3|864|runt-related transcription factor 3	AF022726|RUNX3|864|runt-related transcription factor 3
hg18_v1_chr10_+_35466715_35466769	0.146785	SOX2.p2	NM_183011|CREM|1390|cAMP responsive element modulator	NM_183012|CREM|1390|cAMP responsive element modulator
hg18_v1_chr18_+_70352779_70352843	0.146745	SOX2.p2	AK314572|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	AK098369|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	AK289916|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	AK303708|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	BC110295|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	AJ417564|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	BC113512|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	BC117122|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)
hg18_v1_chr11_+_46256161_46256238	0.146626	SOX2.p2	DQ895809|CREB3L1|90993|cAMP responsive element binding protein 3-like 1	EU176365|CREB3L1|90993|cAMP responsive element binding protein 3-like 1
hg18_v1_chr5_-_176833259_176833299	0.146598	SOX2.p2	NM_004395|DBN1|1627|drebrin 1
hg18_v1_chr6_-_25044156_25044168	0.146502	SOX2.p2	AK299047|FAM65B|9750|family with sequence similarity 65, member B
hg18_v1_chr2_+_3605611_3605640	0.146421	SOX2.p2	X74803|RPS7|6201|ribosomal protein S7
hg18_v1_chrX_-_73429101_73429159	0.146158	SOX2.p2	AK057701|MIR374AHG|100302692|mir-374a-545 cluster host gene (non-protein coding)
hg18_v1_chr4_-_95482994_95483049	0.146071	SOX2.p2	CR622166|HPGDS|27306|hematopoietic prostaglandin D synthase	CR619711|HPGDS|27306|hematopoietic prostaglandin D synthase	BC020734|HPGDS|27306|hematopoietic prostaglandin D synthase	AK290075|HPGDS|27306|hematopoietic prostaglandin D synthase	NM_014485|HPGDS|27306|hematopoietic prostaglandin D synthase
hg18_v1_chr4_+_170817787_170817873	0.145931	SOX2.p2	AK127483|CLCN3|1182|chloride channel 3
hg18_v1_chr4_+_41309482_41309560	0.145728	SOX2.p2	AK294774|LIMCH1|22998|LIM and calponin homology domains 1
hg18_v1_chr19_-_7604569_7604633	0.145644	SOX2.p2	BC038715|PCP2|126006|Purkinje cell protein 2	NM_174895|PCP2|126006|Purkinje cell protein 2	AK130855|PCP2|126006|Purkinje cell protein 2	BC025387|PCP2|126006|Purkinje cell protein 2
hg18_v1_chr12_+_111980044_111980102	0.14528	SOX2.p2	NM_004416|DTX1|1840|deltex homolog 1 (Drosophila)	BC048216|DTX1|1840|deltex homolog 1 (Drosophila)
hg18_v1_chr1_+_190811479_190811584	0.144543	SOX2.p2	NM_002922|RGS1|5996|regulator of G-protein signaling 1	AK303138|RGS1|5996|regulator of G-protein signaling 1	AK315607|RGS1|5996|regulator of G-protein signaling 1	AK093544|RGS1|5996|regulator of G-protein signaling 1	BC015510|RGS1|5996|regulator of G-protein signaling 1	X73427|RGS1|5996|regulator of G-protein signaling 1	AF493925|RGS1|5996|regulator of G-protein signaling 1	BT006668|RGS1|5996|regulator of G-protein signaling 1	DQ890651|RGS1|5996|regulator of G-protein signaling 1	DQ893831|RGS1|5996|regulator of G-protein signaling 1
hg18_v1_chr4_-_17415918_17416015	0.144364	SOX2.p2	BC050697|DCAF16|54876|DDB1 and CUL4 associated factor 16
hg18_v1_chr12_-_25041639_25041719	0.144247	SOX2.p2	BC035880|C12orf77|196415|chromosome 12 open reading frame 77	NM_001101339|C12orf77|196415|chromosome 12 open reading frame 77	BC046192|C12orf77|196415|chromosome 12 open reading frame 77	BC062789|C12orf77|196415|chromosome 12 open reading frame 77
hg18_v1_chr16_+_64958025_64958043	0.144214	SOX2.p2	NM_001795|CDH5|1003|cadherin 5, type 2 (vascular endothelium)
hg18_v1_chr22_+_25347927_25347935	0.144184	SOX2.p2	BC069404|CRYBA4|1413|crystallin, beta A4	CR456424|CRYBA4|1413|crystallin, beta A4	NM_001886|CRYBA4|1413|crystallin, beta A4	U59057|CRYBA4|1413|crystallin, beta A4	CU012985|CRYBA4|1413|crystallin, beta A4	CU013273|CRYBA4|1413|crystallin, beta A4	BC096171|CRYBA4|1413|crystallin, beta A4	BC096172|CRYBA4|1413|crystallin, beta A4	BC096173|CRYBA4|1413|crystallin, beta A4	BC096174|CRYBA4|1413|crystallin, beta A4
hg18_v1_chr1_-_31154023_31154247	0.14412	SOX2.p2	AF248634|SDC3|9672|syndecan 3	NM_014654|SDC3|9672|syndecan 3
hg18_v1_chr19_-_47498768_47498794	0.144043	SOX2.p2	NM_001145939|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)	NM_001145940|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)
hg18_v1_chr1_-_205161821_205162000	0.143855	SOX2.p2	BT006797|FAIM3|9214|Fas apoptotic inhibitory molecule 3	DQ890699|FAIM3|9214|Fas apoptotic inhibitory molecule 3	HM480394|FAIM3|9214|Fas apoptotic inhibitory molecule 3	AF057557|FAIM3|9214|Fas apoptotic inhibitory molecule 3	NM_001193338|FAIM3|9214|Fas apoptotic inhibitory molecule 3	GQ160900|FAIM3|9214|Fas apoptotic inhibitory molecule 3	GQ160901|FAIM3|9214|Fas apoptotic inhibitory molecule 3	CR625287|FAIM3|9214|Fas apoptotic inhibitory molecule 3	AK292007|FAIM3|9214|Fas apoptotic inhibitory molecule 3	AK297053|FAIM3|9214|Fas apoptotic inhibitory molecule 3	AK301187|FAIM3|9214|Fas apoptotic inhibitory molecule 3	AK316336|FAIM3|9214|Fas apoptotic inhibitory molecule 3	BC006401|FAIM3|9214|Fas apoptotic inhibitory molecule 3	NM_001142473|FAIM3|9214|Fas apoptotic inhibitory molecule 3	NM_005449|FAIM3|9214|Fas apoptotic inhibitory molecule 3
hg18_v1_chr13_+_94883853_94883858	0.143488	SOX2.p2	NM_001160100|CLDN10|9071|claudin 10	NM_182848|CLDN10|9071|claudin 10	AK055855|CLDN10|9071|claudin 10
hg18_v1_chr4_+_113372287_113372780	0.143365	SOX2.p2	NM_001128426|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	NM_018569|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AK310787|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	BX647702|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AL136628|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	BC009485|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AK315299|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AM392774|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AM393046|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AM393154|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AM393604|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AM393708|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	EU831660|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	EU831743|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein
hg18_v1_chr4_-_174687104_174687146	0.143271	SOX2.p2	BC101406|HAND2|9464|heart and neural crest derivatives expressed 2	BC101974|HAND2|9464|heart and neural crest derivatives expressed 2	BC109383|HAND2|9464|heart and neural crest derivatives expressed 2
hg18_v1_chr1_-_199259447_199259462	0.143129	SOX2.p2	AB007918|KIF21B|23046|kinesin family member 21B	NM_017596|KIF21B|23046|kinesin family member 21B
hg18_v1_chr3_-_46879883_46879976	0.143059	SOX2.p2	AF174483|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow	X07373|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow	M24122|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow	AK312044|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow	BC009790|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow	NM_000258|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow
hg18_v1_chrX_+_115215985_115216061	0.142981	SOX2.p2	AK313927|AGTR2|186|angiotensin II receptor, type 2	NM_000686|AGTR2|186|angiotensin II receptor, type 2	X87723|AGTR2|186|angiotensin II receptor, type 2	U16957|AGTR2|186|angiotensin II receptor, type 2
hg18_v1_chr14_-_104602784_104602803	0.142911	SOX2.p2	AF083955|GPR132|29933|G protein-coupled receptor 132	NM_013345|GPR132|29933|G protein-coupled receptor 132	EU543705|GPR132|29933|G protein-coupled receptor 132
hg18_v1_chr15_+_50098724_50098728	0.142857	SOX2.p2	CR749401|MAPK6|5597|mitogen-activated protein kinase 6
hg18_v1_chr7_-_107667728_107667849	0.14213	SOX2.p2	AJ001057|NRCAM|4897|neuronal cell adhesion molecule	NM_001037132|NRCAM|4897|neuronal cell adhesion molecule
hg18_v1_chr14_+_75141557_75141557	0.142094	SOX2.p2	AK297002|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2	NM_001195283|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2
hg18_v1_chr3_+_99733432_99733567	0.141915	SOX2.p2	AK313375|GPR15|2838|G protein-coupled receptor 15	BC101779|GPR15|2838|G protein-coupled receptor 15	BC101781|GPR15|2838|G protein-coupled receptor 15	BC069437|GPR15|2838|G protein-coupled receptor 15	NM_005290|GPR15|2838|G protein-coupled receptor 15
hg18_v1_chrX_+_30143595_30143636	0.141742	SOX2.p2	CR618499|MAGEB2|4113|melanoma antigen family B, 2	NM_002364|MAGEB2|4113|melanoma antigen family B, 2	AF015766|MAGEB2|4113|melanoma antigen family B, 2	AK313347|MAGEB2|4113|melanoma antigen family B, 2	BC026071|MAGEB2|4113|melanoma antigen family B, 2	AK223081|MAGEB2|4113|melanoma antigen family B, 2	CR618278|MAGEB2|4113|melanoma antigen family B, 2	CR621494|MAGEB2|4113|melanoma antigen family B, 2	CR590008|MAGEB2|4113|melanoma antigen family B, 2	CR593708|MAGEB2|4113|melanoma antigen family B, 2
hg18_v1_chr3_-_113842652_113842682	0.141697	SOX2.p2	AY548106|CCDC80|151887|coiled-coil domain containing 80	AY548107|CCDC80|151887|coiled-coil domain containing 80	BC110842|CCDC80|151887|coiled-coil domain containing 80	AY526612|CCDC80|151887|coiled-coil domain containing 80	NM_199511|CCDC80|151887|coiled-coil domain containing 80	NM_199512|CCDC80|151887|coiled-coil domain containing 80	AK304561|CCDC80|151887|coiled-coil domain containing 80
hg18_v1_chr12_-_7739591_7739655	0.14163	SOX2.p2	DQ892661|GDF3|9573|growth differentiation factor 3	DQ895901|GDF3|9573|growth differentiation factor 3	AF110641|GDF3|9573|growth differentiation factor 3	AF263538|GDF3|9573|growth differentiation factor 3	NM_020634|GDF3|9573|growth differentiation factor 3	BC030959|GDF3|9573|growth differentiation factor 3	AY358875|GDF3|9573|growth differentiation factor 3
hg18_v1_chr12_-_41164052_41164081	0.141459	SOX2.p2	NM_001144882|PRICKLE1|144165|prickle homolog 1 (Drosophila)	NM_001144883|PRICKLE1|144165|prickle homolog 1 (Drosophila)
hg18_v1_chr14_+_19761708_19761708	0.141328	SOX2.p2	NM_001004480|OR11H6|122748|olfactory receptor, family 11, subfamily H, member 6
hg18_v1_chr4_-_47709717_47709717	0.141063	SOX2.p2	AK292021|CNGA1|1259|cyclic nucleotide gated channel alpha 1	NM_000087|CNGA1|1259|cyclic nucleotide gated channel alpha 1
hg18_v1_chr19_+_10932583_10932709	0.14097	SOX2.p2	NM_001128844|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	NM_003072|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	AK290033|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	BC150298|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	BC139917|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	BC139924|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
hg18_v1_chr7_+_73136254_73136286	0.140963	SOX2.p2	AF134379|LIMK1|3984|LIM domain kinase 1
hg18_v1_chr9_-_14076901_14077003	0.140954	SOX2.p2	BX537698|NFIB|4781|nuclear factor I/B
hg18_v1_chr19_-_47790820_47790921	0.140802	SOX2.p2	DQ891971|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	DQ895161|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	X52378|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	AK297012|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	BC026263|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	D90064|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	M33326|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	AK312652|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	NM_001816|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8
hg18_v1_chr4_+_110968594_110968607	0.140652	SOX2.p2	AF012270|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog	NM_006583|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog	BC128120|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog	BC128121|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog	BC128401|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog
hg18_v1_chr12_-_41164010_41164041	0.140625	SOX2.p2	AK122881|PRICKLE1|144165|prickle homolog 1 (Drosophila)
hg18_v1_chr1_+_117345894_117345962	0.14056	SOX2.p2	AK307542|CD101|9398|CD101 molecule	NM_004258|CD101|9398|CD101 molecule	AK298237|CD101|9398|CD101 molecule	BC130327|CD101|9398|CD101 molecule	BC136484|CD101|9398|CD101 molecule	BC171768|CD101|9398|CD101 molecule	Z33642|CD101|9398|CD101 molecule
hg18_v1_chr8_+_1436938_1436975	0.140418	SOX2.p2	AF119818|DLGAP2|9228|discs, large (Drosophila) homolog-associated protein 2	AF119817|DLGAP2|9228|discs, large (Drosophila) homolog-associated protein 2	NM_004745|DLGAP2|9228|discs, large (Drosophila) homolog-associated protein 2
hg18_v1_chr9_+_115382990_115383028	0.140354	SOX2.p2	U27655|RGS3|5998|regulator of G-protein signaling 3	AK125094|RGS3|5998|regulator of G-protein signaling 3
hg18_v1_chr5_+_139008091_139008137	0.140327	SOX2.p2	BC006428|CXXC5|51523|CXXC finger protein 5	CR611313|CXXC5|51523|CXXC finger protein 5	CR614582|CXXC5|51523|CXXC finger protein 5
hg18_v1_chr20_-_33705244_33705244	0.140081	SOX2.p2	NM_003915|CPNE1|8904|copine I
hg18_v1_chr13_-_24643620_24643701	0.139961	SOX2.p2	AK098343|FAM123A|219287|family with sequence similarity 123A	BC032653|FAM123A|219287|family with sequence similarity 123A
hg18_v1_chr17_-_44022595_44022629	0.1395	SOX2.p2	AK315102|HOXB3|3213|homeobox B3	AK316245|HOXB3|3213|homeobox B3	AK291182|HOXB3|3213|homeobox B3
hg18_v1_chrX_-_153698930_153698991	0.138895	SOX2.p2	CR599156|HMGN1P37|728776|high-mobility group nucleosome binding domain 1 pseudogene 37	CR599799|HMGN1P37|728776|high-mobility group nucleosome binding domain 1 pseudogene 37	CR622902|HMGN1P37|728776|high-mobility group nucleosome binding domain 1 pseudogene 37	CR603215|HMGN1P37|728776|high-mobility group nucleosome binding domain 1 pseudogene 37
hg18_v1_chr17_+_23723113_23723156	0.138264	SOX2.p2	NM_015077|SARM1|23098|sterile alpha and TIR motif containing 1
hg18_v1_chr1_+_85819004_85819256	0.137863	SOX2.p2	CR622169|CYR61|3491|cysteine-rich, angiogenic inducer, 61	AK223385|CYR61|3491|cysteine-rich, angiogenic inducer, 61	AK295430|CYR61|3491|cysteine-rich, angiogenic inducer, 61	AK314571|CYR61|3491|cysteine-rich, angiogenic inducer, 61	NM_001554|CYR61|3491|cysteine-rich, angiogenic inducer, 61	CR593662|CYR61|3491|cysteine-rich, angiogenic inducer, 61	CR597890|CYR61|3491|cysteine-rich, angiogenic inducer, 61	CR623495|CYR61|3491|cysteine-rich, angiogenic inducer, 61	CR623693|CYR61|3491|cysteine-rich, angiogenic inducer, 61	BC016952|CYR61|3491|cysteine-rich, angiogenic inducer, 61	CR603266|CYR61|3491|cysteine-rich, angiogenic inducer, 61	Y12084|CYR61|3491|cysteine-rich, angiogenic inducer, 61	Z98053|CYR61|3491|cysteine-rich, angiogenic inducer, 61	Y11307|CYR61|3491|cysteine-rich, angiogenic inducer, 61	BC009199|CYR61|3491|cysteine-rich, angiogenic inducer, 61	U62015|CYR61|3491|cysteine-rich, angiogenic inducer, 61	CR595937|CYR61|3491|cysteine-rich, angiogenic inducer, 61	BC001271|CYR61|3491|cysteine-rich, angiogenic inducer, 61	AF003594|CYR61|3491|cysteine-rich, angiogenic inducer, 61	AF031385|CYR61|3491|cysteine-rich, angiogenic inducer, 61	DQ891262|CYR61|3491|cysteine-rich, angiogenic inducer, 61	DQ894449|CYR61|3491|cysteine-rich, angiogenic inducer, 61	CR536519|CYR61|3491|cysteine-rich, angiogenic inducer, 61
hg18_v1_chr1_-_31311073_31311136	0.13778	SOX2.p2	BC013398|PUM1|9698|pumilio homolog 1 (Drosophila)	D43951|PUM1|9698|pumilio homolog 1 (Drosophila)	AK291779|PUM1|9698|pumilio homolog 1 (Drosophila)	AK300457|PUM1|9698|pumilio homolog 1 (Drosophila)	AF315592|PUM1|9698|pumilio homolog 1 (Drosophila)	AK096476|PUM1|9698|pumilio homolog 1 (Drosophila)	AK222605|PUM1|9698|pumilio homolog 1 (Drosophila)
hg18_v1_chr7_+_120416103_120416161	0.137757	SOX2.p2	AL832638|C7orf58|79974|chromosome 7 open reading frame 58
hg18_v1_chr6_+_27215039_27215066	0.137183	SOX2.p2	BC016336|HIST1H4I|8294|histone cluster 1, H4i	CR599017|HIST1H4I|8294|histone cluster 1, H4i	BC075806|HIST1H4I|8294|histone cluster 1, H4i	BC066250|HIST1H4I|8294|histone cluster 1, H4i	BC067496|HIST1H4I|8294|histone cluster 1, H4i	BC067497|HIST1H4I|8294|histone cluster 1, H4i	NM_003495|HIST1H4I|8294|histone cluster 1, H4i
hg18_v1_chr14_-_80475636_80475636	0.137089	SOX2.p2	NM_152446|C14orf145|145508|chromosome 14 open reading frame 145
hg18_v1_chr13_-_98708549_98708682	0.137054	SOX2.p2	AF261135|GPR18|2841|G protein-coupled receptor 18	BC050646|GPR18|2841|G protein-coupled receptor 18	AF339781|GPR18|2841|G protein-coupled receptor 18	BC008569|GPR18|2841|G protein-coupled receptor 18	NM_001098200|GPR18|2841|G protein-coupled receptor 18	NM_005292|GPR18|2841|G protein-coupled receptor 18
hg18_v1_chr1_+_9634368_9634415	0.136997	SOX2.p2	AK314191|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide	NM_005026|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide	U86453|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide	Y10055|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide	BC030263|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide
hg18_v1_chr15_-_68781662_68781700	0.136785	SOX2.p2	BC016881|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats	AL834243|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats	NM_001008224|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats	AK055435|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats
hg18_v1_chr1_-_1701313_1701367	0.136748	SOX2.p2	AF250320|NADK|65220|NAD kinase	NM_001198994|NADK|65220|NAD kinase
hg18_v1_chr8_-_125648576_125648599	0.136692	SOX2.p2	AK126989|MTSS1|9788|metastasis suppressor 1
hg18_v1_chr4_-_140696740_140697026	0.136648	SOX2.p2	AF462150|SETD7|80854|SET domain containing (lysine methyltransferase) 7	BC066361|SETD7|80854|SET domain containing (lysine methyltransferase) 7	AK310856|SETD7|80854|SET domain containing (lysine methyltransferase) 7	BC121055|SETD7|80854|SET domain containing (lysine methyltransferase) 7	BC121056|SETD7|80854|SET domain containing (lysine methyltransferase) 7	AB051504|SETD7|80854|SET domain containing (lysine methyltransferase) 7	AF448510|SETD7|80854|SET domain containing (lysine methyltransferase) 7	NM_030648|SETD7|80854|SET domain containing (lysine methyltransferase) 7
hg18_v1_chr9_+_89302239_89302573	0.136403	SOX2.p2	AK296839|DAPK1|1612|death-associated protein kinase 1	AB208871|DAPK1|1612|death-associated protein kinase 1
hg18_v1_chr2_+_176737050_176737050	0.136201	SOX2.p2	BC005124|HOXD3|3232|homeobox D3	NM_006898|HOXD3|3232|homeobox D3
hg18_v1_chr5_-_111119846_111119846	0.136025	SOX2.p2	NM_001142483|C5orf13|9315|chromosome 5 open reading frame 13
hg18_v1_chr5_+_10406980_10407037	0.135867	SOX2.p2	
hg18_v1_chr12_-_91063441_91063803	0.13579	SOX2.p2	BT019839|BTG1|694|B-cell translocation gene 1, anti-proliferative	BT019840|BTG1|694|B-cell translocation gene 1, anti-proliferative	BT019841|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR456876|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR541782|BTG1|694|B-cell translocation gene 1, anti-proliferative	EU176394|BTG1|694|B-cell translocation gene 1, anti-proliferative	EU176740|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR590022|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR620161|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR595512|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR601264|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR609466|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR616928|BTG1|694|B-cell translocation gene 1, anti-proliferative	BC016759|BTG1|694|B-cell translocation gene 1, anti-proliferative	BC064953|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR617798|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR604248|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR604369|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR606339|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR609805|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR614716|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR615938|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR616550|BTG1|694|B-cell translocation gene 1, anti-proliferative	X61123|BTG1|694|B-cell translocation gene 1, anti-proliferative	AK313309|BTG1|694|B-cell translocation gene 1, anti-proliferative	AK307057|BTG1|694|B-cell translocation gene 1, anti-proliferative	NM_001731|BTG1|694|B-cell translocation gene 1, anti-proliferative
hg18_v1_chr14_+_73884918_73884927	0.135771	SOX2.p2	NM_018228|VRTN|55237|vertebrae development homolog (pig)
hg18_v1_chr17_-_70039187_70039207	0.135401	SOX2.p2	DQ893585|CD300LB|124599|CD300 molecule-like family member b	DQ896833|CD300LB|124599|CD300 molecule-like family member b	BC028091|CD300LB|124599|CD300 molecule-like family member b	AK290925|CD300LB|124599|CD300 molecule-like family member b	AK298665|CD300LB|124599|CD300 molecule-like family member b	NM_174892|CD300LB|124599|CD300 molecule-like family member b
hg18_v1_chr20_-_33658823_33658850	0.135277	SOX2.p2	BC029951|FER1L4|80307|fer-1-like 4 (C. elegans) pseudogene	AY461812|FER1L4|80307|fer-1-like 4 (C. elegans) pseudogene
hg18_v1_chr15_+_81906983_81907145	0.135241	SOX2.p2	AK309086|SH3GL3|6457|SH3-domain GRB2-like 3	NM_003027|SH3GL3|6457|SH3-domain GRB2-like 3	AK307442|SH3GL3|6457|SH3-domain GRB2-like 3	BC042864|SH3GL3|6457|SH3-domain GRB2-like 3
hg18_v1_chr12_-_16652202_16652290	0.135158	SOX2.p2	AF258348|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	BC017777|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	AB044746|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	AK095595|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	AK308826|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	NM_001001395|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg18_v1_chr1_-_149213751_149213773	0.134547	SOX2.p2	BC010032|LASS2|29956|LAG1 homolog, ceramide synthase 2
hg18_v1_chr7_+_44762311_44762373	0.134467	SOX2.p2	NM_174929|ZMIZ2|83637|zinc finger, MIZ-type containing 2	BC131780|ZMIZ2|83637|zinc finger, MIZ-type containing 2	BC016968|ZMIZ2|83637|zinc finger, MIZ-type containing 2	AY426594|ZMIZ2|83637|zinc finger, MIZ-type containing 2	AF357908|ZMIZ2|83637|zinc finger, MIZ-type containing 2
hg18_v1_chr13_-_38510246_38510261	0.13442	SOX2.p2	NM_025138|C13orf23|80209|chromosome 13 open reading frame 23	NM_170719|C13orf23|80209|chromosome 13 open reading frame 23
hg18_v1_chr9_-_73573121_73573675	0.134378	SOX2.p2	BC140773|TMEM2|23670|transmembrane protein 2	BC144510|TMEM2|23670|transmembrane protein 2	BC171782|TMEM2|23670|transmembrane protein 2	AB037833|TMEM2|23670|transmembrane protein 2	BC146780|TMEM2|23670|transmembrane protein 2	AF137030|TMEM2|23670|transmembrane protein 2	AK300405|TMEM2|23670|transmembrane protein 2	NM_001135820|TMEM2|23670|transmembrane protein 2	NM_013390|TMEM2|23670|transmembrane protein 2
hg18_v1_chr1_+_66570683_66570684	0.134338	SOX2.p2	AK294441|PDE4B|5142|phosphodiesterase 4B, cAMP-specific
hg18_v1_chr19_-_7896974_7897058	0.133927	SOX2.p2	BC062702|CTXN1|404217|cortexin 1	AK098834|CTXN1|404217|cortexin 1	NM_206833|CTXN1|404217|cortexin 1
hg18_v1_chr9_+_102275455_102275646	0.13382	SOX2.p2	BC035056|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1	DQ891732|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1	DQ894909|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1
hg18_v1_chr8_-_87824996_87825060	0.133737	SOX2.p2	BC150601|CNGB3|54714|cyclic nucleotide gated channel beta 3	AF272900|CNGB3|54714|cyclic nucleotide gated channel beta 3	NM_019098|CNGB3|54714|cyclic nucleotide gated channel beta 3
hg18_v1_chr10_-_113933457_113933534	0.13352	SOX2.p2	AL832464|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial	BC030783|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial	BX647451|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial	AL833061|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial	AL833093|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial	NM_020918|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial
hg18_v1_chr1_+_50348052_50348199	0.133397	SOX2.p2	AK298817|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	AK309653|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
hg18_v1_chr18_+_54682261_54682397	0.133323	SOX2.p2	BC036366|ZNF532|55205|zinc finger protein 532
hg18_v1_chr6_-_99957253_99957290	0.133274	SOX2.p2	CR623227|SFRS18|25957|splicing factor, arginine/serine-rich 18
hg18_v1_chr1_+_153302825_153302923	0.132883	SOX2.p2	NM_005227|EFNA4|1945|ephrin-A4	NM_182689|EFNA4|1945|ephrin-A4	NM_182690|EFNA4|1945|ephrin-A4	BC107483|EFNA4|1945|ephrin-A4	AJ006352|EFNA4|1945|ephrin-A4	AJ006353|EFNA4|1945|ephrin-A4	U14188|EFNA4|1945|ephrin-A4	CR533569|EFNA4|1945|ephrin-A4
hg18_v1_chr15_+_37330176_37330258	0.132677	SOX2.p2	BX647708|C15orf54|400360|chromosome 15 open reading frame 54	NM_207445|C15orf54|400360|chromosome 15 open reading frame 54	AK096850|C15orf54|400360|chromosome 15 open reading frame 54	BC137300|C15orf54|400360|chromosome 15 open reading frame 54	BC137301|C15orf54|400360|chromosome 15 open reading frame 54	BC171789|C15orf54|400360|chromosome 15 open reading frame 54
hg18_v1_chr5_-_156935317_156935449	0.132552	SOX2.p2	AF311317|ADAM19|8728|ADAM metallopeptidase domain 19	AF326918|ADAM19|8728|ADAM metallopeptidase domain 19	Y13786|ADAM19|8728|ADAM metallopeptidase domain 19	AK091464|ADAM19|8728|ADAM metallopeptidase domain 19	AK308182|ADAM19|8728|ADAM metallopeptidase domain 19	NM_033274|ADAM19|8728|ADAM metallopeptidase domain 19
hg18_v1_chr22_+_42900168_42900211	0.13238	SOX2.p2	NM_001137605|PARVG|64098|parvin, gamma	AK309348|PARVG|64098|parvin, gamma	AK293360|PARVG|64098|parvin, gamma
hg18_v1_chr6_-_89984214_89984214	0.132311	SOX2.p2	AK313609|GABRR1|2569|gamma-aminobutyric acid (GABA) receptor, rho 1	NM_002042|GABRR1|2569|gamma-aminobutyric acid (GABA) receptor, rho 1
hg18_v1_chr5_-_180175146_180175151	0.132077	SOX2.p2	AK057194|MGAT1|4245|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase
hg18_v1_chr5_-_98290117_98290139	0.131962	SOX2.p2	BC054860|CHD1|1105|chromodomain helicase DNA binding protein 1	BC117134|CHD1|1105|chromodomain helicase DNA binding protein 1	NM_001270|CHD1|1105|chromodomain helicase DNA binding protein 1	AF006513|CHD1|1105|chromodomain helicase DNA binding protein 1
hg18_v1_chr7_-_139523187_139523475	0.13189	SOX2.p2	AK131497|JHDM1D|80853|jumonji C domain containing histone demethylase 1 homolog D (S. cerevisiae)	NM_030647|JHDM1D|80853|jumonji C domain containing histone demethylase 1 homolog D (S. cerevisiae)
hg18_v1_chr3_+_9451506_9451527	0.131886	SOX2.p2	
hg18_v1_chr1_-_199657468_199657496	0.131785	SOX2.p2	AJ315823|TNNI1|7135|troponin I type 1 (skeletal, slow)	BC012601|TNNI1|7135|troponin I type 1 (skeletal, slow)	AK223588|TNNI1|7135|troponin I type 1 (skeletal, slow)	J04760|TNNI1|7135|troponin I type 1 (skeletal, slow)	AK311896|TNNI1|7135|troponin I type 1 (skeletal, slow)	AL831820|TNNI1|7135|troponin I type 1 (skeletal, slow)	AL831975|TNNI1|7135|troponin I type 1 (skeletal, slow)	BC012600|TNNI1|7135|troponin I type 1 (skeletal, slow)	BX510903|TNNI1|7135|troponin I type 1 (skeletal, slow)	NM_003281|TNNI1|7135|troponin I type 1 (skeletal, slow)
hg18_v1_chr11_-_20138445_20138445	0.131592	SOX2.p2	NM_001029865|DBX1|120237|developing brain homeobox 1
hg18_v1_chr12_+_14429499_14429579	0.131582	SOX2.p2	AK304184|ATF7IP|55729|activating transcription factor 7 interacting protein	BX648096|ATF7IP|55729|activating transcription factor 7 interacting protein
hg18_v1_chr22_+_42908102_42908189	0.131581	SOX2.p2	NM_022141|PARVG|64098|parvin, gamma	AK225929|PARVG|64098|parvin, gamma	AK307294|PARVG|64098|parvin, gamma	BC034406|PARVG|64098|parvin, gamma	AF237772|PARVG|64098|parvin, gamma
hg18_v1_chr7_+_73136085_73136098	0.131356	SOX2.p2	D26309|LIMK1|3984|LIM domain kinase 1	NM_002314|LIMK1|3984|LIM domain kinase 1
hg18_v1_chr11_-_55942283_55942283	0.131176	SOX2.p2	NM_001004744|OR5R1|219479|olfactory receptor, family 5, subfamily R, member 1
hg18_v1_chr15_-_62782512_62782532	0.130861	SOX2.p2	BC047755|OAZ2|4947|ornithine decarboxylase antizyme 2	NM_002537|OAZ2|4947|ornithine decarboxylase antizyme 2
hg18_v1_chr5_+_180726874_180726893	0.130677	SOX2.p2	BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3	BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3	NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29	NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3	NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16
hg18_v1_chr7_-_107930170_107930246	0.130632	SOX2.p2	BC005203|PNPLA8|50640|patatin-like phospholipase domain containing 8	AK002115|PNPLA8|50640|patatin-like phospholipase domain containing 8
hg18_v1_chr1_+_78888064_78888120	0.130625	SOX2.p2	NM_006417|IFI44|10561|interferon-induced protein 44	BC022870|IFI44|10561|interferon-induced protein 44	AK302527|IFI44|10561|interferon-induced protein 44	AK316476|IFI44|10561|interferon-induced protein 44	CR621445|IFI44|10561|interferon-induced protein 44
hg18_v1_chr5_-_95184221_95184464	0.130608	SOX2.p2	NM_001118890|GLRX|2745|glutaredoxin (thioltransferase)	NM_002064|GLRX|2745|glutaredoxin (thioltransferase)	CR593859|GLRX|2745|glutaredoxin (thioltransferase)
hg18_v1_chr1_+_246178701_246178782	0.130559	SOX2.p2	BC140751|OR2L8|391190|olfactory receptor, family 2, subfamily L, member 8	NM_001001963|OR2L8|391190|olfactory receptor, family 2, subfamily L, member 8
hg18_v1_chr1_+_116744992_116745102	0.13053	SOX2.p2	CR614469|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide
hg18_v1_chr21_-_33065849_33066042	0.13009	SOX2.p2	AY033903|GCFC1|94104|GC-rich sequence DNA-binding factor 1	AY033904|GCFC1|94104|GC-rich sequence DNA-binding factor 1	AY033905|GCFC1|94104|GC-rich sequence DNA-binding factor 1	AY033906|GCFC1|94104|GC-rich sequence DNA-binding factor 1	AJ279080|GCFC1|94104|GC-rich sequence DNA-binding factor 1	AJ279081|GCFC1|94104|GC-rich sequence DNA-binding factor 1	CR603496|GCFC1|94104|GC-rich sequence DNA-binding factor 1	AK309404|GCFC1|94104|GC-rich sequence DNA-binding factor 1	BC030539|GCFC1|94104|GC-rich sequence DNA-binding factor 1	BC084542|GCFC1|94104|GC-rich sequence DNA-binding factor 1	BC062992|GCFC1|94104|GC-rich sequence DNA-binding factor 1	NM_013329|GCFC1|94104|GC-rich sequence DNA-binding factor 1	NM_016631|GCFC1|94104|GC-rich sequence DNA-binding factor 1
hg18_v1_chr11_-_10787028_10787079	0.129847	SOX2.p2	AB209267|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	BC018746|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	AY513274|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	BC039851|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	U76111|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	U73824|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	BC043149|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	AK223548|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2
hg18_v1_chr7_-_92615593_92615620	0.12923	SOX2.p2	AF474973|SAMD9L|219285|sterile alpha motif domain containing 9-like	AY195582|SAMD9L|219285|sterile alpha motif domain containing 9-like	AY195583|SAMD9L|219285|sterile alpha motif domain containing 9-like	AY195584|SAMD9L|219285|sterile alpha motif domain containing 9-like	AY195585|SAMD9L|219285|sterile alpha motif domain containing 9-like	AY195586|SAMD9L|219285|sterile alpha motif domain containing 9-like	AY195587|SAMD9L|219285|sterile alpha motif domain containing 9-like	DQ068177|SAMD9L|219285|sterile alpha motif domain containing 9-like	AB095926|SAMD9L|219285|sterile alpha motif domain containing 9-like	NM_152703|SAMD9L|219285|sterile alpha motif domain containing 9-like
hg18_v1_chr6_+_89847019_89847181	0.12901	SOX2.p2	CR618392|PNRC1|10957|proline-rich nuclear receptor coactivator 1	NM_006813|PNRC1|10957|proline-rich nuclear receptor coactivator 1
hg18_v1_chr8_-_42742729_42742931	0.128763	SOX2.p2	Y16282|CHRNA6|8973|cholinergic receptor, nicotinic, alpha 6	BC014456|CHRNA6|8973|cholinergic receptor, nicotinic, alpha 6	NM_004198|CHRNA6|8973|cholinergic receptor, nicotinic, alpha 6	U62435|CHRNA6|8973|cholinergic receptor, nicotinic, alpha 6	AK298798|CHRNA6|8973|cholinergic receptor, nicotinic, alpha 6	AK313521|CHRNA6|8973|cholinergic receptor, nicotinic, alpha 6
hg18_v1_chr2_+_216695062_216695162	0.128356	SOX2.p2	AK026166|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)
hg18_v1_chr15_-_93671314_93671332	0.128206	SOX2.p2	BC040875|LOC400456|400456|hypothetical LOC400456
hg18_v1_chr6_+_89847183_89847332	0.128011	SOX2.p2	AK312665|PNRC1|10957|proline-rich nuclear receptor coactivator 1	AK130046|PNRC1|10957|proline-rich nuclear receptor coactivator 1	CR608318|PNRC1|10957|proline-rich nuclear receptor coactivator 1	CR593282|PNRC1|10957|proline-rich nuclear receptor coactivator 1	CR624105|PNRC1|10957|proline-rich nuclear receptor coactivator 1	CR590801|PNRC1|10957|proline-rich nuclear receptor coactivator 1	CR605107|PNRC1|10957|proline-rich nuclear receptor coactivator 1	CR603217|PNRC1|10957|proline-rich nuclear receptor coactivator 1	U03105|PNRC1|10957|proline-rich nuclear receptor coactivator 1	CR617909|PNRC1|10957|proline-rich nuclear receptor coactivator 1	CR595339|PNRC1|10957|proline-rich nuclear receptor coactivator 1	CR602604|PNRC1|10957|proline-rich nuclear receptor coactivator 1	BC018112|PNRC1|10957|proline-rich nuclear receptor coactivator 1	AY303779|PNRC1|10957|proline-rich nuclear receptor coactivator 1
hg18_v1_chr10_+_18589589_18589703	0.127723	SOX2.p2	NM_000724|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AB208917|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	U95019|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit
hg18_v1_chr4_+_155921876_155921949	0.127625	SOX2.p2	NM_144979|RBM46|166863|RNA binding motif protein 46	AK302720|RBM46|166863|RNA binding motif protein 46	BC028588|RBM46|166863|RNA binding motif protein 46
hg18_v1_chrX_-_47374647_47374647	0.127459	SOX2.p2	NM_002621|CFP|5199|complement factor properdin
hg18_v1_chr2_+_232281470_232281487	0.127446	SOX2.p2	CR612758|PTMA|5757|prothymosin, alpha	NM_001099285|PTMA|5757|prothymosin, alpha	NM_002823|PTMA|5757|prothymosin, alpha	BC022433|PTMA|5757|prothymosin, alpha	AK223605|PTMA|5757|prothymosin, alpha	AK314106|PTMA|5757|prothymosin, alpha	M14630|PTMA|5757|prothymosin, alpha	CR594103|PTMA|5757|prothymosin, alpha	BC034921|PTMA|5757|prothymosin, alpha
hg18_v1_chr1_-_149698516_149698594	0.127357	SOX2.p2	AJ242979|POGZ|23126|pogo transposable element with ZNF domain	BX537838|POGZ|23126|pogo transposable element with ZNF domain	NM_001194937|POGZ|23126|pogo transposable element with ZNF domain	NM_001194938|POGZ|23126|pogo transposable element with ZNF domain	NM_015100|POGZ|23126|pogo transposable element with ZNF domain	NM_145796|POGZ|23126|pogo transposable element with ZNF domain
hg18_v1_chr10_-_32707549_32707737	0.127305	SOX2.p2	AF286905|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)	AK309309|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)	AK299676|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)
hg18_v1_chr5_+_140777454_140777610	0.126911	SOX2.p2	NM_018927|PCDHGB7|56099|protocadherin gamma subfamily B, 7	NM_032101|PCDHGB7|56099|protocadherin gamma subfamily B, 7	AF152336|PCDHGB7|56099|protocadherin gamma subfamily B, 7	AF152523|PCDHGB7|56099|protocadherin gamma subfamily B, 7
hg18_v1_chr7_-_148212292_148212309	0.126835	SOX2.p2	BC010858|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	AB208895|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)
hg18_v1_chr4_+_41309690_41309848	0.126724	SOX2.p2	AK299835|LIMCH1|22998|LIM and calponin homology domains 1
hg18_v1_chr17_-_36294962_36295023	0.126515	SOX2.p2	DQ890783|KRT20|54474|keratin 20	DQ896754|KRT20|54474|keratin 20	BC031559|KRT20|54474|keratin 20	AK312744|KRT20|54474|keratin 20	NM_019010|KRT20|54474|keratin 20
hg18_v1_chr19_-_47261761_47261796	0.12636	SOX2.p2	S40369|GRIK5|2901|glutamate receptor, ionotropic, kainate 5	AJ249209|GRIK5|2901|glutamate receptor, ionotropic, kainate 5	BC131717|GRIK5|2901|glutamate receptor, ionotropic, kainate 5	NM_002088|GRIK5|2901|glutamate receptor, ionotropic, kainate 5
hg18_v1_chr10_-_64698831_64699011	0.126197	SOX2.p2	BC126403|JMJD1C|221037|jumonji domain containing 1C	BC143722|JMJD1C|221037|jumonji domain containing 1C	BX537954|JMJD1C|221037|jumonji domain containing 1C	NM_004241|JMJD1C|221037|jumonji domain containing 1C	BC108649|JMJD1C|221037|jumonji domain containing 1C
hg18_v1_chr4_-_83569572_83569642	0.126121	SOX2.p2	CR604391|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR611909|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	AK294683|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR600214|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR606578|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR614785|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR614067|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR593853|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR594812|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR615355|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR615922|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR616930|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR605042|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	D89092|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like
hg18_v1_chr1_+_219119623_219119822	0.126097	SOX2.p2	DQ893305|HLX|3142|H2.0-like homeobox	DQ896761|HLX|3142|H2.0-like homeobox
hg18_v1_chr9_+_95886625_95886645	0.126005	SOX2.p2	AK124912|PTPDC1|138639|protein tyrosine phosphatase domain containing 1
hg18_v1_chr5_-_134762791_134762810	0.125904	SOX2.p2	CR597742|H2AFY|9555|H2A histone family, member Y	CR618845|H2AFY|9555|H2A histone family, member Y	CR600032|H2AFY|9555|H2A histone family, member Y
hg18_v1_chr7_+_142670711_142670738	0.125822	SOX2.p2	BC063425|GSTK1|373156|glutathione S-transferase kappa 1	CR597274|GSTK1|373156|glutathione S-transferase kappa 1	AM393732|GSTK1|373156|glutathione S-transferase kappa 1	BC050715|GSTK1|373156|glutathione S-transferase kappa 1	CR613327|GSTK1|373156|glutathione S-transferase kappa 1	AK299968|GSTK1|373156|glutathione S-transferase kappa 1	CR533445|GSTK1|373156|glutathione S-transferase kappa 1	CR605600|GSTK1|373156|glutathione S-transferase kappa 1
hg18_v1_chr12_+_62523648_62524339	0.125789	SOX2.p2	
hg18_v1_chr1_+_144004589_144004727	0.125628	SOX2.p2	AY894562|NBPF8|728841|neuroblastoma breakpoint family, member 8	AY894565|NBPF10|100132406|neuroblastoma breakpoint family, member 10	AY894570|NBPF8|728841|neuroblastoma breakpoint family, member 8	NM_001039703|NBPF10|100132406|neuroblastoma breakpoint family, member 10
hg18_v1_chrX_+_11687655_11687681	0.125564	SOX2.p2	NM_006800|MSL3|10943|male-specific lethal 3 homolog (Drosophila)	AK025642|MSL3|10943|male-specific lethal 3 homolog (Drosophila)
hg18_v1_chr5_+_156628929_156628939	0.125284	SOX2.p2	BC011762|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	BC021008|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	NM_014376|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2
hg18_v1_chr1_+_36160375_36160517	0.125001	SOX2.p2	AK000326|EIF2C1|26523|eukaryotic translation initiation factor 2C, 1
hg18_v1_chr1_+_109450116_109450221	0.124812	SOX2.p2	
hg18_v1_chr6_-_29120930_29120995	0.12475	SOX2.p2	BC103870|OR2W1|26692|olfactory receptor, family 2, subfamily W, member 1	BC103871|OR2W1|26692|olfactory receptor, family 2, subfamily W, member 1	BC103872|OR2W1|26692|olfactory receptor, family 2, subfamily W, member 1	NM_030903|OR2W1|26692|olfactory receptor, family 2, subfamily W, member 1
hg18_v1_chr17_+_36642240_36642277	0.124631	SOX2.p2	AJ406947|KRTAP9-3|83900|keratin associated protein 9-3	NM_031962|KRTAP9-3|83900|keratin associated protein 9-3	BC074918|KRTAP9-3|83900|keratin associated protein 9-3	BC074919|KRTAP9-3|83900|keratin associated protein 9-3	AJ406951|KRTAP9-9|81870|keratin associated protein 9-9
hg18_v1_chr19_+_45564549_45564697	0.1241	SOX2.p2	BC000553|PLD3|23646|phospholipase D family, member 3
hg18_v1_chr5_-_156935283_156935306	0.124093	SOX2.p2	
hg18_v1_chr1_-_102234959_102235192	0.123398	SOX2.p2	EU176509|OLFM3|118427|olfactomedin 3	AF397394|OLFM3|118427|olfactomedin 3	AF397395|OLFM3|118427|olfactomedin 3	AF397396|OLFM3|118427|olfactomedin 3	AF397397|OLFM3|118427|olfactomedin 3	BC022531|OLFM3|118427|olfactomedin 3	AK095724|OLFM3|118427|olfactomedin 3
hg18_v1_chr9_+_90193807_90193830	0.123274	SOX2.p2	AK315854|SPIN1|10927|spindlin 1
hg18_v1_chr3_+_69895651_69895651	0.123218	SOX2.p2	AB006988|MITF|4286|microphthalmia-associated transcription factor	NM_006722|MITF|4286|microphthalmia-associated transcription factor
hg18_v1_chr3_+_156280129_156280157	0.123051	SOX2.p2	AK310664|MME|4311|membrane metallo-endopeptidase	NM_000902|MME|4311|membrane metallo-endopeptidase	BX647134|MME|4311|membrane metallo-endopeptidase
hg18_v1_chr1_+_100590595_100590615	0.123033	SOX2.p2	NM_003672|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)	NM_033312|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)	NM_033313|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)
hg18_v1_chr5_+_180399871_180399971	0.122983	SOX2.p2	AK298113|BTNL9|153579|butyrophilin-like 9	BC062459|BTNL9|153579|butyrophilin-like 9
hg18_v1_chr11_-_10630408_10630498	0.122963	SOX2.p2	AK300358|MRVI1|10335|murine retrovirus integration site 1 homolog	NM_001098579|MRVI1|10335|murine retrovirus integration site 1 homolog	AF081249|MRVI1|10335|murine retrovirus integration site 1 homolog
hg18_v1_chr9_-_14303899_14303907	0.122846	SOX2.p2	AK299605|NFIB|4781|nuclear factor I/B
hg18_v1_chr21_-_39642712_39642807	0.122811	SOX2.p2	BT007337|HMGN1|3150|high-mobility group nucleosome binding domain 1	DQ891741|HMGN1|3150|high-mobility group nucleosome binding domain 1	DQ894919|HMGN1|3150|high-mobility group nucleosome binding domain 1	CR620500|HMGN1|3150|high-mobility group nucleosome binding domain 1	CR601793|HMGN1|3150|high-mobility group nucleosome binding domain 1
hg18_v1_chr17_-_37590910_37590995	0.122727	SOX2.p2	AF041240|HCRT|3060|hypocretin (orexin) neuropeptide precursor	NM_001524|HCRT|3060|hypocretin (orexin) neuropeptide precursor
hg18_v1_chr7_+_116380590_116380653	0.122569	SOX2.p2	BC075855|ST7|7982|suppression of tumorigenicity 7	NM_018412|ST7|7982|suppression of tumorigenicity 7	NM_021908|ST7|7982|suppression of tumorigenicity 7	AF234882|ST7|7982|suppression of tumorigenicity 7	AF234883|ST7|7982|suppression of tumorigenicity 7
hg18_v1_chr12_-_119733062_119733071	0.122398	SOX2.p2	AK074916|SPPL3|121665|signal peptide peptidase 3
hg18_v1_chr17_-_39094427_39094456	0.122221	SOX2.p2	EU446636|MEOX1|4222|mesenchyme homeobox 1	BC069474|MEOX1|4222|mesenchyme homeobox 1	BC069506|MEOX1|4222|mesenchyme homeobox 1	NM_004527|MEOX1|4222|mesenchyme homeobox 1	NM_013999|MEOX1|4222|mesenchyme homeobox 1	U10492|MEOX1|4222|mesenchyme homeobox 1	U10493|MEOX1|4222|mesenchyme homeobox 1
hg18_v1_chrX_-_128805400_128805619	0.122103	SOX2.p2	AL161962|ZDHHC9|51114|zinc finger, DHHC-type containing 9	AK096967|ZDHHC9|51114|zinc finger, DHHC-type containing 9	AF151847|ZDHHC9|51114|zinc finger, DHHC-type containing 9	AY358558|ZDHHC9|51114|zinc finger, DHHC-type containing 9	BC006200|ZDHHC9|51114|zinc finger, DHHC-type containing 9	BC012826|ZDHHC9|51114|zinc finger, DHHC-type containing 9	BC003128|ZDHHC9|51114|zinc finger, DHHC-type containing 9	AK001112|ZDHHC9|51114|zinc finger, DHHC-type containing 9	AY952881|ZDHHC9|51114|zinc finger, DHHC-type containing 9	NM_016032|ZDHHC9|51114|zinc finger, DHHC-type containing 9
hg18_v1_chr17_-_45621312_45621316	0.122033	SOX2.p2	J00111|COL1A1|1277|collagen, type I, alpha 1
hg18_v1_chr5_-_111782637_111782908	0.121918	SOX2.p2	AB030240|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A	BC114942|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A	BC114632|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A	BC031042|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A	NM_022140|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A
hg18_v1_chr1_+_203503214_203503300	0.121862	SOX2.p2	AY358192|TMCC2|9911|transmembrane and coiled-coil domain family 2
hg18_v1_chr6_-_11490487_11490566	0.121816	SOX2.p2	BX648041|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9	AK292682|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9	NM_001142393|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9
hg18_v1_chr14_-_87529212_87529221	0.121808	SOX2.p2	DQ891232|GALC|2581|galactosylceramidase	DQ894416|GALC|2581|galactosylceramidase	BC036518|GALC|2581|galactosylceramidase
hg18_v1_chr5_+_65408500_65408622	0.121758	SOX2.p2	AK074288|ERBB2IP|55914|erbb2 interacting protein
hg18_v1_chr4_+_123380569_123380579	0.121623	SOX2.p2	CR936613|KIAA1109|84162|KIAA1109
hg18_v1_chr6_+_43846735_43846961	0.121427	SOX2.p2	M27281|VEGFA|7422|vascular endothelial growth factor A	M32977|VEGFA|7422|vascular endothelial growth factor A	AY047581|VEGFA|7422|vascular endothelial growth factor A	X62568|VEGFA|7422|vascular endothelial growth factor A	EU832814|VEGFA|7422|vascular endothelial growth factor A	GQ129408|VEGFA|7422|vascular endothelial growth factor A	AB021221|VEGFA|7422|vascular endothelial growth factor A	AB451322|VEGFA|7422|vascular endothelial growth factor A	AB451451|VEGFA|7422|vascular endothelial growth factor A	AF091352|VEGFA|7422|vascular endothelial growth factor A	AF214570|VEGFA|7422|vascular endothelial growth factor A	AF430806|VEGFA|7422|vascular endothelial growth factor A	AF486837|VEGFA|7422|vascular endothelial growth factor A	AJ010438|VEGFA|7422|vascular endothelial growth factor A	AY263145|VEGFA|7422|vascular endothelial growth factor A	AY500353|VEGFA|7422|vascular endothelial growth factor A	AY766116|VEGFA|7422|vascular endothelial growth factor A	DQ229900|VEGFA|7422|vascular endothelial growth factor A
hg18_v1_chr5_+_85949518_85949628	0.12136	SOX2.p2	BC001005|COX7C|1350|cytochrome c oxidase subunit VIIc	NM_001867|COX7C|1350|cytochrome c oxidase subunit VIIc	BC007498|COX7C|1350|cytochrome c oxidase subunit VIIc	X16560|COX7C|1350|cytochrome c oxidase subunit VIIc	BT007098|COX7C|1350|cytochrome c oxidase subunit VIIc	DQ891355|COX7C|1350|cytochrome c oxidase subunit VIIc	DQ894536|COX7C|1350|cytochrome c oxidase subunit VIIc
hg18_v1_chr11_+_6854431_6854454	0.12129	SOX2.p2	BC137024|OR10A4|283297|olfactory receptor, family 10, subfamily A, member 4	BC137027|OR10A4|283297|olfactory receptor, family 10, subfamily A, member 4	NM_207186|OR10A4|283297|olfactory receptor, family 10, subfamily A, member 4	AF209506|OR10A4|283297|olfactory receptor, family 10, subfamily A, member 4
hg18_v1_chrX_+_96025562_96025691	0.121269	SOX2.p2	NM_013347|RPA4|29935|replication protein A4, 30kDa	U24186|RPA4|29935|replication protein A4, 30kDa	BC069791|RPA4|29935|replication protein A4, 30kDa	BC069808|RPA4|29935|replication protein A4, 30kDa	BC069824|RPA4|29935|replication protein A4, 30kDa	BC104013|RPA4|29935|replication protein A4, 30kDa	BC104014|RPA4|29935|replication protein A4, 30kDa
hg18_v1_chr10_+_18988282_18988572	0.121057	SOX2.p2	NM_178815|ARL5B|221079|ADP-ribosylation factor-like 5B	BC024163|ARL5B|221079|ADP-ribosylation factor-like 5B	AK027275|ARL5B|221079|ADP-ribosylation factor-like 5B	AF494061|ARL5B|221079|ADP-ribosylation factor-like 5B	DQ893166|ARL5B|221079|ADP-ribosylation factor-like 5B	DQ896464|ARL5B|221079|ADP-ribosylation factor-like 5B
hg18_v1_chr1_-_156056456_156056563	0.120915	SOX2.p2	AF329488|FCRL1|115350|Fc receptor-like 1	BC021274|FCRL1|115350|Fc receptor-like 1	AK315748|FCRL1|115350|Fc receptor-like 1	AK096690|FCRL1|115350|Fc receptor-like 1	BC033690|FCRL1|115350|Fc receptor-like 1	AF459634|FCRL1|115350|Fc receptor-like 1	AY043464|FCRL1|115350|Fc receptor-like 1	NM_001159397|FCRL1|115350|Fc receptor-like 1	NM_001159398|FCRL1|115350|Fc receptor-like 1	NM_052938|FCRL1|115350|Fc receptor-like 1
hg18_v1_chr7_+_142885087_142885087	0.120828	SOX2.p2	BC101157|TAS2R41|259287|taste receptor, type 2, member 41	BC101158|TAS2R41|259287|taste receptor, type 2, member 41	NM_176883|TAS2R41|259287|taste receptor, type 2, member 41
hg18_v1_chr1_+_149299307_149299485	0.120825	SOX2.p2	U16954|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	BC021703|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	BC032996|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	CR599332|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11
hg18_v1_chr8_-_133140808_133140808	0.12058	SOX2.p2	AK297911|OC90|729330|otoconin 90	NM_001080399|OC90|729330|otoconin 90
hg18_v1_chr4_+_15292500_15292601	0.120262	SOX2.p2	BC035074|FAM200B|285550|family with sequence similarity 200, member B
hg18_v1_chr6_+_41622267_41622363	0.120218	SOX2.p2	BC052803|FOXP4|116113|forkhead box P4
hg18_v1_chr1_-_232810111_232810187	0.120198	SOX2.p2	BC020516|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2
hg18_v1_chr3_+_130014957_130015132	0.12018	SOX2.p2	CR619444|RAB7A|7879|RAB7A, member RAS oncogene family
hg18_v1_chr6_-_18095672_18095806	0.119977	SOX2.p2	AJ291578|KIF13A|63971|kinesin family member 13A	AJ291579|KIF13A|63971|kinesin family member 13A	BC127115|KIF13A|63971|kinesin family member 13A	BC127116|KIF13A|63971|kinesin family member 13A	AY014403|KIF13A|63971|kinesin family member 13A	AY014404|KIF13A|63971|kinesin family member 13A	NM_001105566|KIF13A|63971|kinesin family member 13A	NM_001105567|KIF13A|63971|kinesin family member 13A	NM_001105568|KIF13A|63971|kinesin family member 13A	NM_022113|KIF13A|63971|kinesin family member 13A
hg18_v1_chr12_-_106678910_106679029	0.119921	SOX2.p2	AK056378|PRDM4|11108|PR domain containing 4
hg18_v1_chr3_+_189425886_189425970	0.119663	SOX2.p2	NM_001167671|LPP|4026|LIM domain containing preferred translocation partner in lipoma	BC130584|LPP|4026|LIM domain containing preferred translocation partner in lipoma	BC144076|LPP|4026|LIM domain containing preferred translocation partner in lipoma
hg18_v1_chr6_+_135544214_135544344	0.119629	SOX2.p2	AJ616235|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	M15024|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ616791|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AF104863|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787443|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787444|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787445|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787446|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787447|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787448|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787449|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787450|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787451|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787452|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787453|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787454|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787455|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787456|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787457|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787458|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787459|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787460|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787461|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787462|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787463|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787464|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787465|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787466|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787467|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787468|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787469|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787470|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787471|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787472|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787473|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787474|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787475|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)
hg18_v1_chr3_+_128830656_128830788	0.119611	SOX2.p2	CR604786|PODXL2|50512|podocalyxin-like 2	BC019330|PODXL2|50512|podocalyxin-like 2	AY359096|PODXL2|50512|podocalyxin-like 2	NM_015720|PODXL2|50512|podocalyxin-like 2	BC052585|PODXL2|50512|podocalyxin-like 2	AF219137|PODXL2|50512|podocalyxin-like 2	CR596999|PODXL2|50512|podocalyxin-like 2
hg18_v1_chr7_+_28692122_28692294	0.119466	SOX2.p2	L05912|CREB5|9586|cAMP responsive element binding protein 5	AK300455|CREB5|9586|cAMP responsive element binding protein 5	BC059400|CREB5|9586|cAMP responsive element binding protein 5	NM_001011666|CREB5|9586|cAMP responsive element binding protein 5	AK316187|CREB5|9586|cAMP responsive element binding protein 5	AB209262|CREB5|9586|cAMP responsive element binding protein 5
hg18_v1_chr5_-_77880731_77880827	0.119294	SOX2.p2	CR936660|LHFPL2|10184|lipoma HMGIC fusion partner-like 2
hg18_v1_chr6_+_84626113_84626129	0.11894	SOX2.p2	AK313146|CYB5R4|51167|cytochrome b5 reductase 4	BC025380|CYB5R4|51167|cytochrome b5 reductase 4	AL832113|CYB5R4|51167|cytochrome b5 reductase 4
hg18_v1_chr4_-_185921384_185921392	0.118861	SOX2.p2	CR598751|ACSL1|2180|acyl-CoA synthetase long-chain family member 1
hg18_v1_chr17_-_10393664_10393741	0.118762	SOX2.p2	NM_001100112|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult	BC093082|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult	AK299440|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult	AK300702|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult	AK308102|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult	BX510904|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult	NM_017534|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult
hg18_v1_chr1_+_110683586_110683622	0.118712	SOX2.p2	AK022541|RBM15|64783|RNA binding motif protein 15	BC006397|RBM15|64783|RNA binding motif protein 15	BC062316|RBM15|64783|RNA binding motif protein 15
hg18_v1_chr14_-_87529600_87529659	0.118691	SOX2.p2	AK302956|GALC|2581|galactosylceramidase	NM_000153|GALC|2581|galactosylceramidase	NM_001037525|GALC|2581|galactosylceramidase
hg18_v1_chr12_+_102859354_102859421	0.118414	SOX2.p2	CR606918|HSP90B1|7184|heat shock protein 90kDa beta (Grp94), member 1
hg18_v1_chr1_+_89871212_89871230	0.118405	SOX2.p2	BC036122|LRRC8C|84230|leucine rich repeat containing 8 family, member C
hg18_v1_chr2_+_210152399_210152432	0.118383	SOX2.p2	BC110423|MAP2|4133|microtubule-associated protein 2
hg18_v1_chr6_-_112186977_112186977	0.118374	SOX2.p2	BC032496|FYN|2534|FYN oncogene related to SRC, FGR, YES	NM_153048|FYN|2534|FYN oncogene related to SRC, FGR, YES
hg18_v1_chr2_-_36929520_36929549	0.118354	SOX2.p2	BC015406|STRN|6801|striatin, calmodulin binding protein
hg18_v1_chr9_+_122890394_122890425	0.118343	SOX2.p2	NM_007018|CEP110|11064|centrosomal protein 110kDa	BC137284|CEP110|11064|centrosomal protein 110kDa	BC137286|CEP110|11064|centrosomal protein 110kDa	AF513978|CEP110|11064|centrosomal protein 110kDa
hg18_v1_chr17_+_63252704_63252719	0.11833	SOX2.p2	AY282495|BPTF|2186|bromodomain PHD finger transcription factor
hg18_v1_chr1_+_89871231_89871236	0.118301	SOX2.p2	NM_032270|LRRC8C|84230|leucine rich repeat containing 8 family, member C
hg18_v1_chr6_+_135544138_135544145	0.118043	SOX2.p2	AJ606317|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ606318|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ606319|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ606320|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ606321|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ606322|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ606323|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ606324|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_001130172|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_001130173|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_001161656|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_001161657|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_001161658|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_001161659|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_001161660|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_005375|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	X52125|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)
hg18_v1_chr8_-_93181091_93181091	0.117626	SOX2.p2	NM_001198628|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg18_v1_chr1_+_165075304_165075329	0.117577	SOX2.p2	AK293946|POGK|57645|pogo transposable element with KRAB domain	AK299537|POGK|57645|pogo transposable element with KRAB domain
hg18_v1_chrX_+_41077594_41077594	0.117343	SOX2.p2	AF000982|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AF000983|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	NM_001193416|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	NM_001193417|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	NM_001356|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked
hg18_v1_chr15_+_61583846_61584015	0.116984	SOX2.p2	AK301236|USP3|9960|ubiquitin specific peptidase 3	BC065300|USP3|9960|ubiquitin specific peptidase 3	NM_006537|USP3|9960|ubiquitin specific peptidase 3	AY461579|USP3|9960|ubiquitin specific peptidase 3	BC100029|USP3|9960|ubiquitin specific peptidase 3	AF073344|USP3|9960|ubiquitin specific peptidase 3	BC107137|USP3|9960|ubiquitin specific peptidase 3	BC107138|USP3|9960|ubiquitin specific peptidase 3	AK300948|USP3|9960|ubiquitin specific peptidase 3	AK301563|USP3|9960|ubiquitin specific peptidase 3	BC018113|USP3|9960|ubiquitin specific peptidase 3	BX647760|USP3|9960|ubiquitin specific peptidase 3	DQ891025|USP3|9960|ubiquitin specific peptidase 3	DQ894205|USP3|9960|ubiquitin specific peptidase 3	BT007269|USP3|9960|ubiquitin specific peptidase 3	AK307810|USP3|9960|ubiquitin specific peptidase 3
hg18_v1_chr4_-_111777651_111777678	0.116391	SOX2.p2	CR605855|PITX2|5308|paired-like homeodomain 2
hg18_v1_chr6_+_84626083_84626112	0.116351	SOX2.p2	NM_016230|CYB5R4|51167|cytochrome b5 reductase 4
hg18_v1_chr1_+_40631603_40631603	0.116265	SOX2.p2	AK308280|SMAP2|64744|small ArfGAP2	NM_001198979|SMAP2|64744|small ArfGAP2
hg18_v1_chr9_+_76302071_76302118	0.116176	SOX2.p2	NM_006914|RORB|6096|RAR-related orphan receptor B	BC051830|RORB|6096|RAR-related orphan receptor B	Y08639|RORB|6096|RAR-related orphan receptor B
hg18_v1_chr17_-_70039107_70039169	0.116129	SOX2.p2	AF427618|CD300LB|124599|CD300 molecule-like family member b	AY359025|CD300LB|124599|CD300 molecule-like family member b	AY646929|CD300LB|124599|CD300 molecule-like family member b
hg18_v1_chr1_+_210864411_210864438	0.116071	SOX2.p2	AK301981|FAM71A|149647|family with sequence similarity 71, member A	NM_153606|FAM71A|149647|family with sequence similarity 71, member A	BC035007|FAM71A|149647|family with sequence similarity 71, member A
hg18_v1_chr10_+_105717459_105717495	0.116003	SOX2.p2	AF273048|SLK|9748|STE20-like kinase	NM_014720|SLK|9748|STE20-like kinase	BC111565|SLK|9748|STE20-like kinase	BC008697|SLK|9748|STE20-like kinase
hg18_v1_chr3_+_9748494_9748603	0.115722	SOX2.p2	AL713696|BRPF1|7862|bromodomain and PHD finger containing, 1
hg18_v1_chr5_+_88221013_88221028	0.115578	SOX2.p2	AK093634|RPS6|6194|ribosomal protein S6
hg18_v1_chr14_-_54720101_54720218	0.115538	SOX2.p2	BT007344|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5
hg18_v1_chrX_-_110541029_110541029	0.115462	SOX2.p2	AJ003112|DCX|1641|doublecortin	NM_000555|DCX|1641|doublecortin
hg18_v1_chr3_-_69212192_69212234	0.115392	SOX2.p2	AM392893|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AM393088|UBA3|9039|ubiquitin-like modifier activating enzyme 3	CR533537|UBA3|9039|ubiquitin-like modifier activating enzyme 3	DQ893167|UBA3|9039|ubiquitin-like modifier activating enzyme 3	DQ896465|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK314751|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK289392|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK002159|UBA3|9039|ubiquitin-like modifier activating enzyme 3	CR598743|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AL117566|UBA3|9039|ubiquitin-like modifier activating enzyme 3	BC022853|UBA3|9039|ubiquitin-like modifier activating enzyme 3	NM_003968|UBA3|9039|ubiquitin-like modifier activating enzyme 3	NM_198195|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK298878|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK316540|UBA3|9039|ubiquitin-like modifier activating enzyme 3
hg18_v1_chr10_+_102749222_102749254	0.115293	SOX2.p2	AB058716|LZTS2|84445|leucine zipper, putative tumor suppressor 2
hg18_v1_chr11_+_6904167_6904269	0.114907	SOX2.p2	AF056618|ZNF215|7762|zinc finger protein 215	NM_013250|ZNF215|7762|zinc finger protein 215	AK298365|ZNF215|7762|zinc finger protein 215
hg18_v1_chr7_-_75794919_75795084	0.114763	SOX2.p2	CR598331|YWHAG|7532|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide
hg18_v1_chr5_+_155686333_155686344	0.114675	SOX2.p2	BX537948|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)	NM_000337|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)	NM_001128209|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)	NM_172244|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)
hg18_v1_chr16_-_4792857_4792951	0.114636	SOX2.p2	CR603174|ROGDI|79641|rogdi homolog (Drosophila)
hg18_v1_chr20_-_48980858_48981403	0.114386	SOX2.p2	AF250860|ADNP|23394|activity-dependent neuroprotector homeobox	NM_015339|ADNP|23394|activity-dependent neuroprotector homeobox	NM_181442|ADNP|23394|activity-dependent neuroprotector homeobox	BC075794|ADNP|23394|activity-dependent neuroprotector homeobox
hg18_v1_chr1_+_6607511_6607511	0.114355	SOX2.p2	BC092427|THAP3|90326|THAP domain containing, apoptosis associated protein 3	NM_001195753|THAP3|90326|THAP domain containing, apoptosis associated protein 3
hg18_v1_chrX_+_41468351_41468377	0.114345	SOX2.p2	BC070180|GPR82|27197|G protein-coupled receptor 82	NM_080817|GPR82|27197|G protein-coupled receptor 82	AK122626|GPR82|27197|G protein-coupled receptor 82	AK313702|GPR82|27197|G protein-coupled receptor 82	AL832460|GPR82|27197|G protein-coupled receptor 82
hg18_v1_chr1_+_165075345_165075394	0.114308	SOX2.p2	AB040946|POGK|57645|pogo transposable element with KRAB domain	NM_017542|POGK|57645|pogo transposable element with KRAB domain	AK056711|POGK|57645|pogo transposable element with KRAB domain	BC131624|POGK|57645|pogo transposable element with KRAB domain
hg18_v1_chr1_+_37795101_37795193	0.114305	SOX2.p2	BX647913|DNALI1|7802|dynein, axonemal, light intermediate chain 1	NM_003462|DNALI1|7802|dynein, axonemal, light intermediate chain 1	BC039074|DNALI1|7802|dynein, axonemal, light intermediate chain 1	AF006386|DNALI1|7802|dynein, axonemal, light intermediate chain 1	AK225935|DNALI1|7802|dynein, axonemal, light intermediate chain 1	AK299918|DNALI1|7802|dynein, axonemal, light intermediate chain 1	BC046117|DNALI1|7802|dynein, axonemal, light intermediate chain 1	AK290502|DNALI1|7802|dynein, axonemal, light intermediate chain 1	AK295199|DNALI1|7802|dynein, axonemal, light intermediate chain 1
hg18_v1_chr3_+_134601479_134601617	0.114124	SOX2.p2	NM_003571|BFSP2|8419|beaded filament structural protein 2, phakinin	BC113518|BFSP2|8419|beaded filament structural protein 2, phakinin	BC113520|BFSP2|8419|beaded filament structural protein 2, phakinin	U48224|BFSP2|8419|beaded filament structural protein 2, phakinin
hg18_v1_chr17_-_7238546_7238612	0.114113	SOX2.p2	CR604817|PLSCR3|57048|phospholipid scramblase 3	AK124006|PLSCR3|57048|phospholipid scramblase 3	AF289602|PLSCR3|57048|phospholipid scramblase 3	CR622721|PLSCR3|57048|phospholipid scramblase 3	BC028080|PLSCR3|57048|phospholipid scramblase 3	AK098229|PLSCR3|57048|phospholipid scramblase 3	AK075188|PLSCR3|57048|phospholipid scramblase 3	NM_020360|PLSCR3|57048|phospholipid scramblase 3	AK314643|PLSCR3|57048|phospholipid scramblase 3	CR600989|PLSCR3|57048|phospholipid scramblase 3	BC093026|PLSCR3|57048|phospholipid scramblase 3	CR621218|PLSCR3|57048|phospholipid scramblase 3	CR600673|PLSCR3|57048|phospholipid scramblase 3	AF159442|PLSCR3|57048|phospholipid scramblase 3
hg18_v1_chr16_-_15742883_15743013	0.113945	SOX2.p2	D10667|MYH11|4629|myosin, heavy chain 11, smooth muscle
hg18_v1_chr1_+_6607796_6607865	0.113511	SOX2.p2	NM_001195752|THAP3|90326|THAP domain containing, apoptosis associated protein 3	NM_138350|THAP3|90326|THAP domain containing, apoptosis associated protein 3	CR601567|THAP3|90326|THAP domain containing, apoptosis associated protein 3	AK096217|THAP3|90326|THAP domain containing, apoptosis associated protein 3	BC022081|THAP3|90326|THAP domain containing, apoptosis associated protein 3	CR609298|THAP3|90326|THAP domain containing, apoptosis associated protein 3	CR600833|THAP3|90326|THAP domain containing, apoptosis associated protein 3	CR620139|THAP3|90326|THAP domain containing, apoptosis associated protein 3	DQ891670|THAP3|90326|THAP domain containing, apoptosis associated protein 3	DQ894856|THAP3|90326|THAP domain containing, apoptosis associated protein 3
hg18_v1_chr2_-_121875610_121875641	0.113434	SOX2.p2	CR749627|CLASP1|23332|cytoplasmic linker associated protein 1
hg18_v1_chr3_-_102522093_102522131	0.113191	SOX2.p2	AF173155|IMPG2|50939|interphotoreceptor matrix proteoglycan 2	NM_016247|IMPG2|50939|interphotoreceptor matrix proteoglycan 2
hg18_v1_chr12_-_14858358_14858382	0.113121	SOX2.p2	BC132752|C12orf69|440087|chromosome 12 open reading frame 69	BC132754|C12orf69|440087|chromosome 12 open reading frame 69	AK092637|C12orf69|440087|chromosome 12 open reading frame 69	NM_001013698|C12orf69|440087|chromosome 12 open reading frame 69
hg18_v1_chr19_-_50963942_50963968	0.113031	SOX2.p2	
hg18_v1_chr11_+_4564596_4564596	0.11298	SOX2.p2	BC136921|OR52I2|143502|olfactory receptor, family 52, subfamily I, member 2	BC151144|OR52I2|143502|olfactory receptor, family 52, subfamily I, member 2	NM_001005170|OR52I2|143502|olfactory receptor, family 52, subfamily I, member 2
hg18_v1_chr1_-_180627023_180627300	0.112958	SOX2.p2	NM_001033056|GLUL|2752|glutamate-ammonia ligase
hg18_v1_chr10_+_18280773_18280897	0.112717	SOX2.p2	NM_001145195|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12	NM_152725|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12	AK055061|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12	BC035118|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12	BC047635|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12	AK295294|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12	BC094700|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12
hg18_v1_chr5_+_180399830_180399856	0.11267	SOX2.p2	NM_152547|BTNL9|153579|butyrophilin-like 9	AK057097|BTNL9|153579|butyrophilin-like 9	AY358358|BTNL9|153579|butyrophilin-like 9
hg18_v1_chr6_-_49820030_49820126	0.112502	SOX2.p2	AK223380|CRISP3|10321|cysteine-rich secretory protein 3	X94323|CRISP3|10321|cysteine-rich secretory protein 3	AK303966|CRISP3|10321|cysteine-rich secretory protein 3	AK313387|CRISP3|10321|cysteine-rich secretory protein 3	AK292786|CRISP3|10321|cysteine-rich secretory protein 3	NM_001190986|CRISP3|10321|cysteine-rich secretory protein 3	NM_006061|CRISP3|10321|cysteine-rich secretory protein 3
hg18_v1_chr12_+_123339662_123339662	0.112406	SOX2.p2	AK126577|FAM101A|144347|family with sequence similarity 101, member A	NM_181709|FAM101A|144347|family with sequence similarity 101, member A
hg18_v1_chr12_+_69046241_69046826	0.112358	SOX2.p2	CR613566|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	NM_014505|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	CR614941|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	AF160967|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	BC042446|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	BC050621|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	AF215891|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	AF207992|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4
hg18_v1_chr3_+_192529567_192530154	0.112276	SOX2.p2	AJ416916|CCDC50|152137|coiled-coil domain containing 50	AJ557013|CCDC50|152137|coiled-coil domain containing 50	NM_174908|CCDC50|152137|coiled-coil domain containing 50	NM_178335|CCDC50|152137|coiled-coil domain containing 50	CR610519|CCDC50|152137|coiled-coil domain containing 50	CR618316|CCDC50|152137|coiled-coil domain containing 50	CR614299|CCDC50|152137|coiled-coil domain containing 50	CR603155|CCDC50|152137|coiled-coil domain containing 50	CR592179|CCDC50|152137|coiled-coil domain containing 50	CR601015|CCDC50|152137|coiled-coil domain containing 50	CR618301|CCDC50|152137|coiled-coil domain containing 50	BC065004|CCDC50|152137|coiled-coil domain containing 50
hg18_v1_chr6_+_53043729_53043729	0.112166	SOX2.p2	AF176704|FBXO9|26268|F-box protein 9	NM_012347|FBXO9|26268|F-box protein 9
hg18_v1_chr1_+_238321794_238321807	0.11208	SOX2.p2	NM_020066|FMN2|56776|formin 2
hg18_v1_chr20_+_2892918_2892935	0.11204	SOX2.p2	DQ891155|PTPRA|5786|protein tyrosine phosphatase, receptor type, A	DQ894334|PTPRA|5786|protein tyrosine phosphatase, receptor type, A
hg18_v1_chr3_-_121065112_121065117	0.111856	SOX2.p2	
hg18_v1_chr7_-_104696678_104696761	0.111847	SOX2.p2	BC035214|SRPK2|6733|SRSF protein kinase 2	U88666|SRPK2|6733|SRSF protein kinase 2	NM_182691|SRPK2|6733|SRSF protein kinase 2
hg18_v1_chr12_+_12829807_12829881	0.111756	SOX2.p2	BC126433|APOLD1|81575|apolipoprotein L domain containing 1	BC126435|APOLD1|81575|apolipoprotein L domain containing 1	NM_030817|APOLD1|81575|apolipoprotein L domain containing 1	AK225176|APOLD1|81575|apolipoprotein L domain containing 1	AK314392|APOLD1|81575|apolipoprotein L domain containing 1	AL136783|APOLD1|81575|apolipoprotein L domain containing 1
hg18_v1_chr3_+_35696119_35696282	0.111524	SOX2.p2	AK055064|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	NM_001025068|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	NM_001025069|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	AK289868|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	AF112220|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	AK289649|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	AK294484|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa
hg18_v1_chr17_+_45703765_45703765	0.111272	SOX2.p2	AY358204|TMEM92|162461|transmembrane protein 92	NM_001168215|TMEM92|162461|transmembrane protein 92
hg18_v1_chr19_-_3930828_3931135	0.111251	SOX2.p2	M19997|EEF2|1938|eukaryotic translation elongation factor 2
hg18_v1_chr3_+_153469206_153469405	0.111057	SOX2.p2	CR603447|MBNL1|4154|muscleblind-like (Drosophila)
hg18_v1_chr21_-_39642808_39642873	0.111025	SOX2.p2	BC071643|HMGN1|3150|high-mobility group nucleosome binding domain 1	BC023984|HMGN1|3150|high-mobility group nucleosome binding domain 1	BC072672|HMGN1|3150|high-mobility group nucleosome binding domain 1	CR619497|HMGN1|3150|high-mobility group nucleosome binding domain 1	BC070154|HMGN1|3150|high-mobility group nucleosome binding domain 1	BC000075|HMGN1|3150|high-mobility group nucleosome binding domain 1	CR619783|HMGN1|3150|high-mobility group nucleosome binding domain 1	AB209245|HMGN1|3150|high-mobility group nucleosome binding domain 1	BC106080|HMGN1|3150|high-mobility group nucleosome binding domain 1	BC070153|HMGN1|3150|high-mobility group nucleosome binding domain 1	J02621|HMGN1|3150|high-mobility group nucleosome binding domain 1	AK315410|HMGN1|3150|high-mobility group nucleosome binding domain 1
hg18_v1_chr12_+_94135645_94136005	0.111012	SOX2.p2	NM_017599|VEZT|55591|vezatin, adherens junctions transmembrane protein	AK001338|VEZT|55591|vezatin, adherens junctions transmembrane protein	AK225303|VEZT|55591|vezatin, adherens junctions transmembrane protein	AK309943|VEZT|55591|vezatin, adherens junctions transmembrane protein	AK225356|VEZT|55591|vezatin, adherens junctions transmembrane protein	BC014443|VEZT|55591|vezatin, adherens junctions transmembrane protein	AK307864|VEZT|55591|vezatin, adherens junctions transmembrane protein	AL137497|VEZT|55591|vezatin, adherens junctions transmembrane protein	BC064939|VEZT|55591|vezatin, adherens junctions transmembrane protein	BC028597|VEZT|55591|vezatin, adherens junctions transmembrane protein
hg18_v1_chr11_+_8016755_8016755	0.110786	SOX2.p2	NM_003320|TUB|7275|tubby homolog (mouse)	U82467|TUB|7275|tubby homolog (mouse)
hg18_v1_chr5_+_94752803_94752819	0.110687	SOX2.p2	BC034772|FAM81B|153643|family with sequence similarity 81, member B	NM_152548|FAM81B|153643|family with sequence similarity 81, member B	AK058062|FAM81B|153643|family with sequence similarity 81, member B
hg18_v1_chr8_-_145809695_145809695	0.110635	SOX2.p2	AB051475|ARHGAP39|80728|Rho GTPase activating protein 39	NM_025251|ARHGAP39|80728|Rho GTPase activating protein 39
hg18_v1_chr1_-_31311349_31311391	0.110547	SOX2.p2	BX647437|PUM1|9698|pumilio homolog 1 (Drosophila)
hg18_v1_chr19_+_56420181_56420198	0.110412	SOX2.p2	BC028152|CD33|945|CD33 molecule	AK304810|CD33|945|CD33 molecule	DQ891726|CD33|945|CD33 molecule	DQ894903|CD33|945|CD33 molecule	CR592075|CD33|945|CD33 molecule
hg18_v1_chr15_+_54998144_54998177	0.110374	SOX2.p2	AL831981|TCF12|6938|transcription factor 12	AK294617|TCF12|6938|transcription factor 12	AK310708|TCF12|6938|transcription factor 12	AK312710|TCF12|6938|transcription factor 12
hg18_v1_chr3_-_58538110_58538189	0.11032	SOX2.p2	AB023811|FAM107A|11170|family with sequence similarity 107, member A	BC010561|FAM107A|11170|family with sequence similarity 107, member A	CR607139|FAM107A|11170|family with sequence similarity 107, member A	CR610702|FAM107A|11170|family with sequence similarity 107, member A	AL050264|FAM107A|11170|family with sequence similarity 107, member A	CR601858|FAM107A|11170|family with sequence similarity 107, member A	CR621351|FAM107A|11170|family with sequence similarity 107, member A	CR617615|FAM107A|11170|family with sequence similarity 107, member A	CR591615|FAM107A|11170|family with sequence similarity 107, member A	CR609117|FAM107A|11170|family with sequence similarity 107, member A	AK055443|FAM107A|11170|family with sequence similarity 107, member A	AK128791|FAM107A|11170|family with sequence similarity 107, member A	CR600423|FAM107A|11170|family with sequence similarity 107, member A	BC093012|FAM107A|11170|family with sequence similarity 107, member A
hg18_v1_chr2_-_234441739_234441761	0.110256	SOX2.p2	AK316372|MSL3L2|151507|male-specific lethal 3-like 2 (Drosophila)
hg18_v1_chr19_+_18357966_18357999	0.110225	SOX2.p2	AB000584|GDF15|9518|growth differentiation factor 15	AK225431|GDF15|9518|growth differentiation factor 15	AK291530|GDF15|9518|growth differentiation factor 15	NM_004864|GDF15|9518|growth differentiation factor 15	BC008962|GDF15|9518|growth differentiation factor 15	U88323|GDF15|9518|growth differentiation factor 15	BC000529|GDF15|9518|growth differentiation factor 15	AF019770|GDF15|9518|growth differentiation factor 15	U51731|GDF15|9518|growth differentiation factor 15	BT019465|GDF15|9518|growth differentiation factor 15
hg18_v1_chr5_+_57823017_57823086	0.110199	SOX2.p2	AK090960|GAPT|202309|GRB2-binding adaptor protein, transmembrane	NM_152687|GAPT|202309|GRB2-binding adaptor protein, transmembrane
hg18_v1_chr5_+_139008052_139008065	0.110153	SOX2.p2	AK024338|CXXC5|51523|CXXC finger protein 5
hg18_v1_chr5_-_134762814_134762826	0.110065	SOX2.p2	AK023409|H2AFY|9555|H2A histone family, member Y	AK296014|H2AFY|9555|H2A histone family, member Y	CR607903|H2AFY|9555|H2A histone family, member Y	CR622086|H2AFY|9555|H2A histone family, member Y	NM_001040158|H2AFY|9555|H2A histone family, member Y	NM_138609|H2AFY|9555|H2A histone family, member Y	NM_138610|H2AFY|9555|H2A histone family, member Y
hg18_v1_chr4_+_41309668_41309684	0.109953	SOX2.p2	AK298915|LIMCH1|22998|LIM and calponin homology domains 1	AK299297|LIMCH1|22998|LIM and calponin homology domains 1	BC068200|LIMCH1|22998|LIM and calponin homology domains 1	BX537916|LIMCH1|22998|LIM and calponin homology domains 1	CR749205|LIMCH1|22998|LIM and calponin homology domains 1	NM_001112719|LIMCH1|22998|LIM and calponin homology domains 1	NM_001112720|LIMCH1|22998|LIM and calponin homology domains 1
hg18_v1_chr16_+_28993770_28993843	0.10967	SOX2.p2	AK225670|RRN3P2|653390|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 2	AK298442|RRN3P2|653390|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 2	AK301253|RRN3P2|653390|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 2
hg18_v1_chr10_+_102096761_102096902	0.109112	SOX2.p2	NM_005063|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)	AB032261|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)	BC062303|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)
hg18_v1_chr17_-_16816113_16816145	0.109075	SOX2.p2	AY302137|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B	BC109392|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B	AF023614|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B	AK223453|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B	NM_012452|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B	AK313302|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B
hg18_v1_chr9_-_113561613_113561633	0.109017	SOX2.p2	BC041858|C9orf84|158401|chromosome 9 open reading frame 84	AK126055|C9orf84|158401|chromosome 9 open reading frame 84	NM_001080551|C9orf84|158401|chromosome 9 open reading frame 84
hg18_v1_chr12_-_3732614_3732672	0.108881	SOX2.p2	AK057608|EFCAB4B|84766|EF-hand calcium binding domain 4B	NM_001144958|EFCAB4B|84766|EF-hand calcium binding domain 4B	NM_001144959|EFCAB4B|84766|EF-hand calcium binding domain 4B	NM_032680|EFCAB4B|84766|EF-hand calcium binding domain 4B
hg18_v1_chr10_+_70609986_70610056	0.10885	SOX2.p2	BC036112|SUPV3L1|6832|suppressor of var1, 3-like 1 (S. cerevisiae)	NM_003171|SUPV3L1|6832|suppressor of var1, 3-like 1 (S. cerevisiae)	AK290416|SUPV3L1|6832|suppressor of var1, 3-like 1 (S. cerevisiae)	AK299670|SUPV3L1|6832|suppressor of var1, 3-like 1 (S. cerevisiae)	AF042169|SUPV3L1|6832|suppressor of var1, 3-like 1 (S. cerevisiae)	DQ891004|SUPV3L1|6832|suppressor of var1, 3-like 1 (S. cerevisiae)	DQ894183|SUPV3L1|6832|suppressor of var1, 3-like 1 (S. cerevisiae)
hg18_v1_chr5_-_134762785_134762790	0.108768	SOX2.p2	BC095406|H2AFY|9555|H2A histone family, member Y	CR624310|H2AFY|9555|H2A histone family, member Y
hg18_v1_chr19_+_19164732_19164772	0.108708	SOX2.p2	AF105427|RFXANK|8625|regulatory factor X-associated ankyrin-containing protein	CR617522|RFXANK|8625|regulatory factor X-associated ankyrin-containing protein	AF077196|RFXANK|8625|regulatory factor X-associated ankyrin-containing protein	AF105428|RFXANK|8625|regulatory factor X-associated ankyrin-containing protein
hg18_v1_chr21_-_39642935_39642949	0.108505	SOX2.p2	CR625629|HMGN1|3150|high-mobility group nucleosome binding domain 1
hg18_v1_chr1_+_89871281_89871424	0.1085	SOX2.p2	AK127881|LRRC8C|84230|leucine rich repeat containing 8 family, member C	AB081509|LRRC8C|84230|leucine rich repeat containing 8 family, member C	BC103929|LRRC8C|84230|leucine rich repeat containing 8 family, member C	BC113973|LRRC8C|84230|leucine rich repeat containing 8 family, member C
hg18_v1_chr1_-_159543847_159543879	0.108473	SOX2.p2	CR590470|MPZ|4359|myelin protein zero
hg18_v1_chr8_+_11697588_11697598	0.108421	SOX2.p2	NM_004462|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1
hg18_v1_chrX_-_76823813_76823857	0.108356	SOX2.p2	
hg18_v1_chr1_-_41398126_41398191	0.108259	SOX2.p2	AK301497|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)	AK299383|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)	NM_001172222|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)
hg18_v1_chr1_-_40140126_40140273	0.108253	SOX2.p2	CR614411|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)	AK296078|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)	BC030694|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)	BC011864|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)	NM_001033081|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)	NM_001033082|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)	NM_005376|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)
hg18_v1_chr11_+_61943082_61943143	0.108229	SOX2.p2	AK312165|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)	NM_003357|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)	BC004481|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)	U01101|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)	DQ893375|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)	DQ896769|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)	X13197|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)	CR541780|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)
hg18_v1_chrX_+_55263515_55263570	0.108062	SOX2.p2	BC009230|PAGE5|90737|P antigen family, member 5 (prostate associated)	NM_130467|PAGE5|90737|P antigen family, member 5 (prostate associated)	NM_001013435|PAGE5|90737|P antigen family, member 5 (prostate associated)	AJ344352|PAGE5|90737|P antigen family, member 5 (prostate associated)	BC110803|PAGE5|90737|P antigen family, member 5 (prostate associated)
hg18_v1_chr10_+_92970302_92970474	0.108019	SOX2.p2	NM_032373|PCGF5|84333|polycomb group ring finger 5
hg18_v1_chrX_-_24575146_24575346	0.107899	SOX2.p2	AF148464|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	AF052510|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	CR618952|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta
hg18_v1_chr16_-_69876262_69876360	0.107832	SOX2.p2	AK000289|FTSJD1|55783|FtsJ methyltransferase domain containing 1
hg18_v1_chr2_-_225519974_225520022	0.107823	SOX2.p2	EU236710|DOCK10|55619|dedicator of cytokinesis 10
hg18_v1_chr1_-_239865724_239865854	0.107757	SOX2.p2	BC117360|CHML|1122|choroideremia-like (Rab escort protein 2)	NM_001821|CHML|1122|choroideremia-like (Rab escort protein 2)	X64728|CHML|1122|choroideremia-like (Rab escort protein 2)
hg18_v1_chr15_-_91078307_91078479	0.107726	SOX2.p2	BC110328|FAM174B|400451|family with sequence similarity 174, member B
hg18_v1_chr3_-_152478843_152478919	0.107667	SOX2.p2	BC034989|P2RY14|9934|purinergic receptor P2Y, G-protein coupled, 14	D13626|P2RY14|9934|purinergic receptor P2Y, G-protein coupled, 14	NM_014879|P2RY14|9934|purinergic receptor P2Y, G-protein coupled, 14
hg18_v1_chr2_-_156894927_156894946	0.10761	SOX2.p2	EU832662|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	EU832740|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2
hg18_v1_chr8_+_70567581_70567605	0.107584	SOX2.p2	NM_001128205|SULF1|23213|sulfatase 1	NM_001128206|SULF1|23213|sulfatase 1
hg18_v1_chr7_+_56086871_56086929	0.10756	SOX2.p2	NM_001009186|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	NM_001762|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	AB063318|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)
hg18_v1_chr19_+_56420131_56420179	0.107553	SOX2.p2	AK293934|CD33|945|CD33 molecule	NM_001082618|CD33|945|CD33 molecule	NM_001177608|CD33|945|CD33 molecule	NM_001772|CD33|945|CD33 molecule	AK309558|CD33|945|CD33 molecule	M23197|CD33|945|CD33 molecule	AY162464|CD33|945|CD33 molecule
hg18_v1_chr1_-_203592538_203592788	0.107518	SOX2.p2	AK299227|KLHDC8A|55220|kelch domain containing 8A	AK001610|KLHDC8A|55220|kelch domain containing 8A	NM_018203|KLHDC8A|55220|kelch domain containing 8A	AK096590|KLHDC8A|55220|kelch domain containing 8A
hg18_v1_chr1_-_149955415_149955505	0.107293	SOX2.p2	AB209264|CELF3|11189|CUGBP, Elav-like family member 3	NM_001172648|CELF3|11189|CUGBP, Elav-like family member 3	NM_001172649|CELF3|11189|CUGBP, Elav-like family member 3
hg18_v1_chr17_+_16886491_16886887	0.107249	SOX2.p2	BC136479|MPRIP|23164|myosin phosphatase Rho interacting protein	AB098507|MPRIP|23164|myosin phosphatase Rho interacting protein	NM_015134|MPRIP|23164|myosin phosphatase Rho interacting protein	NM_201274|MPRIP|23164|myosin phosphatase Rho interacting protein	AB189741|MPRIP|23164|myosin phosphatase Rho interacting protein	AY296247|MPRIP|23164|myosin phosphatase Rho interacting protein
hg18_v1_chr5_+_139008209_139008493	0.10722	SOX2.p2	AB097005|CXXC5|51523|CXXC finger protein 5	AB097032|CXXC5|51523|CXXC finger protein 5	NM_016463|CXXC5|51523|CXXC finger protein 5
hg18_v1_chr4_+_15292363_15292486	0.10712	SOX2.p2	NM_001145191|FAM200B|285550|family with sequence similarity 200, member B	BC048993|FAM200B|285550|family with sequence similarity 200, member B
hg18_v1_chr1_-_154988647_154988863	0.107075	SOX2.p2	NM_001126051|HDGF|3068|hepatoma-derived growth factor	AK096411|HDGF|3068|hepatoma-derived growth factor	AK304468|HDGF|3068|hepatoma-derived growth factor	NM_001126050|HDGF|3068|hepatoma-derived growth factor
hg18_v1_chr16_-_70763849_70763849	0.106715	SOX2.p2	AK122925|PMFBP1|83449|polyamine modulated factor 1 binding protein 1	NM_001160213|PMFBP1|83449|polyamine modulated factor 1 binding protein 1
hg18_v1_chr12_+_68265714_68265919	0.10665	SOX2.p2	AK294307|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	AK316408|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	NM_001198842|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	AK316397|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	AK302157|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)
hg18_v1_chr1_-_27871306_27871346	0.106378	SOX2.p2	NM_002038|IFI6|2537|interferon, alpha-inducible protein 6	NM_022872|IFI6|2537|interferon, alpha-inducible protein 6	NM_022873|IFI6|2537|interferon, alpha-inducible protein 6
hg18_v1_chr11_-_123030091_123030351	0.106229	SOX2.p2	AJ243396|SCN3B|55800|sodium channel, voltage-gated, type III, beta	AB032984|SCN3B|55800|sodium channel, voltage-gated, type III, beta	CR609664|SCN3B|55800|sodium channel, voltage-gated, type III, beta
hg18_v1_chr12_-_38300109_38300109	0.10618	SOX2.p2	AK314254|ABCD2|225|ATP-binding cassette, sub-family D (ALD), member 2	NM_005164|ABCD2|225|ATP-binding cassette, sub-family D (ALD), member 2
hg18_v1_chr1_+_32251988_32252183	0.106135	SOX2.p2	AK293369|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	AK091346|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	AK312916|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	AK303218|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	CR606103|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	CR625346|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	BC000717|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	BC019109|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	M88108|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	NM_006559|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	BC010132|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	CR616264|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	DQ895323|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	U78971|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1
hg18_v1_chr4_+_25931725_25931744	0.105968	SOX2.p2	AK302230|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region	CR624016|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region
hg18_v1_chr9_+_112470871_112471004	0.105952	SOX2.p2	NM_001166280|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	NM_001166281|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	NM_005592|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	AF006464|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	BC109098|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	BC109099|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	EU832778|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	EU832779|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	GQ129313|MUSK|4593|muscle, skeletal, receptor tyrosine kinase
hg18_v1_chrX_+_135057202_135057397	0.105932	SOX2.p2	NM_001159702|FHL1|2273|four and a half LIM domains 1	NM_001159703|FHL1|2273|four and a half LIM domains 1	NM_001449|FHL1|2273|four and a half LIM domains 1	BC010998|FHL1|2273|four and a half LIM domains 1	AK297124|FHL1|2273|four and a half LIM domains 1	AK091702|FHL1|2273|four and a half LIM domains 1	AK300966|FHL1|2273|four and a half LIM domains 1	AK094024|FHL1|2273|four and a half LIM domains 1
hg18_v1_chr10_-_99084417_99084469	0.105793	SOX2.p2	BC020165|FRAT2|23401|frequently rearranged in advanced T-cell lymphomas 2	AB045118|FRAT2|23401|frequently rearranged in advanced T-cell lymphomas 2	NM_012083|FRAT2|23401|frequently rearranged in advanced T-cell lymphomas 2
hg18_v1_chr5_-_140680470_140680517	0.105685	SOX2.p2	U18062|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa	BC032737|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa	X97999|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa	BC022798|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa	BC013397|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa	AK314837|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa
hg18_v1_chr15_-_43267139_43267327	0.105449	SOX2.p2	CR607464|SHF|90525|Src homology 2 domain containing F	CR626127|SHF|90525|Src homology 2 domain containing F	CR610652|SHF|90525|Src homology 2 domain containing F
hg18_v1_chr10_+_97793054_97793689	0.105442	SOX2.p2	BC043175|CCNJ|54619|cyclin J	NM_001134375|CCNJ|54619|cyclin J	NM_001134376|CCNJ|54619|cyclin J	NM_019084|CCNJ|54619|cyclin J	AK092360|CCNJ|54619|cyclin J	AK297264|CCNJ|54619|cyclin J
hg18_v1_chr11_+_62189354_62189388	0.105305	SOX2.p2	NM_001043229|METTL12|751071|methyltransferase like 12	AK297138|METTL12|751071|methyltransferase like 12	BC041359|METTL12|751071|methyltransferase like 12
hg18_v1_chr9_+_95886558_95886614	0.105288	SOX2.p2	BC031279|PTPDC1|138639|protein tyrosine phosphatase domain containing 1	NM_152422|PTPDC1|138639|protein tyrosine phosphatase domain containing 1	AK310403|PTPDC1|138639|protein tyrosine phosphatase domain containing 1	AK289692|PTPDC1|138639|protein tyrosine phosphatase domain containing 1
hg18_v1_chr11_-_123130435_123130462	0.105114	SOX2.p2	NM_001005188|OR6X1|390260|olfactory receptor, family 6, subfamily X, member 1	BC136855|OR6X1|390260|olfactory receptor, family 6, subfamily X, member 1	BC136856|OR6X1|390260|olfactory receptor, family 6, subfamily X, member 1
hg18_v1_chr15_-_57013058_57013090	0.105054	SOX2.p2	AK000867|SLTM|79811|SAFB-like, transcription modulator	AK055195|SLTM|79811|SAFB-like, transcription modulator	BC108656|SLTM|79811|SAFB-like, transcription modulator	AK291423|SLTM|79811|SAFB-like, transcription modulator	AK131242|SLTM|79811|SAFB-like, transcription modulator
hg18_v1_chr10_+_92970487_92970541	0.104995	SOX2.p2	AL832496|PCGF5|84333|polycomb group ring finger 5
hg18_v1_chr6_-_88911708_88911802	0.104677	SOX2.p2	BC095513|CNR1|1268|cannabinoid receptor 1 (brain)	AY766182|CNR1|1268|cannabinoid receptor 1 (brain)	AY995204|CNR1|1268|cannabinoid receptor 1 (brain)	BC100968|CNR1|1268|cannabinoid receptor 1 (brain)	BC100969|CNR1|1268|cannabinoid receptor 1 (brain)	BC100970|CNR1|1268|cannabinoid receptor 1 (brain)	BC100971|CNR1|1268|cannabinoid receptor 1 (brain)	DQ067455|CNR1|1268|cannabinoid receptor 1 (brain)	X81121|CNR1|1268|cannabinoid receptor 1 (brain)	AF107262|CNR1|1268|cannabinoid receptor 1 (brain)	BC074811|CNR1|1268|cannabinoid receptor 1 (brain)	BC074812|CNR1|1268|cannabinoid receptor 1 (brain)	NM_033181|CNR1|1268|cannabinoid receptor 1 (brain)	X81120|CNR1|1268|cannabinoid receptor 1 (brain)
hg18_v1_chr12_-_106679038_106679043	0.104672	SOX2.p2	NM_012406|PRDM4|11108|PR domain containing 4
hg18_v1_chr10_+_63331018_63331018	0.104153	SOX2.p2	NM_032199|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)
hg18_v1_chr13_+_96592051_96592116	0.104139	SOX2.p2	CR749802|MBNL2|10150|muscleblind-like 2 (Drosophila)
hg18_v1_chrX_-_100801472_100801518	0.10402	SOX2.p2	BC052628|ARMCX2|9823|armadillo repeat containing, X-linked 2	AB011084|ARMCX2|9823|armadillo repeat containing, X-linked 2	BC012541|ARMCX2|9823|armadillo repeat containing, X-linked 2	BX648494|ARMCX2|9823|armadillo repeat containing, X-linked 2	AK291342|ARMCX2|9823|armadillo repeat containing, X-linked 2	NM_014782|ARMCX2|9823|armadillo repeat containing, X-linked 2	NM_177949|ARMCX2|9823|armadillo repeat containing, X-linked 2
hg18_v1_chr9_+_18464090_18464103	0.103993	SOX2.p2	AK290667|ADAMTSL1|92949|ADAMTS-like 1	AY358327|ADAMTSL1|92949|ADAMTS-like 1	NM_001040272|ADAMTSL1|92949|ADAMTS-like 1	NM_052866|ADAMTSL1|92949|ADAMTS-like 1
hg18_v1_chrX_-_24575375_24575386	0.103941	SOX2.p2	AK315323|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	NM_001163265|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	NM_004845|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta
hg18_v1_chr5_-_134762764_134762783	0.103882	SOX2.p2	CR624606|H2AFY|9555|H2A histone family, member Y	CR607311|H2AFY|9555|H2A histone family, member Y
hg18_v1_chr15_-_43458247_43458271	0.103857	SOX2.p2	NM_001482|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)
hg18_v1_chr6_-_87861492_87861568	0.103853	SOX2.p2	V00518|CGA|1081|glycoprotein hormones, alpha polypeptide	CR615870|CGA|1081|glycoprotein hormones, alpha polypeptide	CR591147|CGA|1081|glycoprotein hormones, alpha polypeptide	CR611908|CGA|1081|glycoprotein hormones, alpha polypeptide	CR591068|CGA|1081|glycoprotein hormones, alpha polypeptide	CR596397|CGA|1081|glycoprotein hormones, alpha polypeptide	CR598298|CGA|1081|glycoprotein hormones, alpha polypeptide	CR616045|CGA|1081|glycoprotein hormones, alpha polypeptide	CR626155|CGA|1081|glycoprotein hormones, alpha polypeptide	CR607107|CGA|1081|glycoprotein hormones, alpha polypeptide	CR595519|CGA|1081|glycoprotein hormones, alpha polypeptide	CR599056|CGA|1081|glycoprotein hormones, alpha polypeptide	CR611195|CGA|1081|glycoprotein hormones, alpha polypeptide	CR602651|CGA|1081|glycoprotein hormones, alpha polypeptide	AK311972|CGA|1081|glycoprotein hormones, alpha polypeptide	BC055080|CGA|1081|glycoprotein hormones, alpha polypeptide	BC010957|CGA|1081|glycoprotein hormones, alpha polypeptide	BC020782|CGA|1081|glycoprotein hormones, alpha polypeptide	NM_000735|CGA|1081|glycoprotein hormones, alpha polypeptide	CR610488|CGA|1081|glycoprotein hormones, alpha polypeptide	CR622170|CGA|1081|glycoprotein hormones, alpha polypeptide
hg18_v1_chr3_-_161765860_161765913	0.103522	SOX2.p2	CR597383|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)	U93240|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)
hg18_v1_chr15_-_57013092_57013155	0.103466	SOX2.p2	BC140851|SLTM|79811|SAFB-like, transcription modulator	NM_001013843|SLTM|79811|SAFB-like, transcription modulator	NM_024755|SLTM|79811|SAFB-like, transcription modulator
hg18_v1_chr12_-_11399776_11399791	0.103453	SOX2.p2	BC044827|PRB1|5542|proline-rich protein BstNI subfamily 1	K03205|PRB1|5542|proline-rich protein BstNI subfamily 1	K03206|PRB1|5542|proline-rich protein BstNI subfamily 1	BC141917|PRB1|5542|proline-rich protein BstNI subfamily 1	K03204|PRB1|5542|proline-rich protein BstNI subfamily 1	NM_005039|PRB1|5542|proline-rich protein BstNI subfamily 1	NM_199353|PRB1|5542|proline-rich protein BstNI subfamily 1	NM_199354|PRB1|5542|proline-rich protein BstNI subfamily 1
hg18_v1_chr3_-_15348811_15349080	0.103365	SOX2.p2	BC023195|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)	DQ892875|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)	EU176725|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)	AB005047|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)	CR601004|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)	CR592833|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)	BC010123|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)
hg18_v1_chr1_-_174442906_174442977	0.103343	SOX2.p2	BC020845|RFWD2|64326|ring finger and WD repeat domain 2	AK314750|RFWD2|64326|ring finger and WD repeat domain 2
hg18_v1_chr15_+_20444164_20444192	0.103241	SOX2.p2	D38549|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1	BC005097|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1
hg18_v1_chr7_-_26202626_26202771	0.103097	SOX2.p2	CR613897|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1
hg18_v1_chr7_-_21951946_21952068	0.103064	SOX2.p2	AY161168|CDCA7L|55536|cell division cycle associated 7-like	AY161169|CDCA7L|55536|cell division cycle associated 7-like	BC009352|CDCA7L|55536|cell division cycle associated 7-like	AK095965|CDCA7L|55536|cell division cycle associated 7-like	BC025242|CDCA7L|55536|cell division cycle associated 7-like	BC032576|CDCA7L|55536|cell division cycle associated 7-like	AK300781|CDCA7L|55536|cell division cycle associated 7-like	BC039823|CDCA7L|55536|cell division cycle associated 7-like	AK022955|CDCA7L|55536|cell division cycle associated 7-like	AK292490|CDCA7L|55536|cell division cycle associated 7-like	NM_001127370|CDCA7L|55536|cell division cycle associated 7-like	NM_001127371|CDCA7L|55536|cell division cycle associated 7-like	NM_018719|CDCA7L|55536|cell division cycle associated 7-like
hg18_v1_chr2_-_2313894_2314051	0.102909	SOX2.p2	BC137272|MYT1L|23040|myelin transcription factor 1-like	BC137273|MYT1L|23040|myelin transcription factor 1-like	AF036943|MYT1L|23040|myelin transcription factor 1-like	AB029029|MYT1L|23040|myelin transcription factor 1-like	BC150281|MYT1L|23040|myelin transcription factor 1-like	NM_015025|MYT1L|23040|myelin transcription factor 1-like
hg18_v1_chr11_-_123261549_123261549	0.102849	SOX2.p2	AY634366|TMEM225|338661|transmembrane protein 225	NM_001013743|TMEM225|338661|transmembrane protein 225
hg18_v1_chr1_-_117011824_117011989	0.102737	SOX2.p2	NM_001007237|IGSF3|3321|immunoglobulin superfamily, member 3	NM_001542|IGSF3|3321|immunoglobulin superfamily, member 3	BC110651|IGSF3|3321|immunoglobulin superfamily, member 3
hg18_v1_chr21_-_42172476_42172659	0.102585	SOX2.p2	AB051812|PRDM15|63977|PR domain containing 15	AB051813|PRDM15|63977|PR domain containing 15	AB051814|PRDM15|63977|PR domain containing 15	AB051815|PRDM15|63977|PR domain containing 15	NM_001040424|PRDM15|63977|PR domain containing 15	AF276513|PRDM15|63977|PR domain containing 15	AY078498|PRDM15|63977|PR domain containing 15	NM_022115|PRDM15|63977|PR domain containing 15
hg18_v1_chr21_+_43903803_43903969	0.10254	SOX2.p2	BC028386|RRP1B|23076|ribosomal RNA processing 1 homolog B (S. cerevisiae)	NM_015056|RRP1B|23076|ribosomal RNA processing 1 homolog B (S. cerevisiae)	BC014005|RRP1B|23076|ribosomal RNA processing 1 homolog B (S. cerevisiae)	AK056263|RRP1B|23076|ribosomal RNA processing 1 homolog B (S. cerevisiae)	D80001|RRP1B|23076|ribosomal RNA processing 1 homolog B (S. cerevisiae)
hg18_v1_chr1_+_243065630_243065647	0.102314	SOX2.p2	
hg18_v1_chr7_+_143437539_143437608	0.102306	SOX2.p2	BC136742|OR2A2|442361|olfactory receptor, family 2, subfamily A, member 2	NM_001005480|OR2A2|442361|olfactory receptor, family 2, subfamily A, member 2
hg18_v1_chr1_+_50344550_50344550	0.102	SOX2.p2	AY033996|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	NM_001144775|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
hg18_v1_chr15_-_50316996_50317000	0.101938	SOX2.p2	AF161352|MYO5C|55930|myosin VC
hg18_v1_chr3_+_197951121_197951124	0.101937	SOX2.p2	NM_002577|PAK2|5062|p21 protein (Cdc42/Rac)-activated kinase 2
hg18_v1_chr2_-_100088224_100088476	0.101789	SOX2.p2	NM_001025108|AFF3|3899|AF4/FMR2 family, member 3
hg18_v1_chrX_-_128804972_128805241	0.101733	SOX2.p2	AK001524|ZDHHC9|51114|zinc finger, DHHC-type containing 9	BC000035|ZDHHC9|51114|zinc finger, DHHC-type containing 9	AB209807|ZDHHC9|51114|zinc finger, DHHC-type containing 9	NM_001008222|ZDHHC9|51114|zinc finger, DHHC-type containing 9
hg18_v1_chr1_-_52293634_52293634	0.101459	SOX2.p2	AF543416|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	NM_015913|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)
hg18_v1_chr7_+_80105718_80105767	0.101439	SOX2.p2	NM_000072|CD36|948|CD36 molecule (thrombospondin receptor)	NM_001001548|CD36|948|CD36 molecule (thrombospondin receptor)
hg18_v1_chr12_-_8656705_8656722	0.101359	SOX2.p2	AB040431|AICDA|57379|activation-induced cytidine deaminase	BC006296|AICDA|57379|activation-induced cytidine deaminase	NM_020661|AICDA|57379|activation-induced cytidine deaminase	CR615215|AICDA|57379|activation-induced cytidine deaminase
hg18_v1_chr10_+_101282679_101282727	0.10129	SOX2.p2	NM_145285|NKX2-3|159296|NK2 transcription factor related, locus 3 (Drosophila)	BC025788|NKX2-3|159296|NK2 transcription factor related, locus 3 (Drosophila)	AK313485|NKX2-3|159296|NK2 transcription factor related, locus 3 (Drosophila)	AK300856|NKX2-3|159296|NK2 transcription factor related, locus 3 (Drosophila)
hg18_v1_chr1_+_165225121_165225212	0.10129	SOX2.p2	CR597287|MAEL|84944|maelstrom homolog (Drosophila)	AK302253|MAEL|84944|maelstrom homolog (Drosophila)	AK131066|MAEL|84944|maelstrom homolog (Drosophila)	DQ076156|MAEL|84944|maelstrom homolog (Drosophila)	AK027810|MAEL|84944|maelstrom homolog (Drosophila)	NM_032858|MAEL|84944|maelstrom homolog (Drosophila)	CR614428|MAEL|84944|maelstrom homolog (Drosophila)	CR624981|MAEL|84944|maelstrom homolog (Drosophila)	BC028595|MAEL|84944|maelstrom homolog (Drosophila)
hg18_v1_chr3_-_161766005_161766023	0.101074	SOX2.p2	BC028691|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)	AK291041|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)
hg18_v1_chr4_+_154345039_154345071	0.10095	SOX2.p2	AK308731|TRIM2|23321|tripartite motif containing 2	NM_015271|TRIM2|23321|tripartite motif containing 2	AB011089|TRIM2|23321|tripartite motif containing 2	AF220018|TRIM2|23321|tripartite motif containing 2
hg18_v1_chr4_-_176971175_176971175	0.100949	SOX2.p2	BC032904|GPM6A|2823|glycoprotein M6A	NM_201591|GPM6A|2823|glycoprotein M6A
hg18_v1_chr15_+_20444155_20444160	0.100892	SOX2.p2	AY763578|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1
hg18_v1_chr12_-_94469357_94469393	0.100852	SOX2.p2	AL136825|USP44|84101|ubiquitin specific peptidase 44	NM_032147|USP44|84101|ubiquitin specific peptidase 44
hg18_v1_chr2_+_214984705_214984705	0.100705	SOX2.p2	BC146903|VWC2L|402117|von Willebrand factor C domain containing protein 2-like	BC146911|VWC2L|402117|von Willebrand factor C domain containing protein 2-like	BC146931|VWC2L|402117|von Willebrand factor C domain containing protein 2-like	BC146935|VWC2L|402117|von Willebrand factor C domain containing protein 2-like	BC171841|VWC2L|402117|von Willebrand factor C domain containing protein 2-like	NM_001080500|VWC2L|402117|von Willebrand factor C domain containing protein 2-like
hg18_v1_chr11_+_100367929_100368020	0.100661	SOX2.p2	AK314174|TMEM133|83935|transmembrane protein 133	AF247167|TMEM133|83935|transmembrane protein 133	NM_032021|TMEM133|83935|transmembrane protein 133
hg18_v1_chr8_+_7731402_7731402	0.100641	SOX2.p2	AJ314834|DEFB104A|140596|defensin, beta 104A	BC100848|DEFB104A|140596|defensin, beta 104A	BC100849|DEFB104A|140596|defensin, beta 104A	BC100850|DEFB104A|140596|defensin, beta 104A	BC100851|DEFB104A|140596|defensin, beta 104A	NM_001040702|DEFB104B|503618|defensin, beta 104B	NM_080389|DEFB104A|140596|defensin, beta 104A
hg18_v1_chr19_-_54093749_54093807	0.100451	SOX2.p2	U82469|TULP2|7288|tubby like protein 2	BC026070|TULP2|7288|tubby like protein 2	NM_003323|TULP2|7288|tubby like protein 2
hg18_v1_chr9_-_124329392_124329392	0.10042	SOX2.p2	NM_012363|OR1N1|138883|olfactory receptor, family 1, subfamily N, member 1
hg18_v1_chr13_-_74953873_74954806	0.100412	SOX2.p2	AB449885|TBC1D4|9882|TBC1 domain family, member 4	FM207106|TBC1D4|9882|TBC1 domain family, member 4	FM207107|TBC1D4|9882|TBC1 domain family, member 4	BC151239|TBC1D4|9882|TBC1 domain family, member 4	AB011175|TBC1D4|9882|TBC1 domain family, member 4	NM_014832|TBC1D4|9882|TBC1 domain family, member 4	AK307493|TBC1D4|9882|TBC1 domain family, member 4
hg18_v1_chrX_+_21868635_21868859	0.100104	SOX2.p2	CR591649|SMS|6611|spermine synthase	NM_004595|SMS|6611|spermine synthase	CR591187|SMS|6611|spermine synthase	CR617235|SMS|6611|spermine synthase	CR617125|SMS|6611|spermine synthase	CR619263|SMS|6611|spermine synthase	CR624838|SMS|6611|spermine synthase	CR608120|SMS|6611|spermine synthase	AD001528|SMS|6611|spermine synthase	AK293455|SMS|6611|spermine synthase	AK313834|SMS|6611|spermine synthase	CR594549|SMS|6611|spermine synthase	BC009898|SMS|6611|spermine synthase	CR598032|SMS|6611|spermine synthase	CR620002|SMS|6611|spermine synthase	CR607592|SMS|6611|spermine synthase	BC085621|SMS|6611|spermine synthase	CR591729|SMS|6611|spermine synthase	EU176347|SMS|6611|spermine synthase
hg18_v1_chr15_-_48198697_48198819	0.1001	SOX2.p2	BC144298|ATP8B4|79895|ATPase, class I, type 8B, member 4	BC144297|ATP8B4|79895|ATPase, class I, type 8B, member 4	NM_024837|ATP8B4|79895|ATPase, class I, type 8B, member 4
hg18_v1_chrX_-_106336199_106336325	0.099632	SOX2.p2	AK000137|NUP62CL|54830|nucleoporin 62kDa C-terminal like	CR605049|NUP62CL|54830|nucleoporin 62kDa C-terminal like	BC016327|NUP62CL|54830|nucleoporin 62kDa C-terminal like	BC017799|NUP62CL|54830|nucleoporin 62kDa C-terminal like	NM_017681|NUP62CL|54830|nucleoporin 62kDa C-terminal like
hg18_v1_chr3_+_38470782_38470813	0.0995651	SOX2.p2	NM_001106|ACVR2B|93|activin A receptor, type IIB	BC096243|ACVR2B|93|activin A receptor, type IIB	BC096244|ACVR2B|93|activin A receptor, type IIB	BC096245|ACVR2B|93|activin A receptor, type IIB	BC099642|ACVR2B|93|activin A receptor, type IIB	X77533|ACVR2B|93|activin A receptor, type IIB
hg18_v1_chr12_-_88573949_88574015	0.09955	SOX2.p2	J04027|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1	M95541|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1	NM_001001323|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1	NM_001682|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1	BC015346|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1
hg18_v1_chr7_+_120415958_120416044	0.0994949	SOX2.p2	NM_024913|C7orf58|79974|chromosome 7 open reading frame 58	AK289978|C7orf58|79974|chromosome 7 open reading frame 58	AL832619|C7orf58|79974|chromosome 7 open reading frame 58
hg18_v1_chr6_-_76022565_76022647	0.0994815	SOX2.p2	AJ420517|TMEM30A|55754|transmembrane protein 30A
hg18_v1_chr15_+_20444140_20444149	0.0992188	SOX2.p2	AK291604|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1
hg18_v1_chr3_+_25444837_25444905	0.0991668	SOX2.p2	BC030234|RARB|5915|retinoic acid receptor, beta	NM_000965|RARB|5915|retinoic acid receptor, beta	X07282|RARB|5915|retinoic acid receptor, beta	Y00291|RARB|5915|retinoic acid receptor, beta
hg18_v1_chrX_+_119379967_119380024	0.0991501	SOX2.p2	AK309999|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide	NM_001142447|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide	NM_012069|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide	AF158383|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide	AF158384|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide	BC117227|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide	BC143404|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide	BC143406|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide	BC143407|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide
hg18_v1_chr6_-_32268615_32268693	0.0991384	SOX2.p2	CR623296|GPSM3|63940|G-protein signaling modulator 3	CR604341|GPSM3|63940|G-protein signaling modulator 3	AJ243938|GPSM3|63940|G-protein signaling modulator 3	AK313922|GPSM3|63940|G-protein signaling modulator 3
hg18_v1_chr7_+_77005287_77005321	0.0990511	SOX2.p2	AK303602|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12	NM_001131008|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12	NM_001131009|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12	AK296764|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12
hg18_v1_chr1_-_154987904_154988027	0.0990247	SOX2.p2	AK298342|HDGF|3068|hepatoma-derived growth factor	AK315514|HDGF|3068|hepatoma-derived growth factor	BC018991|HDGF|3068|hepatoma-derived growth factor
hg18_v1_chr5_-_32424444_32424519	0.098931	SOX2.p2	AK025481|ZFR|51663|zinc finger RNA binding protein
hg18_v1_chr5_+_161427225_161427621	0.0989168	SOX2.p2	NM_000816|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	NM_198903|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	NM_198904|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	BC052926|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	BC036030|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	X15376|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	BC059389|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	BC069348|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	BC074795|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	AK315200|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	AK299640|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2
hg18_v1_chr4_+_113437947_113438006	0.098774	SOX2.p2	NM_001102406|ALPK1|80216|alpha-kinase 1	NM_025144|ALPK1|80216|alpha-kinase 1	AK026323|ALPK1|80216|alpha-kinase 1	AK304708|ALPK1|80216|alpha-kinase 1	AK097246|ALPK1|80216|alpha-kinase 1	BC028117|ALPK1|80216|alpha-kinase 1	AK303489|ALPK1|80216|alpha-kinase 1	BX648798|ALPK1|80216|alpha-kinase 1	BC060780|ALPK1|80216|alpha-kinase 1
hg18_v1_chr7_-_143230096_143230300	0.0987277	SOX2.p2	AB018281|FAM115A|9747|family with sequence similarity 115, member A	NM_014719|FAM115A|9747|family with sequence similarity 115, member A	BC000609|FAM115A|9747|family with sequence similarity 115, member A	AK291605|FAM115A|9747|family with sequence similarity 115, member A	AK001640|FAM115A|9747|family with sequence similarity 115, member A
hg18_v1_chr11_-_14342627_14342627	0.0986631	SOX2.p2	AK300103|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2	NM_001177314|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2
hg18_v1_chr6_+_157141565_157141570	0.0985505	SOX2.p2	AF253515|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)
hg18_v1_chr7_-_148212336_148212382	0.0984897	SOX2.p2	AK303637|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	NM_004456|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	NM_152998|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)
hg18_v1_chr14_+_71065794_71065794	0.0983101	SOX2.p2	AF090989|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1	AF090990|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1	NM_015556|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1
hg18_v1_chr5_-_78845414_78845455	0.0981763	SOX2.p2	BC047438|HOMER1|9456|homer homolog 1 (Drosophila)	NM_004272|HOMER1|9456|homer homolog 1 (Drosophila)
hg18_v1_chr11_-_10786095_10786206	0.097985	SOX2.p2	BC065276|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	NM_001172705|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	BX647799|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	AK123338|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2
hg18_v1_chrX_-_151370325_151370486	0.0979668	SOX2.p2	S62908|GABRA3|2556|gamma-aminobutyric acid (GABA) A receptor, alpha 3	BC028629|GABRA3|2556|gamma-aminobutyric acid (GABA) A receptor, alpha 3	NM_000808|GABRA3|2556|gamma-aminobutyric acid (GABA) A receptor, alpha 3
hg18_v1_chr3_-_192531018_192531018	0.0978688	SOX2.p2	AK090630|UTS2D|257313|urotensin 2 domain containing	NM_198152|UTS2D|257313|urotensin 2 domain containing
hg18_v1_chr14_-_22358752_22358853	0.0977926	SOX2.p2	Y18474|SLC7A7|9056|solute carrier family 7 (cationic amino acid transporter, y+ system), member 7	BX248291|SLC7A7|9056|solute carrier family 7 (cationic amino acid transporter, y+ system), member 7	CR617040|SLC7A7|9056|solute carrier family 7 (cationic amino acid transporter, y+ system), member 7	CR605487|SLC7A7|9056|solute carrier family 7 (cationic amino acid transporter, y+ system), member 7	AF092032|SLC7A7|9056|solute carrier family 7 (cationic amino acid transporter, y+ system), member 7	AJ130718|SLC7A7|9056|solute carrier family 7 (cationic amino acid transporter, y+ system), member 7	CR601579|SLC7A7|9056|solute carrier family 7 (cationic amino acid transporter, y+ system), member 7	NM_001126106|SLC7A7|9056|solute carrier family 7 (cationic amino acid transporter, y+ system), member 7
hg18_v1_chr1_-_11674264_11674293	0.0977765	SOX2.p2	NM_001127325|MAD2L2|10459|MAD2 mitotic arrest deficient-like 2 (yeast)	AK094316|MAD2L2|10459|MAD2 mitotic arrest deficient-like 2 (yeast)
hg18_v1_chr2_-_44440358_44440391	0.0974567	SOX2.p2	BC143061|PREPL|9581|prolyl endopeptidase-like	BC143062|PREPL|9581|prolyl endopeptidase-like	DQ023506|PREPL|9581|prolyl endopeptidase-like	DQ023507|PREPL|9581|prolyl endopeptidase-like	NM_001042385|PREPL|9581|prolyl endopeptidase-like	NM_001042386|PREPL|9581|prolyl endopeptidase-like
hg18_v1_chr1_+_100590619_100590638	0.0973703	SOX2.p2	AF064102|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)
hg18_v1_chrX_+_117410693_117410738	0.0973671	SOX2.p2	AL834210|WDR44|54521|WD repeat domain 44
hg18_v1_chr15_+_82945223_82945347	0.0973574	SOX2.p2	AK128624|ZSCAN2|54993|zinc finger and SCAN domain containing 2	BC041620|ZSCAN2|54993|zinc finger and SCAN domain containing 2	NM_001007072|ZSCAN2|54993|zinc finger and SCAN domain containing 2	NM_017894|ZSCAN2|54993|zinc finger and SCAN domain containing 2	NM_181877|ZSCAN2|54993|zinc finger and SCAN domain containing 2	AK131309|ZSCAN2|54993|zinc finger and SCAN domain containing 2	AK291224|ZSCAN2|54993|zinc finger and SCAN domain containing 2	AK000602|ZSCAN2|54993|zinc finger and SCAN domain containing 2	AY262259|ZSCAN2|54993|zinc finger and SCAN domain containing 2	AY279349|ZSCAN2|54993|zinc finger and SCAN domain containing 2
hg18_v1_chr10_+_69314714_69314882	0.0972946	SOX2.p2	AL136741|SIRT1|23411|sirtuin 1	BC012499|SIRT1|23411|sirtuin 1
hg18_v1_chr18_-_46978029_46978048	0.0972936	SOX2.p2	NM_016626|MEX3C|51320|mex-3 homolog C (C. elegans)
hg18_v1_chr14_-_106170414_106170713	0.0971514	SOX2.p2	AK097355|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)	AK093636|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	AK097572|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)
hg18_v1_chr5_+_90711887_90711949	0.0969758	SOX2.p2	BC043415|LOC100129716|100129716|hypothetical LOC100129716
hg18_v1_chr3_-_116272911_116272950	0.0968061	SOX2.p2	BC090936|ZBTB20|26137|zinc finger and BTB domain containing 20	NM_001164343|ZBTB20|26137|zinc finger and BTB domain containing 20
hg18_v1_chr22_+_42137955_42137967	0.096629	SOX2.p2	AK290541|MPPED1|758|metallophosphoesterase domain containing 1	AK297276|MPPED1|758|metallophosphoesterase domain containing 1	AK299516|MPPED1|758|metallophosphoesterase domain containing 1	AK299531|MPPED1|758|metallophosphoesterase domain containing 1	NM_001044370|MPPED1|758|metallophosphoesterase domain containing 1
hg18_v1_chr1_-_200380477_200380489	0.0965258	SOX2.p2	CR597275|ARL8A|127829|ADP-ribosylation factor-like 8A	NM_138795|ARL8A|127829|ADP-ribosylation factor-like 8A
hg18_v1_chr16_+_30314276_30314347	0.0963119	SOX2.p2	
hg18_v1_chr20_+_19818209_19818245	0.0961472	SOX2.p2	BC128065|RIN2|54453|Ras and Rab interactor 2	NM_018993|RIN2|54453|Ras and Rab interactor 2	AB060339|RIN2|54453|Ras and Rab interactor 2
hg18_v1_chr1_+_39647762_39647762	0.0960601	SOX2.p2	NM_015038|KIAA0754|643314|KIAA0754
hg18_v1_chr1_+_227506751_227506751	0.0958548	SOX2.p2	BC107681|SPHAR|10638|S-phase response (cyclin related)	NM_006542|SPHAR|10638|S-phase response (cyclin related)
hg18_v1_chr3_+_25444753_25444805	0.0957963	SOX2.p2	AF157483|RARB|5915|retinoic acid receptor, beta	NM_016152|RARB|5915|retinoic acid receptor, beta	CR621137|RARB|5915|retinoic acid receptor, beta
hg18_v1_chr2_-_217248967_217249092	0.0956515	SOX2.p2	L27560|IGFBP5|3488|insulin-like growth factor binding protein 5	AF147308|IGFBP5|3488|insulin-like growth factor binding protein 5
hg18_v1_chr1_+_219119430_219119467	0.0953797	SOX2.p2	CR591992|HLX|3142|H2.0-like homeobox
hg18_v1_chr3_+_73193499_73193499	0.0953054	SOX2.p2	BC051316|EBLN2|55096|endogenous Borna-like N element-2	BC064501|EBLN2|55096|endogenous Borna-like N element-2	NM_018029|EBLN2|55096|endogenous Borna-like N element-2
hg18_v1_chr4_-_83569476_83569571	0.0952237	SOX2.p2	D89678|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	AK300122|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	AY453824|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	AB066484|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR590310|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like
hg18_v1_chr16_+_2746363_2746445	0.0952019	SOX2.p2	
hg18_v1_chr7_+_143378393_143378427	0.0950059	SOX2.p2	BC136858|OR2A5|393046|olfactory receptor, family 2, subfamily A, member 5	BC136860|OR2A5|393046|olfactory receptor, family 2, subfamily A, member 5	NM_012365|OR2A5|393046|olfactory receptor, family 2, subfamily A, member 5
hg18_v1_chrX_+_49104714_49104724	0.0950017	SOX2.p2	CR542236|GAGE4|2576|G antigen 4	DQ891160|GAGE5|2577|G antigen 5	DQ894127|GAGE1|2543|G antigen 1	DQ894341|GAGE5|2577|G antigen 5	NM_001098405|GAGE12F|100008586|G antigen 12F	BC069086|GAGE7|2579|G antigen 7
hg18_v1_chr3_-_161765765_161765812	0.0949295	SOX2.p2	AB002533|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)	DQ890866|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)	DQ894021|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)
hg18_v1_chr6_+_43705254_43705286	0.0948988	SOX2.p2	CR624949|MAD2L1BP|9587|MAD2L1 binding protein	NM_001003690|MAD2L1BP|9587|MAD2L1 binding protein	CR595082|MAD2L1BP|9587|MAD2L1 binding protein
hg18_v1_chr2_+_204279624_204279664	0.0948045	SOX2.p2	BC093698|CD28|940|CD28 molecule	BC112085|CD28|940|CD28 molecule	AK292986|CD28|940|CD28 molecule	AF222341|CD28|940|CD28 molecule	AF222342|CD28|940|CD28 molecule	AF222343|CD28|940|CD28 molecule	AJ295273|CD28|940|CD28 molecule
hg18_v1_chr17_+_23722689_23722825	0.094793	SOX2.p2	AK314609|SARM1|23098|sterile alpha and TIR motif containing 1
hg18_v1_chr5_-_140680523_140680549	0.0946743	SOX2.p2	NM_005642|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa
hg18_v1_chr10_+_124885556_124885610	0.09461	SOX2.p2	NM_001105574|HMX3|340784|H6 family homeobox 3
hg18_v1_chr1_-_172258129_172258147	0.0942098	SOX2.p2	
hg18_v1_chr7_-_139825602_139825660	0.0940952	SOX2.p2	CR601180|MKRN1|23608|makorin ring finger protein 1	AB209298|MKRN1|23608|makorin ring finger protein 1	DQ892404|MKRN1|23608|makorin ring finger protein 1	EU176516|MKRN1|23608|makorin ring finger protein 1	BC064838|MKRN1|23608|makorin ring finger protein 1	AM236048|MKRN1|23608|makorin ring finger protein 1	BC037400|MKRN1|23608|makorin ring finger protein 1	BC051821|MKRN1|23608|makorin ring finger protein 1	BC012398|MKRN1|23608|makorin ring finger protein 1	AK297361|MKRN1|23608|makorin ring finger protein 1	AK315552|MKRN1|23608|makorin ring finger protein 1
hg18_v1_chrX_-_41667174_41667365	0.0939646	SOX2.p2	AB208859|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	AY705392|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	AF035582|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	BC117311|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	BC143454|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	BC143456|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	AF032119|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	NM_001126054|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	NM_001126055|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	NM_003688|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	AK313399|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)
hg18_v1_chr10_+_114033403_114033482	0.0937111	SOX2.p2	BC113497|TECTB|6975|tectorin beta	BC113499|TECTB|6975|tectorin beta	AF312827|TECTB|6975|tectorin beta	NM_058222|TECTB|6975|tectorin beta
hg18_v1_chr12_+_43972732_43972732	0.0936264	SOX2.p2	AL832340|ANO6|196527|anoctamin 6	NM_001142678|ANO6|196527|anoctamin 6
hg18_v1_chr6_+_57062760_57062787	0.0936248	SOX2.p2	AY055204|ZNF451|26036|zinc finger protein 451	NM_001031623|ZNF451|26036|zinc finger protein 451	NM_015555|ZNF451|26036|zinc finger protein 451
hg18_v1_chr10_+_69314944_69314966	0.0935904	SOX2.p2	AK289743|SIRT1|23411|sirtuin 1	NM_001142498|SIRT1|23411|sirtuin 1
hg18_v1_chr5_+_176492629_176492643	0.0933884	SOX2.p2	AK126591|NSD1|64324|nuclear receptor binding SET domain protein 1
hg18_v1_chr3_-_47798337_47798339	0.0932795	SOX2.p2	BC050564|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
hg18_v1_chr12_-_38123027_38123505	0.0932603	SOX2.p2	AB051495|KIF21A|55605|kinesin family member 21A	AM177179|KIF21A|55605|kinesin family member 21A	AY368076|KIF21A|55605|kinesin family member 21A	BC136414|KIF21A|55605|kinesin family member 21A	CR624607|KIF21A|55605|kinesin family member 21A	CR624190|KIF21A|55605|kinesin family member 21A	BC041430|KIF21A|55605|kinesin family member 21A	AF155117|KIF21A|55605|kinesin family member 21A	AF450487|KIF21A|55605|kinesin family member 21A	AK000059|KIF21A|55605|kinesin family member 21A	AB290166|KIF21A|55605|kinesin family member 21A	NM_001173463|KIF21A|55605|kinesin family member 21A	NM_001173464|KIF21A|55605|kinesin family member 21A	NM_001173465|KIF21A|55605|kinesin family member 21A	NM_017641|KIF21A|55605|kinesin family member 21A
hg18_v1_chr4_+_57469122_57469266	0.0932395	SOX2.p2	BC132859|REST|5978|RE1-silencing transcription factor	BC136491|REST|5978|RE1-silencing transcription factor
hg18_v1_chr8_-_74821610_74821633	0.093119	SOX2.p2	Y19062|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	AB210014|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	AL079285|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	AK002152|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	AK126149|LOC729696|729696|hypothetical protein LOC729696	AK293496|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	AK303104|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	AK314617|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	BC008369|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	BC008370|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)
hg18_v1_chr9_+_94766379_94766403	0.093117	SOX2.p2	CR591538|FGD3|89846|FYVE, RhoGEF and PH domain containing 3
hg18_v1_chr4_-_83570318_83570437	0.0930571	SOX2.p2	AB017019|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	NM_031372|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like
hg18_v1_chr12_-_120218857_120218924	0.0927456	SOX2.p2	BC026060|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta	AF140507|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta	AF425668|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta	AK300865|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta
hg18_v1_chr5_+_140844810_140844927	0.0927367	SOX2.p2	BC042650|PCDHGC4|56098|protocadherin gamma subfamily C, 4	AF152338|PCDHGC4|56098|protocadherin gamma subfamily C, 4	AF152525|PCDHGC4|56098|protocadherin gamma subfamily C, 4	BC101035|PCDHGC4|56098|protocadherin gamma subfamily C, 4	BC101038|PCDHGC4|56098|protocadherin gamma subfamily C, 4	NM_018928|PCDHGC4|56098|protocadherin gamma subfamily C, 4	NM_032406|PCDHGC4|56098|protocadherin gamma subfamily C, 4	BC101036|PCDHGC4|56098|protocadherin gamma subfamily C, 4
hg18_v1_chr7_+_143043871_143043895	0.0927139	SOX2.p2	NM_001130026|FAM115C|285966|family with sequence similarity 115, member C	AK296318|FAM115C|285966|family with sequence similarity 115, member C
hg18_v1_chr12_-_120218926_120219091	0.0926755	SOX2.p2	NM_172226|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta
hg18_v1_chr3_+_39424109_39424178	0.092636	SOX2.p2	CR605409|RPSA|3921|ribosomal protein SA	CR596726|RPSA|3921|ribosomal protein SA	CR615235|RPSA|3921|ribosomal protein SA	CR618689|RPSA|3921|ribosomal protein SA	BC071970|RPSA|3921|ribosomal protein SA	CR599703|RPSA|3921|ribosomal protein SA	CR620609|RPSA|3921|ribosomal protein SA	CR624266|RPSA|3921|ribosomal protein SA	J03799|RPSA|3921|ribosomal protein SA	NM_001012321|RPSA|3921|ribosomal protein SA	BC068062|RPSA|3921|ribosomal protein SA	BC008867|RPSA|3921|ribosomal protein SA	S37431|RPSA|3921|ribosomal protein SA	DQ891146|RPSA|3921|ribosomal protein SA	DQ894326|RPSA|3921|ribosomal protein SA	BT007219|RPSA|3921|ribosomal protein SA	X61156|RPSA|3921|ribosomal protein SA
hg18_v1_chr22_+_20316968_20317085	0.0925444	SOX2.p2	AK302030|CCDC116|164592|coiled-coil domain containing 116	AK093365|CCDC116|164592|coiled-coil domain containing 116	BC033499|CCDC116|164592|coiled-coil domain containing 116	NM_152612|CCDC116|164592|coiled-coil domain containing 116
hg18_v1_chr1_+_100590640_100590743	0.0923023	SOX2.p2	BC071578|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)	AF064103|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)	AK310657|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)	AF000367|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)
hg18_v1_chr1_+_219119468_219119607	0.0922472	SOX2.p2	AK127923|HLX|3142|H2.0-like homeobox	AK313298|HLX|3142|H2.0-like homeobox	BC033808|HLX|3142|H2.0-like homeobox
hg18_v1_chr12_-_112057650_112057941	0.0921927	SOX2.p2	DQ892315|RASAL1|8437|RAS protein activator like 1 (GAP1 like)	EU176685|RASAL1|8437|RAS protein activator like 1 (GAP1 like)	EU832646|RASAL1|8437|RAS protein activator like 1 (GAP1 like)	EU832723|RASAL1|8437|RAS protein activator like 1 (GAP1 like)	BC093724|RASAL1|8437|RAS protein activator like 1 (GAP1 like)	BC143258|RASAL1|8437|RAS protein activator like 1 (GAP1 like)	BC143261|RASAL1|8437|RAS protein activator like 1 (GAP1 like)	BC143262|RASAL1|8437|RAS protein activator like 1 (GAP1 like)	BC014420|RASAL1|8437|RAS protein activator like 1 (GAP1 like)	AK309562|RASAL1|8437|RAS protein activator like 1 (GAP1 like)	NM_001193521|RASAL1|8437|RAS protein activator like 1 (GAP1 like)
hg18_v1_chr1_+_22176004_22176129	0.0920054	SOX2.p2	NM_007352|CELA3B|23436|chymotrypsin-like elastase family, member 3B	AK092382|CELA3B|23436|chymotrypsin-like elastase family, member 3B	AK308518|CELA3A|10136|chymotrypsin-like elastase family, member 3A	BC005216|CELA3B|23436|chymotrypsin-like elastase family, member 3B	M18692|CELA3B|23436|chymotrypsin-like elastase family, member 3B	AK315798|CELA3B|23436|chymotrypsin-like elastase family, member 3B	AK308510|CELA3A|10136|chymotrypsin-like elastase family, member 3A	M16630|CELA3B|23436|chymotrypsin-like elastase family, member 3B
hg18_v1_chr8_+_10567556_10567580	0.0919854	SOX2.p2	BC065837|C8orf74|203076|chromosome 8 open reading frame 74	BC132852|C8orf74|203076|chromosome 8 open reading frame 74	BC132854|C8orf74|203076|chromosome 8 open reading frame 74	NM_001040032|C8orf74|203076|chromosome 8 open reading frame 74	AK131443|C8orf74|203076|chromosome 8 open reading frame 74	BC038534|C8orf74|203076|chromosome 8 open reading frame 74
hg18_v1_chr3_-_145049853_145050062	0.0919661	SOX2.p2	AB089794|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9	AL832304|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9	AY254100|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9	BC035779|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9	AK315107|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9	AK301816|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9	NM_173653|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9
hg18_v1_chr17_-_36594652_36594672	0.0919333	SOX2.p2	BC103845|KRTAP4-1|85285|keratin associated protein 4-1	BC103846|KRTAP4-1|85285|keratin associated protein 4-1	AJ406942|KRTAP4-1|85285|keratin associated protein 4-1	NM_033060|KRTAP4-1|85285|keratin associated protein 4-1
hg18_v1_chr3_-_47909001_47909068	0.0918497	SOX2.p2	AK054696|MAP4|4134|microtubule-associated protein 4
hg18_v1_chrX_+_49213543_49213553	0.0918413	SOX2.p2	CR542236|GAGE4|2576|G antigen 4	DQ891160|GAGE5|2577|G antigen 5	NM_001098405|GAGE12F|100008586|G antigen 12F	U19144|GAGE3|2575|G antigen 3	BC069086|GAGE7|2579|G antigen 7
hg18_v1_chr10_-_30356344_30356531	0.0918137	SOX2.p2	BC047548|KIAA1462|57608|KIAA1462
hg18_v1_chr16_+_68238460_68238571	0.0917772	SOX2.p2	AF134870|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive
hg18_v1_chr9_+_27099138_27099146	0.0916838	SOX2.p2	AK294887|TEK|7010|TEK tyrosine kinase, endothelial	NM_000459|TEK|7010|TEK tyrosine kinase, endothelial
hg18_v1_chr22_+_36712116_36712121	0.0916237	SOX2.p2	AK098727|LOC100131530|100131530|hypothetical LOC100131530
hg18_v1_chr11_+_125258718_125258718	0.0914556	SOX2.p2	AK057477|HYLS1|219844|hydrolethalus syndrome 1	NM_145014|HYLS1|219844|hydrolethalus syndrome 1
hg18_v1_chr1_+_87567164_87567375	0.0913801	SOX2.p2	BC017673|LMO4|8543|LIM domain only 4	BC003600|LMO4|8543|LIM domain only 4
hg18_v1_chr2_+_169631777_169631965	0.0910846	SOX2.p2	AY017349|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9	NM_199204|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9	AK296625|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9	BC051797|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9	AK313220|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9
hg18_v1_chr7_+_113853790_113853942	0.0910767	SOX2.p2	AF467253|FOXP2|93986|forkhead box P2	NM_001172767|FOXP2|93986|forkhead box P2	NM_148899|FOXP2|93986|forkhead box P2	AF467258|FOXP2|93986|forkhead box P2	AF467259|FOXP2|93986|forkhead box P2
hg18_v1_chr5_+_140187746_140187860	0.090928	SOX2.p2	BC036674|PCDHA6|56142|protocadherin alpha 6	AF169694|PCDHA6|56142|protocadherin alpha 6	NM_018909|PCDHA6|56142|protocadherin alpha 6	NM_031848|PCDHA6|56142|protocadherin alpha 6	NM_031849|PCDHA6|56142|protocadherin alpha 6	AF152314|PCDHA6|56142|protocadherin alpha 6	AF152484|PCDHA6|56142|protocadherin alpha 6
hg18_v1_chr7_+_94130673_94130691	0.0908759	SOX2.p2	AB049834|PEG10|23089|paternally expressed 10
hg18_v1_chr17_-_10313600_10313600	0.0906664	SOX2.p2	AF111783|MYH4|4622|myosin, heavy chain 4, skeletal muscle	NM_017533|MYH4|4622|myosin, heavy chain 4, skeletal muscle
hg18_v1_chr1_+_170768914_170769094	0.0906137	SOX2.p2	NM_016227|C1orf9|51430|chromosome 1 open reading frame 9	AK302509|C1orf9|51430|chromosome 1 open reading frame 9	AL035291|C1orf9|51430|chromosome 1 open reading frame 9	BC137125|C1orf9|51430|chromosome 1 open reading frame 9	BC144487|C1orf9|51430|chromosome 1 open reading frame 9
hg18_v1_chr17_+_58625086_58625100	0.0905779	SOX2.p2	BC144357|TANC2|26115|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
hg18_v1_chrX_-_137649180_137649180	0.090479	SOX2.p2	AF100144|FGF13|2258|fibroblast growth factor 13	NM_033642|FGF13|2258|fibroblast growth factor 13
hg18_v1_chr7_-_148212312_148212316	0.0904694	SOX2.p2	AK314291|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)
hg18_v1_chr3_+_156280338_156280398	0.0904624	SOX2.p2	NM_007287|MME|4311|membrane metallo-endopeptidase
hg18_v1_chr5_+_72504778_72504796	0.090328	SOX2.p2	AK315460|TMEM174|134288|transmembrane protein 174	NM_153217|TMEM174|134288|transmembrane protein 174	AK055830|TMEM174|134288|transmembrane protein 174
hg18_v1_chr4_-_47678187_47678306	0.0901238	SOX2.p2	M84741|CNGA1|1259|cyclic nucleotide gated channel alpha 1	NM_001142564|CNGA1|1259|cyclic nucleotide gated channel alpha 1	S42457|CNGA1|1259|cyclic nucleotide gated channel alpha 1
hg18_v1_chr15_+_21361901_21362021	0.0900964	SOX2.p2	BC044639|MKRN3|7681|makorin ring finger protein 3	BC070293|MKRN3|7681|makorin ring finger protein 3	EU446987|MKRN3|7681|makorin ring finger protein 3
hg18_v1_chr7_-_148212310_148212311	0.0900392	SOX2.p2	AK293239|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	AK303585|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)
hg18_v1_chr11_+_5798119_5798141	0.0900242	SOX2.p2	BC140732|OR52N2|390077|olfactory receptor, family 52, subfamily N, member 2	NM_001005174|OR52N2|390077|olfactory receptor, family 52, subfamily N, member 2
hg18_v1_chr9_-_14388981_14388981	0.089794	SOX2.p2	AK131233|NFIB|4781|nuclear factor I/B	NM_001190738|NFIB|4781|nuclear factor I/B
hg18_v1_chr9_+_123501186_123501469	0.089745	SOX2.p2	AF367051|DAB2IP|153090|DAB2 interacting protein
hg18_v1_chr2_+_127130209_127130315	0.0896804	SOX2.p2	CR600006|GYPC|2995|glycophorin C (Gerbich blood group)	CR622291|GYPC|2995|glycophorin C (Gerbich blood group)	CR600264|GYPC|2995|glycophorin C (Gerbich blood group)	CR614686|GYPC|2995|glycophorin C (Gerbich blood group)	BC016653|GYPC|2995|glycophorin C (Gerbich blood group)	M11802|GYPC|2995|glycophorin C (Gerbich blood group)	M36284|GYPC|2995|glycophorin C (Gerbich blood group)	X51973|GYPC|2995|glycophorin C (Gerbich blood group)	M28335|GYPC|2995|glycophorin C (Gerbich blood group)
hg18_v1_chr21_-_39642880_39642920	0.0896258	SOX2.p2	CR597521|HMGN1|3150|high-mobility group nucleosome binding domain 1	NM_004965|HMGN1|3150|high-mobility group nucleosome binding domain 1	BC107741|HMGN1|3150|high-mobility group nucleosome binding domain 1
hg18_v1_chr8_-_145099963_145100075	0.0895655	SOX2.p2	AY480046|PLEC|5339|plectin	NM_201379|PLEC|5339|plectin
hg18_v1_chr1_+_157526127_157526127	0.0895261	SOX2.p2	NM_002001|FCER1A|2205|Fc fragment of IgE, high affinity I, receptor for; alpha polypeptide	X06948|FCER1A|2205|Fc fragment of IgE, high affinity I, receptor for; alpha polypeptide
hg18_v1_chr14_+_73884947_73884964	0.0894648	SOX2.p2	BC053325|VRTN|55237|vertebrae development homolog (pig)	AK023213|VRTN|55237|vertebrae development homolog (pig)	AK001673|VRTN|55237|vertebrae development homolog (pig)
hg18_v1_chr14_+_59782222_59782227	0.0894384	SOX2.p2	AK097843|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A	NM_177952|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A	AK313337|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A
hg18_v1_chr6_-_56824672_56824674	0.0893863	SOX2.p2	AK299898|DST|667|dystonin
hg18_v1_chr2_+_12774264_12775144	0.0892508	SOX2.p2	NM_021643|TRIB2|28951|tribbles homolog 2 (Drosophila)	AY245544|TRIB2|28951|tribbles homolog 2 (Drosophila)	AK299146|TRIB2|28951|tribbles homolog 2 (Drosophila)	D87119|TRIB2|28951|tribbles homolog 2 (Drosophila)
hg18_v1_chr15_-_62782399_62782413	0.0891699	SOX2.p2	BC119629|OAZ2|4947|ornithine decarboxylase antizyme 2	BC119630|OAZ2|4947|ornithine decarboxylase antizyme 2	BC148316|OAZ2|4947|ornithine decarboxylase antizyme 2	BC127630|OAZ2|4947|ornithine decarboxylase antizyme 2	BC127631|OAZ2|4947|ornithine decarboxylase antizyme 2
hg18_v1_chr1_+_243065537_243065589	0.0890233	SOX2.p2	AK130498|FAM36A|116228|family with sequence similarity 36, member A	BC062419|FAM36A|116228|family with sequence similarity 36, member A	BC018519|FAM36A|116228|family with sequence similarity 36, member A
hg18_v1_chr11_-_10786610_10786654	0.088947	SOX2.p2	AK302886|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	AK310738|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2
hg18_v1_chr20_+_2743613_2743679	0.0888715	SOX2.p2	AK312218|C20orf141|128653|chromosome 20 open reading frame 141	BC014591|C20orf141|128653|chromosome 20 open reading frame 141	NM_080739|C20orf141|128653|chromosome 20 open reading frame 141	AL713708|C20orf141|128653|chromosome 20 open reading frame 141
hg18_v1_chr1_+_164063684_164063736	0.0886329	SOX2.p2	AF236637|UCK2|7371|uridine-cytidine kinase 2	AK294537|UCK2|7371|uridine-cytidine kinase 2	AB062451|UCK2|7371|uridine-cytidine kinase 2
hg18_v1_chr1_-_51560469_51560525	0.0885698	SOX2.p2	BC028374|TTC39A|22996|tetratricopeptide repeat domain 39A	NM_001080494|TTC39A|22996|tetratricopeptide repeat domain 39A
hg18_v1_chr5_+_79651545_79651598	0.0883252	SOX2.p2	NM_032567|SPZ1|84654|spermatogenic leucine zipper 1	AK098575|SPZ1|84654|spermatogenic leucine zipper 1	AK314007|SPZ1|84654|spermatogenic leucine zipper 1	AF333098|SPZ1|84654|spermatogenic leucine zipper 1	BC033798|SPZ1|84654|spermatogenic leucine zipper 1
hg18_v1_chr7_-_25234582_25234629	0.0882366	SOX2.p2	AB040290|NPVF|64111|neuropeptide VF precursor	AF330057|NPVF|64111|neuropeptide VF precursor	AF440392|NPVF|64111|neuropeptide VF precursor	NM_022150|NPVF|64111|neuropeptide VF precursor
hg18_v1_chr17_-_16038607_16038680	0.0881102	SOX2.p2	AB028970|NCOR1|9611|nuclear receptor corepressor 1	BC167431|NCOR1|9611|nuclear receptor corepressor 1	NM_001190438|NCOR1|9611|nuclear receptor corepressor 1	NM_001190440|NCOR1|9611|nuclear receptor corepressor 1	AF087856|NCOR1|9611|nuclear receptor corepressor 1	AF303586|NCOR1|9611|nuclear receptor corepressor 1
hg18_v1_chr1_+_110683580_110683580	0.0879762	SOX2.p2	BC047479|RBM15|64783|RNA binding motif protein 15
hg18_v1_chr6_-_33016561_33016824	0.0878381	SOX2.p2	CR407606|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	DQ891141|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	DQ894320|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	BC027175|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	CR594625|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	Z23139|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	AB209577|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	CR591828|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	AK315979|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	CR611765|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	AK295872|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	AY645722|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	U15085|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	NM_002118|HLA-DMB|3109|major histocompatibility complex, class II, DM beta
hg18_v1_chr3_-_50335113_50335284	0.0877763	SOX2.p2	AK225635|HYAL2|8692|hyaluronoglucosaminidase 2	AJ000099|HYAL2|8692|hyaluronoglucosaminidase 2	U09577|HYAL2|8692|hyaluronoglucosaminidase 2	CR595904|HYAL2|8692|hyaluronoglucosaminidase 2	CR597868|HYAL2|8692|hyaluronoglucosaminidase 2	AK092449|HYAL2|8692|hyaluronoglucosaminidase 2	AK310963|HYAL2|8692|hyaluronoglucosaminidase 2	AK127945|HYAL2|8692|hyaluronoglucosaminidase 2	NM_003773|HYAL2|8692|hyaluronoglucosaminidase 2	NM_033158|HYAL2|8692|hyaluronoglucosaminidase 2
hg18_v1_chr17_-_40339919_40339965	0.0876436	SOX2.p2	CR591619|GFAP|2670|glial fibrillary acidic protein
hg18_v1_chr6_-_108386013_108386040	0.0874798	SOX2.p2	BC048287|SEC63|11231|SEC63 homolog (S. cerevisiae)	AK001465|SEC63|11231|SEC63 homolog (S. cerevisiae)	BC047221|SEC63|11231|SEC63 homolog (S. cerevisiae)
hg18_v1_chr1_-_33587998_33588083	0.0874719	SOX2.p2	AK128821|PHC2|1912|polyhomeotic homolog 2 (Drosophila)	BC028396|PHC2|1912|polyhomeotic homolog 2 (Drosophila)	BC018602|PHC2|1912|polyhomeotic homolog 2 (Drosophila)
hg18_v1_chr6_+_64414389_64414414	0.0873456	SOX2.p2	AF091622|PHF3|23469|PHD finger protein 3	BC113650|PHF3|23469|PHD finger protein 3	BC113652|PHF3|23469|PHD finger protein 3	NM_015153|PHF3|23469|PHD finger protein 3	D87685|PHF3|23469|PHD finger protein 3
hg18_v1_chr3_-_10124763_10124914	0.0872433	SOX2.p2	AY248899|C3orf24|115795|chromosome 3 open reading frame 24	AF230334|C3orf24|115795|chromosome 3 open reading frame 24	BC028122|C3orf24|115795|chromosome 3 open reading frame 24	NM_001164839|C3orf24|115795|chromosome 3 open reading frame 24	NM_173472|C3orf24|115795|chromosome 3 open reading frame 24
hg18_v1_chr1_+_243065590_243065628	0.0872129	SOX2.p2	AK000866|FAM36A|116228|family with sequence similarity 36, member A	BC095486|FAM36A|116228|family with sequence similarity 36, member A	AK300760|FAM36A|116228|family with sequence similarity 36, member A	BC064399|FAM36A|116228|family with sequence similarity 36, member A	AF086182|FAM36A|116228|family with sequence similarity 36, member A
hg18_v1_chr14_+_69307914_69308067	0.0872124	SOX2.p2	CR622610|SRSF5|6430|serine/arginine-rich splicing factor 5
hg18_v1_chr8_-_105670410_105670437	0.0871741	SOX2.p2	AF064841|LRP12|29967|low density lipoprotein receptor-related protein 12	AK299374|LRP12|29967|low density lipoprotein receptor-related protein 12	NM_001135703|LRP12|29967|low density lipoprotein receptor-related protein 12	NM_013437|LRP12|29967|low density lipoprotein receptor-related protein 12
hg18_v1_chr17_+_3518834_3518864	0.0869746	SOX2.p2	CR609408|TMEM93|83460|transmembrane protein 93	NM_001014764|TMEM93|83460|transmembrane protein 93	NM_031298|TMEM93|83460|transmembrane protein 93	BC001409|TMEM93|83460|transmembrane protein 93
hg18_v1_chr18_+_70317548_70317603	0.0869491	SOX2.p2	AK097155|CNDP2|55748|CNDP dipeptidase 2 (metallopeptidase M20 family)
hg18_v1_chr5_+_140719773_140719886	0.086926	SOX2.p2	BC101805|PCDHGB2|56103|protocadherin gamma subfamily B, 2	AF152331|PCDHGB2|56103|protocadherin gamma subfamily B, 2	AF152518|PCDHGB2|56103|protocadherin gamma subfamily B, 2	NM_018923|PCDHGB2|56103|protocadherin gamma subfamily B, 2	NM_032096|PCDHGB2|56103|protocadherin gamma subfamily B, 2
hg18_v1_chr1_-_233558117_233558154	0.0869217	SOX2.p2	AF214114|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)	AK057552|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)	NM_016374|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)	NM_031371|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)
hg18_v1_chr7_+_153633127_153633510	0.0867631	SOX2.p2	AK309760|DPP6|1804|dipeptidyl-peptidase 6	AK308993|DPP6|1804|dipeptidyl-peptidase 6	AK293582|DPP6|1804|dipeptidyl-peptidase 6	NM_001936|DPP6|1804|dipeptidyl-peptidase 6	M96860|DPP6|1804|dipeptidyl-peptidase 6	AK294483|DPP6|1804|dipeptidyl-peptidase 6
hg18_v1_chr3_-_170346760_170346786	0.0867146	SOX2.p2	BC130520|MECOM|2122|MDS1 and EVI1 complex locus	BC143951|MECOM|2122|MDS1 and EVI1 complex locus	BC143952|MECOM|2122|MDS1 and EVI1 complex locus	AF164154|MECOM|2122|MDS1 and EVI1 complex locus	AF164155|MECOM|2122|MDS1 and EVI1 complex locus	AF164156|MECOM|2122|MDS1 and EVI1 complex locus	AF164157|MECOM|2122|MDS1 and EVI1 complex locus	NM_001105077|MECOM|2122|MDS1 and EVI1 complex locus	NM_001163999|MECOM|2122|MDS1 and EVI1 complex locus	NM_005241|MECOM|2122|MDS1 and EVI1 complex locus	X54989|MECOM|2122|MDS1 and EVI1 complex locus
hg18_v1_chr7_-_16471817_16471998	0.0867036	SOX2.p2	AB059270|SOSTDC1|25928|sclerostin domain containing 1	CR614752|SOSTDC1|25928|sclerostin domain containing 1	AK315682|SOSTDC1|25928|sclerostin domain containing 1	BC008484|SOSTDC1|25928|sclerostin domain containing 1	CR606874|SOSTDC1|25928|sclerostin domain containing 1	AF361494|SOSTDC1|25928|sclerostin domain containing 1	NM_015464|SOSTDC1|25928|sclerostin domain containing 1
hg18_v1_chr21_+_32585994_32585994	0.0865991	SOX2.p2	AF454915|MRAP|56246|melanocortin 2 receptor accessory protein	AF454916|MRAP|56246|melanocortin 2 receptor accessory protein	NM_178817|MRAP|56246|melanocortin 2 receptor accessory protein	NM_206898|MRAP|56246|melanocortin 2 receptor accessory protein
hg18_v1_chr9_-_73715666_73715825	0.0864978	SOX2.p2	AF151825|FAM108B1|51104|family with sequence similarity 108, member B1
hg18_v1_chr6_-_105957669_105957707	0.0862889	SOX2.p2	AK314195|PREP|5550|prolyl endopeptidase	NM_002726|PREP|5550|prolyl endopeptidase
hg18_v1_chr2_-_74455161_74455369	0.0862503	SOX2.p2	AK315014|DCTN1|1639|dynactin 1	BC071583|DCTN1|1639|dynactin 1	NM_001135041|DCTN1|1639|dynactin 1	NM_023019|DCTN1|1639|dynactin 1
hg18_v1_chr3_-_25680723_25681235	0.0862046	SOX2.p2	NM_001068|TOP2B|7155|topoisomerase (DNA) II beta 180kDa	X68060|TOP2B|7155|topoisomerase (DNA) II beta 180kDa	Z15111|TOP2B|7155|topoisomerase (DNA) II beta 180kDa
hg18_v1_chr2_+_149349643_149349656	0.0860791	SOX2.p2	
hg18_v1_chr13_-_107317460_107317460	0.0860281	SOX2.p2	NM_001080396|FAM155A|728215|family with sequence similarity 155, member A
hg18_v1_chr21_-_44926485_44926505	0.0859949	SOX2.p2	AB076363|KRTAP12-1|353332|keratin associated protein 12-1	BC127648|KRTAP12-1|353332|keratin associated protein 12-1	BC119713|KRTAP12-1|353332|keratin associated protein 12-1	BC120942|KRTAP12-1|353332|keratin associated protein 12-1	AJ566388|KRTAP12-1|353332|keratin associated protein 12-1	NM_181686|KRTAP12-1|353332|keratin associated protein 12-1
hg18_v1_chr1_+_170768635_170768896	0.0859698	SOX2.p2	AK302949|C1orf9|51430|chromosome 1 open reading frame 9	AJ250075|C1orf9|51430|chromosome 1 open reading frame 9	NM_014283|C1orf9|51430|chromosome 1 open reading frame 9
hg18_v1_chr12_-_122322117_122322775	0.0859206	SOX2.p2	DQ891281|CDK2AP1|8099|cyclin-dependent kinase 2 associated protein 1	DQ894468|CDK2AP1|8099|cyclin-dependent kinase 2 associated protein 1	BC034717|CDK2AP1|8099|cyclin-dependent kinase 2 associated protein 1	AB006077|CDK2AP1|8099|cyclin-dependent kinase 2 associated protein 1	CR604217|CDK2AP1|8099|cyclin-dependent kinase 2 associated protein 1	CR598800|CDK2AP1|8099|cyclin-dependent kinase 2 associated protein 1	AF006484|CDK2AP1|8099|cyclin-dependent kinase 2 associated protein 1	NM_004642|CDK2AP1|8099|cyclin-dependent kinase 2 associated protein 1
hg18_v1_chr6_-_32268267_32268419	0.085895	SOX2.p2	AF155657|GPSM3|63940|G-protein signaling modulator 3	BC018724|GPSM3|63940|G-protein signaling modulator 3
hg18_v1_chr15_+_46285789_46285790	0.08581	SOX2.p2	NM_000338|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1	NM_001184832|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1	AK129998|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1	AK298312|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1
hg18_v1_chr18_-_51406359_51406477	0.0855432	SOX2.p2	M74719|TCF4|6925|transcription factor 4
hg18_v1_chr3_+_39346200_39346298	0.0852899	SOX2.p2	AK314957|CCR8|1237|chemokine (C-C motif) receptor 8	NM_005201|CCR8|1237|chemokine (C-C motif) receptor 8	AF005210|CCR8|1237|chemokine (C-C motif) receptor 8	BC107152|CCR8|1237|chemokine (C-C motif) receptor 8	BC107159|CCR8|1237|chemokine (C-C motif) receptor 8	D49919|CCR8|1237|chemokine (C-C motif) receptor 8	BC074743|CCR8|1237|chemokine (C-C motif) receptor 8
hg18_v1_chr5_+_140751666_140751666	0.0852474	SOX2.p2	NM_014004|PCDHGA8|9708|protocadherin gamma subfamily A, 8	NM_032088|PCDHGA8|9708|protocadherin gamma subfamily A, 8
hg18_v1_chr1_-_233558071_233558110	0.0852231	SOX2.p2	BC130418|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)	BC143719|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)	BC062536|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)	BX648820|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)
hg18_v1_chr1_+_183281173_183281321	0.085184	SOX2.p2	NM_007212|RNF2|6045|ring finger protein 2	AF141327|RNF2|6045|ring finger protein 2	CR597914|RNF2|6045|ring finger protein 2	AK091574|RNF2|6045|ring finger protein 2	BC012583|RNF2|6045|ring finger protein 2	AK314793|RNF2|6045|ring finger protein 2
hg18_v1_chr10_+_49184658_49184926	0.085075	SOX2.p2	CR614448|MAPK8|5599|mitogen-activated protein kinase 8	AK292523|MAPK8|5599|mitogen-activated protein kinase 8
hg18_v1_chr4_-_184817098_184817374	0.0849614	SOX2.p2	BC107432|RWDD4|201965|RWD domain containing 4	CR615824|RWDD4|201965|RWD domain containing 4	AK021702|RWDD4|201965|RWD domain containing 4	AK293274|RWDD4|201965|RWD domain containing 4	AK315515|RWDD4|201965|RWD domain containing 4	BC017472|RWDD4|201965|RWD domain containing 4	CR606158|RWDD4|201965|RWD domain containing 4	CR606628|RWDD4|201965|RWD domain containing 4	CR610616|RWDD4|201965|RWD domain containing 4	CR626168|RWDD4|201965|RWD domain containing 4	BC067752|RWDD4|201965|RWD domain containing 4	NM_152682|RWDD4|201965|RWD domain containing 4
hg18_v1_chr13_-_45087859_45087874	0.0849584	SOX2.p2	BC131494|FAM194B|220081|family with sequence similarity 194, member B	AK057244|FAM194B|220081|family with sequence similarity 194, member B	NM_182542|FAM194B|220081|family with sequence similarity 194, member B
hg18_v1_chr16_+_68284252_68284329	0.084649	SOX2.p2	U80231|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive	AK000312|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive
hg18_v1_chr2_-_38379031_38379115	0.0846021	SOX2.p2	AK316179|ATL2|64225|atlastin GTPase 2
hg18_v1_chr11_+_16716723_16716749	0.0843676	SOX2.p2	NM_014267|C11orf58|10944|chromosome 11 open reading frame 58
hg18_v1_chr15_+_20444124_20444136	0.084313	SOX2.p2	NM_014608|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1
hg18_v1_chr19_+_56452775_56452775	0.0841159	SOX2.p2	AK097554|C19orf75|284369|chromosome 19 open reading frame 75	NM_173635|C19orf75|284369|chromosome 19 open reading frame 75
hg18_v1_chr11_+_128068982_128069034	0.0840193	SOX2.p2	NM_002017|FLI1|2313|Friend leukemia virus integration 1
hg18_v1_chr10_-_91092410_91092461	0.0838727	SOX2.p2	AK091558|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase
hg18_v1_chr3_-_161766055_161766110	0.0838236	SOX2.p2	BC034493|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)	NM_002268|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)
hg18_v1_chr3_-_193928038_193928081	0.0838207	SOX2.p2	AK312513|FGF12|2257|fibroblast growth factor 12	BC022524|FGF12|2257|fibroblast growth factor 12	NM_004113|FGF12|2257|fibroblast growth factor 12
hg18_v1_chr17_-_928960_928990	0.0836807	SOX2.p2	AK299909|ABR|29|active BCR-related gene
hg18_v1_chr19_-_17236522_17236572	0.0836318	SOX2.p2	AB026290|USHBP1|83878|Usher syndrome 1C binding protein 1	AB040046|USHBP1|83878|Usher syndrome 1C binding protein 1	AK300617|USHBP1|83878|Usher syndrome 1C binding protein 1	CR599813|USHBP1|83878|Usher syndrome 1C binding protein 1	AK096028|USHBP1|83878|Usher syndrome 1C binding protein 1	BC027910|USHBP1|83878|Usher syndrome 1C binding protein 1	NM_031941|USHBP1|83878|Usher syndrome 1C binding protein 1	AK315239|USHBP1|83878|Usher syndrome 1C binding protein 1	AK292031|USHBP1|83878|Usher syndrome 1C binding protein 1
hg18_v1_chr13_-_102517196_102517196	0.0834753	SOX2.p2	NM_000452|SLC10A2|6555|solute carrier family 10 (sodium/bile acid cotransporter family), member 2	U10417|SLC10A2|6555|solute carrier family 10 (sodium/bile acid cotransporter family), member 2
hg18_v1_chr1_-_151780720_151780864	0.0834504	SOX2.p2	BC093955|S100A5|6276|S100 calcium binding protein A5	BC093957|S100A5|6276|S100 calcium binding protein A5	NM_002962|S100A5|6276|S100 calcium binding protein A5	Z18954|S100A5|6276|S100 calcium binding protein A5
hg18_v1_chr3_+_185516630_185516672	0.0834373	SOX2.p2	AF002816|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AF104913|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AK294567|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1
hg18_v1_chr10_+_22645304_22645357	0.0831456	SOX2.p2	NM_012071|COMMD3|23412|COMM domain containing 3	BX647275|COMMD3|23412|COMM domain containing 3	AF201948|COMMD3|23412|COMM domain containing 3	CR625344|COMMD3|23412|COMM domain containing 3	BC022898|COMMD3|23412|COMM domain containing 3	AF078848|COMMD3|23412|COMM domain containing 3	AK128789|COMMD3|23412|COMM domain containing 3	AK313235|COMMD3-BMI1|100532731|COMMD3-BMI1 read-through transcript	AY542159|COMMD3|23412|COMM domain containing 3	CR596018|COMMD3|23412|COMM domain containing 3	CR610659|COMMD3|23412|COMM domain containing 3	CR612205|COMMD3|23412|COMM domain containing 3
hg18_v1_chr3_-_47798308_47798336	0.0831013	SOX2.p2	BC039843|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	U66615|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
hg18_v1_chr9_-_124370576_124370658	0.0829973	SOX2.p2	NM_001004454|OR1L8|138881|olfactory receptor, family 1, subfamily L, member 8	BC140910|OR1L8|138881|olfactory receptor, family 1, subfamily L, member 8
hg18_v1_chr9_-_139316523_139316559	0.0829491	SOX2.p2	BC053618|NRARP|441478|NOTCH-regulated ankyrin repeat protein	NM_001004354|NRARP|441478|NOTCH-regulated ankyrin repeat protein
hg18_v1_chr20_-_29751755_29751762	0.0829358	SOX2.p2	
hg18_v1_chr10_+_91488704_91488791	0.0827207	SOX2.p2	AK025628|KIF20B|9585|kinesin family member 20B
hg18_v1_chr1_+_224317044_224317055	0.0826736	SOX2.p2	AK291102|LOC440926|440926|H3 histone, family 3A pseudogene	AK293541|H3F3A|3020|H3 histone, family 3A	BC029405|H3F3A|3020|H3 histone, family 3A	BC067757|LOC440926|440926|H3 histone, family 3A pseudogene	BC095447|H3F3A|3020|H3 histone, family 3A	M11354|H3F3A|3020|H3 histone, family 3A	CR616566|LOC440926|440926|H3 histone, family 3A pseudogene	BC066901|LOC440926|440926|H3 histone, family 3A pseudogene	CR592641|H3F3A|3020|H3 histone, family 3A	CR618614|LOC440926|440926|H3 histone, family 3A pseudogene	CR620119|LOC440926|440926|H3 histone, family 3A pseudogene
hg18_v1_chr1_+_26896519_26896593	0.0826628	SOX2.p2	AB210022|ARID1A|8289|AT rich interactive domain 1A (SWI-like)	AF219114|ARID1A|8289|AT rich interactive domain 1A (SWI-like)	AF265208|ARID1A|8289|AT rich interactive domain 1A (SWI-like)
hg18_v1_chr17_-_24163517_24163629	0.0824499	SOX2.p2	AK095569|C17orf63|55731|chromosome 17 open reading frame 63
hg18_v1_chr5_-_114659863_114659885	0.0823993	SOX2.p2	BC031242|CCDC112|153733|coiled-coil domain containing 112	NM_152549|CCDC112|153733|coiled-coil domain containing 112
hg18_v1_chr1_-_150353179_150353179	0.0822329	SOX2.p2	NM_007113|TCHH|7062|trichohyalin
hg18_v1_chr1_-_199742871_199743009	0.0821881	SOX2.p2	CR614180|CSRP1|1465|cysteine and glycine-rich protein 1	CR625797|CSRP1|1465|cysteine and glycine-rich protein 1	AK057876|CSRP1|1465|cysteine and glycine-rich protein 1	AK122812|CSRP1|1465|cysteine and glycine-rich protein 1	AK302237|CSRP1|1465|cysteine and glycine-rich protein 1	AK304415|CSRP1|1465|cysteine and glycine-rich protein 1	NM_001193570|CSRP1|1465|cysteine and glycine-rich protein 1	NM_004078|CSRP1|1465|cysteine and glycine-rich protein 1
hg18_v1_chr1_-_210070736_210070771	0.0821005	SOX2.p2	D86960|LPGAT1|9926|lysophosphatidylglycerol acyltransferase 1	NM_014873|LPGAT1|9926|lysophosphatidylglycerol acyltransferase 1
hg18_v1_chr5_-_14924555_14925155	0.082089	SOX2.p2	DQ892588|ANKH|56172|ankylosis, progressive homolog (mouse)	DQ895806|ANKH|56172|ankylosis, progressive homolog (mouse)	AK222631|ANKH|56172|ankylosis, progressive homolog (mouse)	AK315012|ANKH|56172|ankylosis, progressive homolog (mouse)	BC014526|ANKH|56172|ankylosis, progressive homolog (mouse)	AF274753|ANKH|56172|ankylosis, progressive homolog (mouse)	AY358503|ANKH|56172|ankylosis, progressive homolog (mouse)	AB046801|ANKH|56172|ankylosis, progressive homolog (mouse)	BC009835|ANKH|56172|ankylosis, progressive homolog (mouse)	NM_054027|ANKH|56172|ankylosis, progressive homolog (mouse)
hg18_v1_chr6_+_43846372_43846652	0.0819662	SOX2.p2	BC011177|VEGFA|7422|vascular endothelial growth factor A	BC065522|VEGFA|7422|vascular endothelial growth factor A
hg18_v1_chr4_+_3264509_3264607	0.0818038	SOX2.p2	AK310999|RGS12|6002|regulator of G-protein signaling 12	BC028154|RGS12|6002|regulator of G-protein signaling 12
hg18_v1_chr8_+_11697680_11697700	0.0818024	SOX2.p2	CR602686|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	BC003573|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	BC009251|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR605887|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR598732|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR610871|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR622798|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	S76822|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR602602|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR595075|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1
hg18_v1_chr15_+_54998115_54998124	0.0817661	SOX2.p2	NM_003205|TCF12|6938|transcription factor 12	NM_207036|TCF12|6938|transcription factor 12	NM_207037|TCF12|6938|transcription factor 12	NM_207038|TCF12|6938|transcription factor 12
hg18_v1_chr2_+_157822355_157822723	0.0815552	SOX2.p2	BC142676|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)	BC142703|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)	AY277591|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)	NM_014568|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)	AK292154|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)	BC144211|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)
hg18_v1_chr10_+_35455986_35456061	0.0815003	SOX2.p2	CR613240|CREM|1390|cAMP responsive element modulator
hg18_v1_chrX_+_36163971_36163971	0.0814778	SOX2.p2	NM_001098843|CXorf30|645090|chromosome X open reading frame 30
hg18_v1_chr21_+_37713076_37713076	0.0813609	SOX2.p2	D86550|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A	NM_130436|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A
hg18_v1_chr5_-_134762738_134762758	0.0812089	SOX2.p2	CR599382|H2AFY|9555|H2A histone family, member Y	CR622217|H2AFY|9555|H2A histone family, member Y
hg18_v1_chr1_-_233558114_233558115	0.0811984	SOX2.p2	BC048959|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)
hg18_v1_chr7_-_115458010_115458034	0.0811018	SOX2.p2	D43945|TFEC|22797|transcription factor EC	BC029891|TFEC|22797|transcription factor EC	NM_001018058|TFEC|22797|transcription factor EC	NM_012252|TFEC|22797|transcription factor EC
hg18_v1_chr18_-_3209986_3210105	0.0810851	SOX2.p2	AJ621424|MYOM1|8736|myomesin 1, 185kDa	AK125322|MYOM1|8736|myomesin 1, 185kDa	NM_003803|MYOM1|8736|myomesin 1, 185kDa	NM_019856|MYOM1|8736|myomesin 1, 185kDa
hg18_v1_chr22_+_25398690_25398790	0.0810122	SOX2.p2	AK026502|LOC388889|388889|hypothetical LOC388889
hg18_v1_chr4_+_83570749_83570788	0.0809659	SOX2.p2	NM_021204|ENOPH1|58478|enolase-phosphatase 1	AF087881|ENOPH1|58478|enolase-phosphatase 1	AF113125|ENOPH1|58478|enolase-phosphatase 1
hg18_v1_chr4_+_83570980_83571006	0.0809023	SOX2.p2	CR457141|ENOPH1|58478|enolase-phosphatase 1
hg18_v1_chr6_-_25679197_25679277	0.0808353	SOX2.p2	
hg18_v1_chr9_-_14303509_14303718	0.0806594	SOX2.p2	BT007266|NFIB|4781|nuclear factor I/B	DQ891097|NFIB|4781|nuclear factor I/B	DQ894279|NFIB|4781|nuclear factor I/B	EU832141|NFIB|4781|nuclear factor I/B	EU832234|NFIB|4781|nuclear factor I/B	AK290603|NFIB|4781|nuclear factor I/B	BC001283|NFIB|4781|nuclear factor I/B	U85193|NFIB|4781|nuclear factor I/B
hg18_v1_chr6_+_135544170_135544207	0.0806067	SOX2.p2	BC064955|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)
hg18_v1_chrX_-_39921525_39921525	0.0804533	SOX2.p2	BC114220|BCOR|54880|BCL6 corepressor	NM_001123383|BCOR|54880|BCL6 corepressor	NM_001123384|BCOR|54880|BCL6 corepressor
hg18_v1_chr1_+_87567136_87567158	0.080329	SOX2.p2	AK292578|LMO4|8543|LIM domain only 4
hg18_v1_chr8_+_11697616_11697678	0.0801952	SOX2.p2	CR614222|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR618448|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR590560|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	AK296043|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	AK315993|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	AK311246|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	X69141|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	AK301617|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR617638|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR595860|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR601044|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR603264|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR604624|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR617288|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR621292|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR602204|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1
hg18_v1_chr4_+_78172966_78173092	0.0801759	SOX2.p2	AK124592|SEPT11|55752|septin 11
hg18_v1_chr3_+_180763380_180763427	0.0800902	SOX2.p2	AB060168|ACTL6A|86|actin-like 6A	NM_004301|ACTL6A|86|actin-like 6A	NM_177989|ACTL6A|86|actin-like 6A	NM_178042|ACTL6A|86|actin-like 6A	AK098691|ACTL6A|86|actin-like 6A	CR602120|ACTL6A|86|actin-like 6A	BC000949|ACTL6A|86|actin-like 6A	CR597700|ACTL6A|86|actin-like 6A	CR613774|ACTL6A|86|actin-like 6A	AL136608|ACTL6A|86|actin-like 6A	BC036371|ACTL6A|86|actin-like 6A
hg18_v1_chrX_+_48127911_48127911	0.0800236	SOX2.p2	BC005325|SSX4|6759|synovial sarcoma, X breakpoint 4	NM_001034832|SSX4B|548313|synovial sarcoma, X breakpoint 4B	NM_001040612|SSX4B|548313|synovial sarcoma, X breakpoint 4B	NM_005636|SSX4|6759|synovial sarcoma, X breakpoint 4	NM_175729|SSX4|6759|synovial sarcoma, X breakpoint 4
hg18_v1_chr19_-_47498300_47498701	0.0798898	SOX2.p2	CR407626|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)	D63391|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)	BC007863|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)	BC003016|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)	NM_002573|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)
hg18_v1_chr11_-_48330574_48330574	0.0798298	SOX2.p2	NM_001005513|OR4C45|403257|olfactory receptor, family 4, subfamily C, member 45
hg18_v1_chrX_-_1291526_1291642	0.0798168	SOX2.p2	AB052639|CRLF2|64109|cytokine receptor-like factor 2	AF338733|CRLF2|64109|cytokine receptor-like factor 2	AY775789|CRLF2|64109|cytokine receptor-like factor 2	NM_001012288|CRLF2|64109|cytokine receptor-like factor 2	AF142570|CRLF2|64109|cytokine receptor-like factor 2	NM_022148|CRLF2|64109|cytokine receptor-like factor 2	AK026800|CRLF2|64109|cytokine receptor-like factor 2	AK223303|CRLF2|64109|cytokine receptor-like factor 2
hg18_v1_chr3_-_47798423_47798599	0.0798038	SOX2.p2	AK302541|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
hg18_v1_chr7_+_116182676_116182699	0.0797187	SOX2.p2	
hg18_v1_chr14_+_19473606_19473606	0.0796893	SOX2.p2	BC151145|OR4K1|79544|olfactory receptor, family 4, subfamily K, member 1	NM_001004063|OR4K1|79544|olfactory receptor, family 4, subfamily K, member 1
hg18_v1_chr3_-_153541468_153541468	0.0795915	SOX2.p2	AY358260|TMEM14E|645843|transmembrane protein 14E	NM_001123228|TMEM14E|645843|transmembrane protein 14E
hg18_v1_chr17_-_45621571_45621615	0.0795369	SOX2.p2	J00112|COL1A1|1277|collagen, type I, alpha 1
hg18_v1_chr11_+_59027624_59027624	0.0794965	SOX2.p2	NM_001004706|OR4D11|219986|olfactory receptor, family 4, subfamily D, member 11
hg18_v1_chr9_+_136358134_136358139	0.0794059	SOX2.p2	BC063827|RXRA|6256|retinoid X receptor, alpha	NM_002957|RXRA|6256|retinoid X receptor, alpha
hg18_v1_chr5_-_176671437_176671544	0.0792025	SOX2.p2	DQ892734|MXD3|83463|MAX dimerization protein 3	DQ895981|MXD3|83463|MAX dimerization protein 3	DQ896213|MXD3|83463|MAX dimerization protein 3	BC041690|MXD3|83463|MAX dimerization protein 3	CR613684|MXD3|83463|MAX dimerization protein 3	BC000745|MXD3|83463|MAX dimerization protein 3	BC032586|MXD3|83463|MAX dimerization protein 3	AF114834|MXD3|83463|MAX dimerization protein 3	CR626344|MXD3|83463|MAX dimerization protein 3	AK222579|MXD3|83463|MAX dimerization protein 3	AK316468|MXD3|83463|MAX dimerization protein 3	AK057034|MXD3|83463|MAX dimerization protein 3	AK303397|MXD3|83463|MAX dimerization protein 3
hg18_v1_chr12_-_116983276_116983360	0.0792014	SOX2.p2	AK310892|WSB2|55884|WD repeat and SOCS box containing 2	BC015887|WSB2|55884|WD repeat and SOCS box containing 2	AK298513|WSB2|55884|WD repeat and SOCS box containing 2	AF229181|WSB2|55884|WD repeat and SOCS box containing 2	NM_018639|WSB2|55884|WD repeat and SOCS box containing 2
hg18_v1_chr13_-_93929719_93929936	0.0790353	SOX2.p2	AK293115|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	BC028311|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	DQ902581|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	S69231|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	L18967|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	AJ000503|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	D17547|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	NM_001129889|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	NM_001922|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)
hg18_v1_chr3_-_127810087_127810087	0.0788453	SOX2.p2	AB113648|TXNRD3IT1|645840|thioredoxin reductase 3 intronic transcript 1	NM_001039783|TXNRD3IT1|645840|thioredoxin reductase 3 intronic transcript 1
hg18_v1_chr17_-_53515563_53515669	0.0788149	SOX2.p2	
hg18_v1_chr1_+_12108542_12108664	0.0787049	SOX2.p2	D86042|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8	BC063482|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8	NM_152942|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8	BC073839|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8	BC141804|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8
hg18_v1_chr6_-_108385905_108385995	0.078508	SOX2.p2	AF100141|SEC63|11231|SEC63 homolog (S. cerevisiae)	BC001153|SEC63|11231|SEC63 homolog (S. cerevisiae)	AK074835|SEC63|11231|SEC63 homolog (S. cerevisiae)
hg18_v1_chr4_-_174687931_174687958	0.0785001	SOX2.p2	NM_021973|HAND2|9464|heart and neural crest derivatives expressed 2	AK122739|HAND2|9464|heart and neural crest derivatives expressed 2	FJ226608|HAND2|9464|heart and neural crest derivatives expressed 2
hg18_v1_chr8_+_1940282_1940348	0.0784766	SOX2.p2	AF009203|KBTBD11|9920|kelch repeat and BTB (POZ) domain containing 11
hg18_v1_chr3_+_197951203_197951242	0.0783356	SOX2.p2	AK291339|PAK2|5062|p21 protein (Cdc42/Rac)-activated kinase 2
hg18_v1_chr6_-_150099352_150099400	0.0782138	SOX2.p2	AK023349|NUP43|348995|nucleoporin 43kDa
hg18_v1_chr6_-_105957458_105957620	0.0782105	SOX2.p2	AB020018|PREP|5550|prolyl endopeptidase	AY660966|PREP|5550|prolyl endopeptidase	D21102|PREP|5550|prolyl endopeptidase	X74496|PREP|5550|prolyl endopeptidase	AB028867|PREP|5550|prolyl endopeptidase	DQ893427|PREP|5550|prolyl endopeptidase	DQ896742|PREP|5550|prolyl endopeptidase
hg18_v1_chr11_-_129689524_129689559	0.0781451	SOX2.p2	AF161548|ZBTB44|29068|zinc finger and BTB domain containing 44
hg18_v1_chr5_+_140160966_140160966	0.0780595	SOX2.p2	AF152311|PCDHA3|56145|protocadherin alpha 3	AF152481|PCDHA3|56145|protocadherin alpha 3	BC069064|PCDHA3|56145|protocadherin alpha 3	BC129807|PCDHA3|56145|protocadherin alpha 3	NM_018906|PCDHA3|56145|protocadherin alpha 3	NM_031497|PCDHA3|56145|protocadherin alpha 3
hg18_v1_chr5_+_61637701_61637759	0.0780562	SOX2.p2	NM_001098511|KIF2A|3796|kinesin heavy chain member 2A	NM_004520|KIF2A|3796|kinesin heavy chain member 2A
hg18_v1_chr2_+_170298700_170298767	0.0778951	SOX2.p2	BC010437|KLHL23|151230|kelch-like 23 (Drosophila)
hg18_v1_chr8_+_21980315_21980332	0.0778598	SOX2.p2	DQ892779|EPB49|2039|erythrocyte membrane protein band 4.9 (dematin)	DQ896026|EPB49|2039|erythrocyte membrane protein band 4.9 (dematin)	EU832675|EPB49|2039|erythrocyte membrane protein band 4.9 (dematin)	EU832755|EPB49|2039|erythrocyte membrane protein band 4.9 (dematin)	BT007396|EPB49|2039|erythrocyte membrane protein band 4.9 (dematin)
hg18_v1_chr11_+_129689536_129689628	0.0778177	SOX2.p2	AK091840|FLJ34521|646383|hypothetical protein LOC646383
hg18_v1_chr15_+_64781723_64781734	0.0776832	SOX2.p2	AF035528|SMAD6|4091|SMAD family member 6	NM_005585|SMAD6|4091|SMAD family member 6
hg18_v1_chr2_-_128138435_128138636	0.0776664	SOX2.p2	AF527767|LIMS2|55679|LIM and senescent cell antigen-like domains 2	AK094954|LIMS2|55679|LIM and senescent cell antigen-like domains 2	AF527764|LIMS2|55679|LIM and senescent cell antigen-like domains 2	NM_017980|LIMS2|55679|LIM and senescent cell antigen-like domains 2
hg18_v1_chr7_+_47661366_47661366	0.0775943	SOX2.p2	AK126096|C7orf65|401335|chromosome 7 open reading frame 65	NM_001123065|C7orf65|401335|chromosome 7 open reading frame 65
hg18_v1_chr8_+_11697706_11697750	0.0771794	SOX2.p2	CR592418|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR613379|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	L06105|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	BC029641|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	BC034440|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR602308|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR610548|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR626247|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	L06070|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	BT006704|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR457033|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	DQ890697|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	DQ893882|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1
hg18_v1_chrX_+_47999740_47999753	0.0771706	SOX2.p2	NM_005635|SSX1|6756|synovial sarcoma, X breakpoint 1	X86174|SSX1|6756|synovial sarcoma, X breakpoint 1	BC150487|SSX1|6756|synovial sarcoma, X breakpoint 1	BC001003|SSX1|6756|synovial sarcoma, X breakpoint 1	BC125151|SSX1|6756|synovial sarcoma, X breakpoint 1	BC133693|SSX1|6756|synovial sarcoma, X breakpoint 1	BC128611|SSX1|6756|synovial sarcoma, X breakpoint 1
hg18_v1_chr9_+_102244005_102244041	0.0770317	SOX2.p2	CR599657|C9orf30|91283|chromosome 9 open reading frame 30	CR601135|C9orf30|91283|chromosome 9 open reading frame 30	NM_001198812|C9orf3-TMEFF1|100526694|C9orf3-TMEFF1 readthrough	AY598327|C9orf30|91283|chromosome 9 open reading frame 30
hg18_v1_chr11_+_88550687_88550770	0.0769846	SOX2.p2	NM_000372|TYR|7299|tyrosinase (oculocutaneous albinism IA)	BC027179|TYR|7299|tyrosinase (oculocutaneous albinism IA)	M74314|TYR|7299|tyrosinase (oculocutaneous albinism IA)	Y00819|TYR|7299|tyrosinase (oculocutaneous albinism IA)	U01873|TYR|7299|tyrosinase (oculocutaneous albinism IA)	J03581|TYR|7299|tyrosinase (oculocutaneous albinism IA)
hg18_v1_chr11_-_75833337_75833395	0.0769622	SOX2.p2	
hg18_v1_chr4_-_145281237_145281353	0.0769235	SOX2.p2	AY950614|GYPA|2993|glycophorin A (MNS blood group)	DQ893046|GYPA|2993|glycophorin A (MNS blood group)	L07251|GYPA|2993|glycophorin A (MNS blood group)	L07253|GYPA|2993|glycophorin A (MNS blood group)	U00177|GYPA|2993|glycophorin A (MNS blood group)	U00178|GYPA|2993|glycophorin A (MNS blood group)	U00179|GYPA|2993|glycophorin A (MNS blood group)	X57023|GYPA|2993|glycophorin A (MNS blood group)	M12857|GYPA|2993|glycophorin A (MNS blood group)	M36281|GYPA|2993|glycophorin A (MNS blood group)	X51798|GYPA|2993|glycophorin A (MNS blood group)	BC013328|GYPA|2993|glycophorin A (MNS blood group)	EU338231|GYPA|2993|glycophorin A (MNS blood group)	EU338232|GYPA|2993|glycophorin A (MNS blood group)	EU338233|GYPA|2993|glycophorin A (MNS blood group)	EU338234|GYPA|2993|glycophorin A (MNS blood group)	CR619929|GYPA|2993|glycophorin A (MNS blood group)	L31860|GYPA|2993|glycophorin A (MNS blood group)	X08054|GYPA|2993|glycophorin A (MNS blood group)	BC005319|GYPA|2993|glycophorin A (MNS blood group)	AK290561|GYPA|2993|glycophorin A (MNS blood group)	NM_002099|GYPA|2993|glycophorin A (MNS blood group)
hg18_v1_chr5_+_139008139_139008197	0.0768598	SOX2.p2	BC024040|CXXC5|51523|CXXC finger protein 5	BC041013|CXXC5|51523|CXXC finger protein 5	BC050046|CXXC5|51523|CXXC finger protein 5	BC017439|CXXC5|51523|CXXC finger protein 5
hg18_v1_chr8_-_18710575_18710684	0.0768467	SOX2.p2	BC045112|PSD3|23362|pleckstrin and Sec7 domain containing 3	AB023159|PSD3|23362|pleckstrin and Sec7 domain containing 3	NM_206909|PSD3|23362|pleckstrin and Sec7 domain containing 3
hg18_v1_chr5_-_39430180_39430277	0.0767786	SOX2.p2	DQ891872|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)	EU176643|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)	AF188298|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)	U39050|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)
hg18_v1_chr1_+_100088394_100088632	0.0767023	SOX2.p2	BC078663|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	NM_000028|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	NM_000643|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	NM_000644|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	U84008|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	U84009|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	U84010|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase
hg18_v1_chr15_+_71953020_71953103	0.0766675	SOX2.p2	BC033516|TBC1D21|161514|TBC1 domain family, member 21	NM_153356|TBC1D21|161514|TBC1 domain family, member 21	AB449907|TBC1D21|161514|TBC1 domain family, member 21
hg18_v1_chr11_-_84311867_84311894	0.0765924	SOX2.p2	AK299797|DLG2|1740|discs, large homolog 2 (Drosophila)	BC143964|DLG2|1740|discs, large homolog 2 (Drosophila)
hg18_v1_chr7_+_56086933_56086955	0.0765518	SOX2.p2	L27706|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	BC106941|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	BC106942|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)
hg18_v1_chr1_+_43628186_43628226	0.076545	SOX2.p2	BC051343|C1orf84|149469|chromosome 1 open reading frame 84	AK091821|C1orf84|149469|chromosome 1 open reading frame 84
hg18_v1_chr2_+_88148413_88148516	0.0765226	SOX2.p2	BC126191|SMYD1|150572|SET and MYND domain containing 1	NM_198274|SMYD1|150572|SET and MYND domain containing 1	AK091724|SMYD1|150572|SET and MYND domain containing 1	BC017915|SMYD1|150572|SET and MYND domain containing 1	BX647878|SMYD1|150572|SET and MYND domain containing 1	AL832035|SMYD1|150572|SET and MYND domain containing 1	EU831908|SMYD1|150572|SET and MYND domain containing 1	EU832002|SMYD1|150572|SET and MYND domain containing 1	AY518933|SMYD1|150572|SET and MYND domain containing 1
hg18_v1_chr6_+_15354278_15354505	0.0764843	SOX2.p2	AK292861|JARID2|3720|jumonji, AT rich interactive domain 2	BC046246|JARID2|3720|jumonji, AT rich interactive domain 2	NM_004973|JARID2|3720|jumonji, AT rich interactive domain 2	U57592|JARID2|3720|jumonji, AT rich interactive domain 2
hg18_v1_chr20_+_56903595_56903646	0.0764201	SOX2.p2	AK093534|GNAS|2778|GNAS complex locus
hg18_v1_chr11_-_111255354_111255390	0.07638	SOX2.p2	AK302630|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)	NM_138378|FDXACB1|91893|ferredoxin-fold anticodon binding domain containing 1	AK311254|FDXACB1|91893|ferredoxin-fold anticodon binding domain containing 1
hg18_v1_chr15_-_72513053_72513111	0.0763567	SOX2.p2	NM_001146030|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)
hg18_v1_chr7_-_158304062_158304201	0.0762931	SOX2.p2	AK126214|ESYT2|57488|extended synaptotagmin-like protein 2
hg18_v1_chr7_-_97439500_97439561	0.0762486	SOX2.p2	BC015431|MGC72080|389538|MGC72080 pseudogene	BC042035|MGC72080|389538|MGC72080 pseudogene
hg18_v1_chr14_-_68424653_68424732	0.0762192	SOX2.p2	BX641076|ACTN1|87|actinin, alpha 1
hg18_v1_chr11_+_10786137_10786218	0.0761724	SOX2.p2	AK055888|LOC144017|144017|hypothetical protein LOC144017
hg18_v1_chr7_-_150555153_150555263	0.0761333	SOX2.p2	BC001661|ABCF2|10061|ATP-binding cassette, sub-family F (GCN20), member 2	AF261092|ABCF2|10061|ATP-binding cassette, sub-family F (GCN20), member 2	AF261091|ABCF2|10061|ATP-binding cassette, sub-family F (GCN20), member 2	NM_005692|ABCF2|10061|ATP-binding cassette, sub-family F (GCN20), member 2	NM_007189|ABCF2|10061|ATP-binding cassette, sub-family F (GCN20), member 2
hg18_v1_chr10_+_35524835_35524959	0.0760733	SOX2.p2	AK289379|CREM|1390|cAMP responsive element modulator	NM_182721|CREM|1390|cAMP responsive element modulator	NM_182722|CREM|1390|cAMP responsive element modulator	NM_182723|CREM|1390|cAMP responsive element modulator	NM_182724|CREM|1390|cAMP responsive element modulator	NM_182725|CREM|1390|cAMP responsive element modulator	AK291566|CREM|1390|cAMP responsive element modulator	CR614277|CREM|1390|cAMP responsive element modulator
hg18_v1_chr21_+_37496616_37496639	0.0759481	SOX2.p2	CR593065|TTC3|7267|tetratricopeptide repeat domain 3
hg18_v1_chr4_+_57468847_57468993	0.0758409	SOX2.p2	BC038985|REST|5978|RE1-silencing transcription factor	U13879|REST|5978|RE1-silencing transcription factor
hg18_v1_chr19_+_46286207_46286216	0.0758145	SOX2.p2	NM_000766|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13	AF209774|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13	AY513604|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13	AY513605|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13	AY513606|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13	AY513607|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13	AY513608|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13	AY513609|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13
hg18_v1_chr5_+_36912595_36912648	0.0755814	SOX2.p2	NM_015384|NIPBL|25836|Nipped-B homolog (Drosophila)	NM_133433|NIPBL|25836|Nipped-B homolog (Drosophila)	AJ627032|NIPBL|25836|Nipped-B homolog (Drosophila)	AJ640137|NIPBL|25836|Nipped-B homolog (Drosophila)
hg18_v1_chr5_+_61910318_61910473	0.07557	SOX2.p2	AK123022|LRRC70|100130733|leucine rich repeat containing 70	NM_181506|LRRC70|100130733|leucine rich repeat containing 70	AY358733|LRRC70|100130733|leucine rich repeat containing 70	BC110838|LRRC70|100130733|leucine rich repeat containing 70	AY280614|LRRC70|100130733|leucine rich repeat containing 70
hg18_v1_chr11_-_63292688_63292857	0.0755583	SOX2.p2	NM_001144936|C11orf95|65998|chromosome 11 open reading frame 95
hg18_v1_chr3_+_9748439_9748461	0.0754986	SOX2.p2	BC053851|BRPF1|7862|bromodomain and PHD finger containing, 1
hg18_v1_chr7_+_91762227_91762355	0.0754063	SOX2.p2	
hg18_v1_chr9_+_114289178_114289289	0.0753925	SOX2.p2	BC105048|KIAA1958|158405|KIAA1958	BC113515|KIAA1958|158405|KIAA1958	BC143372|KIAA1958|158405|KIAA1958	BC143424|KIAA1958|158405|KIAA1958
hg18_v1_chr7_+_77307382_77307508	0.0753432	SOX2.p2	BC022419|PHTF2|57157|putative homeodomain transcription factor 2	NM_001127357|PHTF2|57157|putative homeodomain transcription factor 2	NM_001127359|PHTF2|57157|putative homeodomain transcription factor 2	NM_020432|PHTF2|57157|putative homeodomain transcription factor 2	AL831969|PHTF2|57157|putative homeodomain transcription factor 2	BC127093|PHTF2|57157|putative homeodomain transcription factor 2	BC127094|PHTF2|57157|putative homeodomain transcription factor 2	AM392983|PHTF2|57157|putative homeodomain transcription factor 2	AM393200|PHTF2|57157|putative homeodomain transcription factor 2
hg18_v1_chr5_+_150137700_150137700	0.075293	SOX2.p2	AK125286|C5orf62|85027|chromosome 5 open reading frame 62	NM_032947|C5orf62|85027|chromosome 5 open reading frame 62
hg18_v1_chr15_+_80741876_80742015	0.075266	SOX2.p2	BC007811|LOC80154|80154|hypothetical LOC80154	BC065260|LOC80154|80154|hypothetical LOC80154	AK026448|LOC80154|80154|hypothetical LOC80154
hg18_v1_chr15_+_78520634_78520686	0.0751586	SOX2.p2	AK295763|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2
hg18_v1_chr1_+_198449278_198449278	0.0751256	SOX2.p2	NM_001105517|FAM58B|339521|family with sequence similarity 58, member B
hg18_v1_chr11_+_94398069_94398069	0.0749674	SOX2.p2	BC157851|KDM4DL|390245|lysine (K)-specific demethylase 4D-like	NM_001161630|KDM4DL|390245|lysine (K)-specific demethylase 4D-like
hg18_v1_chr6_-_105957651_105957651	0.0749443	SOX2.p2	BC030636|PREP|5550|prolyl endopeptidase
hg18_v1_chr11_-_10671736_10671750	0.0747189	SOX2.p2	AF081250|MRVI1|10335|murine retrovirus integration site 1 homolog	AK304702|MRVI1|10335|murine retrovirus integration site 1 homolog
hg18_v1_chr12_-_69289889_69289890	0.0746657	SOX2.p2	BC101679|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	BC113463|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	BC143356|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	BC143360|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	NM_002837|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	X54131|PTPRB|5787|protein tyrosine phosphatase, receptor type, B
hg18_v1_chr2_+_114935623_114935649	0.0745988	SOX2.p2	AK055256|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)	BC038514|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)	NM_001178036|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)
hg18_v1_chr1_+_209586328_209586328	0.0744734	SOX2.p2	BC029600|TRAF5|7188|TNF receptor-associated factor 5	NM_145759|TRAF5|7188|TNF receptor-associated factor 5
hg18_v1_chr4_+_120167770_120167775	0.0744708	SOX2.p2	AJ010482|SYNPO2|171024|synaptopodin 2
hg18_v1_chr14_+_76297885_76298532	0.0744568	SOX2.p2	NM_014909|VASH1|22846|vasohibin 1	AL832588|VASH1|22846|vasohibin 1	BC009031|VASH1|22846|vasohibin 1	AB028959|VASH1|22846|vasohibin 1
hg18_v1_chr1_-_244647333_244647336	0.0743895	SOX2.p2	AK024733|SMYD3|64754|SET and MYND domain containing 3	NM_022743|SMYD3|64754|SET and MYND domain containing 3
hg18_v1_chr2_-_85494664_85494690	0.0743319	SOX2.p2	CR607458|CAPG|822|capping protein (actin filament), gelsolin-like	AK309290|CAPG|822|capping protein (actin filament), gelsolin-like
hg18_v1_chr12_-_18134319_18134380	0.0742933	SOX2.p2	AK026308|RERGL|79785|RERG/RAS-like	CR618874|RERGL|79785|RERG/RAS-like	BC042888|RERGL|79785|RERG/RAS-like	NM_024730|RERGL|79785|RERG/RAS-like
hg18_v1_chr12_-_43556338_43556406	0.0740985	SOX2.p2	AK056082|NELL2|4753|NEL-like 2 (chicken)	AK297521|NELL2|4753|NEL-like 2 (chicken)	AK309825|NELL2|4753|NEL-like 2 (chicken)	D83018|NELL2|4753|NEL-like 2 (chicken)
hg18_v1_chr12_+_6751930_6752049	0.0740468	SOX2.p2	NM_002286|LAG3|3902|lymphocyte-activation gene 3	BC037962|LAG3|3902|lymphocyte-activation gene 3	BC052589|LAG3|3902|lymphocyte-activation gene 3	AK292104|LAG3|3902|lymphocyte-activation gene 3	X51985|LAG3|3902|lymphocyte-activation gene 3
hg18_v1_chr1_+_53698070_53698167	0.0740182	SOX2.p2	AK302085|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1	BC029566|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1
hg18_v1_chr1_-_12599934_12600406	0.0739433	SOX2.p2	DQ426869|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3	DQ893006|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3	DQ896252|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3	AF061741|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3	AK222593|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3	BC002730|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3	CR622920|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3	CR607120|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3	AK310202|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3	AY358093|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3	CR594468|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3	AK312961|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3	BX648476|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3	NM_004753|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3
hg18_v1_chr5_+_137701601_137701713	0.0739305	SOX2.p2	NM_016605|FAM53C|51307|family with sequence similarity 53, member C
hg18_v1_chr20_-_10602139_10602269	0.0738287	SOX2.p2	U77720|JAG1|182|jagged 1	AK312722|JAG1|182|jagged 1
hg18_v1_chr1_+_224317062_224317110	0.0738041	SOX2.p2	CR595231|LOC440926|440926|H3 histone, family 3A pseudogene	CR611775|LOC440926|440926|H3 histone, family 3A pseudogene	CR616667|LOC440926|440926|H3 histone, family 3A pseudogene	CR594323|LOC440926|440926|H3 histone, family 3A pseudogene	CR594694|H3F3A|3020|H3 histone, family 3A	CR604105|LOC440926|440926|H3 histone, family 3A pseudogene	CR613651|LOC440926|440926|H3 histone, family 3A pseudogene
hg18_v1_chr4_+_146250978_146251023	0.073802	SOX2.p2	X74987|ABCE1|6059|ATP-binding cassette, sub-family E (OABP), member 1
hg18_v1_chr19_-_52426055_52426316	0.0737404	SOX2.p2	U82987|BBC3|27113|BCL2 binding component 3	BC136481|BBC3|27113|BCL2 binding component 3	AF332558|BBC3|27113|BCL2 binding component 3	NM_014417|BBC3|27113|BCL2 binding component 3
hg18_v1_chr19_-_55046718_55046780	0.073626	SOX2.p2	BC043359|LOC100506033|100506033|hypothetical LOC100506033
hg18_v1_chr1_+_26389638_26389705	0.0735396	SOX2.p2	BC144663|CATSPER4|378807|cation channel, sperm associated 4	BC128138|CATSPER4|378807|cation channel, sperm associated 4	BC128139|CATSPER4|378807|cation channel, sperm associated 4	NM_198137|CATSPER4|378807|cation channel, sperm associated 4
hg18_v1_chr6_-_108386000_108386011	0.0735195	SOX2.p2	AJ011779|SEC63|11231|SEC63 homolog (S. cerevisiae)
hg18_v1_chr4_+_25931745_25931815	0.0734772	SOX2.p2	BC053568|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region	BC064976|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region
hg18_v1_chr1_-_74971679_74971679	0.0734751	SOX2.p2	NM_001130042|CRYZ|1429|crystallin, zeta (quinone reductase)	NM_001130043|CRYZ|1429|crystallin, zeta (quinone reductase)	NM_001134759|CRYZ|1429|crystallin, zeta (quinone reductase)	NM_001889|CRYZ|1429|crystallin, zeta (quinone reductase)
hg18_v1_chr9_+_6710862_6710862	0.0733814	SOX2.p2	AK310439|KDM4C|23081|lysine (K)-specific demethylase 4C	NM_001146696|KDM4C|23081|lysine (K)-specific demethylase 4C
hg18_v1_chr7_-_99537362_99537502	0.0732865	SOX2.p2	NM_005916|MCM7|4176|minichromosome maintenance complex component 7
hg18_v1_chr18_+_53862888_53862921	0.0732341	SOX2.p2	DQ890913|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	DQ893350|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	AY312514|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like
hg18_v1_chr3_+_184453907_184454037	0.0731567	SOX2.p2	AB209517|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
hg18_v1_chr5_+_78567604_78567690	0.0729804	SOX2.p2	NM_152405|JMY|133746|junction mediating and regulatory protein, p53 cofactor
hg18_v1_chr4_+_40953698_40953761	0.0729523	SOX2.p2	AK054579|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	AK315368|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR623179|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	BC006305|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR598723|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR609313|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR610620|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR614782|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR616949|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR623929|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR591761|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR619178|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR610215|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR613951|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR596405|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR598599|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR600224|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR624065|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	BC005117|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR626014|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR595667|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR609753|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	CR610993|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	DQ891998|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	DQ895188|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	X04741|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	AB209038|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)
hg18_v1_chrX_+_135407336_135407509	0.0729169	SOX2.p2	BC009896|HTATSF1|27336|HIV-1 Tat specific factor 1	NM_014500|HTATSF1|27336|HIV-1 Tat specific factor 1	AK299403|HTATSF1|27336|HIV-1 Tat specific factor 1	AK225870|HTATSF1|27336|HIV-1 Tat specific factor 1	U76992|HTATSF1|27336|HIV-1 Tat specific factor 1	EU176345|HTATSF1|27336|HIV-1 Tat specific factor 1	BT006886|HTATSF1|27336|HIV-1 Tat specific factor 1
hg18_v1_chr4_+_71986927_71987035	0.0728068	SOX2.p2	AK093545|MOBKL1A|92597|MOB1, Mps One Binder kinase activator-like 1A (yeast)	NM_173468|MOBKL1A|92597|MOB1, Mps One Binder kinase activator-like 1A (yeast)	AK299481|MOBKL1A|92597|MOB1, Mps One Binder kinase activator-like 1A (yeast)	BC038112|MOBKL1A|92597|MOB1, Mps One Binder kinase activator-like 1A (yeast)	AK313513|MOBKL1A|92597|MOB1, Mps One Binder kinase activator-like 1A (yeast)
hg18_v1_chrX_+_15435351_15435351	0.0727234	SOX2.p2	NM_001721|BMX|660|BMX non-receptor tyrosine kinase
hg18_v1_chr15_+_81907176_81907289	0.0725991	SOX2.p2	BC035598|SH3GL3|6457|SH3-domain GRB2-like 3	AF036269|SH3GL3|6457|SH3-domain GRB2-like 3	AF036270|SH3GL3|6457|SH3-domain GRB2-like 3	AF036271|SH3GL3|6457|SH3-domain GRB2-like 3	AF036272|SH3GL3|6457|SH3-domain GRB2-like 3	X99664|SH3GL3|6457|SH3-domain GRB2-like 3
hg18_v1_chr3_+_19963865_19963945	0.0725931	SOX2.p2	AK312618|RAB5A|5868|RAB5A, member RAS oncogene family	BC018288|RAB5A|5868|RAB5A, member RAS oncogene family	AK309287|RAB5A|5868|RAB5A, member RAS oncogene family	AK295992|RAB5A|5868|RAB5A, member RAS oncogene family	BC001267|RAB5A|5868|RAB5A, member RAS oncogene family
hg18_v1_chr3_-_48445719_48446049	0.0724157	SOX2.p2	AB007867|PLXNB1|5364|plexin B1	BC146793|PLXNB1|5364|plexin B1	NM_002673|PLXNB1|5364|plexin B1
hg18_v1_chr19_+_60803412_60803563	0.0723974	SOX2.p2	NM_153219|ZNF524|147807|zinc finger protein 524	BC067748|ZNF524|147807|zinc finger protein 524
hg18_v1_chr1_+_25629968_25630176	0.0723908	SOX2.p2	AK311472|TMEM57|55219|transmembrane protein 57	NM_018202|TMEM57|55219|transmembrane protein 57	AY845015|TMEM57|55219|transmembrane protein 57	BC007687|TMEM57|55219|transmembrane protein 57	AK001609|TMEM57|55219|transmembrane protein 57	AY845035|TMEM57|55219|transmembrane protein 57	AY845036|TMEM57|55219|transmembrane protein 57	BC032427|TMEM57|55219|transmembrane protein 57	BC020801|TMEM57|55219|transmembrane protein 57
hg18_v1_chr20_-_21326046_21326182	0.072153	SOX2.p2	NM_033176|NKX2-4|644524|NK2 homeobox 4
hg18_v1_chr2_-_152299229_152299246	0.0721507	SOX2.p2	AK096903|NEB|4703|nebulin	AK307607|NEB|4703|nebulin	BC029384|NEB|4703|nebulin	BC012533|NEB|4703|nebulin	BC056251|NEB|4703|nebulin	BC105590|NEB|4703|nebulin	NM_001164507|NEB|4703|nebulin	NM_001164508|NEB|4703|nebulin	NM_004543|NEB|4703|nebulin
hg18_v1_chr18_+_41558089_41558115	0.0721227	SOX2.p2	NM_001128588|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)	NM_001146036|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)	NM_015865|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)
hg18_v1_chr2_-_47235929_47236020	0.0720098	SOX2.p2	AK097491|C2orf61|285051|chromosome 2 open reading frame 61	NM_001163561|C2orf61|285051|chromosome 2 open reading frame 61	NM_173649|C2orf61|285051|chromosome 2 open reading frame 61
hg18_v1_chr6_+_28032997_28032997	0.0719658	SOX2.p2	BC109251|OR2B6|26212|olfactory receptor, family 2, subfamily B, member 6	BC110457|OR2B6|26212|olfactory receptor, family 2, subfamily B, member 6	NM_012367|OR2B6|26212|olfactory receptor, family 2, subfamily B, member 6
hg18_v1_chr2_+_100453375_100453375	0.0718954	SOX2.p2	AB164464|NMS|129521|neuromedin S	NM_001011717|NMS|129521|neuromedin S
hg18_v1_chr6_-_88468368_88468394	0.0718317	SOX2.p2	BC005051|AKIRIN2|55122|akirin 2
hg18_v1_chr22_+_42138034_42138088	0.0717929	SOX2.p2	AK289774|MPPED1|758|metallophosphoesterase domain containing 1
hg18_v1_chr1_-_200380321_200380473	0.0717761	SOX2.p2	AB118752|ARL8A|127829|ADP-ribosylation factor-like 8A	BC015408|ARL8A|127829|ADP-ribosylation factor-like 8A	AK127138|ARL8A|127829|ADP-ribosylation factor-like 8A	AK313122|ARL8A|127829|ADP-ribosylation factor-like 8A
hg18_v1_chr10_-_73784661_73784707	0.0717215	SOX2.p2	BC064920|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12	CR606618|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12	AK000034|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12	AK225051|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12
hg18_v1_chr5_+_161045235_161045235	0.0717171	SOX2.p2	NM_000811|GABRA6|2559|gamma-aminobutyric acid (GABA) A receptor, alpha 6
hg18_v1_chr1_-_241485105_241485285	0.0717091	SOX2.p2	AK310003|CEP170|9859|centrosomal protein 170kDa	BC050722|CEP170|9859|centrosomal protein 170kDa
hg18_v1_chr19_+_3523903_3523949	0.0716572	SOX2.p2	NM_006339|HMG20B|10362|high-mobility group 20B
hg18_v1_chr19_+_3523950_3523957	0.0716187	SOX2.p2	BC002552|HMG20B|10362|high-mobility group 20B	AK289500|HMG20B|10362|high-mobility group 20B	BC003505|HMG20B|10362|high-mobility group 20B
hg18_v1_chr12_+_63849606_63849637	0.0715899	SOX2.p2	AK312473|LEMD3|23592|LEM domain containing 3	NM_001167614|LEMD3|23592|LEM domain containing 3	NM_014319|LEMD3|23592|LEM domain containing 3	AK304317|LEMD3|23592|LEM domain containing 3	AF112299|LEMD3|23592|LEM domain containing 3
hg18_v1_chr3_-_48576204_48576225	0.0714511	SOX2.p2	BC002647|UCN2|90226|urocortin 2	BC022096|UCN2|90226|urocortin 2	NM_033199|UCN2|90226|urocortin 2
hg18_v1_chr1_-_156937065_156937109	0.0713636	SOX2.p2	NM_001005279|OR6K2|81448|olfactory receptor, family 6, subfamily K, member 2	BC137022|OR6K2|81448|olfactory receptor, family 6, subfamily K, member 2
hg18_v1_chr7_+_94130752_94130882	0.0713248	SOX2.p2	AB028974|PEG10|23089|paternally expressed 10	AF216076|PEG10|23089|paternally expressed 10
hg18_v1_chr5_-_168204430_168204444	0.071194	SOX2.p2	
hg18_v1_chr1_+_43628136_43628170	0.0711687	SOX2.p2	BC017576|C1orf84|149469|chromosome 1 open reading frame 84	NM_001012961|C1orf84|149469|chromosome 1 open reading frame 84
hg18_v1_chr1_-_188713324_188713393	0.0711413	SOX2.p2	AK123024|FAM5C|339479|family with sequence similarity 5, member C	AB111893|FAM5C|339479|family with sequence similarity 5, member C	NM_199051|FAM5C|339479|family with sequence similarity 5, member C
hg18_v1_chr6_-_128263868_128263918	0.070944	SOX2.p2	AK292046|THEMIS|387357|thymocyte selection associated	AK097903|THEMIS|387357|thymocyte selection associated	BC144034|THEMIS|387357|thymocyte selection associated	BC130516|THEMIS|387357|thymocyte selection associated	NM_001010923|THEMIS|387357|thymocyte selection associated	NM_001164685|THEMIS|387357|thymocyte selection associated
hg18_v1_chr8_+_17866373_17866408	0.0708896	SOX2.p2	AF068293|PCM1|5108|pericentriolar material 1
hg18_v1_chr22_+_29420792_29420898	0.0708491	SOX2.p2	AF323731|OSBP2|23762|oxysterol binding protein 2	NM_030758|OSBP2|23762|oxysterol binding protein 2	AK097581|OSBP2|23762|oxysterol binding protein 2	AK294007|OSBP2|23762|oxysterol binding protein 2	BC118914|OSBP2|23762|oxysterol binding protein 2	AB051451|OSBP2|23762|oxysterol binding protein 2	AF288741|OSBP2|23762|oxysterol binding protein 2
hg18_v1_chr5_+_67558217_67558217	0.0707451	SOX2.p2	M61906|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	NM_181523|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
hg18_v1_chr22_-_15453440_15453699	0.070712	SOX2.p2	BC139842|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2	BC139926|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2	DQ892082|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2	DQ895275|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2	GQ129410|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2	GQ129411|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2	CR456508|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2	BC100811|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2	BC100812|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2	BC100813|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2	BC022006|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2	BC033797|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2	NM_014406|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2
hg18_v1_chr7_-_115458064_115458112	0.0705907	SOX2.p2	CR933605|TFEC|22797|transcription factor EC
hg18_v1_chr10_+_70172257_70172311	0.0705819	SOX2.p2	AK000741|CCAR1|55749|cell division cycle and apoptosis regulator 1
hg18_v1_chr6_+_16251260_16251318	0.0705766	SOX2.p2	AK026739|MYLIP|29116|myosin regulatory light chain interacting protein
hg18_v1_chr17_-_44026321_44026411	0.0704703	SOX2.p2	M92299|HOXB5|3215|homeobox B5
hg18_v1_chrX_+_55951280_55951389	0.070376	SOX2.p2	
hg18_v1_chr1_-_20985734_20985745	0.0703195	SOX2.p2	AK291252|HP1BP3|50809|heterochromatin protein 1, binding protein 3
hg18_v1_chr1_+_211190631_211190661	0.070145	SOX2.p2	AK302675|VASH2|79805|vasohibin 2
hg18_v1_chr11_+_65027721_65028452	0.0701409	SOX2.p2	
hg18_v1_chr9_+_102380156_102380264	0.0699975	SOX2.p2	NM_001018116|MURC|347273|muscle-related coiled-coil protein	AK300099|MURC|347273|muscle-related coiled-coil protein	EU487253|MURC|347273|muscle-related coiled-coil protein	BC090888|MURC|347273|muscle-related coiled-coil protein
hg18_v1_chr5_+_61637822_61637857	0.0699329	SOX2.p2	BC047544|KIF2A|3796|kinesin heavy chain member 2A
hg18_v1_chr18_+_53862744_53862821	0.0699234	SOX2.p2	AB071179|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like
hg18_v1_chr13_-_45654292_45654295	0.0698989	SOX2.p2	J02923|LCP1|3936|lymphocyte cytosolic protein 1 (L-plastin)
hg18_v1_chr15_-_47125788_47126069	0.0698515	SOX2.p2	D87445|SECISBP2L|9728|SECIS binding protein 2-like	AK307480|SECISBP2L|9728|SECIS binding protein 2-like	AK308183|SECISBP2L|9728|SECIS binding protein 2-like	BC008635|SECISBP2L|9728|SECIS binding protein 2-like	BC033001|SECISBP2L|9728|SECIS binding protein 2-like	NM_001193489|SECISBP2L|9728|SECIS binding protein 2-like	NM_014701|SECISBP2L|9728|SECIS binding protein 2-like
hg18_v1_chr9_-_126945536_126945689	0.0697093	SOX2.p2	BC104030|SCAI|286205|suppressor of cancer cell invasion	BC104031|SCAI|286205|suppressor of cancer cell invasion	BC104032|SCAI|286205|suppressor of cancer cell invasion	AK098024|SCAI|286205|suppressor of cancer cell invasion	AK093983|SCAI|286205|suppressor of cancer cell invasion	NM_001144877|SCAI|286205|suppressor of cancer cell invasion	NM_173690|SCAI|286205|suppressor of cancer cell invasion
hg18_v1_chr2_+_198377561_198377670	0.0696238	SOX2.p2	AK127514|PLCL1|5334|phospholipase C-like 1	NM_006226|PLCL1|5334|phospholipase C-like 1
hg18_v1_chr2_-_215953818_215953973	0.0694474	SOX2.p2	U60067|FN1|2335|fibronectin 1	U60068|FN1|2335|fibronectin 1
hg18_v1_chr5_+_55098469_55098495	0.0693595	SOX2.p2	NM_001166534|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	AK093439|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4
hg18_v1_chr1_-_222688337_222688430	0.06933	SOX2.p2	AK307909|WDR26|80232|WD repeat domain 26	BC034498|WDR26|80232|WD repeat domain 26
hg18_v1_chr1_-_114855200_114855266	0.0693091	SOX2.p2	AB029036|TRIM33|51592|tripartite motif containing 33
hg18_v1_chr4_-_103485600_103485715	0.0691714	SOX2.p2	AF193052|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8	BC012125|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8	NM_001135146|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8
hg18_v1_chr7_-_37454933_37455054	0.0690957	SOX2.p2	AL136787|ELMO1|9844|engulfment and cell motility 1	AK001084|ELMO1|9844|engulfment and cell motility 1	NM_014800|ELMO1|9844|engulfment and cell motility 1	AK314349|ELMO1|9844|engulfment and cell motility 1
hg18_v1_chr15_+_47502666_47502771	0.0690217	SOX2.p2	NM_002009|FGF7|2252|fibroblast growth factor 7	BC010956|FGF7|2252|fibroblast growth factor 7	AK313160|FGF7|2252|fibroblast growth factor 7	M60828|FGF7|2252|fibroblast growth factor 7	S81661|FGF7|2252|fibroblast growth factor 7	CR617541|FGF7|2252|fibroblast growth factor 7	CR609737|FGF7|2252|fibroblast growth factor 7
hg18_v1_chr11_+_5862076_5862098	0.069015	SOX2.p2	BC136972|OR52E4|390081|olfactory receptor, family 52, subfamily E, member 4	BC136974|OR52E4|390081|olfactory receptor, family 52, subfamily E, member 4	NM_001005165|OR52E4|390081|olfactory receptor, family 52, subfamily E, member 4
hg18_v1_chrX_+_135406903_135407064	0.0689893	SOX2.p2	AB209303|HTATSF1|27336|HIV-1 Tat specific factor 1	NM_001163280|HTATSF1|27336|HIV-1 Tat specific factor 1
hg18_v1_chr16_+_83349816_83349878	0.0688054	SOX2.p2	CR626589|USP10|9100|ubiquitin specific peptidase 10
hg18_v1_chrX_+_128501862_128502097	0.0687242	SOX2.p2	AK226116|OCRL|4952|oculocerebrorenal syndrome of Lowe	BC094726|OCRL|4952|oculocerebrorenal syndrome of Lowe	NM_000276|OCRL|4952|oculocerebrorenal syndrome of Lowe	NM_001587|OCRL|4952|oculocerebrorenal syndrome of Lowe	U57627|OCRL|4952|oculocerebrorenal syndrome of Lowe	AK293107|OCRL|4952|oculocerebrorenal syndrome of Lowe	BC130612|OCRL|4952|oculocerebrorenal syndrome of Lowe	BC144106|OCRL|4952|oculocerebrorenal syndrome of Lowe	BC025253|OCRL|4952|oculocerebrorenal syndrome of Lowe
hg18_v1_chr17_+_40655060_40655226	0.0686682	SOX2.p2	AY278319|FMNL1|752|formin-like 1	NM_005892|FMNL1|752|formin-like 1	BC111564|FMNL1|752|formin-like 1
hg18_v1_chr5_+_65258139_65258193	0.0686182	SOX2.p2	AF263744|ERBB2IP|55914|erbb2 interacting protein	NM_001006600|ERBB2IP|55914|erbb2 interacting protein	NM_018695|ERBB2IP|55914|erbb2 interacting protein	AK295708|ERBB2IP|55914|erbb2 interacting protein	AK304693|ERBB2IP|55914|erbb2 interacting protein
hg18_v1_chr14_+_51525942_51526067	0.0686159	SOX2.p2	AF087877|C14orf166|51637|chromosome 14 open reading frame 166	AF100755|C14orf166|51637|chromosome 14 open reading frame 166	AF151857|C14orf166|51637|chromosome 14 open reading frame 166	DQ525179|C14orf166|51637|chromosome 14 open reading frame 166	NM_016039|C14orf166|51637|chromosome 14 open reading frame 166	AK312004|C14orf166|51637|chromosome 14 open reading frame 166	CR606480|C14orf166|51637|chromosome 14 open reading frame 166	CR599997|C14orf166|51637|chromosome 14 open reading frame 166	BC001722|C14orf166|51637|chromosome 14 open reading frame 166	CR606481|C14orf166|51637|chromosome 14 open reading frame 166	CR611728|C14orf166|51637|chromosome 14 open reading frame 166
hg18_v1_chr10_+_86174665_86174686	0.0686017	SOX2.p2	AK294321|FAM190B|54462|family with sequence similarity 190, member B
hg18_v1_chr3_-_47798341_47798346	0.0685342	SOX2.p2	BC021862|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
hg18_v1_chrX_+_99726445_99726670	0.0685248	SOX2.p2	NM_022144|TNMD|64102|tenomodulin	AF191770|TNMD|64102|tenomodulin	BC034030|TNMD|64102|tenomodulin	AF291656|TNMD|64102|tenomodulin	AF234259|TNMD|64102|tenomodulin	AY358706|TNMD|64102|tenomodulin	AB055421|TNMD|64102|tenomodulin
hg18_v1_chr6_-_71069347_71069571	0.0685185	SOX2.p2	X54412|COL9A1|1297|collagen, type IX, alpha 1	BC015409|COL9A1|1297|collagen, type IX, alpha 1	NM_001851|COL9A1|1297|collagen, type IX, alpha 1
hg18_v1_chr19_-_56585603_56585672	0.0685137	SOX2.p2	BC085012|LOC147646|147646|hypothetical protein LOC147646	BC043532|LOC147646|147646|hypothetical protein LOC147646	NM_001193623|LOC147646|147646|hypothetical protein LOC147646
hg18_v1_chr8_-_74821636_74821789	0.0685088	SOX2.p2	AK294466|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	CR627442|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	NM_001164380|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	NM_001164381|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	NM_001164382|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	NM_001164383|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	NM_001164385|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	NM_014393|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)
hg18_v1_chrX_-_142432884_142432972	0.0684346	SOX2.p2	DQ336128|SPANXN3|139067|SPANX family, member N3	DQ336129|SPANXN3|139067|SPANX family, member N3	BC062750|SPANXN3|139067|SPANX family, member N3	NM_001009609|SPANXN3|139067|SPANX family, member N3
hg18_v1_chr12_+_67919583_67919618	0.0683963	SOX2.p2	NM_007007|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	AK223568|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	AK299928|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa
hg18_v1_chr1_+_243065215_243065449	0.0682946	SOX2.p2	AK125259|FAM36A|116228|family with sequence similarity 36, member A	NM_198076|FAM36A|116228|family with sequence similarity 36, member A	CR592197|FAM36A|116228|family with sequence similarity 36, member A
hg18_v1_chr21_-_26029830_26029854	0.0682671	SOX2.p2	NM_001003696|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6	NM_001003697|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6	NM_001003701|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6	NM_001003703|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6	NM_001685|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6	BC001178|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6
hg18_v1_chr6_-_30763650_30763650	0.0682468	SOX2.p2	AK124880|KIAA1949|170954|KIAA1949	NM_133471|KIAA1949|170954|KIAA1949
hg18_v1_chr4_+_40953652_40953654	0.0682346	SOX2.p2	NM_004181|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)
hg18_v1_chr8_-_102029997_102030305	0.0682039	SOX2.p2	CR611466|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide	S79449|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide	DQ891706|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide	DQ894884|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide	CR625952|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide
hg18_v1_chr20_+_23293020_23293020	0.0681807	SOX2.p2	AB100265|GZF1|64412|GDNF-inducible zinc finger protein 1	BC125188|GZF1|64412|GDNF-inducible zinc finger protein 1	BC154409|GZF1|64412|GDNF-inducible zinc finger protein 1	NM_022482|GZF1|64412|GDNF-inducible zinc finger protein 1
hg18_v1_chr9_-_94206648_94206801	0.0680624	SOX2.p2	AF086912|OGN|4969|osteoglycin	AF100758|OGN|4969|osteoglycin	CR614070|OGN|4969|osteoglycin	NM_014057|OGN|4969|osteoglycin	NM_033014|OGN|4969|osteoglycin	AK289628|OGN|4969|osteoglycin	AK295433|OGN|4969|osteoglycin
hg18_v1_chr1_-_20985747_20985771	0.0678884	SOX2.p2	AK023129|HP1BP3|50809|heterochromatin protein 1, binding protein 3	NM_016287|HP1BP3|50809|heterochromatin protein 1, binding protein 3
hg18_v1_chr2_+_28892366_28892384	0.0676893	SOX2.p2	NM_001008779|SPDYA|245711|speedy homolog A (Xenopus laevis)	AY820303|SPDYA|245711|speedy homolog A (Xenopus laevis)	AY820304|SPDYA|245711|speedy homolog A (Xenopus laevis)
hg18_v1_chr16_-_3870121_3870121	0.0676383	SOX2.p2	AB210043|CREBBP|1387|CREB binding protein	NM_001079846|CREBBP|1387|CREB binding protein	NM_004380|CREBBP|1387|CREB binding protein
hg18_v1_chr3_-_188339882_188340018	0.0675737	SOX2.p2	L05096|RPL39L|116832|ribosomal protein L39-like	AB063610|RPL39L|116832|ribosomal protein L39-like	BC012328|RPL39L|116832|ribosomal protein L39-like	NM_052969|RPL39L|116832|ribosomal protein L39-like	CR603001|RPL39L|116832|ribosomal protein L39-like
hg18_v1_chrX_-_55225668_55225668	0.0674753	SOX2.p2	NM_001190708|MTRNR2L10|100463488|MT-RNR2-like 10
hg18_v1_chr3_+_171112053_171112175	0.0673966	SOX2.p2	BX648991|SAMD7|344658|sterile alpha motif domain containing 7	BX648534|SAMD7|344658|sterile alpha motif domain containing 7	BX648989|SAMD7|344658|sterile alpha motif domain containing 7	BX537903|SAMD7|344658|sterile alpha motif domain containing 7	NM_182610|SAMD7|344658|sterile alpha motif domain containing 7
hg18_v1_chr1_+_190394214_190394390	0.0673945	SOX2.p2	NM_130782|RGS18|64407|regulator of G-protein signaling 18	AK292015|RGS18|64407|regulator of G-protein signaling 18	BC020632|RGS18|64407|regulator of G-protein signaling 18	AK057114|RGS18|64407|regulator of G-protein signaling 18	AK315377|RGS18|64407|regulator of G-protein signaling 18	AF268036|RGS18|64407|regulator of G-protein signaling 18	AF076642|RGS18|64407|regulator of G-protein signaling 18	CR602825|RGS18|64407|regulator of G-protein signaling 18	DQ891393|RGS18|64407|regulator of G-protein signaling 18	DQ894569|RGS18|64407|regulator of G-protein signaling 18
hg18_v1_chr6_+_108987703_108987742	0.0673227	SOX2.p2	NM_201559|FOXO3|2309|forkhead box O3	BC020227|FOXO3|2309|forkhead box O3	BC021224|FOXO3|2309|forkhead box O3	CR623727|FOXO3|2309|forkhead box O3
hg18_v1_chr1_-_175400441_175400456	0.0673197	SOX2.p2	BC142697|ASTN1|460|astrotactin 1	AB006627|ASTN1|460|astrotactin 1	BC146795|ASTN1|460|astrotactin 1
hg18_v1_chr16_+_4842077_4842216	0.067258	SOX2.p2	NM_016936|UBN1|29855|ubinuclein 1	AF108461|UBN1|29855|ubinuclein 1
hg18_v1_chr13_-_35842289_35842316	0.067206	SOX2.p2	AK057764|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)	NM_001142294|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)
hg18_v1_chr6_+_12622286_12622290	0.0672048	SOX2.p2	
hg18_v1_chr11_-_10671608_10671704	0.0670429	SOX2.p2	AK301296|MRVI1|10335|murine retrovirus integration site 1 homolog	AK127209|MRVI1|10335|murine retrovirus integration site 1 homolog	NM_001100167|MRVI1|10335|murine retrovirus integration site 1 homolog	BC117127|MRVI1|10335|murine retrovirus integration site 1 homolog
hg18_v1_chr12_-_7487989_7488019	0.0670264	SOX2.p2	GQ397482|CD163L1|283316|CD163 molecule-like 1	AK303372|CD163L1|283316|CD163 molecule-like 1	AF264014|CD163L1|283316|CD163 molecule-like 1	NM_174941|CD163L1|283316|CD163 molecule-like 1	BC104962|CD163L1|283316|CD163 molecule-like 1	BC104964|CD163L1|283316|CD163 molecule-like 1
hg18_v1_chr17_-_36725470_36725472	0.0670236	SOX2.p2	BC069078|KRTAP17-1|83902|keratin associated protein 17-1	AJ406952|KRTAP17-1|83902|keratin associated protein 17-1	BC069297|KRTAP17-1|83902|keratin associated protein 17-1	NM_031964|KRTAP17-1|83902|keratin associated protein 17-1
hg18_v1_chr1_-_70443748_70443849	0.0669888	SOX2.p2	BC003407|LRRC40|55631|leucine rich repeat containing 40	BC008586|LRRC40|55631|leucine rich repeat containing 40
hg18_v1_chr3_+_38238080_38238094	0.0667593	SOX2.p2	AF087893|OXSR1|9943|oxidative-stress responsive 1
hg18_v1_chr17_+_65582981_65583070	0.0666862	SOX2.p2	BC030961|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	AF153815|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	AF153816|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	NM_018658|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	NM_170741|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	AK225944|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	AK290799|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16
hg18_v1_chr9_+_136358145_136358298	0.0666573	SOX2.p2	BC110998|RXRA|6256|retinoid X receptor, alpha	X52773|RXRA|6256|retinoid X receptor, alpha	EU446653|RXRA|6256|retinoid X receptor, alpha	AB307705|RXRA|6256|retinoid X receptor, alpha
hg18_v1_chr7_-_135263737_135263901	0.0666537	SOX2.p2	AF130088|LUZP6|767558|leucine zipper protein 6	CR625657|MTPN|136319|myotrophin	CR611568|MTPN|136319|myotrophin	CR599361|MTPN|136319|myotrophin
hg18_v1_chr11_-_125730622_125730642	0.0665552	SOX2.p2	
hg18_v1_chr21_-_32026276_32026338	0.0664957	SOX2.p2	BC014921|SCAF4|57466|SR-related CTD-associated factor 4	NM_001145444|SCAF4|57466|SR-related CTD-associated factor 4	NM_001145445|SCAF4|57466|SR-related CTD-associated factor 4	NM_020706|SCAF4|57466|SR-related CTD-associated factor 4
hg18_v1_chr1_-_43196911_43197107	0.0664927	SOX2.p2	BC118590|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1	BC121804|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1	K03195|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1
hg18_v1_chr17_+_73511843_73511912	0.0663915	SOX2.p2	BC039479|TNRC6C|57690|trinucleotide repeat containing 6C	NM_001142640|TNRC6C|57690|trinucleotide repeat containing 6C	NM_018996|TNRC6C|57690|trinucleotide repeat containing 6C
hg18_v1_chr3_+_194793615_194793683	0.0662341	SOX2.p2	NM_015560|OPA1|4976|optic atrophy 1 (autosomal dominant)	NM_130831|OPA1|4976|optic atrophy 1 (autosomal dominant)	NM_130832|OPA1|4976|optic atrophy 1 (autosomal dominant)	NM_130833|OPA1|4976|optic atrophy 1 (autosomal dominant)	NM_130834|OPA1|4976|optic atrophy 1 (autosomal dominant)	NM_130835|OPA1|4976|optic atrophy 1 (autosomal dominant)	NM_130836|OPA1|4976|optic atrophy 1 (autosomal dominant)	NM_130837|OPA1|4976|optic atrophy 1 (autosomal dominant)
hg18_v1_chr1_-_174442736_174442840	0.0662063	SOX2.p2	AF508940|RFWD2|64326|ring finger and WD repeat domain 2	AY509921|RFWD2|64326|ring finger and WD repeat domain 2
hg18_v1_chr1_-_43628035_43628041	0.0661906	SOX2.p2	BC010019|MED8|112950|mediator complex subunit 8
hg18_v1_chr11_-_56951132_56951159	0.0661818	SOX2.p2	BC003163|SLC43A3|29015|solute carrier family 43, member 3
hg18_v1_chr15_+_94670160_94670170	0.0661189	SOX2.p2	BC106083|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	NM_001145155|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	FM208183|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2
hg18_v1_chr3_+_180763432_180763439	0.0660523	SOX2.p2	AF041474|ACTL6A|86|actin-like 6A	CR594699|ACTL6A|86|actin-like 6A
hg18_v1_chr5_-_134762695_134762732	0.0659991	SOX2.p2	AF041483|H2AFY|9555|H2A histone family, member Y
hg18_v1_chr1_-_222688623_222688623	0.0659632	SOX2.p2	AB209887|WDR26|80232|WD repeat domain 26	NM_001115113|WDR26|80232|WD repeat domain 26	NM_025160|WDR26|80232|WD repeat domain 26
hg18_v1_chr5_-_150306298_150306335	0.0659284	SOX2.p2	BC117490|ZNF300P1|134466|zinc finger protein 300 pseudogene 1	BC126474|ZNF300P1|134466|zinc finger protein 300 pseudogene 1	AK091436|ZNF300P1|134466|zinc finger protein 300 pseudogene 1	AK096536|ZNF300P1|134466|zinc finger protein 300 pseudogene 1	BC022559|ZNF300P1|134466|zinc finger protein 300 pseudogene 1
hg18_v1_chr21_-_45118026_45118036	0.0658824	SOX2.p2	BC012858|PTTG1IP|754|pituitary tumor-transforming 1 interacting protein	AK298557|PTTG1IP|754|pituitary tumor-transforming 1 interacting protein
hg18_v1_chr1_+_357502_357521	0.0658631	SOX2.p2	BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3	BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3	NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29	NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3	NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16
hg18_v1_chr3_+_19963534_19963853	0.065812	SOX2.p2	NM_004162|RAB5A|5868|RAB5A, member RAS oncogene family
hg18_v1_chr12_+_74071145_74071160	0.0657912	SOX2.p2	BX640916|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2	BC029557|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2	NM_152436|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2	DQ891533|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2	DQ894722|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2
hg18_v1_chr11_+_55319607_55319607	0.0656793	SOX2.p2	NM_001004735|OR5D14|219436|olfactory receptor, family 5, subfamily D, member 14
hg18_v1_chr11_+_55842358_55842358	0.0656683	SOX2.p2	NM_001005202|OR8K3|219473|olfactory receptor, family 8, subfamily K, member 3
hg18_v1_chr6_+_34964999_34965157	0.0656582	SOX2.p2	BC022396|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A	NM_015245|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A	D86982|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A	BC031934|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A	AK298987|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A	BC132832|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A	BC144341|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A
hg18_v1_chr21_-_31123797_31123921	0.0654952	SOX2.p2	AJ457063|KRTAP7-1|337878|keratin associated protein 7-1 (gene/pseudogene)	AB096962|KRTAP7-1|337878|keratin associated protein 7-1 (gene/pseudogene)	NM_181606|KRTAP7-1|337878|keratin associated protein 7-1 (gene/pseudogene)
hg18_v1_chr1_+_11674365_11674416	0.0654354	SOX2.p2	BC111064|C1orf187|374946|chromosome 1 open reading frame 187	NM_198545|C1orf187|374946|chromosome 1 open reading frame 187	AK075558|C1orf187|374946|chromosome 1 open reading frame 187	AY358750|C1orf187|374946|chromosome 1 open reading frame 187
hg18_v1_chr3_-_38967055_38967055	0.0654141	SOX2.p2	AF109737|SCN11A|11280|sodium channel, voltage-gated, type XI, alpha subunit	AF150882|SCN11A|11280|sodium channel, voltage-gated, type XI, alpha subunit	NM_014139|SCN11A|11280|sodium channel, voltage-gated, type XI, alpha subunit
hg18_v1_chr8_-_18585721_18585904	0.0653926	SOX2.p2	EU832144|PSD3|23362|pleckstrin and Sec7 domain containing 3	EU832237|PSD3|23362|pleckstrin and Sec7 domain containing 3	AK296546|PSD3|23362|pleckstrin and Sec7 domain containing 3	BX647320|PSD3|23362|pleckstrin and Sec7 domain containing 3	BX647406|PSD3|23362|pleckstrin and Sec7 domain containing 3
hg18_v1_chr1_+_161305188_161305387	0.065375	SOX2.p2	DQ346664|RGS4|5999|regulator of G-protein signaling 4	AK295540|RGS4|5999|regulator of G-protein signaling 4	NM_005613|RGS4|5999|regulator of G-protein signaling 4
hg18_v1_chr8_+_110415725_110415813	0.0653475	SOX2.p2	NM_001193557|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	NM_020189|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	AK095651|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	AK316560|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	AK000487|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	AK290752|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	BC051878|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	BC007870|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)
hg18_v1_chr19_-_14121728_14121872	0.0651342	SOX2.p2	BC013275|LPHN1|22859|latrophilin 1	BC072445|LPHN1|22859|latrophilin 1	AK022001|LPHN1|22859|latrophilin 1	BC090949|LPHN1|22859|latrophilin 1
hg18_v1_chr8_-_110411283_110411338	0.0650098	SOX2.p2	AF283302|NUDCD1|84955|NudC domain containing 1	AK311583|NUDCD1|84955|NudC domain containing 1	AF521133|NUDCD1|84955|NudC domain containing 1	NM_001128211|NUDCD1|84955|NudC domain containing 1	AK307663|NUDCD1|84955|NudC domain containing 1
hg18_v1_chr7_-_139825802_139825837	0.0648834	SOX2.p2	NM_001145125|MKRN1|23608|makorin ring finger protein 1	NM_013446|MKRN1|23608|makorin ring finger protein 1
hg18_v1_chr14_-_57030227_57030328	0.064681	SOX2.p2	BC117405|C14orf105|55195|chromosome 14 open reading frame 105	BC143565|C14orf105|55195|chromosome 14 open reading frame 105	BC143566|C14orf105|55195|chromosome 14 open reading frame 105	BC143567|C14orf105|55195|chromosome 14 open reading frame 105	BC143568|C14orf105|55195|chromosome 14 open reading frame 105	AK307238|C14orf105|55195|chromosome 14 open reading frame 105	AK223127|C14orf105|55195|chromosome 14 open reading frame 105	AK001512|C14orf105|55195|chromosome 14 open reading frame 105	BC028060|C14orf105|55195|chromosome 14 open reading frame 105	NM_018168|C14orf105|55195|chromosome 14 open reading frame 105
hg18_v1_chr1_-_16033866_16033977	0.0646723	SOX2.p2	
hg18_v1_chr11_-_129322510_129322726	0.0646085	SOX2.p2	AB033057|PRDM10|56980|PR domain containing 10	BC117415|PRDM10|56980|PR domain containing 10	BC143612|PRDM10|56980|PR domain containing 10	BC143613|PRDM10|56980|PR domain containing 10	AF503171|PRDM10|56980|PR domain containing 10	AF275817|PRDM10|56980|PR domain containing 10	NM_199438|PRDM10|56980|PR domain containing 10	NM_199439|PRDM10|56980|PR domain containing 10
hg18_v1_chr3_-_195835298_195835497	0.0643997	SOX2.p2	BC014883|TMEM44|93109|transmembrane protein 44	BC130297|TMEM44|93109|transmembrane protein 44	BC144158|TMEM44|93109|transmembrane protein 44	BC144159|TMEM44|93109|transmembrane protein 44	BC111485|TMEM44|93109|transmembrane protein 44	NM_001011655|TMEM44|93109|transmembrane protein 44	NM_001166305|TMEM44|93109|transmembrane protein 44	NM_001166306|TMEM44|93109|transmembrane protein 44	NM_138399|TMEM44|93109|transmembrane protein 44
hg18_v1_chr11_+_36354110_36354163	0.0643549	SOX2.p2	NM_001160168|PRR5L|79899|proline rich 5 like	NM_024841|PRR5L|79899|proline rich 5 like	BX640959|PRR5L|79899|proline rich 5 like	AK024275|PRR5L|79899|proline rich 5 like
hg18_v1_chr3_-_170347019_170347093	0.0643462	SOX2.p2	AK292865|MECOM|2122|MDS1 and EVI1 complex locus	AF487422|MECOM|2122|MDS1 and EVI1 complex locus	NM_001105078|MECOM|2122|MDS1 and EVI1 complex locus
hg18_v1_chr1_-_199742841_199742863	0.0643442	SOX2.p2	CR619913|CSRP1|1465|cysteine and glycine-rich protein 1	BC007492|CSRP1|1465|cysteine and glycine-rich protein 1	CR593715|CSRP1|1465|cysteine and glycine-rich protein 1	CR603852|CSRP1|1465|cysteine and glycine-rich protein 1	CR613321|CSRP1|1465|cysteine and glycine-rich protein 1	CR601068|CSRP1|1465|cysteine and glycine-rich protein 1	CR615193|CSRP1|1465|cysteine and glycine-rich protein 1	CR621634|CSRP1|1465|cysteine and glycine-rich protein 1	CR625414|CSRP1|1465|cysteine and glycine-rich protein 1	M33146|CSRP1|1465|cysteine and glycine-rich protein 1	CR593927|CSRP1|1465|cysteine and glycine-rich protein 1	CR606741|CSRP1|1465|cysteine and glycine-rich protein 1	BC032493|CSRP1|1465|cysteine and glycine-rich protein 1	CR595754|CSRP1|1465|cysteine and glycine-rich protein 1	CR610287|CSRP1|1465|cysteine and glycine-rich protein 1	CR623326|CSRP1|1465|cysteine and glycine-rich protein 1
hg18_v1_chr14_-_105589467_105589979	0.0643322	SOX2.p2	BC041037|IGHM|3507|immunoglobulin heavy constant mu	BC018747|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	BC062335|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)	BC064496|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	AK097345|IGHA1|3493|immunoglobulin heavy constant alpha 1	AK123975|LOC100126583|100126583|hypothetical LOC100126583	BX640822|LOC100126583|100126583|hypothetical LOC100126583
hg18_v1_chr7_+_26158257_26158660	0.0642517	SOX2.p2	NM_004289|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3	BC068455|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3	AF133059|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3	AF134891|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3
hg18_v1_chr6_+_14033402_14033442	0.0642116	SOX2.p2	NM_001165033|RNF182|221687|ring finger protein 182	AK090576|RNF182|221687|ring finger protein 182
hg18_v1_chr4_-_189263395_189263401	0.0640686	SOX2.p2	BC111959|TRIML2|205860|tripartite motif family-like 2	BC111961|TRIML2|205860|tripartite motif family-like 2	BC143709|TRIML2|205860|tripartite motif family-like 2	AK098667|TRIML2|205860|tripartite motif family-like 2	NM_173553|TRIML2|205860|tripartite motif family-like 2
hg18_v1_chr4_+_72321113_72321188	0.0640537	SOX2.p2	AF069510|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AB470072|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AF053753|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AF053754|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AF310248|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	EF531618|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4
hg18_v1_chr20_-_1548589_1548688	0.0639346	SOX2.p2	BC131747|SIRPB1|10326|signal-regulatory protein beta 1	Y10376|SIRPB1|10326|signal-regulatory protein beta 1	BC025286|SIRPB1|10326|signal-regulatory protein beta 1	BC075835|SIRPB1|10326|signal-regulatory protein beta 1	AK289866|SIRPB1|10326|signal-regulatory protein beta 1	BX537992|SIRPB1|10326|signal-regulatory protein beta 1	NM_001083910|SIRPB1|10326|signal-regulatory protein beta 1	NM_001135844|SIRPB1|10326|signal-regulatory protein beta 1	NM_006065|SIRPB1|10326|signal-regulatory protein beta 1
hg18_v1_chr5_+_140235114_140235241	0.0638122	SOX2.p2	NM_018903|PCDHA12|56137|protocadherin alpha 12	NM_031864|PCDHA12|56137|protocadherin alpha 12	BC112280|PCDHA12|56137|protocadherin alpha 12	BC113372|PCDHA12|56137|protocadherin alpha 12	AF152308|PCDHA12|56137|protocadherin alpha 12	AF152477|PCDHA12|56137|protocadherin alpha 12
hg18_v1_chr4_+_40953666_40953685	0.0637361	SOX2.p2	CR605906|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	BC000332|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	BC018838|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)
hg18_v1_chrX_-_55074125_55074221	0.063689	SOX2.p2	CR620984|ALAS2|212|aminolevulinate, delta-, synthase 2	AK291589|ALAS2|212|aminolevulinate, delta-, synthase 2	X60364|ALAS2|212|aminolevulinate, delta-, synthase 2	AK313118|ALAS2|212|aminolevulinate, delta-, synthase 2	NM_000032|ALAS2|212|aminolevulinate, delta-, synthase 2	NM_001037967|ALAS2|212|aminolevulinate, delta-, synthase 2	NM_001037968|ALAS2|212|aminolevulinate, delta-, synthase 2
hg18_v1_chr21_-_18697829_18697843	0.0634752	SOX2.p2	BC111749|TMPRSS15|5651|transmembrane protease, serine 15	NM_002772|TMPRSS15|5651|transmembrane protease, serine 15	U09860|TMPRSS15|5651|transmembrane protease, serine 15
hg18_v1_chr1_+_26973804_26973947	0.0634489	SOX2.p2	AK074940|ARID1A|8289|AT rich interactive domain 1A (SWI-like)	AK308363|ARID1A|8289|AT rich interactive domain 1A (SWI-like)
hg18_v1_chr2_+_104837004_104837008	0.0633777	SOX2.p2	
hg18_v1_chr8_-_42817604_42817632	0.0633734	SOX2.p2	AL832077|THAP1|55145|THAP domain containing, apoptosis associated protein 1	BC021721|THAP1|55145|THAP domain containing, apoptosis associated protein 1	AK223231|THAP1|55145|THAP domain containing, apoptosis associated protein 1	AK001339|THAP1|55145|THAP domain containing, apoptosis associated protein 1	NM_018105|THAP1|55145|THAP domain containing, apoptosis associated protein 1	NM_199003|THAP1|55145|THAP domain containing, apoptosis associated protein 1
hg18_v1_chr11_+_117680504_117680877	0.0633584	SOX2.p2	NM_000733|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)	CR591071|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)	AK301255|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)	AK311641|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)	AK292612|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)	CR609568|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)	BC049847|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)	X03884|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)	CR610563|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)
hg18_v1_chr1_+_110683467_110683568	0.0633361	SOX2.p2	AF368062|RBM15|64783|RNA binding motif protein 15	AF368063|RBM15|64783|RNA binding motif protein 15	AF368064|RBM15|64783|RNA binding motif protein 15	NM_022768|RBM15|64783|RNA binding motif protein 15	BC098140|RBM15|64783|RNA binding motif protein 15	BC103493|RBM15|64783|RNA binding motif protein 15	BC103507|RBM15|64783|RNA binding motif protein 15	BC103660|RBM15|64783|RNA binding motif protein 15
hg18_v1_chr11_-_46572073_46572149	0.0632619	SOX2.p2	AL834190|AMBRA1|55626|autophagy/beclin-1 regulator 1	AK057896|AMBRA1|55626|autophagy/beclin-1 regulator 1	AK000301|AMBRA1|55626|autophagy/beclin-1 regulator 1	AB051523|AMBRA1|55626|autophagy/beclin-1 regulator 1
hg18_v1_chr11_-_70350509_70350520	0.0631898	SOX2.p2	AK095088|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2
hg18_v1_chr7_-_116854765_116854812	0.063178	SOX2.p2	AK093445|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	BC126186|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	BC126188|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	BC144207|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	BC144212|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	AF461259|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	BC028695|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	BC034963|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	BC098399|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	BC068488|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	NM_130768|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1
hg18_v1_chr20_-_1420168_1420232	0.0631662	SOX2.p2	NM_001122962|SIRPB2|284759|signal-regulatory protein beta 2	NM_001134836|SIRPB2|284759|signal-regulatory protein beta 2
hg18_v1_chr20_-_30703219_30703443	0.0631515	SOX2.p2	BC105014|C20orf203|284805|chromosome 20 open reading frame 203	BC105042|C20orf203|284805|chromosome 20 open reading frame 203	AK091025|C20orf203|284805|chromosome 20 open reading frame 203	NM_182584|C20orf203|284805|chromosome 20 open reading frame 203
hg18_v1_chr4_-_170314382_170314407	0.0631363	SOX2.p2	BC041023|SH3RF1|57630|SH3 domain containing ring finger 1
hg18_v1_chr1_+_219119358_219119411	0.0630818	SOX2.p2	AK056326|HLX|3142|H2.0-like homeobox	NM_021958|HLX|3142|H2.0-like homeobox	BC007294|HLX|3142|H2.0-like homeobox	AB208812|HLX|3142|H2.0-like homeobox	M60721|HLX|3142|H2.0-like homeobox
hg18_v1_chr11_-_56951088_56951127	0.0630367	SOX2.p2	AK311394|SLC43A3|29015|solute carrier family 43, member 3	NM_014096|SLC43A3|29015|solute carrier family 43, member 3
hg18_v1_chr6_+_123359278_123359280	0.0630076	SOX2.p2	BC101377|CLVS2|134829|clavesin 2	BC101376|CLVS2|134829|clavesin 2	NM_001010852|CLVS2|134829|clavesin 2
hg18_v1_chr16_+_24475129_24475130	0.0629506	SOX2.p2	BC029649|RBBP6|5930|retinoblastoma binding protein 6
hg18_v1_chr11_-_18018880_18018910	0.0629226	SOX2.p2	AY196345|TPH1|7166|tryptophan hydroxylase 1	BC106739|TPH1|7166|tryptophan hydroxylase 1	BC106740|TPH1|7166|tryptophan hydroxylase 1	X52836|TPH1|7166|tryptophan hydroxylase 1	NM_004179|TPH1|7166|tryptophan hydroxylase 1
hg18_v1_chr15_+_32048380_32048380	0.0629203	SOX2.p2	AK095198|CHRM5|1133|cholinergic receptor, muscarinic 5	NM_012125|CHRM5|1133|cholinergic receptor, muscarinic 5
hg18_v1_chr6_-_29635456_29635489	0.0628284	SOX2.p2	DQ894624|UBD|10537|ubiquitin D	Y12653|UBD|10537|ubiquitin D	BC012472|UBD|10537|ubiquitin D	AK311914|UBD|10537|ubiquitin D
hg18_v1_chr1_-_174442987_174442997	0.0627607	SOX2.p2	BC094728|RFWD2|64326|ring finger and WD repeat domain 2	NM_001001740|RFWD2|64326|ring finger and WD repeat domain 2	NM_022457|RFWD2|64326|ring finger and WD repeat domain 2
hg18_v1_chr1_+_29113589_29113747	0.0625858	SOX2.p2	NM_001166006|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)	BC039079|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)	AK310655|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)
hg18_v1_chr12_+_74071116_74071137	0.0624763	SOX2.p2	BC016749|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2	AK093175|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2
hg18_v1_chr20_+_34428857_34428857	0.0624713	SOX2.p2	NM_014902|DLGAP4|22839|discs, large (Drosophila) homolog-associated protein 4
hg18_v1_chr4_-_138673078_138673107	0.0624188	SOX2.p2	AB046782|PCDH18|54510|protocadherin 18	NM_019035|PCDH18|54510|protocadherin 18	AK298607|PCDH18|54510|protocadherin 18	BC071581|PCDH18|54510|protocadherin 18	BX647786|PCDH18|54510|protocadherin 18
hg18_v1_chr1_+_120055941_120056168	0.0622808	SOX2.p2	NM_006623|PHGDH|26227|phosphoglycerate dehydrogenase	AK315360|PHGDH|26227|phosphoglycerate dehydrogenase	BC011262|PHGDH|26227|phosphoglycerate dehydrogenase	CR617402|PHGDH|26227|phosphoglycerate dehydrogenase	AK309662|PHGDH|26227|phosphoglycerate dehydrogenase	AK310132|PHGDH|26227|phosphoglycerate dehydrogenase	AF171237|PHGDH|26227|phosphoglycerate dehydrogenase	CR619716|PHGDH|26227|phosphoglycerate dehydrogenase	BC000303|PHGDH|26227|phosphoglycerate dehydrogenase	CR592544|PHGDH|26227|phosphoglycerate dehydrogenase	CR611188|PHGDH|26227|phosphoglycerate dehydrogenase	CR622574|PHGDH|26227|phosphoglycerate dehydrogenase	BC001349|PHGDH|26227|phosphoglycerate dehydrogenase	CR600485|PHGDH|26227|phosphoglycerate dehydrogenase	CR612347|PHGDH|26227|phosphoglycerate dehydrogenase	CR616251|PHGDH|26227|phosphoglycerate dehydrogenase	BC023235|PHGDH|26227|phosphoglycerate dehydrogenase	DQ892073|PHGDH|26227|phosphoglycerate dehydrogenase	EU176546|PHGDH|26227|phosphoglycerate dehydrogenase	CR456795|PHGDH|26227|phosphoglycerate dehydrogenase
hg18_v1_chr3_-_195835197_195835231	0.0620395	SOX2.p2	BX647418|TMEM44|93109|transmembrane protein 44
hg18_v1_chr8_-_105670300_105670398	0.0620298	SOX2.p2	DQ892323|LRP12|29967|low density lipoprotein receptor-related protein 12	DQ895525|LRP12|29967|low density lipoprotein receptor-related protein 12	BC032109|LRP12|29967|low density lipoprotein receptor-related protein 12	AK289752|LRP12|29967|low density lipoprotein receptor-related protein 12	AF166350|LRP12|29967|low density lipoprotein receptor-related protein 12	CR749434|LRP12|29967|low density lipoprotein receptor-related protein 12
hg18_v1_chr1_-_23730298_23730299	0.0618921	SOX2.p2	L22846|E2F2|1870|E2F transcription factor 2	NM_004091|E2F2|1870|E2F transcription factor 2
hg18_v1_chr15_+_62578671_62578671	0.0618172	SOX2.p2	NM_015042|ZNF609|23060|zinc finger protein 609
hg18_v1_chr15_+_80741827_80741867	0.0615973	SOX2.p2	AK309746|LOC80154|80154|hypothetical LOC80154	AK310769|LOC80154|80154|hypothetical LOC80154	BC072390|LOC80154|80154|hypothetical LOC80154	AK291684|LOC80154|80154|hypothetical LOC80154	AK309420|LOC80154|80154|hypothetical LOC80154	AK307285|LOC80154|80154|hypothetical LOC80154
hg18_v1_chr7_-_150352484_150352518	0.0615914	SOX2.p2	BC128587|ATG9B|285973|ATG9 autophagy related 9 homolog B (S. cerevisiae)	AK096734|ATG9B|285973|ATG9 autophagy related 9 homolog B (S. cerevisiae)	AY515311|ATG9B|285973|ATG9 autophagy related 9 homolog B (S. cerevisiae)	NM_173681|ATG9B|285973|ATG9 autophagy related 9 homolog B (S. cerevisiae)
hg18_v1_chr3_-_113842553_113842594	0.0615818	SOX2.p2	BX647117|CCDC80|151887|coiled-coil domain containing 80	BC116178|CCDC80|151887|coiled-coil domain containing 80	BC116179|CCDC80|151887|coiled-coil domain containing 80	AY333429|CCDC80|151887|coiled-coil domain containing 80	AF506819|CCDC80|151887|coiled-coil domain containing 80
hg18_v1_chr15_-_70385709_70385709	0.0615642	SOX2.p2	AK294382|CELF6|60677|CUGBP, Elav-like family member 6	NM_001172685|CELF6|60677|CUGBP, Elav-like family member 6
hg18_v1_chr1_+_159395853_159395911	0.0615453	SOX2.p2	NM_001014443|USP21|27005|ubiquitin specific peptidase 21	NM_012475|USP21|27005|ubiquitin specific peptidase 21	AB208899|USP21|27005|ubiquitin specific peptidase 21
hg18_v1_chr9_+_116943917_116943917	0.0612973	SOX2.p2	AB022761|DEC1|50514|deleted in esophageal cancer 1	NM_017418|DEC1|50514|deleted in esophageal cancer 1
hg18_v1_chr1_-_151873191_151873191	0.0612745	SOX2.p2	NM_001024210|S100A13|6284|S100 calcium binding protein A13
hg18_v1_chr1_-_151549790_151549817	0.0609608	SOX2.p2	BC128114|PGLYRP3|114771|peptidoglycan recognition protein 3	BC128115|PGLYRP3|114771|peptidoglycan recognition protein 3	BC069741|PGLYRP3|114771|peptidoglycan recognition protein 3	BC069798|PGLYRP3|114771|peptidoglycan recognition protein 3	BC069801|PGLYRP3|114771|peptidoglycan recognition protein 3	AY035376|PGLYRP3|114771|peptidoglycan recognition protein 3	NM_052891|PGLYRP3|114771|peptidoglycan recognition protein 3
hg18_v1_chr7_-_7541974_7541984	0.0609249	SOX2.p2	BC136892|COL28A1|340267|collagen, type XXVIII, alpha 1	BC144431|COL28A1|340267|collagen, type XXVIII, alpha 1	AJ890451|COL28A1|340267|collagen, type XXVIII, alpha 1	NM_001037763|COL28A1|340267|collagen, type XXVIII, alpha 1
hg18_v1_chr1_-_42549347_42549350	0.060914	SOX2.p2	
hg18_v1_chr1_-_246525502_246525502	0.0609046	SOX2.p2	NM_001004692|OR2T12|127064|olfactory receptor, family 2, subfamily T, member 12
hg18_v1_chr7_+_148475618_148475766	0.0606896	SOX2.p2	AY049744|ZNF398|57541|zinc finger protein 398
hg18_v1_chr19_+_55046229_55046455	0.0606399	SOX2.p2	AJ617480|PTOV1|53635|prostate tumor overexpressed 1	BC042921|PTOV1|53635|prostate tumor overexpressed 1	U79287|PTOV1|53635|prostate tumor overexpressed 1
hg18_v1_chr9_-_74735669_74735747	0.0606135	SOX2.p2	CR601139|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1
hg18_v1_chr3_+_170974745_170974983	0.0604642	SOX2.p2	AB079777|MYNN|55892|myoneurin	AB079778|MYNN|55892|myoneurin	NM_001185119|MYNN|55892|myoneurin	AB528460|MYNN|55892|myoneurin	DQ891596|MYNN|55892|myoneurin	DQ894790|MYNN|55892|myoneurin	AY515692|MYNN|55892|myoneurin	AY541761|MYNN|55892|myoneurin	AY515691|MYNN|55892|myoneurin
hg18_v1_chr1_-_39814659_39814737	0.0603767	SOX2.p2	BC029969|PABPC4|8761|poly(A) binding protein, cytoplasmic 4 (inducible form)
hg18_v1_chr11_+_44026106_44026140	0.0603462	SOX2.p2	AB231734|ACCSL|390110|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)-like	NM_001031854|ACCSL|390110|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)-like	BC144554|ACCSL|390110|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)-like
hg18_v1_chr5_+_65258250_65258310	0.0602097	SOX2.p2	AF276423|ERBB2IP|55914|erbb2 interacting protein	BC050692|ERBB2IP|55914|erbb2 interacting protein
hg18_v1_chrX_-_53465847_53465890	0.0601917	SOX2.p2	BX640922|SMC1A|8243|structural maintenance of chromosomes 1A
hg18_v1_chr6_-_123999640_123999844	0.0601096	SOX2.p2	NM_006073|TRDN|10345|triadin	U18985|TRDN|10345|triadin	BC139910|TRDN|10345|triadin	AK291867|TRDN|10345|triadin	BC012590|TRDN|10345|triadin	BC029393|TRDN|10345|triadin	BC057222|TRDN|10345|triadin	BC070290|TRDN|10345|triadin	AJ489257|TRDN|10345|triadin	AK307619|TRDN|10345|triadin
hg18_v1_chr11_+_125730760_125730771	0.0600854	SOX2.p2	CR603316|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4	CR613427|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4	CR620801|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4
hg18_v1_chrX_-_101613387_101613417	0.060007	SOX2.p2	AK057385|NXF2|56001|nuclear RNA export factor 2	AK093310|NXF2|56001|nuclear RNA export factor 2	BX647232|NXF2|56001|nuclear RNA export factor 2	NM_001099686|NXF2B|728343|nuclear RNA export factor 2B	NM_017809|NXF2|56001|nuclear RNA export factor 2	AK303069|NXF2B|728343|nuclear RNA export factor 2B
hg18_v1_chr7_+_56086960_56087060	0.0598297	SOX2.p2	AK316230|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	CR590985|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	AF385084|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	AK297751|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	CR605318|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	CR612852|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	AK298371|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	AK313819|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	CR600067|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	CR626783|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	CR613031|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	CR626775|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	AB209728|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	CR609340|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	AM295155|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)
hg18_v1_chr5_+_140494971_140495201	0.0597776	SOX2.p2	AK023190|PCDHB5|26167|protocadherin beta 5	NM_015669|PCDHB5|26167|protocadherin beta 5	BC001186|PCDHB5|26167|protocadherin beta 5	AB209393|PCDHB5|26167|protocadherin beta 5	AF134474|PCDHB5|26167|protocadherin beta 5	AF152498|PCDHB5|26167|protocadherin beta 5	AF217753|PCDHB5|26167|protocadherin beta 5	DQ891873|PCDHB5|26167|protocadherin beta 5	DQ895061|PCDHB5|26167|protocadherin beta 5
hg18_v1_chr13_-_34948758_34948835	0.0597398	SOX2.p2	BC028170|MAB21L1|4081|mab-21-like 1 (C. elegans)	CR624056|MAB21L1|4081|mab-21-like 1 (C. elegans)	AK313185|MAB21L1|4081|mab-21-like 1 (C. elegans)	AB073388|MAB21L1|4081|mab-21-like 1 (C. elegans)	NM_005584|MAB21L1|4081|mab-21-like 1 (C. elegans)
hg18_v1_chr2_+_178767317_178767623	0.0595964	SOX2.p2	AB208898|OSBPL6|114880|oxysterol binding protein-like 6	BC052259|OSBPL6|114880|oxysterol binding protein-like 6	AK300389|OSBPL6|114880|oxysterol binding protein-like 6	NM_032523|OSBPL6|114880|oxysterol binding protein-like 6	AF323728|OSBPL6|114880|oxysterol binding protein-like 6	AF392448|OSBPL6|114880|oxysterol binding protein-like 6
hg18_v1_chr11_-_780065_780091	0.0595357	SOX2.p2	CR625212|CEND1|51286|cell cycle exit and neuronal differentiation 1	CR625795|CEND1|51286|cell cycle exit and neuronal differentiation 1
hg18_v1_chr12_-_10142779_10142930	0.0595207	SOX2.p2	CR606141|CLEC1A|51267|C-type lectin domain family 1, member A	CR598502|CLEC1A|51267|C-type lectin domain family 1, member A	DQ892440|CLEC1A|51267|C-type lectin domain family 1, member A	DQ895651|CLEC1A|51267|C-type lectin domain family 1, member A	CR614400|CLEC1A|51267|C-type lectin domain family 1, member A	AK300979|CLEC1A|51267|C-type lectin domain family 1, member A	AK291584|CLEC1A|51267|C-type lectin domain family 1, member A	CR619172|CLEC1A|51267|C-type lectin domain family 1, member A	CR591145|CLEC1A|51267|C-type lectin domain family 1, member A	CR591231|CLEC1A|51267|C-type lectin domain family 1, member A	BC039072|CLEC1A|51267|C-type lectin domain family 1, member A	CR604680|CLEC1A|51267|C-type lectin domain family 1, member A	AK313589|CLEC1A|51267|C-type lectin domain family 1, member A	AK075114|CLEC1A|51267|C-type lectin domain family 1, member A	BC067746|CLEC1A|51267|C-type lectin domain family 1, member A	AF200949|CLEC1A|51267|C-type lectin domain family 1, member A	NM_016511|CLEC1A|51267|C-type lectin domain family 1, member A	AK091989|CLEC1A|51267|C-type lectin domain family 1, member A	AY358587|CLEC1A|51267|C-type lectin domain family 1, member A
hg18_v1_chr1_+_151873174_151873354	0.0594071	SOX2.p2	AF318362|C1orf77|26097|chromosome 1 open reading frame 77	AK095230|C1orf77|26097|chromosome 1 open reading frame 77	AK308713|C1orf77|26097|chromosome 1 open reading frame 77	AK309844|C1orf77|26097|chromosome 1 open reading frame 77	CR612307|C1orf77|26097|chromosome 1 open reading frame 77	BC120961|C1orf77|26097|chromosome 1 open reading frame 77	BC120962|C1orf77|26097|chromosome 1 open reading frame 77
hg18_v1_chr10_-_105208634_105208637	0.0593762	SOX2.p2	BC036193|CALHM1|255022|calcium homeostasis modulator 1	BC036208|CALHM1|255022|calcium homeostasis modulator 1	NM_001001412|CALHM1|255022|calcium homeostasis modulator 1
hg18_v1_chr11_-_125730655_125730691	0.0593344	SOX2.p2	AK096370|FLJ39051|399972|hypothetical LOC399972
hg18_v1_chr20_-_1298493_1298697	0.0591833	SOX2.p2	CR615284|FKBP1A|2280|FK506 binding protein 1A, 12kDa	CR602019|FKBP1A|2280|FK506 binding protein 1A, 12kDa
hg18_v1_chr4_-_91979113_91979291	0.0591203	SOX2.p2	CR596371|TMSL3|7117|thymosin-like 3	CR605307|TMSL3|7117|thymosin-like 3	CR624038|TMSL3|7117|thymosin-like 3	CR621963|TMSL3|7117|thymosin-like 3	NM_183049|TMSL3|7117|thymosin-like 3
hg18_v1_chr18_+_21967813_21967880	0.0591194	SOX2.p2	BC042820|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	NM_001025096|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	NM_001025097|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	NM_144662|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	BC025393|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	BC028371|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	BC028686|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	BC025389|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	BC047355|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8	BC021713|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8
hg18_v1_chr7_-_35260213_35260298	0.0589797	SOX2.p2	NM_001077653|TBX20|57057|T-box 20	NM_001166220|TBX20|57057|T-box 20	DQ986374|TBX20|57057|T-box 20
hg18_v1_chrX_+_153318452_153318533	0.0589235	SOX2.p2	NM_001493|GDI1|2664|GDP dissociation inhibitor 1
hg18_v1_chr1_-_102235377_102235380	0.0588627	SOX2.p2	NM_058170|OLFM3|118427|olfactomedin 3
hg18_v1_chr6_+_72653369_72653379	0.058815	SOX2.p2	BC151853|RIMS1|22999|regulating synaptic membrane exocytosis 1	AB002338|RIMS1|22999|regulating synaptic membrane exocytosis 1	BC152435|RIMS1|22999|regulating synaptic membrane exocytosis 1	NM_014989|RIMS1|22999|regulating synaptic membrane exocytosis 1
hg18_v1_chr17_+_28279283_28279349	0.0587574	SOX2.p2	AL117619|TMEM98|26022|transmembrane protein 98	CR593283|TMEM98|26022|transmembrane protein 98	CR597085|TMEM98|26022|transmembrane protein 98	AK313569|TMEM98|26022|transmembrane protein 98	CR596889|TMEM98|26022|transmembrane protein 98	CR613257|TMEM98|26022|transmembrane protein 98	AY358573|TMEM98|26022|transmembrane protein 98	CR617431|TMEM98|26022|transmembrane protein 98	CR606539|TMEM98|26022|transmembrane protein 98	BC000526|TMEM98|26022|transmembrane protein 98
hg18_v1_chr5_+_95093267_95093318	0.058743	SOX2.p2	
hg18_v1_chr7_+_150319076_150319124	0.058672	SOX2.p2	NM_000603|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	BC063294|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	AK300390|NOS3|4846|nitric oxide synthase 3 (endothelial cell)
hg18_v1_chr5_+_71538456_71538583	0.0586529	SOX2.p2	AK125194|MAP1B|4131|microtubule-associated protein 1B
hg18_v1_chr3_-_47798390_47798412	0.0586034	SOX2.p2	BC012101|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	NM_003074|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
hg18_v1_chr11_+_66764060_66764060	0.058511	SOX2.p2	AK096194|LOC100131150|100131150|hypothetical protein LOC100131150
hg18_v1_chr12_+_46802695_46802829	0.0585087	SOX2.p2	NM_001166687|PFKM|5213|phosphofructokinase, muscle	NM_001166688|PFKM|5213|phosphofructokinase, muscle	Y00698|PFKM|5213|phosphofructokinase, muscle	BC000534|PFKM|5213|phosphofructokinase, muscle	BC012799|PFKM|5213|phosphofructokinase, muscle	BC013298|PFKM|5213|phosphofructokinase, muscle	BC007798|PFKM|5213|phosphofructokinase, muscle
hg18_v1_chr7_+_73341640_73341807	0.0583687	SOX2.p2	AB006629|CLIP2|7461|CAP-GLY domain containing linker protein 2	BC150332|CLIP2|7461|CAP-GLY domain containing linker protein 2	NM_003388|CLIP2|7461|CAP-GLY domain containing linker protein 2	NM_032421|CLIP2|7461|CAP-GLY domain containing linker protein 2
hg18_v1_chr19_-_50688310_50688357	0.058326	SOX2.p2	AF004224|RTN2|6253|reticulon 2	NM_206901|RTN2|6253|reticulon 2
hg18_v1_chr1_-_43692134_43692246	0.0583108	SOX2.p2	AK096244|HYI|81888|hydroxypyruvate isomerase (putative)	AY037165|HYI|81888|hydroxypyruvate isomerase (putative)	AY775560|HYI|81888|hydroxypyruvate isomerase (putative)	NM_001190880|HYI|81888|hydroxypyruvate isomerase (putative)	NM_031207|HYI|81888|hydroxypyruvate isomerase (putative)
hg18_v1_chr8_-_110415448_110415646	0.0583094	SOX2.p2	AK301278|NUDCD1|84955|NudC domain containing 1	BC000967|NUDCD1|84955|NudC domain containing 1	AK027897|NUDCD1|84955|NudC domain containing 1	BC043406|NUDCD1|84955|NudC domain containing 1	AK315006|NUDCD1|84955|NudC domain containing 1	CR603601|NUDCD1|84955|NudC domain containing 1	BC031258|NUDCD1|84955|NudC domain containing 1	NM_032869|NUDCD1|84955|NudC domain containing 1	AF283301|NUDCD1|84955|NudC domain containing 1
hg18_v1_chr4_+_57468792_57468833	0.0582987	SOX2.p2	NM_005612|REST|5978|RE1-silencing transcription factor
hg18_v1_chr1_-_3556420_3556530	0.0582303	SOX2.p2	CR626114|WDR8|49856|WD repeat domain 8	CR619231|WDR8|49856|WD repeat domain 8	CR605005|WDR8|49856|WD repeat domain 8	AB034912|WDR8|49856|WD repeat domain 8	CR597189|WDR8|49856|WD repeat domain 8	AK000437|WDR8|49856|WD repeat domain 8	AK225525|WDR8|49856|WD repeat domain 8	BC002611|WDR8|49856|WD repeat domain 8	BC086311|WDR8|49856|WD repeat domain 8	CR613845|WDR8|49856|WD repeat domain 8	CR599166|WDR8|49856|WD repeat domain 8	CR596816|WDR8|49856|WD repeat domain 8	AK302397|WDR8|49856|WD repeat domain 8	NM_017818|WDR8|49856|WD repeat domain 8
hg18_v1_chr7_-_115458047_115458061	0.0582142	SOX2.p2	AK313546|TFEC|22797|transcription factor EC
hg18_v1_chr19_+_7608020_7608035	0.0581544	SOX2.p2	AB002559|STXBP2|6813|syntaxin binding protein 2	U63533|STXBP2|6813|syntaxin binding protein 2	CR611383|STXBP2|6813|syntaxin binding protein 2	AK302257|STXBP2|6813|syntaxin binding protein 2	CR620863|STXBP2|6813|syntaxin binding protein 2	BT006915|STXBP2|6813|syntaxin binding protein 2
hg18_v1_chr2_+_188865796_188865857	0.0581089	SOX2.p2	BC068525|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1	CR619595|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1	AF191771|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1	AF200715|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1	AF075014|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1
hg18_v1_chr11_+_62231741_62231882	0.0580445	SOX2.p2	AK311933|GNG3|2785|guanine nucleotide binding protein (G protein), gamma 3	BC015563|GNG3|2785|guanine nucleotide binding protein (G protein), gamma 3	CR625883|GNG3|2785|guanine nucleotide binding protein (G protein), gamma 3	CR620191|GNG3|2785|guanine nucleotide binding protein (G protein), gamma 3
hg18_v1_chr12_+_54231249_54231277	0.0580377	SOX2.p2	BC137000|OR6C4|341418|olfactory receptor, family 6, subfamily C, member 4	BC137001|OR6C4|341418|olfactory receptor, family 6, subfamily C, member 4	NM_001005494|OR6C4|341418|olfactory receptor, family 6, subfamily C, member 4
hg18_v1_chr1_-_114855281_114855321	0.0580089	SOX2.p2	AF119043|TRIM33|51592|tripartite motif containing 33	AF220136|TRIM33|51592|tripartite motif containing 33	AF220137|TRIM33|51592|tripartite motif containing 33	NM_015906|TRIM33|51592|tripartite motif containing 33	NM_033020|TRIM33|51592|tripartite motif containing 33
hg18_v1_chr20_+_30831298_30831318	0.0579467	SOX2.p2	AF176228|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta	NM_175850|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta
hg18_v1_chr12_-_86947276_86947306	0.0578574	SOX2.p2	AL833338|C12orf50|160419|chromosome 12 open reading frame 50	BC062424|C12orf50|160419|chromosome 12 open reading frame 50	AK093140|C12orf50|160419|chromosome 12 open reading frame 50	NM_152589|C12orf50|160419|chromosome 12 open reading frame 50
hg18_v1_chr12_-_54965996_54966141	0.0577856	SOX2.p2	BC000105|CS|1431|citrate synthase	AF147410|CS|1431|citrate synthase	AK293263|CS|1431|citrate synthase
hg18_v1_chr1_+_246591505_246591505	0.0576765	SOX2.p2	NM_001004696|OR2T4|127074|olfactory receptor, family 2, subfamily T, member 4
hg18_v1_chr19_-_57924946_57924946	0.0575418	SOX2.p2	AK097434|ZNF611|81856|zinc finger protein 611	NM_030972|ZNF611|81856|zinc finger protein 611
hg18_v1_chr18_+_54681657_54682014	0.0574424	SOX2.p2	AB046849|ZNF532|55205|zinc finger protein 532
hg18_v1_chr16_-_76026431_76026511	0.0574266	SOX2.p2	AK293831|ADAMTS18|170692|ADAM metallopeptidase with thrombospondin type 1 motif, 18	BC063283|ADAMTS18|170692|ADAM metallopeptidase with thrombospondin type 1 motif, 18	NM_199355|ADAMTS18|170692|ADAM metallopeptidase with thrombospondin type 1 motif, 18
hg18_v1_chr18_+_647461_647632	0.0574096	SOX2.p2	CR601528|TYMS|7298|thymidylate synthetase	NM_001071|TYMS|7298|thymidylate synthetase	BC083512|TYMS|7298|thymidylate synthetase	AK223372|TYMS|7298|thymidylate synthetase	BC013919|TYMS|7298|thymidylate synthetase
hg18_v1_chr1_+_84646621_84646738	0.0573445	SOX2.p2	AF333389|DNASE2B|58511|deoxyribonuclease II beta	NM_058248|DNASE2B|58511|deoxyribonuclease II beta	BC080621|DNASE2B|58511|deoxyribonuclease II beta	BC065182|DNASE2B|58511|deoxyribonuclease II beta
hg18_v1_chr12_+_7348194_7348194	0.057318	SOX2.p2	NM_001080454|ACSM4|341392|acyl-CoA synthetase medium-chain family member 4
hg18_v1_chr3_-_117647053_117647074	0.0572203	SOX2.p2	BC033803|LSAMP|4045|limbic system-associated membrane protein	NM_002338|LSAMP|4045|limbic system-associated membrane protein
hg18_v1_chr7_-_64088848_64088848	0.0572088	SOX2.p2	M55422|ZNF117|51351|zinc finger protein 117	NM_015852|ZNF117|51351|zinc finger protein 117
hg18_v1_chr1_+_211190476_211190605	0.0571971	SOX2.p2	AK290973|VASH2|79805|vasohibin 2	NM_001136474|VASH2|79805|vasohibin 2	NM_001136475|VASH2|79805|vasohibin 2	NM_024749|VASH2|79805|vasohibin 2	AK022567|VASH2|79805|vasohibin 2	AK096605|VASH2|79805|vasohibin 2	BC053836|VASH2|79805|vasohibin 2	BC051856|VASH2|79805|vasohibin 2	BC028194|VASH2|79805|vasohibin 2
hg18_v1_chr3_-_46761248_46761248	0.0571743	SOX2.p2	BC133695|PRSS45|377047|protease, serine, 45	NM_199183|PRSS45|377047|protease, serine, 45
hg18_v1_chr12_-_21980894_21980894	0.0571417	SOX2.p2	NM_005691|ABCC9|10060|ATP-binding cassette, sub-family C (CFTR/MRP), member 9	NM_020297|ABCC9|10060|ATP-binding cassette, sub-family C (CFTR/MRP), member 9	NM_020298|ABCC9|10060|ATP-binding cassette, sub-family C (CFTR/MRP), member 9
hg18_v1_chr4_-_87500201_87500239	0.0570642	SOX2.p2	BC022492|MAPK10|5602|mitogen-activated protein kinase 10	BC035057|MAPK10|5602|mitogen-activated protein kinase 10
hg18_v1_chr5_+_139008667_139008718	0.05703	SOX2.p2	AK001782|CXXC5|51523|CXXC finger protein 5
hg18_v1_chr4_-_77163609_77163673	0.0569669	SOX2.p2	DQ892786|CXCL10|3627|chemokine (C-X-C motif) ligand 10	DQ896033|CXCL10|3627|chemokine (C-X-C motif) ligand 10	BC010954|CXCL10|3627|chemokine (C-X-C motif) ligand 10	NM_001565|CXCL10|3627|chemokine (C-X-C motif) ligand 10	X02530|CXCL10|3627|chemokine (C-X-C motif) ligand 10
hg18_v1_chr1_+_205736095_205736308	0.0569118	SOX2.p2	NM_000573|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)	NM_000651|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)	AK309342|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)	AK298486|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)	Y00816|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)	BC032550|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)	X14362|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)
hg18_v1_chr8_-_38577891_38577956	0.0568494	SOX2.p2	
hg18_v1_chr4_+_176076083_176076133	0.0567135	SOX2.p2	NM_001130703|ADAM29|11086|ADAM metallopeptidase domain 29	NM_001130704|ADAM29|11086|ADAM metallopeptidase domain 29	NM_001130705|ADAM29|11086|ADAM metallopeptidase domain 29	NM_014269|ADAM29|11086|ADAM metallopeptidase domain 29	AK292410|ADAM29|11086|ADAM metallopeptidase domain 29	BC036070|ADAM29|11086|ADAM metallopeptidase domain 29
hg18_v1_chr17_-_10362583_10362583	0.0566589	SOX2.p2	AK310004|MYH1|4619|myosin, heavy chain 1, skeletal muscle, adult	NM_005963|MYH1|4619|myosin, heavy chain 1, skeletal muscle, adult
hg18_v1_chr1_+_216585298_216585370	0.0566356	SOX2.p2	NM_001135599|TGFB2|7042|transforming growth factor, beta 2	NM_003238|TGFB2|7042|transforming growth factor, beta 2	AB209842|TGFB2|7042|transforming growth factor, beta 2
hg18_v1_chr1_-_12830728_12830899	0.0566194	SOX2.p2	BC171859|LOC649330|649330|heterogeneous nuclear ribonucleoprotein C-like	BC171865|LOC649330|649330|heterogeneous nuclear ribonucleoprotein C-like	BC171866|HNRNPCL1|343069|heterogeneous nuclear ribonucleoprotein C-like 1	NM_001146181|LOC649330|649330|heterogeneous nuclear ribonucleoprotein C-like
hg18_v1_chr8_+_61592097_61592104	0.0565292	SOX2.p2	AK312344|RAB2A|5862|RAB2A, member RAS oncogene family
hg18_v1_chr4_+_41235077_41235091	0.0565055	SOX2.p2	AL831962|LIMCH1|22998|LIM and calponin homology domains 1
hg18_v1_chr3_-_166278969_166278976	0.0564294	SOX2.p2	BC132834|SI|6476|sucrase-isomaltase (alpha-glucosidase)	BC132860|SI|6476|sucrase-isomaltase (alpha-glucosidase)	BC115033|SI|6476|sucrase-isomaltase (alpha-glucosidase)	BC115034|SI|6476|sucrase-isomaltase (alpha-glucosidase)	BC116452|SI|6476|sucrase-isomaltase (alpha-glucosidase)	BC116453|SI|6476|sucrase-isomaltase (alpha-glucosidase)	X63597|SI|6476|sucrase-isomaltase (alpha-glucosidase)	NM_001041|SI|6476|sucrase-isomaltase (alpha-glucosidase)
hg18_v1_chr6_-_117853710_117853738	0.056366	SOX2.p2	M34353|ROS1|6098|c-ros oncogene 1 , receptor tyrosine kinase	NM_002944|ROS1|6098|c-ros oncogene 1 , receptor tyrosine kinase
hg18_v1_chr16_-_4263001_4263026	0.0563207	SOX2.p2	NM_003223|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)	S73885|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)
hg18_v1_chrX_+_72140076_72140206	0.0563066	SOX2.p2	NM_001042506|PABPC1L2B|645974|poly(A) binding protein, cytoplasmic 1-like 2B	BC041956|PABPC1L2B|645974|poly(A) binding protein, cytoplasmic 1-like 2B	BC136492|PABPC1L2B|645974|poly(A) binding protein, cytoplasmic 1-like 2B
hg18_v1_chr17_+_55269974_55270203	0.0562911	SOX2.p2	
hg18_v1_chr3_+_157877146_157877146	0.056225	SOX2.p2	BC034397|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase	NM_001184718|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase
hg18_v1_chr2_-_157890400_157890661	0.0562127	SOX2.p2	AB033015|ERMN|57471|ermin, ERM-like protein	DQ334271|ERMN|57471|ermin, ERM-like protein	BC026345|ERMN|57471|ermin, ERM-like protein	AK295844|ERMN|57471|ermin, ERM-like protein	NM_020711|ERMN|57471|ermin, ERM-like protein
hg18_v1_chr7_+_80105858_80105901	0.0561575	SOX2.p2	BC008406|CD36|948|CD36 molecule (thrombospondin receptor)
hg18_v1_chr11_+_111551417_111551688	0.0561566	SOX2.p2	NM_031938|BCO2|83875|beta-carotene oxygenase 2	AK315300|BCO2|83875|beta-carotene oxygenase 2	BC041656|BCO2|83875|beta-carotene oxygenase 2	BC047934|BCO2|83875|beta-carotene oxygenase 2	AK091783|BCO2|83875|beta-carotene oxygenase 2	AJ290393|BCO2|83875|beta-carotene oxygenase 2	AF276432|BCO2|83875|beta-carotene oxygenase 2
hg18_v1_chr1_+_24158887_24158897	0.0561274	SOX2.p2	NM_017761|PNRC2|55629|proline-rich nuclear receptor coactivator 2
hg18_v1_chr18_+_54039730_54039754	0.0560774	SOX2.p2	AY243319|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	NM_001144966|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like
hg18_v1_chr16_+_55523526_55523759	0.0560628	SOX2.p2	AK302167|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	AB034989|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	AK223233|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	AK291565|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	AK292088|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	AK304800|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	BC009739|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	DQ837586|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	AF055001|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	D14695|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	BC000086|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	BC008320|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	CR625367|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	BC032673|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	DQ891867|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	EU176642|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	CR457116|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	AF055003|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1
hg18_v1_chr15_-_43457916_43458146	0.0560605	SOX2.p2	S68805|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)	BC004141|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)	AK098055|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)	AK223585|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)	AK294995|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)	AK298350|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)
hg18_v1_chr2_-_160838397_160838474	0.0560463	SOX2.p2	BC069687|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	BC069706|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	BC069763|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	BC080620|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	BC065192|RBMS1|5937|RNA binding motif, single stranded interacting protein 1
hg18_v1_chr16_+_56230707_56230930	0.0559985	SOX2.p2	NM_001145774|GPR56|9289|G protein-coupled receptor 56	AK297236|GPR56|9289|G protein-coupled receptor 56	AK311156|GPR56|9289|G protein-coupled receptor 56	BC013207|GPR56|9289|G protein-coupled receptor 56
hg18_v1_chr2_-_85494639_85494656	0.0559614	SOX2.p2	AK313898|CAPG|822|capping protein (actin filament), gelsolin-like	AK300507|CAPG|822|capping protein (actin filament), gelsolin-like
hg18_v1_chr7_+_37689903_37689911	0.0559312	SOX2.p2	
hg18_v1_chr1_+_240078655_240078762	0.0559102	SOX2.p2	NM_003686|EXO1|9156|exonuclease 1	NM_006027|EXO1|9156|exonuclease 1	AF042282|EXO1|9156|exonuclease 1	AF091740|EXO1|9156|exonuclease 1	AF060479|EXO1|9156|exonuclease 1	AF084974|EXO1|9156|exonuclease 1
hg18_v1_chr10_+_35504526_35504555	0.0558043	SOX2.p2	AY292864|CREM|1390|cAMP responsive element modulator	NM_182769|CREM|1390|cAMP responsive element modulator	NM_182770|CREM|1390|cAMP responsive element modulator	BC090051|CREM|1390|cAMP responsive element modulator	AK301906|CREM|1390|cAMP responsive element modulator
hg18_v1_chr5_+_137701852_137701854	0.0556827	SOX2.p2	AK027412|FAM53C|51307|family with sequence similarity 53, member C	AK310378|FAM53C|51307|family with sequence similarity 53, member C	AK315567|FAM53C|51307|family with sequence similarity 53, member C
hg18_v1_chr11_-_62231636_62231775	0.0556796	SOX2.p2	NM_001122955|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)
hg18_v1_chrX_+_70420194_70420219	0.0556268	SOX2.p2	AK297144|NONO|4841|non-POU domain containing, octamer-binding
hg18_v1_chr13_+_51334117_51334274	0.0555764	SOX2.p2	AK098719|CCDC70|83446|coiled-coil domain containing 70	NM_031290|CCDC70|83446|coiled-coil domain containing 70	AK225745|CCDC70|83446|coiled-coil domain containing 70	AL136887|CCDC70|83446|coiled-coil domain containing 70	BC069691|CCDC70|83446|coiled-coil domain containing 70	BC069748|CCDC70|83446|coiled-coil domain containing 70	BC069770|CCDC70|83446|coiled-coil domain containing 70	BC069806|CCDC70|83446|coiled-coil domain containing 70
hg18_v1_chr4_-_40631397_40631473	0.0555745	SOX2.p2	BC088372|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2
hg18_v1_chr5_+_137701855_137701909	0.055457	SOX2.p2	BC000259|FAM53C|51307|family with sequence similarity 53, member C	AF251040|FAM53C|51307|family with sequence similarity 53, member C
hg18_v1_chr2_-_55413253_55413327	0.0554249	SOX2.p2	BC056885|CCDC88A|55704|coiled-coil domain containing 88A
hg18_v1_chr10_+_35934343_35934343	0.0553781	SOX2.p2	AK074504|GJD4|219770|gap junction protein, delta 4, 40.1kDa	NM_153368|GJD4|219770|gap junction protein, delta 4, 40.1kDa
hg18_v1_chr11_+_5667392_5667453	0.0553681	SOX2.p2	AK298934|TRIM22|10346|tripartite motif containing 22
hg18_v1_chr8_+_87947788_87947791	0.0553246	SOX2.p2	AK093121|CNBD1|168975|cyclic nucleotide binding domain containing 1	BC117326|CNBD1|168975|cyclic nucleotide binding domain containing 1	BC117328|CNBD1|168975|cyclic nucleotide binding domain containing 1	NM_173538|CNBD1|168975|cyclic nucleotide binding domain containing 1
hg18_v1_chr4_+_78298326_78298709	0.055315	SOX2.p2	L49506|CCNG2|901|cyclin G2	AK293899|CCNG2|901|cyclin G2	BT019503|CCNG2|901|cyclin G2	CR542181|CCNG2|901|cyclin G2	CR542200|CCNG2|901|cyclin G2	DQ890836|CCNG2|901|cyclin G2	DQ893991|CCNG2|901|cyclin G2
hg18_v1_chr3_+_180763440_180763575	0.0551713	SOX2.p2	AB061315|ACTL6A|86|actin-like 6A	AK223212|ACTL6A|86|actin-like 6A	AK021756|ACTL6A|86|actin-like 6A	CR621230|ACTL6A|86|actin-like 6A	AB015907|ACTL6A|86|actin-like 6A	BC001391|ACTL6A|86|actin-like 6A	EU832285|ACTL6A|86|actin-like 6A	EU832370|ACTL6A|86|actin-like 6A	CR533529|ACTL6A|86|actin-like 6A
hg18_v1_chr10_+_123913094_123913348	0.0551552	SOX2.p2	NM_006997|TACC2|10579|transforming, acidic coiled-coil containing protein 2	NM_206860|TACC2|10579|transforming, acidic coiled-coil containing protein 2	BC141837|TACC2|10579|transforming, acidic coiled-coil containing protein 2	BC142673|TACC2|10579|transforming, acidic coiled-coil containing protein 2	AF095791|TACC2|10579|transforming, acidic coiled-coil containing protein 2
hg18_v1_chr11_+_94440045_94440068	0.0550363	SOX2.p2	AF031166|SRSF8|10929|serine/arginine-rich splicing factor 8
hg18_v1_chr9_+_138341752_138341823	0.0548805	SOX2.p2	BC009979|GPSM1|26086|G-protein signaling modulator 1	BC017353|GPSM1|26086|G-protein signaling modulator 1	NM_001145638|GPSM1|26086|G-protein signaling modulator 1	NM_015597|GPSM1|26086|G-protein signaling modulator 1
hg18_v1_chr3_+_9748427_9748433	0.0548391	SOX2.p2	BC068262|BRPF1|7862|bromodomain and PHD finger containing, 1	BC036374|BRPF1|7862|bromodomain and PHD finger containing, 1	NM_001003694|BRPF1|7862|bromodomain and PHD finger containing, 1	NM_004634|BRPF1|7862|bromodomain and PHD finger containing, 1
hg18_v1_chr11_-_5819702_5819702	0.05482	SOX2.p2	NM_001005167|OR52E6|390078|olfactory receptor, family 52, subfamily E, member 6
hg18_v1_chr1_-_68688219_68688229	0.0547929	SOX2.p2	AK289925|RPE65|6121|retinal pigment epithelium-specific protein 65kDa	BC075035|RPE65|6121|retinal pigment epithelium-specific protein 65kDa	BC075036|RPE65|6121|retinal pigment epithelium-specific protein 65kDa	NM_000329|RPE65|6121|retinal pigment epithelium-specific protein 65kDa	U18991|RPE65|6121|retinal pigment epithelium-specific protein 65kDa
hg18_v1_chr4_+_68107039_68107122	0.0547392	SOX2.p2	AB023483|STAP1|26228|signal transducing adaptor family member 1	NM_012108|STAP1|26228|signal transducing adaptor family member 1	AK313676|STAP1|26228|signal transducing adaptor family member 1	BC014958|STAP1|26228|signal transducing adaptor family member 1
hg18_v1_chr7_-_13997574_13997574	0.0546893	SOX2.p2	NM_001163148|ETV1|2115|ets variant 1
hg18_v1_chr20_-_1420126_1420142	0.0546452	SOX2.p2	AK297072|SIRPB2|284759|signal-regulatory protein beta 2
hg18_v1_chr6_-_33028790_33028876	0.0545826	SOX2.p2	CR450324|HLA-DMA|3108|major histocompatibility complex, class II, DM alpha	DQ892839|HLA-DMA|3108|major histocompatibility complex, class II, DM alpha	DQ896086|HLA-DMA|3108|major histocompatibility complex, class II, DM alpha	BC026279|HLA-DMA|3108|major histocompatibility complex, class II, DM alpha	AK291858|HLA-DMA|3108|major histocompatibility complex, class II, DM alpha	X62744|HLA-DMA|3108|major histocompatibility complex, class II, DM alpha	BC011447|HLA-DMA|3108|major histocompatibility complex, class II, DM alpha	NM_006120|HLA-DMA|3108|major histocompatibility complex, class II, DM alpha
hg18_v1_chr15_-_38953628_38953850	0.0545434	SOX2.p2	AY059636|RHOV|171177|ras homolog gene family, member V	CR615243|RHOV|171177|ras homolog gene family, member V	BC112945|RHOV|171177|ras homolog gene family, member V	CR618466|RHOV|171177|ras homolog gene family, member V	BC019353|RHOV|171177|ras homolog gene family, member V	BC105020|RHOV|171177|ras homolog gene family, member V	BC105022|RHOV|171177|ras homolog gene family, member V	AB079131|RHOV|171177|ras homolog gene family, member V	CR599960|RHOV|171177|ras homolog gene family, member V	NM_133639|RHOV|171177|ras homolog gene family, member V
hg18_v1_chr1_-_115060956_115061037	0.0544937	SOX2.p2	NM_002524|NRAS|4893|neuroblastoma RAS viral (v-ras) oncogene homolog
hg18_v1_chr4_+_86968069_86968088	0.0544831	SOX2.p2	AK307423|ARHGAP24|83478|Rho GTPase activating protein 24
hg18_v1_chr11_+_128069183_128069198	0.0544554	SOX2.p2	M93255|FLI1|2313|Friend leukemia virus integration 1	AK300153|FLI1|2313|Friend leukemia virus integration 1	M98833|FLI1|2313|Friend leukemia virus integration 1
hg18_v1_chr2_+_208284610_208284670	0.0543501	SOX2.p2	BC047293|CCNYL1|151195|cyclin Y-like 1
hg18_v1_chr21_-_31049566_31049616	0.054346	SOX2.p2	NM_181619|KRTAP21-1|337977|keratin associated protein 21-1	AB096960|KRTAP21-1|337977|keratin associated protein 21-1	BC105029|KRTAP21-1|337977|keratin associated protein 21-1	BC105031|KRTAP21-1|337977|keratin associated protein 21-1
hg18_v1_chrX_+_70420237_70420257	0.0541481	SOX2.p2	CR605046|NONO|4841|non-POU domain containing, octamer-binding	CR614502|NONO|4841|non-POU domain containing, octamer-binding	BC028299|NONO|4841|non-POU domain containing, octamer-binding	BC012141|NONO|4841|non-POU domain containing, octamer-binding	BC025352|NONO|4841|non-POU domain containing, octamer-binding	BC025280|NONO|4841|non-POU domain containing, octamer-binding	BC002364|NONO|4841|non-POU domain containing, octamer-binding
hg18_v1_chr19_-_53239030_53239115	0.0541243	SOX2.p2	BC126133|CABP5|56344|calcium binding protein 5	BC126135|CABP5|56344|calcium binding protein 5	AF169159|CABP5|56344|calcium binding protein 5	NM_019855|CABP5|56344|calcium binding protein 5
hg18_v1_chr1_+_181075059_181075101	0.0540371	SOX2.p2	NM_001357|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	AK226102|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9
hg18_v1_chr1_+_159395912_159396026	0.0539991	SOX2.p2	BC090946|USP21|27005|ubiquitin specific peptidase 21	AK292319|USP21|27005|ubiquitin specific peptidase 21	AK310326|USP21|27005|ubiquitin specific peptidase 21	AF233442|USP21|27005|ubiquitin specific peptidase 21	AF217979|USP21|27005|ubiquitin specific peptidase 21	AF177758|USP21|27005|ubiquitin specific peptidase 21
hg18_v1_chr22_+_44059491_44059558	0.0539727	SOX2.p2	AF085808|UPK3A|7380|uroplakin 3A	BC069544|UPK3A|7380|uroplakin 3A	NM_001167574|UPK3A|7380|uroplakin 3A	NM_006953|UPK3A|7380|uroplakin 3A	BC108900|UPK3A|7380|uroplakin 3A	CR456608|UPK3A|7380|uroplakin 3A	AB010637|UPK3A|7380|uroplakin 3A	CU013204|UPK3A|7380|uroplakin 3A	CU013492|UPK3A|7380|uroplakin 3A
hg18_v1_chr15_-_99609648_99609668	0.0539674	SOX2.p2	BC046247|CHSY1|22856|chondroitin sulfate synthase 1	AY358529|CHSY1|22856|chondroitin sulfate synthase 1	AB023207|CHSY1|22856|chondroitin sulfate synthase 1	NM_014918|CHSY1|22856|chondroitin sulfate synthase 1
hg18_v1_chr11_+_6898780_6898808	0.0539536	SOX2.p2	BC137208|OR2D3|120775|olfactory receptor, family 2, subfamily D, member 3	BC137209|OR2D3|120775|olfactory receptor, family 2, subfamily D, member 3	NM_001004684|OR2D3|120775|olfactory receptor, family 2, subfamily D, member 3
hg18_v1_chr14_-_57688669_57688685	0.0537818	SOX2.p2	AK292513|C14orf37|145407|chromosome 14 open reading frame 37
hg18_v1_chr5_+_179854029_179854099	0.0537235	SOX2.p2	AB033020|CNOT6|57472|CCR4-NOT transcription complex, subunit 6	BC152469|CNOT6|57472|CCR4-NOT transcription complex, subunit 6
hg18_v1_chr8_+_61592105_61592132	0.0536017	SOX2.p2	NM_002865|RAB2A|5862|RAB2A, member RAS oncogene family	X12953|RAB2A|5862|RAB2A, member RAS oncogene family	BC008929|RAB2A|5862|RAB2A, member RAS oncogene family
hg18_v1_chr13_-_52320774_52320779	0.0535919	SOX2.p2	AF061573|PCDH8|5100|protocadherin 8	NM_002590|PCDH8|5100|protocadherin 8	NM_032949|PCDH8|5100|protocadherin 8	AK293747|PCDH8|5100|protocadherin 8	AK297652|PCDH8|5100|protocadherin 8	BC036025|PCDH8|5100|protocadherin 8
hg18_v1_chr5_-_176671897_176671915	0.0535825	SOX2.p2	NM_001142935|MXD3|83463|MAX dimerization protein 3	NM_031300|MXD3|83463|MAX dimerization protein 3	CR595562|MXD3|83463|MAX dimerization protein 3
hg18_v1_chr1_+_151873134_151873170	0.053562	SOX2.p2	AF261137|C1orf77|26097|chromosome 1 open reading frame 77	NM_015607|C1orf77|26097|chromosome 1 open reading frame 77
hg18_v1_chr12_+_92487728_92487728	0.0535436	SOX2.p2	NM_003877|SOCS2|8835|suppressor of cytokine signaling 2
hg18_v1_chr3_-_47798381_47798382	0.053539	SOX2.p2	BC032564|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
hg18_v1_chr22_+_29333069_29333351	0.0534829	SOX2.p2	NM_000355|TCN2|6948|transcobalamin II	NM_001184726|TCN2|6948|transcobalamin II	CR604069|TCN2|6948|transcobalamin II	AK313711|TCN2|6948|transcobalamin II	BC011239|TCN2|6948|transcobalamin II	BC001176|TCN2|6948|transcobalamin II	L02647|TCN2|6948|transcobalamin II	L02648|TCN2|6948|transcobalamin II	AK225445|TCN2|6948|transcobalamin II	CR456591|TCN2|6948|transcobalamin II	M60396|TCN2|6948|transcobalamin II	CU013191|TCN2|6948|transcobalamin II	CU013479|TCN2|6948|transcobalamin II	DQ892811|TCN2|6948|transcobalamin II	DQ896057|TCN2|6948|transcobalamin II	CR590469|TCN2|6948|transcobalamin II
hg18_v1_chr4_+_55218663_55219119	0.0534665	SOX2.p2	NM_000222|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	NM_001093772|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	BC071593|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	AK304031|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	X06182|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	GU983671|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	HM015525|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	HM015526|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	EU826594|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog
hg18_v1_chr3_-_168674502_168674527	0.0534649	SOX2.p2	AK226025|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2	AB006423|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2	NM_006217|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2	AK293391|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2
hg18_v1_chrX_+_119621933_119622010	0.0533654	SOX2.p2	BC095461|MCTS1|28985|malignant T cell amplified sequence 1
hg18_v1_chr4_+_83570789_83570838	0.0533214	SOX2.p2	AK022656|ENOPH1|58478|enolase-phosphatase 1	CR615673|ENOPH1|58478|enolase-phosphatase 1	BC065815|ENOPH1|58478|enolase-phosphatase 1	CR623426|ENOPH1|58478|enolase-phosphatase 1	CR593619|ENOPH1|58478|enolase-phosphatase 1	BC001317|ENOPH1|58478|enolase-phosphatase 1
hg18_v1_chr9_+_66197108_66197135	0.053178	SOX2.p2	
hg18_v1_chr3_+_188397967_188398105	0.0531633	SOX2.p2	BC065202|RTP1|132112|receptor (chemosensory) transporter protein 1	NM_153708|RTP1|132112|receptor (chemosensory) transporter protein 1	BC034744|RTP1|132112|receptor (chemosensory) transporter protein 1	DQ890807|RTP1|132112|receptor (chemosensory) transporter protein 1	DQ893962|RTP1|132112|receptor (chemosensory) transporter protein 1	AY562235|RTP1|132112|receptor (chemosensory) transporter protein 1
hg18_v1_chr11_-_27679617_27679755	0.0531232	SOX2.p2	CR616691|BDNF|627|brain-derived neurotrophic factor	AB038672|BDNF|627|brain-derived neurotrophic factor	AY054397|BDNF|627|brain-derived neurotrophic factor	BC029795|BDNF|627|brain-derived neurotrophic factor	EF674521|BDNF|627|brain-derived neurotrophic factor	NM_170733|BDNF|627|brain-derived neurotrophic factor
hg18_v1_chr6_-_135417522_135417641	0.0528757	SOX2.p2	EU831981|HBS1L|10767|HBS1-like (S. cerevisiae)	EU832074|HBS1L|10767|HBS1-like (S. cerevisiae)	BC040849|HBS1L|10767|HBS1-like (S. cerevisiae)	AJ420551|HBS1L|10767|HBS1-like (S. cerevisiae)	BC001465|HBS1L|10767|HBS1-like (S. cerevisiae)
hg18_v1_chr19_+_3523958_3523999	0.0527539	SOX2.p2	AK314201|HMG20B|10362|high-mobility group 20B	AK090733|HMG20B|10362|high-mobility group 20B	AK310601|HMG20B|10362|high-mobility group 20B	AF318366|HMG20B|10362|high-mobility group 20B
hg18_v1_chr19_+_10626106_10626230	0.0527093	SOX2.p2	AF141870|ILF3|3609|interleukin enhancer binding factor 3, 90kDa
hg18_v1_chr11_-_77730573_77730573	0.0526757	SOX2.p2	AB011143|GAB2|9846|GRB2-associated binding protein 2	BC152459|GAB2|9846|GRB2-associated binding protein 2	NM_012296|GAB2|9846|GRB2-associated binding protein 2
hg18_v1_chr13_-_29937966_29938021	0.0526752	SOX2.p2	X12597|HMGB1|3146|high-mobility group box 1	D63874|HMGB1|3146|high-mobility group box 1	CR616734|HMGB1P6|645292|high-mobility group box 1 pseudogene 6	AB208998|HMGB1|3146|high-mobility group box 1	BC141844|HMGB1|3146|high-mobility group box 1	CR625251|HMGB1|3146|high-mobility group box 1	BC003378|HMGB1|3146|high-mobility group box 1	CR613151|HMGB1|3146|high-mobility group box 1	BC066889|HMGB1|3146|high-mobility group box 1	CR592914|HMGB1|3146|high-mobility group box 1	BC030981|HMGB1|3146|high-mobility group box 1	BC067732|HMGB1|3146|high-mobility group box 1
hg18_v1_chr1_-_150862202_150862202	0.0526729	SOX2.p2	AB528786|LCE3A|353142|late cornified envelope 3A	BC120933|LCE3A|353142|late cornified envelope 3A	BC120934|LCE3A|353142|late cornified envelope 3A	NM_178431|LCE3A|353142|late cornified envelope 3A
hg18_v1_chr11_+_125730773_125730817	0.0526476	SOX2.p2	CR598875|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4	CR616349|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4	CR602167|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4	CR614162|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4	CR595606|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4	CR595607|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4	CR624587|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4	CR614499|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4
hg18_v1_chr1_+_40612891_40612935	0.0526358	SOX2.p2	NM_001198978|SMAP2|64744|small ArfGAP2	AK303975|SMAP2|64744|small ArfGAP2	AL133206|SMAP2|64744|small ArfGAP2
hg18_v1_chr6_+_72653126_72653172	0.0525985	SOX2.p2	AB045726|RIMS1|22999|regulating synaptic membrane exocytosis 1	AB051866|RIMS1|22999|regulating synaptic membrane exocytosis 1
hg18_v1_chr10_+_22674379_22674546	0.0524999	SOX2.p2	CR591720|SPAG6|9576|sperm associated antigen 6	AK302194|SPAG6|9576|sperm associated antigen 6	NM_012443|SPAG6|9576|sperm associated antigen 6	NM_172242|SPAG6|9576|sperm associated antigen 6	AF079363|SPAG6|9576|sperm associated antigen 6	AK310247|SPAG6|9576|sperm associated antigen 6	AK289903|SPAG6|9576|sperm associated antigen 6	AL080136|SPAG6|9576|sperm associated antigen 6	BC030585|SPAG6|9576|sperm associated antigen 6	AM392674|SPAG6|9576|sperm associated antigen 6	AM392698|SPAG6|9576|sperm associated antigen 6	DQ890916|SPAG6|9576|sperm associated antigen 6	DQ894067|SPAG6|9576|sperm associated antigen 6	CR533552|SPAG6|9576|sperm associated antigen 6
hg18_v1_chr4_+_3341521_3341521	0.0524913	SOX2.p2	AF030109|RGS12|6002|regulator of G-protein signaling 12	NM_198227|RGS12|6002|regulator of G-protein signaling 12
hg18_v1_chr7_+_103756339_103756570	0.0524719	SOX2.p2	AY260763|LHFPL3|375612|lipoma HMGIC fusion partner-like 3	NM_199000|LHFPL3|375612|lipoma HMGIC fusion partner-like 3	BC129937|LHFPL3|375612|lipoma HMGIC fusion partner-like 3	BC129938|LHFPL3|375612|lipoma HMGIC fusion partner-like 3	BC129941|LHFPL3|375612|lipoma HMGIC fusion partner-like 3	AK299759|LHFPL3|375612|lipoma HMGIC fusion partner-like 3	AK124251|LHFPL3|375612|lipoma HMGIC fusion partner-like 3
hg18_v1_chr6_-_10523203_10523320	0.0524127	SOX2.p2	FJ794945|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)	M61156|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)	M36711|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)	X52611|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)
hg18_v1_chr4_+_53986759_53986864	0.052404	SOX2.p2	CR595922|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	BC026724|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg18_v1_chr1_-_203985896_203985931	0.0522875	SOX2.p2	BC000805|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1	AB049824|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1	AK300416|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1
hg18_v1_chr1_+_109057078_109057078	0.0521578	SOX2.p2	NM_001144937|FNDC7|163479|fibronectin type III domain containing 7
hg18_v1_chr19_-_59516155_59516220	0.0521462	SOX2.p2	AF499917|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5	EU915611|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5	EU915612|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5	AF499916|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5	AF499919|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5	AF499918|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5	NM_181879|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5	NM_181985|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5	NM_181986|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5	AF324830|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5	NM_021250|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5
hg18_v1_chr9_+_132990760_132990830	0.0520944	SOX2.p2	BC105998|NUP214|8021|nucleoporin 214kDa	AK307573|NUP214|8021|nucleoporin 214kDa	NM_005085|NUP214|8021|nucleoporin 214kDa	AL832609|NUP214|8021|nucleoporin 214kDa	X64228|NUP214|8021|nucleoporin 214kDa	BC045620|NUP214|8021|nucleoporin 214kDa	BC012500|NUP214|8021|nucleoporin 214kDa
hg18_v1_chr1_+_184532027_184532033	0.0520788	SOX2.p2	NM_001127708|PRG4|10216|proteoglycan 4	NM_001127709|PRG4|10216|proteoglycan 4	NM_001127710|PRG4|10216|proteoglycan 4	NM_005807|PRG4|10216|proteoglycan 4	AK301343|PRG4|10216|proteoglycan 4	AK057197|PRG4|10216|proteoglycan 4	AK297718|PRG4|10216|proteoglycan 4	AK301487|PRG4|10216|proteoglycan 4	AK308235|PRG4|10216|proteoglycan 4
hg18_v1_chr12_-_28014151_28014314	0.0520341	SOX2.p2	M26958|PTHLH|5744|parathyroid hormone-like hormone	J03802|PTHLH|5744|parathyroid hormone-like hormone	NM_198964|PTHLH|5744|parathyroid hormone-like hormone	NM_198966|PTHLH|5744|parathyroid hormone-like hormone	AK313476|PTHLH|5744|parathyroid hormone-like hormone	BC005961|PTHLH|5744|parathyroid hormone-like hormone	M26959|PTHLH|5744|parathyroid hormone-like hormone
hg18_v1_chr9_-_19023183_19023255	0.0519472	SOX2.p2	BC033489|FAM154A|158297|family with sequence similarity 154, member A	AK292245|FAM154A|158297|family with sequence similarity 154, member A	AK057474|FAM154A|158297|family with sequence similarity 154, member A	NM_153707|FAM154A|158297|family with sequence similarity 154, member A
hg18_v1_chr17_+_24598000_24598007	0.0517967	SOX2.p2	NM_005208|CRYBA1|1411|crystallin, beta A1	BC113693|CRYBA1|1411|crystallin, beta A1	BC069537|CRYBA1|1411|crystallin, beta A1
hg18_v1_chr5_+_140780797_140780978	0.0517677	SOX2.p2	BC136781|PCDHGA11|56105|protocadherin gamma subfamily A, 11	BC171774|PCDHGA11|56105|protocadherin gamma subfamily A, 11	AF152320|PCDHGA11|56105|protocadherin gamma subfamily A, 11	AF152504|PCDHGA11|56105|protocadherin gamma subfamily A, 11	AF152505|PCDHGA11|56105|protocadherin gamma subfamily A, 11
hg18_v1_chr4_+_169250281_169250426	0.0516726	SOX2.p2	BC007320|ANXA10|11199|annexin A10	NM_007193|ANXA10|11199|annexin A10	AF196478|ANXA10|11199|annexin A10	AJ238979|ANXA10|11199|annexin A10	EU176730|ANXA10|11199|annexin A10
hg18_v1_chr5_+_179853977_179854022	0.0515247	SOX2.p2	NM_015455|CNOT6|57472|CCR4-NOT transcription complex, subunit 6
hg18_v1_chr5_-_176258920_176258938	0.0515067	SOX2.p2	U51333|HK3|3101|hexokinase 3 (white cell)	BC028129|HK3|3101|hexokinase 3 (white cell)	NM_002115|HK3|3101|hexokinase 3 (white cell)
hg18_v1_chrX_+_100764757_100764838	0.0514867	SOX2.p2	AK291225|ARMCX3|51566|armadillo repeat containing, X-linked 3	NM_016607|ARMCX3|51566|armadillo repeat containing, X-linked 3	NM_177947|ARMCX3|51566|armadillo repeat containing, X-linked 3	CR616317|ARMCX3|51566|armadillo repeat containing, X-linked 3	CR626124|ARMCX3|51566|armadillo repeat containing, X-linked 3	BX647802|ARMCX3|51566|armadillo repeat containing, X-linked 3	AK222655|ARMCX3|51566|armadillo repeat containing, X-linked 3	AB039669|ARMCX3|51566|armadillo repeat containing, X-linked 3	BC005194|ARMCX3|51566|armadillo repeat containing, X-linked 3	CR933656|ARMCX3|51566|armadillo repeat containing, X-linked 3
hg18_v1_chrX_+_107174855_107174976	0.051442	SOX2.p2	BX648658|VSIG1|340547|V-set and immunoglobulin domain containing 1	NM_001170553|VSIG1|340547|V-set and immunoglobulin domain containing 1	NM_182607|VSIG1|340547|V-set and immunoglobulin domain containing 1	AK301783|VSIG1|340547|V-set and immunoglobulin domain containing 1	BC043216|VSIG1|340547|V-set and immunoglobulin domain containing 1	BX640913|VSIG1|340547|V-set and immunoglobulin domain containing 1	AK315846|VSIG1|340547|V-set and immunoglobulin domain containing 1	AK301311|VSIG1|340547|V-set and immunoglobulin domain containing 1	AK292472|VSIG1|340547|V-set and immunoglobulin domain containing 1
hg18_v1_chr4_-_107508040_107508040	0.0514235	SOX2.p2	NM_001195138|LOC100507096|100507096|GTPase IMAP family member-like
hg18_v1_chr11_-_16454493_16454510	0.0513708	SOX2.p2	AF309034|SOX6|55553|SRY (sex determining region Y)-box 6	NM_033326|SOX6|55553|SRY (sex determining region Y)-box 6
hg18_v1_chr1_-_67292286_67292443	0.0513196	SOX2.p2	BC093786|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1	BC112031|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1	AB044343|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1	D87449|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1
hg18_v1_chr6_-_91063301_91063365	0.0513049	SOX2.p2	AK309526|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2	NM_001170794|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2
hg18_v1_chrX_+_100220491_100220527	0.0512478	SOX2.p2	NM_021637|TMEM35|59353|transmembrane protein 35	AK024146|TMEM35|59353|transmembrane protein 35	AK223240|TMEM35|59353|transmembrane protein 35	AK297745|TMEM35|59353|transmembrane protein 35	BC050273|TMEM35|59353|transmembrane protein 35	BC078658|TMEM35|59353|transmembrane protein 35
hg18_v1_chr1_-_230945065_230945095	0.051203	SOX2.p2	
hg18_v1_chr1_-_43197123_43197195	0.0511963	SOX2.p2	AK292791|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1	AK293306|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1	AK296736|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1	AK312403|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1	AB208987|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1
hg18_v1_chr17_-_45621140_45621160	0.0511659	SOX2.p2	
hg18_v1_chr14_+_95915774_95915774	0.0510912	SOX2.p2	BC004818|C14orf129|51527|chromosome 14 open reading frame 129	NM_016472|C14orf129|51527|chromosome 14 open reading frame 129
hg18_v1_chr8_+_104900591_104900911	0.0510815	SOX2.p2	NM_014677|RIMS2|9699|regulating synaptic membrane exocytosis 2	AK307790|RIMS2|9699|regulating synaptic membrane exocytosis 2	AB018294|RIMS2|9699|regulating synaptic membrane exocytosis 2	BC043144|RIMS2|9699|regulating synaptic membrane exocytosis 2	AK308831|RIMS2|9699|regulating synaptic membrane exocytosis 2	BC018057|RIMS2|9699|regulating synaptic membrane exocytosis 2
hg18_v1_chr7_+_101245812_101246047	0.0510806	SOX2.p2	AK222832|CUX1|1523|cut-like homeobox 1	AK303151|CUX1|1523|cut-like homeobox 1	AK125097|CUX1|1523|cut-like homeobox 1	BC066592|CUX1|1523|cut-like homeobox 1	L12579|CUX1|1523|cut-like homeobox 1	NM_001913|CUX1|1523|cut-like homeobox 1	AK297548|CUX1|1523|cut-like homeobox 1	BC012323|CUX1|1523|cut-like homeobox 1	AK122726|CUX1|1523|cut-like homeobox 1	BC025422|CUX1|1523|cut-like homeobox 1	NM_181500|CUX1|1523|cut-like homeobox 1
hg18_v1_chr1_-_166372526_166372562	0.051043	SOX2.p2	AK298797|GPR161|23432|G protein-coupled receptor 161
hg18_v1_chr1_+_103898844_103898844	0.051026	SOX2.p2	NM_020978|AMY2B|280|amylase, alpha 2B (pancreatic)
hg18_v1_chr2_-_100088691_100088709	0.0510257	SOX2.p2	AK308645|AFF3|3899|AF4/FMR2 family, member 3
hg18_v1_chr1_-_52293356_52293476	0.0509543	SOX2.p2	BC008953|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	AK075409|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	BC001493|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	CR593611|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	CR612587|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	CR622088|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	BC008913|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	AY358982|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	AF131758|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	CR611104|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)
hg18_v1_chr5_+_96237923_96237965	0.0508863	SOX2.p2	AK312864|ERAP2|64167|endoplasmic reticulum aminopeptidase 2	AB109031|ERAP2|64167|endoplasmic reticulum aminopeptidase 2	AB163917|ERAP2|64167|endoplasmic reticulum aminopeptidase 2	BC065240|ERAP2|64167|endoplasmic reticulum aminopeptidase 2
hg18_v1_chr5_+_176492662_176492685	0.0508039	SOX2.p2	NM_172349|NSD1|64324|nuclear receptor binding SET domain protein 1
hg18_v1_chr3_+_38282301_38282400	0.0506136	SOX2.p2	NM_004256|SLC22A13|9390|solute carrier family 22 (organic anion transporter), member 13	AK315301|SLC22A13|9390|solute carrier family 22 (organic anion transporter), member 13	BC035973|SLC22A13|9390|solute carrier family 22 (organic anion transporter), member 13	AB010438|SLC22A13|9390|solute carrier family 22 (organic anion transporter), member 13	AK298375|SLC22A13|9390|solute carrier family 22 (organic anion transporter), member 13
hg18_v1_chr5_+_133479196_133479325	0.0505642	SOX2.p2	NM_001134851|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)	NM_201632|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)	NM_201634|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)	NM_213648|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)	X59869|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)	X59870|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)	X59871|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)	AK057580|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)	AK093530|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)
hg18_v1_chr16_+_52081836_52081927	0.0505105	SOX2.p2	CR608692|RBL2|5934|retinoblastoma-like 2 (p130)
hg18_v1_chr12_+_109424387_109424530	0.0504994	SOX2.p2	AK124109|RAD9B|144715|RAD9 homolog B (S. pombe)	NM_152442|RAD9B|144715|RAD9 homolog B (S. pombe)	AK301826|RAD9B|144715|RAD9 homolog B (S. pombe)	BC037353|RAD9B|144715|RAD9 homolog B (S. pombe)	AK302512|RAD9B|144715|RAD9 homolog B (S. pombe)	AY297459|RAD9B|144715|RAD9 homolog B (S. pombe)	BC068031|RAD9B|144715|RAD9 homolog B (S. pombe)	BC047645|RAD9B|144715|RAD9 homolog B (S. pombe)	AK097665|RAD9B|144715|RAD9 homolog B (S. pombe)
hg18_v1_chr21_-_46529663_46529703	0.0504724	SOX2.p2	AJ010089|MCM3AP|8888|minichromosome maintenance complex component 3 associated protein	NM_003906|MCM3AP|8888|minichromosome maintenance complex component 3 associated protein	BC104958|MCM3AP|8888|minichromosome maintenance complex component 3 associated protein	BC104960|MCM3AP|8888|minichromosome maintenance complex component 3 associated protein
hg18_v1_chr5_+_27508139_27508182	0.0504116	SOX2.p2	BC039509|LOC643401|643401|hypothetical protein LOC643401	BC046201|LOC643401|643401|hypothetical protein LOC643401
hg18_v1_chr4_+_184817477_184817533	0.0503693	SOX2.p2	BC139745|C4orf41|60684|chromosome 4 open reading frame 41
hg18_v1_chrX_-_20069678_20069916	0.0503663	SOX2.p2	BT007064|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	EU831819|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	EU831896|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	CR620297|EIF1AXP1|280661|eukaryotic translation initiation factor 1A, X-linked pseudogene 1	BC000793|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	BC110421|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	AK312320|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	BC067851|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	L18960|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	NM_001412|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked
hg18_v1_chr7_+_5904858_5904955	0.050317	SOX2.p2	BC067810|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	NM_015622|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	BC132749|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	BC132751|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	AK292326|C7orf28B|221960|chromosome 7 open reading frame 28B	CR595861|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	BC010130|C7orf28B|221960|chromosome 7 open reading frame 28B	CR602854|C7orf28B|221960|chromosome 7 open reading frame 28B
hg18_v1_chrX_+_11221453_11221474	0.0501818	SOX2.p2	AF436849|AMELX|265|amelogenin, X-linked	BC069118|AMELX|265|amelogenin, X-linked	M86932|AMELX|265|amelogenin, X-linked	NM_001142|AMELX|265|amelogenin, X-linked	NM_182680|AMELX|265|amelogenin, X-linked	NM_182681|AMELX|265|amelogenin, X-linked	BC074951|AMELX|265|amelogenin, X-linked
hg18_v1_chr6_-_134540666_134540705	0.050125	SOX2.p2	FM205708|SGK1|6446|serum/glucocorticoid regulated kinase 1	AK293383|SGK1|6446|serum/glucocorticoid regulated kinase 1	NM_001143677|SGK1|6446|serum/glucocorticoid regulated kinase 1
hg18_v1_chr20_-_43440290_43440446	0.0500821	SOX2.p2	BC036785|TP53TG5|27296|TP53 target 5	NM_014477|TP53TG5|27296|TP53 target 5	AB017802|TP53TG5|27296|TP53 target 5
hg18_v1_chr3_+_159310631_159310638	0.0500741	SOX2.p2	AK300388|RSRC1|51319|arginine/serine-rich coiled-coil 1
hg18_v1_chr4_+_17225344_17225384	0.0499656	SOX2.p2	AF318059|MED28|80306|mediator complex subunit 28	AK313928|MED28|80306|mediator complex subunit 28	CR605440|MED28|80306|mediator complex subunit 28	CR618837|MED28|80306|mediator complex subunit 28	CR619532|MED28|80306|mediator complex subunit 28	AF358829|MED28|80306|mediator complex subunit 28	NM_025205|MED28|80306|mediator complex subunit 28	BC011936|MED28|80306|mediator complex subunit 28	AF317680|MED28|80306|mediator complex subunit 28	DQ893391|MED28|80306|mediator complex subunit 28	DQ896713|MED28|80306|mediator complex subunit 28	AF317679|MED28|80306|mediator complex subunit 28	CR607989|MED28|80306|mediator complex subunit 28	AF317678|MED28|80306|mediator complex subunit 28
hg18_v1_chr10_-_50402148_50402364	0.0499248	SOX2.p2	BC028954|PGBD3|267004|piggyBac transposable element derived 3	AK074682|PGBD3|267004|piggyBac transposable element derived 3	BC063690|PGBD3|267004|piggyBac transposable element derived 3	NM_170753|PGBD3|267004|piggyBac transposable element derived 3
hg18_v1_chr10_+_35455806_35455963	0.0499247	SOX2.p2	NM_001881|CREM|1390|cAMP responsive element modulator	NM_182850|CREM|1390|cAMP responsive element modulator	NM_182853|CREM|1390|cAMP responsive element modulator	NM_183013|CREM|1390|cAMP responsive element modulator	BC066342|CREM|1390|cAMP responsive element modulator	BC017117|CREM|1390|cAMP responsive element modulator
hg18_v1_chr14_-_68689058_68689132	0.0499042	SOX2.p2	AL831932|DCAF5|8816|DDB1 and CUL4 associated factor 5
hg18_v1_chr17_-_53420595_53420639	0.0498661	SOX2.p2	NM_007146|VEZF1|7716|vascular endothelial zinc finger 1
hg18_v1_chr17_-_35017691_35017707	0.04984	SOX2.p2	BC022481|NEUROD2|4761|neurogenic differentiation 2	NM_006160|NEUROD2|4761|neurogenic differentiation 2
hg18_v1_chr3_-_47798347_47798362	0.0497997	SOX2.p2	BC113465|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	BC117213|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
hg18_v1_chr8_-_71146103_71146115	0.0497573	SOX2.p2	AF319458|PRDM14|63978|PR domain containing 14	AK022595|PRDM14|63978|PR domain containing 14	NM_024504|PRDM14|63978|PR domain containing 14
hg18_v1_chr1_-_26105477_26105579	0.0497395	SOX2.p2	BC082228|STMN1|3925|stathmin 1	AB209282|STMN1|3925|stathmin 1	X53305|STMN1|3925|stathmin 1	BX647885|STMN1|3925|stathmin 1	Z11566|STMN1|3925|stathmin 1	AK303692|STMN1|3925|stathmin 1	AK054594|STMN1|3925|stathmin 1	AK311801|STMN1|3925|stathmin 1	D28428|STMN1|3925|stathmin 1	J04991|STMN1|3925|stathmin 1	CR622594|STMN1|3925|stathmin 1	BC014353|STMN1|3925|stathmin 1	NM_001145454|STMN1|3925|stathmin 1	NM_005563|STMN1|3925|stathmin 1
hg18_v1_chr2_+_120233676_120234064	0.0496526	SOX2.p2	M68941|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)	NM_002830|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)	AK314836|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)	BC010674|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)
hg18_v1_chr5_-_32424352_32424402	0.0495707	SOX2.p2	AK295297|ZFR|51663|zinc finger RNA binding protein
hg18_v1_chr1_+_246635918_246635918	0.0494972	SOX2.p2	NM_030904|OR2T1|26696|olfactory receptor, family 2, subfamily T, member 1
hg18_v1_chr11_-_10671873_10671897	0.0493401	SOX2.p2	AK296336|MRVI1|10335|murine retrovirus integration site 1 homolog
hg18_v1_chr17_-_60088459_60088600	0.0493216	SOX2.p2	AF310676|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2	AF301463|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2	BC051283|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2	BC093876|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2	BC111945|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2
hg18_v1_chr17_+_29707583_29707706	0.0492619	SOX2.p2	NM_005408|CCL13|6357|chemokine (C-C motif) ligand 13	U59808|CCL13|6357|chemokine (C-C motif) ligand 13	AJ001634|CCL13|6357|chemokine (C-C motif) ligand 13	BC008621|CCL13|6357|chemokine (C-C motif) ligand 13	U46767|CCL13|6357|chemokine (C-C motif) ligand 13	X98306|CCL13|6357|chemokine (C-C motif) ligand 13	DQ891497|CCL13|6357|chemokine (C-C motif) ligand 13	DQ894688|CCL13|6357|chemokine (C-C motif) ligand 13	BT007385|CCL13|6357|chemokine (C-C motif) ligand 13	CR450337|CCL13|6357|chemokine (C-C motif) ligand 13	Z77650|CCL13|6357|chemokine (C-C motif) ligand 13
hg18_v1_chr2_+_190981257_190981360	0.0492483	SOX2.p2	AK127176|MFSD6|54842|major facilitator superfamily domain containing 6	NM_017694|MFSD6|54842|major facilitator superfamily domain containing 6
hg18_v1_chr1_+_172683834_172683872	0.0492309	SOX2.p2	BC095532|GPR52|9293|G protein-coupled receptor 52	NM_005684|GPR52|9293|G protein-coupled receptor 52	BC067456|GPR52|9293|G protein-coupled receptor 52	BC067457|GPR52|9293|G protein-coupled receptor 52	BC067458|GPR52|9293|G protein-coupled receptor 52	BC067459|GPR52|9293|G protein-coupled receptor 52	BC067460|GPR52|9293|G protein-coupled receptor 52	BC069460|GPR52|9293|G protein-coupled receptor 52
hg18_v1_chr10_+_59764718_59764967	0.0492287	SOX2.p2	CR603407|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	CR617065|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	CR619802|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	NM_003338|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	CR594114|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	AK291901|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	BC005980|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	BC015997|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	CR620939|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	AF257220|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	AJ272367|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	X78140|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	DQ893111|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	DQ896385|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	BT007041|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)
hg18_v1_chr12_+_109956210_109956300	0.0491111	SOX2.p2	BC151245|CUX2|23316|cut-like homeobox 2	NM_015267|CUX2|23316|cut-like homeobox 2	AB006631|CUX2|23316|cut-like homeobox 2	AF271236|CUX2|23316|cut-like homeobox 2
hg18_v1_chr11_-_780103_780125	0.0491007	SOX2.p2	BC034732|CEND1|51286|cell cycle exit and neuronal differentiation 1	AK074547|CEND1|51286|cell cycle exit and neuronal differentiation 1	AK312993|CEND1|51286|cell cycle exit and neuronal differentiation 1	NM_016564|CEND1|51286|cell cycle exit and neuronal differentiation 1
hg18_v1_chr2_-_20375497_20375564	0.049087	SOX2.p2	AF272350|PUM2|23369|pumilio homolog 2 (Drosophila)
hg18_v1_chr11_+_6475065_6475106	0.0490532	SOX2.p2	AK096944|DNHD1|144132|dynein heavy chain domain 1	NM_144666|DNHD1|144132|dynein heavy chain domain 1	NM_173589|DNHD1|144132|dynein heavy chain domain 1	BX648742|DNHD1|144132|dynein heavy chain domain 1
hg18_v1_chr12_+_32151351_32151530	0.0490487	SOX2.p2	AK313430|BICD1|636|bicaudal D homolog 1 (Drosophila)	AK290188|BICD1|636|bicaudal D homolog 1 (Drosophila)	NM_001003398|BICD1|636|bicaudal D homolog 1 (Drosophila)	NM_001714|BICD1|636|bicaudal D homolog 1 (Drosophila)	U90028|BICD1|636|bicaudal D homolog 1 (Drosophila)	BC136372|BICD1|636|bicaudal D homolog 1 (Drosophila)
hg18_v1_chr6_+_122762449_122762581	0.0490027	SOX2.p2	AK225593|HSF2|3298|heat shock transcription factor 2	AK225594|HSF2|3298|heat shock transcription factor 2	BC112323|HSF2|3298|heat shock transcription factor 2	M65217|HSF2|3298|heat shock transcription factor 2	AK294624|HSF2|3298|heat shock transcription factor 2	BC005329|HSF2|3298|heat shock transcription factor 2	CR604546|HSF2|3298|heat shock transcription factor 2	BC064622|HSF2|3298|heat shock transcription factor 2	BC121050|HSF2|3298|heat shock transcription factor 2	BC121051|HSF2|3298|heat shock transcription factor 2	BC128420|HSF2|3298|heat shock transcription factor 2	AK316377|HSF2|3298|heat shock transcription factor 2	EU446897|HSF2|3298|heat shock transcription factor 2
hg18_v1_chr21_+_33320080_33320162	0.048968	SOX2.p2	NM_005806|OLIG2|10215|oligodendrocyte lineage transcription factor 2	AK091462|OLIG2|10215|oligodendrocyte lineage transcription factor 2	BC047511|OLIG2|10215|oligodendrocyte lineage transcription factor 2	BC036245|OLIG2|10215|oligodendrocyte lineage transcription factor 2	BC034681|OLIG2|10215|oligodendrocyte lineage transcription factor 2	BC036275|OLIG2|10215|oligodendrocyte lineage transcription factor 2	AF221520|OLIG2|10215|oligodendrocyte lineage transcription factor 2
hg18_v1_chr15_-_35180656_35180813	0.0489383	SOX2.p2	BC050431|MEIS2|4212|Meis homeobox 2	NM_002399|MEIS2|4212|Meis homeobox 2	BC001516|MEIS2|4212|Meis homeobox 2	BC001844|MEIS2|4212|Meis homeobox 2	BC007202|MEIS2|4212|Meis homeobox 2	AK300247|MEIS2|4212|Meis homeobox 2
hg18_v1_chr19_+_44595589_44595589	0.0488937	SOX2.p2	AK024429|PLEKHG2|64857|pleckstrin homology domain containing, family G (with RhoGef domain) member 2	NM_022835|PLEKHG2|64857|pleckstrin homology domain containing, family G (with RhoGef domain) member 2
hg18_v1_chr15_+_80434362_80434411	0.0488712	SOX2.p2	BC066934|UBE2Q2P2|100134869|ubiquitin-conjugating enzyme E2Q family member 2 pseudogene 2
hg18_v1_chr11_-_66201794_66201881	0.0488414	SOX2.p2	AK095158|RBM4B|83759|RNA binding motif protein 4B	CR614869|RBM4B|83759|RNA binding motif protein 4B	BC004951|RBM4B|83759|RNA binding motif protein 4B	NM_031492|RBM4B|83759|RNA binding motif protein 4B
hg18_v1_chr5_+_65258316_65258356	0.0487394	SOX2.p2	BC126464|ERBB2IP|55914|erbb2 interacting protein	BC144075|ERBB2IP|55914|erbb2 interacting protein
hg18_v1_chr12_+_48765209_48765299	0.0486196	SOX2.p2	NM_003076|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	NM_139071|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	U66617|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	BC009368|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
hg18_v1_chr3_+_194793691_194793832	0.048486	SOX2.p2	BC043443|OPA1|4976|optic atrophy 1 (autosomal dominant)	BC075805|OPA1|4976|optic atrophy 1 (autosomal dominant)	AB011139|OPA1|4976|optic atrophy 1 (autosomal dominant)
hg18_v1_chr7_+_96583840_96583840	0.0484837	SOX2.p2	BC028409|ACN9|57001|ACN9 homolog (S. cerevisiae)	NM_020186|ACN9|57001|ACN9 homolog (S. cerevisiae)
hg18_v1_chr4_+_3288042_3288159	0.0484554	SOX2.p2	BC106944|RGS12|6002|regulator of G-protein signaling 12
hg18_v1_chr5_-_180163495_180163541	0.0481716	SOX2.p2	NM_001114619|MGAT1|4245|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase	NM_001114620|MGAT1|4245|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase	AK290769|MGAT1|4245|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase
hg18_v1_chr1_+_157824239_157824335	0.04812	SOX2.p2	BC007039|APCS|325|amyloid P component, serum	BC007058|APCS|325|amyloid P component, serum	BC070178|APCS|325|amyloid P component, serum	NM_001639|APCS|325|amyloid P component, serum	X04608|APCS|325|amyloid P component, serum	BT006750|APCS|325|amyloid P component, serum	CR450313|APCS|325|amyloid P component, serum	M10944|APCS|325|amyloid P component, serum
hg18_v1_chr3_-_87408301_87408426	0.0480517	SOX2.p2	L18781|POU1F1|5449|POU class 1 homeobox 1	X72215|POU1F1|5449|POU class 1 homeobox 1	X62429|POU1F1|5449|POU class 1 homeobox 1	D10216|POU1F1|5449|POU class 1 homeobox 1	NM_000306|POU1F1|5449|POU class 1 homeobox 1	NM_001122757|POU1F1|5449|POU class 1 homeobox 1
hg18_v1_chr1_-_205186330_205186438	0.0479889	SOX2.p2	BC110494|PIGR|5284|polymeric immunoglobulin receptor	BC110495|PIGR|5284|polymeric immunoglobulin receptor	CR749533|PIGR|5284|polymeric immunoglobulin receptor	S62403|PIGR|5284|polymeric immunoglobulin receptor	AF272149|PIGR|5284|polymeric immunoglobulin receptor	X73079|PIGR|5284|polymeric immunoglobulin receptor	AK225471|PIGR|5284|polymeric immunoglobulin receptor	NM_002644|PIGR|5284|polymeric immunoglobulin receptor
hg18_v1_chrX_+_70420221_70420233	0.047987	SOX2.p2	L14599|NONO|4841|non-POU domain containing, octamer-binding	AK291140|NONO|4841|non-POU domain containing, octamer-binding	BC003129|NONO|4841|non-POU domain containing, octamer-binding	CR597886|NONO|4841|non-POU domain containing, octamer-binding	CR619917|NONO|4841|non-POU domain containing, octamer-binding
hg18_v1_chr12_+_52132176_52132244	0.0479798	SOX2.p2	CR603638|PCBP2|5094|poly(rC) binding protein 2	BC035420|PCBP2|5094|poly(rC) binding protein 2	CR620547|PCBP2|5094|poly(rC) binding protein 2
hg18_v1_chr8_+_61592048_61592048	0.047954	SOX2.p2	AK297576|RAB2A|5862|RAB2A, member RAS oncogene family
hg18_v1_chr3_+_9748395_9748415	0.0479416	SOX2.p2	AK293865|BRPF1|7862|bromodomain and PHD finger containing, 1
hg18_v1_chr11_+_128069165_128069178	0.0479294	SOX2.p2	AK313370|FLI1|2313|Friend leukemia virus integration 1
hg18_v1_chr9_+_107464558_107464598	0.0478883	SOX2.p2	BC126373|TAL2|6887|T-cell acute lymphocytic leukemia 2	BC126375|TAL2|6887|T-cell acute lymphocytic leukemia 2	NM_005421|TAL2|6887|T-cell acute lymphocytic leukemia 2	BC069422|TAL2|6887|T-cell acute lymphocytic leukemia 2
hg18_v1_chr3_-_126325132_126325158	0.0478477	SOX2.p2	BC063528|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8	CR596399|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8
hg18_v1_chr1_-_20986345_20986383	0.0478008	SOX2.p2	BC046170|HP1BP3|50809|heterochromatin protein 1, binding protein 3	CR599334|HP1BP3|50809|heterochromatin protein 1, binding protein 3
hg18_v1_chr4_+_72423633_72423829	0.047791	SOX2.p2	BC030977|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	NM_003759|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AF007216|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AK308038|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4
hg18_v1_chr5_-_111121150_111121364	0.0476042	SOX2.p2	NM_001142479|C5orf13|9315|chromosome 5 open reading frame 13	NM_001142480|C5orf13|9315|chromosome 5 open reading frame 13	CR611883|C5orf13|9315|chromosome 5 open reading frame 13	CR597011|C5orf13|9315|chromosome 5 open reading frame 13	BC011050|C5orf13|9315|chromosome 5 open reading frame 13	NM_001142478|C5orf13|9315|chromosome 5 open reading frame 13	CR607755|C5orf13|9315|chromosome 5 open reading frame 13
hg18_v1_chr3_+_159310543_159310627	0.0476039	SOX2.p2	AK290334|RSRC1|51319|arginine/serine-rich coiled-coil 1	BC006982|RSRC1|51319|arginine/serine-rich coiled-coil 1	NM_016625|RSRC1|51319|arginine/serine-rich coiled-coil 1	AF208853|RSRC1|51319|arginine/serine-rich coiled-coil 1	BC010357|RSRC1|51319|arginine/serine-rich coiled-coil 1
hg18_v1_chrX_+_37735013_37735036	0.0475859	SOX2.p2	AF049615|CXorf27|25763|chromosome X open reading frame 27	NM_012274|CXorf27|25763|chromosome X open reading frame 27	BC104428|CXorf27|25763|chromosome X open reading frame 27	BC104429|CXorf27|25763|chromosome X open reading frame 27	BC113024|CXorf27|25763|chromosome X open reading frame 27	BC113025|CXorf27|25763|chromosome X open reading frame 27
hg18_v1_chr3_-_71715431_71715905	0.047581	SOX2.p2	AK122710|FOXP1|27086|forkhead box P1	BC005055|FOXP1|27086|forkhead box P1	BC054815|FOXP1|27086|forkhead box P1	BC071893|FOXP1|27086|forkhead box P1	BC080521|FOXP1|27086|forkhead box P1	BC068481|FOXP1|27086|forkhead box P1	NM_001012505|FOXP1|27086|forkhead box P1	NM_032682|FOXP1|27086|forkhead box P1
hg18_v1_chr19_+_46462189_46462367	0.0475021	SOX2.p2	BC014232|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	BC027713|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	BC004242|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	EU831487|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	EU831574|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1
hg18_v1_chr10_+_70418482_70418600	0.0474688	SOX2.p2	NM_015634|KIAA1279|26128|KIAA1279	AB033105|KIAA1279|26128|KIAA1279	BC006427|KIAA1279|26128|KIAA1279	CR593211|KIAA1279|26128|KIAA1279	AK291343|KIAA1279|26128|KIAA1279	BC012180|KIAA1279|26128|KIAA1279
hg18_v1_chr1_+_40688360_40688414	0.0474508	SOX2.p2	AK091612|ZNF643|65243|zinc finger protein 643	AL137241|ZNF643|65243|zinc finger protein 643
hg18_v1_chr1_-_202432165_202432250	0.0474415	SOX2.p2	AF218017|KISS1|3814|KiSS-1 metastasis-suppressor	CR618718|KISS1|3814|KiSS-1 metastasis-suppressor	BC022819|KISS1|3814|KiSS-1 metastasis-suppressor	CR603087|KISS1|3814|KiSS-1 metastasis-suppressor	CR609203|KISS1|3814|KiSS-1 metastasis-suppressor	CR622101|KISS1|3814|KiSS-1 metastasis-suppressor	CR625917|KISS1|3814|KiSS-1 metastasis-suppressor	AK291695|KISS1|3814|KiSS-1 metastasis-suppressor	NM_002256|KISS1|3814|KiSS-1 metastasis-suppressor	CR594921|KISS1|3814|KiSS-1 metastasis-suppressor
hg18_v1_chr2_-_61566477_61566607	0.0474142	SOX2.p2	CR609163|XPO1|7514|exportin 1 (CRM1 homolog, yeast)
hg18_v1_chr18_-_72857951_72858016	0.0473277	SOX2.p2	CR536534|MBP|4155|myelin basic protein	CR541919|MBP|4155|myelin basic protein	M30515|MBP|4155|myelin basic protein	M30516|MBP|4155|myelin basic protein	BC008749|MBP|4155|myelin basic protein	BC101771|MBP|4155|myelin basic protein	BC101773|MBP|4155|myelin basic protein	BC143348|MBP|4155|myelin basic protein	BC143350|MBP|4155|myelin basic protein	CR620021|MBP|4155|myelin basic protein	M30047|MBP|4155|myelin basic protein	CR596562|MBP|4155|myelin basic protein	BC080654|MBP|4155|myelin basic protein	CR608490|MBP|4155|myelin basic protein	M13577|MBP|4155|myelin basic protein	AK289893|MBP|4155|myelin basic protein	AK098402|MBP|4155|myelin basic protein	AK128788|MBP|4155|myelin basic protein	CR627018|MBP|4155|myelin basic protein	AK128770|MBP|4155|myelin basic protein	BC068550|MBP|4155|myelin basic protein	CR594138|MBP|4155|myelin basic protein
hg18_v1_chr3_-_47798372_47798376	0.0472933	SOX2.p2	BC065253|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
hg18_v1_chr21_+_40161216_40161278	0.0472595	SOX2.p2	NM_006198|PCP4|5121|Purkinje cell protein 4	U52969|PCP4|5121|Purkinje cell protein 4	AK289964|PCP4|5121|Purkinje cell protein 4	BC013791|PCP4|5121|Purkinje cell protein 4	X93349|PCP4|5121|Purkinje cell protein 4	AF416716|PCP4|5121|Purkinje cell protein 4	AM183336|PCP4|5121|Purkinje cell protein 4
hg18_v1_chr19_+_44785003_44785047	0.0472576	SOX2.p2	BC066304|LGALS13|29124|lectin, galactoside-binding, soluble, 13	AY055826|LGALS13|29124|lectin, galactoside-binding, soluble, 13	BC069312|LGALS13|29124|lectin, galactoside-binding, soluble, 13	NM_013268|LGALS13|29124|lectin, galactoside-binding, soluble, 13	FJ613336|LGALS13|29124|lectin, galactoside-binding, soluble, 13	FJ613337|LGALS13|29124|lectin, galactoside-binding, soluble, 13	FJ613338|LGALS13|29124|lectin, galactoside-binding, soluble, 13	AF117383|LGALS13|29124|lectin, galactoside-binding, soluble, 13
hg18_v1_chr12_+_63090008_63090082	0.0472504	SOX2.p2	BC020569|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)	Y16414|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)	AF039022|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)
hg18_v1_chr4_-_100703847_100703847	0.0472228	SOX2.p2	BC028373|RG9MTD2|93587|RNA (guanine-9-) methyltransferase domain containing 2	NM_152292|RG9MTD2|93587|RNA (guanine-9-) methyltransferase domain containing 2
hg18_v1_chr12_+_54106304_54106304	0.0472163	SOX2.p2	NM_001005183|OR6C76|390326|olfactory receptor, family 6, subfamily C, member 76
hg18_v1_chr3_+_184453547_184453738	0.0471843	SOX2.p2	NM_032047|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5	AK074424|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
hg18_v1_chr9_-_115101140_115101140	0.0471331	SOX2.p2	BC013036|RNF183|138065|ring finger protein 183	NM_145051|RNF183|138065|ring finger protein 183
hg18_v1_chr12_-_6586811_6586824	0.0471152	SOX2.p2	AK128741|CHD4|1108|chromodomain helicase DNA binding protein 4	NM_001273|CHD4|1108|chromodomain helicase DNA binding protein 4
hg18_v1_chr10_+_35524060_35524123	0.0470824	SOX2.p2	D14826|CREM|1390|cAMP responsive element modulator	NM_182717|CREM|1390|cAMP responsive element modulator	NM_182718|CREM|1390|cAMP responsive element modulator	NM_182719|CREM|1390|cAMP responsive element modulator	NM_182720|CREM|1390|cAMP responsive element modulator	AK290612|CREM|1390|cAMP responsive element modulator	CR601807|CREM|1390|cAMP responsive element modulator	AF069065|CREM|1390|cAMP responsive element modulator	U44836|CREM|1390|cAMP responsive element modulator
hg18_v1_chr6_-_90119158_90119160	0.0470651	SOX2.p2	AK223464|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast)	AK300629|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast)
hg18_v1_chr16_+_21518633_21518678	0.0470548	SOX2.p2	AF151839|METTL9|51108|methyltransferase like 9
hg18_v1_chr11_+_61491793_61492028	0.0470006	SOX2.p2	AK093779|LOC399900|399900|hypothetical LOC399900	BC132894|LOC399900|399900|hypothetical LOC399900	BC132896|LOC399900|399900|hypothetical LOC399900
hg18_v1_chr7_+_44754700_44754715	0.0469797	SOX2.p2	BC110435|ZMIZ2|83637|zinc finger, MIZ-type containing 2
hg18_v1_chr5_+_85949511_85949517	0.046919	SOX2.p2	AK026505|COX7C|1350|cytochrome c oxidase subunit VIIc
hg18_v1_chr16_-_20271530_20271537	0.0467831	SOX2.p2	AK127643|UMOD|7369|uromodulin	AK055722|UMOD|7369|uromodulin	AK091961|UMOD|7369|uromodulin	AK096043|UMOD|7369|uromodulin	M15881|UMOD|7369|uromodulin	BC035975|UMOD|7369|uromodulin	AK127648|UMOD|7369|uromodulin	NM_001008389|UMOD|7369|uromodulin	NM_003361|UMOD|7369|uromodulin
hg18_v1_chr5_-_178984192_178984275	0.0467816	SOX2.p2	AK124530|HNRNPH1|3187|heterogeneous nuclear ribonucleoprotein H1 (H)
hg18_v1_chr12_+_68459015_68459087	0.0467811	SOX2.p2	AK027671|RAB3IP|117177|RAB3A interacting protein (rabin3)	BC015548|RAB3IP|117177|RAB3A interacting protein (rabin3)	NM_001024647|RAB3IP|117177|RAB3A interacting protein (rabin3)	AK027566|RAB3IP|117177|RAB3A interacting protein (rabin3)
hg18_v1_chr8_+_80685894_80685894	0.0467494	SOX2.p2	AK299500|STMN2|11075|stathmin-like 2
hg18_v1_chr5_-_95044415_95044469	0.0467113	SOX2.p2	AY027526|SPATA9|83890|spermatogenesis associated 9	AK292338|SPATA9|83890|spermatogenesis associated 9	AK310260|SPATA9|83890|spermatogenesis associated 9	BC047333|SPATA9|83890|spermatogenesis associated 9	AK093225|SPATA9|83890|spermatogenesis associated 9	BC032832|SPATA9|83890|spermatogenesis associated 9	NM_031952|SPATA9|83890|spermatogenesis associated 9
hg18_v1_chr7_+_129634935_129634953	0.046703	SOX2.p2	BC017587|C7orf45|136263|chromosome 7 open reading frame 45	NM_145268|C7orf45|136263|chromosome 7 open reading frame 45	AK097635|C7orf45|136263|chromosome 7 open reading frame 45
hg18_v1_chr19_+_7608010_7608014	0.0466048	SOX2.p2	BC002869|STXBP2|6813|syntaxin binding protein 2
hg18_v1_chr9_+_130684248_130684299	0.0465762	SOX2.p2	AB037858|LRRC8A|56262|leucine rich repeat containing 8 family, member A	BC051322|LRRC8A|56262|leucine rich repeat containing 8 family, member A
hg18_v1_chrX_-_133758812_133758927	0.0465505	SOX2.p2	BC019221|FAM122B|159090|family with sequence similarity 122B	NM_001166599|FAM122B|159090|family with sequence similarity 122B	AK124650|FAM122B|159090|family with sequence similarity 122B	AK297720|FAM122B|159090|family with sequence similarity 122B	NM_001166600|FAM122B|159090|family with sequence similarity 122B	NM_001170757|FAM122B|159090|family with sequence similarity 122B
hg18_v1_chr1_+_47674275_47674275	0.0464196	SOX2.p2	AF042832|FOXD2|2306|forkhead box D2	NM_004474|FOXD2|2306|forkhead box D2
hg18_v1_chr3_+_38322430_38322486	0.046419	SOX2.p2	AB011082|SLC22A14|9389|solute carrier family 22, member 14	BC126482|SLC22A14|9389|solute carrier family 22, member 14	BC130543|SLC22A14|9389|solute carrier family 22, member 14	BC144079|SLC22A14|9389|solute carrier family 22, member 14	NM_004803|SLC22A14|9389|solute carrier family 22, member 14	BC075070|SLC22A14|9389|solute carrier family 22, member 14	BC075071|SLC22A14|9389|solute carrier family 22, member 14
hg18_v1_chr21_-_33935883_33936029	0.0463978	SOX2.p2	BC033023|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	AK315707|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	AF029689|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	AF098798|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	BC022827|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	BC013155|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	BX647276|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	BX648547|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	AK001293|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	NM_145858|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1
hg18_v1_chr4_-_14612766_14612849	0.0463871	SOX2.p2	
hg18_v1_chr4_+_1842947_1843045	0.0463739	SOX2.p2	BC052254|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1	BC020545|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1	BC032731|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1
hg18_v1_chr17_-_36587965_36587985	0.0463544	SOX2.p2	BC127252|KRTAP4-2|85291|keratin associated protein 4-2	AJ406934|KRTAP4-2|85291|keratin associated protein 4-2	NM_033062|KRTAP4-2|85291|keratin associated protein 4-2
hg18_v1_chr13_+_34948885_34948965	0.0463133	SOX2.p2	AK294737|NBEA|26960|neurobeachin	AK315939|NBEA|26960|neurobeachin
hg18_v1_chr6_-_166960690_166960726	0.0462812	SOX2.p2	BC002363|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2	NM_021135|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2
hg18_v1_chr6_-_79844503_79844573	0.0462762	SOX2.p2	DQ924532|PHIP|55023|pleckstrin homology domain interacting protein	AJ303102|PHIP|55023|pleckstrin homology domain interacting protein
hg18_v1_chr6_-_94185780_94186028	0.0462258	SOX2.p2	BC126125|EPHA7|2045|EPH receptor A7	BC126151|EPHA7|2045|EPH receptor A7	BC143857|EPHA7|2045|EPH receptor A7	BC143858|EPHA7|2045|EPH receptor A7	L36642|EPHA7|2045|EPH receptor A7	BC027940|EPHA7|2045|EPH receptor A7	AK313529|EPHA7|2045|EPH receptor A7	AB209269|EPHA7|2045|EPH receptor A7	NM_004440|EPHA7|2045|EPH receptor A7
hg18_v1_chr22_+_36928011_36928092	0.0461658	SOX2.p2	BC015037|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)	AB025247|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)	CR606348|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)	CR618179|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)
hg18_v1_chr5_+_162862808_162862925	0.0461101	SOX2.p2	DQ395260|MAT2B|27430|methionine adenosyltransferase II, beta	DQ413183|MAT2B|27430|methionine adenosyltransferase II, beta	NM_182796|MAT2B|27430|methionine adenosyltransferase II, beta	AJ243721|MAT2B|27430|methionine adenosyltransferase II, beta	AK291919|MAT2B|27430|methionine adenosyltransferase II, beta	BC005218|MAT2B|27430|methionine adenosyltransferase II, beta	CR622441|MAT2B|27430|methionine adenosyltransferase II, beta	AY358695|MAT2B|27430|methionine adenosyltransferase II, beta	CR596069|MAT2B|27430|methionine adenosyltransferase II, beta
hg18_v1_chr6_+_62341966_62341966	0.0460069	SOX2.p2	NM_001190706|MTRNR2L9|100463487|MT-RNR2-like 9
hg18_v1_chr1_+_15883425_15883637	0.0459111	SOX2.p2	AB020649|PLEKHM2|23207|pleckstrin homology domain containing, family M (with RUN domain) member 2
hg18_v1_chr1_+_191295206_191295216	0.045832	SOX2.p2	CR936683|TROVE2|6738|TROVE domain family, member 2
hg18_v1_chr17_-_34603577_34603661	0.0458316	SOX2.p2	AB209176|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit
hg18_v1_chrX_+_100111352_100111352	0.045762	SOX2.p2	AK301813|ARL13A|392509|ADP-ribosylation factor-like 13A	NM_001012990|ARL13A|392509|ADP-ribosylation factor-like 13A	NM_001162490|ARL13A|392509|ADP-ribosylation factor-like 13A	NM_001162491|ARL13A|392509|ADP-ribosylation factor-like 13A
hg18_v1_chr18_-_51406841_51406859	0.0457595	SOX2.p2	AK122765|TCF4|6925|transcription factor 4	NM_001083962|TCF4|6925|transcription factor 4	NM_003199|TCF4|6925|transcription factor 4
hg18_v1_chr1_+_45565126_45565252	0.0457548	SOX2.p2	CR620904|HPDL|84842|4-hydroxyphenylpyruvate dioxygenase-like	NM_032756|HPDL|84842|4-hydroxyphenylpyruvate dioxygenase-like	CR622386|HPDL|84842|4-hydroxyphenylpyruvate dioxygenase-like	BC007293|HPDL|84842|4-hydroxyphenylpyruvate dioxygenase-like	CR602636|HPDL|84842|4-hydroxyphenylpyruvate dioxygenase-like	CR597681|HPDL|84842|4-hydroxyphenylpyruvate dioxygenase-like
hg18_v1_chr4_+_78297356_78297415	0.0456486	SOX2.p2	NM_004354|CCNG2|901|cyclin G2	AK292029|CCNG2|901|cyclin G2	BC032518|CCNG2|901|cyclin G2
hg18_v1_chr1_+_119712918_119713016	0.0455908	SOX2.p2	AK298289|HAO2|51179|hydroxyacid oxidase 2 (long chain)	NM_001005783|HAO2|51179|hydroxyacid oxidase 2 (long chain)	NM_016527|HAO2|51179|hydroxyacid oxidase 2 (long chain)	BC020863|HAO2|51179|hydroxyacid oxidase 2 (long chain)	AF231917|HAO2|51179|hydroxyacid oxidase 2 (long chain)	AF203975|HAO2|51179|hydroxyacid oxidase 2 (long chain)	AY513277|HAO2|51179|hydroxyacid oxidase 2 (long chain)
hg18_v1_chr20_-_41788975_41789055	0.045584	SOX2.p2	CR613553|GTSF1L|149699|gametocyte specific factor 1-like	BC040049|GTSF1L|149699|gametocyte specific factor 1-like	AK058060|GTSF1L|149699|gametocyte specific factor 1-like	NM_001008901|GTSF1L|149699|gametocyte specific factor 1-like	NM_176791|GTSF1L|149699|gametocyte specific factor 1-like
hg18_v1_chr11_+_186760_186794	0.0455624	SOX2.p2	NM_053280|ODF3|113746|outer dense fiber of sperm tails 3	AY713299|ODF3|113746|outer dense fiber of sperm tails 3	AL133658|ODF3|113746|outer dense fiber of sperm tails 3
hg18_v1_chr5_-_111120929_111121032	0.0455246	SOX2.p2	CR618085|C5orf13|9315|chromosome 5 open reading frame 13	NM_001142482|C5orf13|9315|chromosome 5 open reading frame 13	NM_001142481|C5orf13|9315|chromosome 5 open reading frame 13
hg18_v1_chr14_+_65205750_65205885	0.0454006	SOX2.p2	AF052088|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	BC093889|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	BC101816|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	AJ514324|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	AJ514325|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	NM_178157|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)
hg18_v1_chr3_-_25681394_25681401	0.0453558	SOX2.p2	AK296510|TOP2B|7155|topoisomerase (DNA) II beta 180kDa	AK307450|TOP2B|7155|topoisomerase (DNA) II beta 180kDa
hg18_v1_chr8_+_133948384_133948427	0.0453432	SOX2.p2	AK303666|TG|7038|thyroglobulin	NM_003235|TG|7038|thyroglobulin	X05615|TG|7038|thyroglobulin	BC140933|TG|7038|thyroglobulin	U93033|TG|7038|thyroglobulin	X02154|TG|7038|thyroglobulin
hg18_v1_chr19_-_14030970_14030970	0.0451657	SOX2.p2	NM_001145028|PALM3|342979|paralemmin 3
hg18_v1_chr15_-_74941339_74941339	0.0450507	SOX2.p2	BX647285|SCAPER|49855|S-phase cyclin A-associated protein in the ER	NM_001145923|SCAPER|49855|S-phase cyclin A-associated protein in the ER
hg18_v1_chr14_-_57688560_57688659	0.0448601	SOX2.p2	BC146861|C14orf37|145407|chromosome 14 open reading frame 37	BX161411|C14orf37|145407|chromosome 14 open reading frame 37	NM_001001872|C14orf37|145407|chromosome 14 open reading frame 37	AK292605|C14orf37|145407|chromosome 14 open reading frame 37	BX161448|C14orf37|145407|chromosome 14 open reading frame 37
hg18_v1_chr11_+_4965996_4966015	0.0448594	SOX2.p2	BC101541|MMP26|56547|matrix metallopeptidase 26	BC101543|MMP26|56547|matrix metallopeptidase 26	AF291664|MMP26|56547|matrix metallopeptidase 26	NM_021801|MMP26|56547|matrix metallopeptidase 26	AJ251531|MMP26|56547|matrix metallopeptidase 26	AF230354|MMP26|56547|matrix metallopeptidase 26	AF248646|MMP26|56547|matrix metallopeptidase 26
hg18_v1_chr1_+_199742906_199743063	0.0448116	SOX2.p2	
hg18_v1_chr17_+_7269658_7269683	0.0447731	SOX2.p2	BC031286|C17orf74|201243|chromosome 17 open reading frame 74	BC048010|C17orf74|201243|chromosome 17 open reading frame 74	NM_175734|C17orf74|201243|chromosome 17 open reading frame 74	BC044816|C17orf74|201243|chromosome 17 open reading frame 74
hg18_v1_chr17_-_3248453_3248453	0.0447171	SOX2.p2	NM_003553|OR1E1|8387|olfactory receptor, family 1, subfamily E, member 1
hg18_v1_chr1_-_27802688_27802729	0.0446861	SOX2.p2	NM_001029882|AHDC1|27245|AT hook, DNA binding motif, containing 1
hg18_v1_chr6_+_7053863_7053942	0.0446114	SOX2.p2	BX647723|RREB1|6239|ras responsive element binding protein 1
hg18_v1_chr3_-_25658829_25658855	0.0445812	SOX2.p2	AB208879|TOP2B|7155|topoisomerase (DNA) II beta 180kDa
hg18_v1_chr11_-_70350292_70350362	0.0444896	SOX2.p2	AB208026|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2
hg18_v1_chr12_-_43556424_43556513	0.0444811	SOX2.p2	NM_001145108|NELL2|4753|NEL-like 2 (chicken)	NM_006159|NELL2|4753|NEL-like 2 (chicken)
hg18_v1_chr16_+_55523248_55523248	0.0444458	SOX2.p2	NM_001010989|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	NM_001010990|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	NM_014685|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1
hg18_v1_chr4_+_144654005_144654352	0.0444137	SOX2.p2	NM_003601|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	AK316444|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	AK302841|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	BC023144|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	AB010882|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	AK308424|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5
hg18_v1_chr4_+_158361185_158361484	0.0443076	SOX2.p2	NM_000826|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	NM_001083619|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	NM_001083620|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	BC028736|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	AL832605|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	AB209567|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	BC010574|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	L20814|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2
hg18_v1_chrX_+_24290798_24290798	0.0441498	SOX2.p2	NM_001136234|FAM48B1|100130302|family with sequence similarity 48, member B1
hg18_v1_chr2_-_160180197_160180323	0.044139	SOX2.p2	AK127551|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B	BC107570|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B
hg18_v1_chr17_-_45626967_45627122	0.0440866	SOX2.p2	
hg18_v1_chr11_-_35398077_35398185	0.0440732	SOX2.p2	U01824|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	NM_001195728|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	AK122843|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2
hg18_v1_chr8_+_7789608_7789621	0.0440035	SOX2.p2	BC069285|DEFB4A|1673|defensin, beta 4A	NM_004942|DEFB4A|1673|defensin, beta 4A	BC093985|DEFB4A|1673|defensin, beta 4A	BC093983|DEFB4A|1673|defensin, beta 4A	Z71389|DEFB4A|1673|defensin, beta 4A
hg18_v1_chr4_-_138673014_138673070	0.0439496	SOX2.p2	AK297122|PCDH18|54510|protocadherin 18	BC022227|PCDH18|54510|protocadherin 18
hg18_v1_chr8_-_17315171_17315230	0.0437585	SOX2.p2	AK294468|MTMR7|9108|myotubularin related protein 7	BC130577|MTMR7|9108|myotubularin related protein 7	BC130579|MTMR7|9108|myotubularin related protein 7	CR749240|MTMR7|9108|myotubularin related protein 7	AK316022|MTMR7|9108|myotubularin related protein 7	AK316283|MTMR7|9108|myotubularin related protein 7
hg18_v1_chr5_+_169713458_169713458	0.0437297	SOX2.p2	DQ148476|KCNIP1|30820|Kv channel interacting protein 1	NM_001034838|KCNIP1|30820|Kv channel interacting protein 1
hg18_v1_chr15_-_88143721_88143789	0.0437116	SOX2.p2	CR595462|ANPEP|290|alanyl (membrane) aminopeptidase
hg18_v1_chr11_-_95715976_95716126	0.0437103	SOX2.p2	AB058722|MAML2|84441|mastermind-like 2 (Drosophila)	AY040322|MAML2|84441|mastermind-like 2 (Drosophila)	BC152449|MAML2|84441|mastermind-like 2 (Drosophila)	NM_032427|MAML2|84441|mastermind-like 2 (Drosophila)	AK308157|MAML2|84441|mastermind-like 2 (Drosophila)
hg18_v1_chr3_+_14835472_14835472	0.0436214	SOX2.p2	NM_152536|FGD5|152273|FYVE, RhoGEF and PH domain containing 5
hg18_v1_chr3_+_66094324_66094324	0.0436173	SOX2.p2	AK092495|SLC25A26|115286|solute carrier family 25, member 26	AX747571|SLC25A26|115286|solute carrier family 25, member 26	NM_173471|SLC25A26|115286|solute carrier family 25, member 26
hg18_v1_chr1_+_161305558_161305898	0.0436128	SOX2.p2	DQ346663|RGS4|5999|regulator of G-protein signaling 4	NM_001113381|RGS4|5999|regulator of G-protein signaling 4	AK093959|RGS4|5999|regulator of G-protein signaling 4	AK300832|RGS4|5999|regulator of G-protein signaling 4	DQ346662|RGS4|5999|regulator of G-protein signaling 4	AK312250|RGS4|5999|regulator of G-protein signaling 4	AK096204|RGS4|5999|regulator of G-protein signaling 4	BC051869|RGS4|5999|regulator of G-protein signaling 4	U27768|RGS4|5999|regulator of G-protein signaling 4	BC000737|RGS4|5999|regulator of G-protein signaling 4	AF493928|RGS4|5999|regulator of G-protein signaling 4	BT007025|RGS4|5999|regulator of G-protein signaling 4
hg18_v1_chr17_-_60088637_60088652	0.0435622	SOX2.p2	AY014180|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2
hg18_v1_chr8_+_42315132_42315299	0.0434576	SOX2.p2	AK223537|POLB|5423|polymerase (DNA directed), beta	BC100288|POLB|5423|polymerase (DNA directed), beta	AK294025|POLB|5423|polymerase (DNA directed), beta	AK314976|POLB|5423|polymerase (DNA directed), beta	CR624336|POLB|5423|polymerase (DNA directed), beta	CR623008|POLB|5423|polymerase (DNA directed), beta	D29013|POLB|5423|polymerase (DNA directed), beta	M13140|POLB|5423|polymerase (DNA directed), beta	NM_002690|POLB|5423|polymerase (DNA directed), beta	BC106909|POLB|5423|polymerase (DNA directed), beta	CR536503|POLB|5423|polymerase (DNA directed), beta	CR541802|POLB|5423|polymerase (DNA directed), beta	L11607|POLB|5423|polymerase (DNA directed), beta
hg18_v1_chr21_+_25856311_25856375	0.0433346	SOX2.p2	AF402776|MIR155HG|114614|MIR155 host gene (non-protein coding)
hg18_v1_chrX_+_1693940_1694067	0.0432728	SOX2.p2	AK314922|ASMT|438|acetylserotonin O-methyltransferase	NM_001171038|ASMT|438|acetylserotonin O-methyltransferase	U11091|ASMT|438|acetylserotonin O-methyltransferase	M83779|ASMT|438|acetylserotonin O-methyltransferase	NM_001171039|ASMT|438|acetylserotonin O-methyltransferase	BC001620|ASMT|438|acetylserotonin O-methyltransferase
hg18_v1_chr6_+_43846155_43846296	0.0432156	SOX2.p2	AF022375|VEGFA|7422|vascular endothelial growth factor A
hg18_v1_chr3_+_9748769_9748804	0.0431593	SOX2.p2	M91585|BRPF1|7862|bromodomain and PHD finger containing, 1
hg18_v1_chr20_-_43609409_43609478	0.0431544	SOX2.p2	AK126022|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)	AF286368|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)	AF286370|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)	AL118493|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)	BC053369|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)	BC044829|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)	AK301937|SPINLW1-WFDC6|100526773|SPINLW1-WFDC6 readthrough	BC003675|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)	AK311906|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)	NM_001198986|SPINLW1-WFDC6|100526773|SPINLW1-WFDC6 readthrough	NM_020398|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)
hg18_v1_chrX_+_52797004_52797070	0.0431322	SOX2.p2	BC103863|SSX2|6757|synovial sarcoma, X breakpoint 2	NM_001164417|SSX2B|727837|synovial sarcoma, X breakpoint 2B	NM_003147|SSX2|6757|synovial sarcoma, X breakpoint 2	NM_175698|SSX2|6757|synovial sarcoma, X breakpoint 2	Z49105|SSX2|6757|synovial sarcoma, X breakpoint 2	X86175|SSX2|6757|synovial sarcoma, X breakpoint 2	BC002818|SSX2|6757|synovial sarcoma, X breakpoint 2	BC007343|SSX2|6757|synovial sarcoma, X breakpoint 2	BC016957|SSX2|6757|synovial sarcoma, X breakpoint 2	BC071827|SSX2|6757|synovial sarcoma, X breakpoint 2
hg18_v1_chr11_-_46572160_46572199	0.0431276	SOX2.p2	AK304530|AMBRA1|55626|autophagy/beclin-1 regulator 1
hg18_v1_chr6_+_144227265_144227265	0.043105	SOX2.p2	BC146950|C6orf94|153918|chromosome 6 open reading frame 94	BC146969|C6orf94|153918|chromosome 6 open reading frame 94	BC171862|C6orf94|153918|chromosome 6 open reading frame 94	NM_001013623|C6orf94|153918|chromosome 6 open reading frame 94
hg18_v1_chr6_+_31891293_31891339	0.0430517	SOX2.p2	AK096017|HSPA1A|3303|heat shock 70kDa protein 1A	AK225692|HSPA1A|3303|heat shock 70kDa protein 1A	AK225699|HSPA1A|3303|heat shock 70kDa protein 1A	AK291295|HSPA1A|3303|heat shock 70kDa protein 1A	AK294182|HSPA1A|3303|heat shock 70kDa protein 1A	AK298056|HSPA1A|3303|heat shock 70kDa protein 1A	AK301574|HSPA1A|3303|heat shock 70kDa protein 1A	AK303980|HSPA1A|3303|heat shock 70kDa protein 1A	AK304618|HSPA1A|3303|heat shock 70kDa protein 1A	AK304652|HSPA1A|3303|heat shock 70kDa protein 1A	AK301243|HSPA1A|3303|heat shock 70kDa protein 1A	AB209818|HSPA1A|3303|heat shock 70kDa protein 1A	CR620700|HSPA1A|3303|heat shock 70kDa protein 1A	CR591386|HSPA1A|3303|heat shock 70kDa protein 1A	CR609187|HSPA1A|3303|heat shock 70kDa protein 1A	CR593858|HSPA1A|3303|heat shock 70kDa protein 1A	CR606370|HSPA1A|3303|heat shock 70kDa protein 1A	CR609094|HSPA1A|3303|heat shock 70kDa protein 1A	CR610055|HSPA1A|3303|heat shock 70kDa protein 1A	BC002453|HSPA1A|3303|heat shock 70kDa protein 1A	CR605852|HSPA1A|3303|heat shock 70kDa protein 1A
hg18_v1_chr9_+_130684601_130684601	0.0430329	SOX2.p2	AK289842|LRRC8A|56262|leucine rich repeat containing 8 family, member A	NM_001127244|LRRC8A|56262|leucine rich repeat containing 8 family, member A
hg18_v1_chr14_+_56927014_56927058	0.0429451	SOX2.p2	AK296372|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit	AK092674|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit	NM_001011713|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit	AK304257|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit	AK307348|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit
hg18_v1_chr10_-_14856901_14856901	0.0428289	SOX2.p2	AK127413|FAM107B|83641|family with sequence similarity 107, member B	NM_031453|FAM107B|83641|family with sequence similarity 107, member B
hg18_v1_chr5_+_140790141_140790268	0.0427946	SOX2.p2	AY358946|PCDHGA12|26025|protocadherin gamma subfamily A, 12
hg18_v1_chr2_+_102744921_102744973	0.0427234	SOX2.p2	CR936735|TMEM182|130827|transmembrane protein 182	NM_144632|TMEM182|130827|transmembrane protein 182	CR936731|TMEM182|130827|transmembrane protein 182	CR936732|TMEM182|130827|transmembrane protein 182	AK129862|TMEM182|130827|transmembrane protein 182	BC130306|TMEM182|130827|transmembrane protein 182	BC130308|TMEM182|130827|transmembrane protein 182
hg18_v1_chr1_+_154318954_154319041	0.0426953	SOX2.p2	AK056143|LMNA|4000|lamin A/C
hg18_v1_chr7_+_127015650_127015827	0.0424949	SOX2.p2	CR592093|ARF5|381|ADP-ribosylation factor 5	CR624513|ARF5|381|ADP-ribosylation factor 5	AK307297|ARF5|381|ADP-ribosylation factor 5	CR598890|ARF5|381|ADP-ribosylation factor 5	CR619680|ARF5|381|ADP-ribosylation factor 5	AK308548|ARF5|381|ADP-ribosylation factor 5	BC033104|ARF5|381|ADP-ribosylation factor 5	CR610040|ARF5|381|ADP-ribosylation factor 5	CR619021|ARF5|381|ADP-ribosylation factor 5	CR625498|ARF5|381|ADP-ribosylation factor 5	CR624558|ARF5|381|ADP-ribosylation factor 5	CR618126|ARF5|381|ADP-ribosylation factor 5	M57567|ARF5|381|ADP-ribosylation factor 5	AK297026|ARF5|381|ADP-ribosylation factor 5	AK312107|ARF5|381|ADP-ribosylation factor 5	CR619769|ARF5|381|ADP-ribosylation factor 5	BC003043|ARF5|381|ADP-ribosylation factor 5	NM_001662|ARF5|381|ADP-ribosylation factor 5	AF493884|ARF5|381|ADP-ribosylation factor 5	BT007087|ARF5|381|ADP-ribosylation factor 5	CR614865|ARF5|381|ADP-ribosylation factor 5
hg18_v1_chr12_-_106679054_106679209	0.0424417	SOX2.p2	BC068562|PRDM4|11108|PR domain containing 4
hg18_v1_chrX_+_41191630_41191656	0.0424376	SOX2.p2	AJ278865|NYX|60506|nyctalopin	AF254868|NYX|60506|nyctalopin	NM_022567|NYX|60506|nyctalopin
hg18_v1_chr4_+_53975597_53975627	0.0423387	SOX2.p2	CR606214|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg18_v1_chr5_+_67622242_67622383	0.042297	SOX2.p2	AK223613|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	BC030815|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	NM_181504|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	U49349|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	AK126345|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
hg18_v1_chr11_+_57285809_57286021	0.0422241	SOX2.p2	NM_001085458|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085459|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085460|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085461|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085462|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085463|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085464|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085465|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085466|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085467|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085468|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085469|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001331|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062317|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062318|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062319|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062320|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062321|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062322|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062323|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062324|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062325|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062326|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062327|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062328|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062329|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062330|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062331|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062332|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062333|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062334|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062335|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062336|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062337|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062338|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062339|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062340|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062341|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062342|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062343|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062344|CTNND1|1500|catenin (cadherin-associated protein), delta 1	BC075795|CTNND1|1500|catenin (cadherin-associated protein), delta 1
hg18_v1_chr7_+_123083096_123083251	0.0421745	SOX2.p2	NM_207163|LMOD2|442721|leiomodin 2 (cardiac)	AK299434|LMOD2|442721|leiomodin 2 (cardiac)	AK299389|LMOD2|442721|leiomodin 2 (cardiac)	AK300698|LMOD2|442721|leiomodin 2 (cardiac)	BC017911|LMOD2|442721|leiomodin 2 (cardiac)	BC062765|LMOD2|442721|leiomodin 2 (cardiac)
hg18_v1_chr3_-_15814678_15814694	0.0421673	SOX2.p2	AK293770|ANKRD28|23243|ankyrin repeat domain 28	NM_001195098|ANKRD28|23243|ankyrin repeat domain 28
hg18_v1_chr11_+_5466490_5466490	0.0421388	SOX2.p2	BC136928|OR52D1|390066|olfactory receptor, family 52, subfamily D, member 1	BC136930|OR52D1|390066|olfactory receptor, family 52, subfamily D, member 1	NM_001005163|OR52D1|390066|olfactory receptor, family 52, subfamily D, member 1
hg18_v1_chr6_+_88021644_88021755	0.0421295	SOX2.p2	AL832366|ZNF292|23036|zinc finger protein 292
hg18_v1_chr7_+_38984133_38984133	0.042108	SOX2.p2	NM_001166018|POU6F2|11281|POU class 6 homeobox 2	NM_007252|POU6F2|11281|POU class 6 homeobox 2
hg18_v1_chr5_+_180258682_180258879	0.0420858	SOX2.p2	NM_001040462|BTNL8|79908|butyrophilin-like 8	NM_001159707|BTNL8|79908|butyrophilin-like 8	NM_001159708|BTNL8|79908|butyrophilin-like 8	NM_001159709|BTNL8|79908|butyrophilin-like 8	NM_024850|BTNL8|79908|butyrophilin-like 8	AK296597|BTNL8|79908|butyrophilin-like 8	AY358523|BTNL8|79908|butyrophilin-like 8	AK025111|BTNL8|79908|butyrophilin-like 8	AK225213|BTNL8|79908|butyrophilin-like 8	BC119696|BTNL8|79908|butyrophilin-like 8	BC119697|BTNL8|79908|butyrophilin-like 8
hg18_v1_chr4_+_144654526_144654603	0.0420748	SOX2.p2	
hg18_v1_chr8_-_102872614_102872614	0.0420596	SOX2.p2	NM_032041|NCALD|83988|neurocalcin delta
hg18_v1_chr8_-_71146022_71146028	0.0420524	SOX2.p2	BC052311|PRDM14|63978|PR domain containing 14
hg18_v1_chr6_+_4721825_4722015	0.0420223	SOX2.p2	BC119682|CDYL|9425|chromodomain protein, Y-like
hg18_v1_chr18_+_3584056_3584228	0.0420157	SOX2.p2	AK093095|FLJ35776|649446|hypothetical LOC649446	BC137437|FLJ35776|649446|hypothetical LOC649446
hg18_v1_chr6_-_53517466_53517487	0.0419655	SOX2.p2	BC039894|GCLC|2729|glutamate-cysteine ligase, catalytic subunit	M90656|GCLC|2729|glutamate-cysteine ligase, catalytic subunit
hg18_v1_chr10_-_13430195_13430351	0.0419395	SOX2.p2	CR590975|SEPHS1|22929|selenophosphate synthetase 1	U34044|SEPHS1|22929|selenophosphate synthetase 1	BC063816|SEPHS1|22929|selenophosphate synthetase 1	CR610247|SEPHS1|22929|selenophosphate synthetase 1	GU954545|SEPHS1|22929|selenophosphate synthetase 1	GU954546|SEPHS1|22929|selenophosphate synthetase 1	GU954547|SEPHS1|22929|selenophosphate synthetase 1	GU954548|SEPHS1|22929|selenophosphate synthetase 1	GU954549|SEPHS1|22929|selenophosphate synthetase 1	CR598779|SEPHS1|22929|selenophosphate synthetase 1	NM_001195602|SEPHS1|22929|selenophosphate synthetase 1	NM_001195604|SEPHS1|22929|selenophosphate synthetase 1	NM_012247|SEPHS1|22929|selenophosphate synthetase 1
hg18_v1_chr12_-_43556220_43556268	0.041839	SOX2.p2	BC020544|NELL2|4753|NEL-like 2 (chicken)
hg18_v1_chr19_+_54883732_54883753	0.0417808	SOX2.p2	BC032764|C19orf76|199800|chromosome 19 open reading frame 76	NM_001101340|C19orf76|199800|chromosome 19 open reading frame 76
hg18_v1_chr10_-_90702490_90702559	0.0416532	SOX2.p2	J05192|ACTA2|59|actin, alpha 2, smooth muscle, aorta	X13839|ACTA2|59|actin, alpha 2, smooth muscle, aorta	CR619420|ACTA2|59|actin, alpha 2, smooth muscle, aorta	BC017554|ACTA2|59|actin, alpha 2, smooth muscle, aorta	CR597033|ACTA2|59|actin, alpha 2, smooth muscle, aorta	CR621459|ACTA2|59|actin, alpha 2, smooth muscle, aorta	BC093052|ACTA2|59|actin, alpha 2, smooth muscle, aorta	AK300664|ACTA2|59|actin, alpha 2, smooth muscle, aorta	AK313294|ACTA2|59|actin, alpha 2, smooth muscle, aorta	NM_001613|ACTA2|59|actin, alpha 2, smooth muscle, aorta
hg18_v1_chr19_-_60383280_60383531	0.0415671	SOX2.p2	AK125182|SYT5|6861|synaptotagmin V	AK313067|SYT5|6861|synaptotagmin V	BC033683|SYT5|6861|synaptotagmin V	BC046157|SYT5|6861|synaptotagmin V	BC029962|SYT5|6861|synaptotagmin V	NM_003180|SYT5|6861|synaptotagmin V
hg18_v1_chrX_+_16578201_16578235	0.0414543	SOX2.p2	L13220|S100G|795|S100 calcium binding protein G	NM_004057|S100G|795|S100 calcium binding protein G	X65869|S100G|795|S100 calcium binding protein G	BC112174|S100G|795|S100 calcium binding protein G
hg18_v1_chr10_-_17211795_17211884	0.04145	SOX2.p2	AF034611|CUBN|8029|cubilin (intrinsic factor-cobalamin receptor)	NM_001081|CUBN|8029|cubilin (intrinsic factor-cobalamin receptor)
hg18_v1_chr19_+_7608015_7608017	0.0414258	SOX2.p2	CR611137|STXBP2|6813|syntaxin binding protein 2	CR597245|STXBP2|6813|syntaxin binding protein 2	CR613567|STXBP2|6813|syntaxin binding protein 2	CR625756|STXBP2|6813|syntaxin binding protein 2	CR626453|STXBP2|6813|syntaxin binding protein 2
hg18_v1_chr6_+_57062848_57062883	0.0414218	SOX2.p2	BC021712|ZNF451|26036|zinc finger protein 451
hg18_v1_chr10_-_11693535_11693750	0.0413335	SOX2.p2	AK292944|USP6NL|9712|USP6 N-terminal like	BC042943|USP6NL|9712|USP6 N-terminal like	D13644|USP6NL|9712|USP6 N-terminal like	BC010351|USP6NL|9712|USP6 N-terminal like	NM_014688|USP6NL|9712|USP6 N-terminal like
hg18_v1_chr2_-_232034638_232034709	0.0413059	SOX2.p2	AK001314|NCL|4691|nucleolin
hg18_v1_chr6_-_79844618_79844656	0.0413042	SOX2.p2	BC021905|PHIP|55023|pleckstrin homology domain interacting protein
hg18_v1_chr3_-_61703850_61703852	0.0412964	SOX2.p2	
hg18_v1_chr5_+_43638495_43638698	0.0412761	SOX2.p2	AK297558|NNT|23530|nicotinamide nucleotide transhydrogenase	NM_012343|NNT|23530|nicotinamide nucleotide transhydrogenase	AL831822|NNT|23530|nicotinamide nucleotide transhydrogenase	BC064402|NNT|23530|nicotinamide nucleotide transhydrogenase
hg18_v1_chr19_+_10625987_10626105	0.0412465	SOX2.p2	U10324|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	BC048314|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	BC064836|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	AK293170|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	AK291205|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	AK294084|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	X98264|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	AK291617|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	BC001770|ILF3|3609|interleukin enhancer binding factor 3, 90kDa
hg18_v1_chr15_-_41698251_41698289	0.0410986	SOX2.p2	AK308370|STRC|161497|stereocilin	BC129931|STRC|161497|stereocilin	BC129932|STRC|161497|stereocilin	NM_153700|STRC|161497|stereocilin
hg18_v1_chr16_+_57091546_57091653	0.0410539	SOX2.p2	AK055038|NDRG4|65009|NDRG family member 4	AB044944|NDRG4|65009|NDRG family member 4	AB044945|NDRG4|65009|NDRG family member 4	AK131248|NDRG4|65009|NDRG family member 4	AK296415|NDRG4|65009|NDRG family member 4	AK299949|NDRG4|65009|NDRG family member 4	AK316089|NDRG4|65009|NDRG family member 4	BC011795|NDRG4|65009|NDRG family member 4	CR590492|NDRG4|65009|NDRG family member 4	AB033006|NDRG4|65009|NDRG family member 4	AL136584|NDRG4|65009|NDRG family member 4	BC001527|NDRG4|65009|NDRG family member 4	AM393094|NDRG4|65009|NDRG family member 4	AM393323|NDRG4|65009|NDRG family member 4
hg18_v1_chr4_+_71298187_71298281	0.0410073	SOX2.p2	NM_021225|PROL1|58503|proline rich, lacrimal 1	BC092438|PROL1|58503|proline rich, lacrimal 1	S83198|PROL1|58503|proline rich, lacrimal 1
hg18_v1_chr1_-_174442999_174443000	0.040981	SOX2.p2	AF527539|RFWD2|64326|ring finger and WD repeat domain 2
hg18_v1_chr9_+_96807107_96807126	0.0409588	SOX2.p2	CR626738|C9orf3|84909|chromosome 9 open reading frame 3
hg18_v1_chr6_-_79844606_79844609	0.0408826	SOX2.p2	BC137488|PHIP|55023|pleckstrin homology domain interacting protein	BC144670|PHIP|55023|pleckstrin homology domain interacting protein
hg18_v1_chr11_-_5279750_5279751	0.0408799	SOX2.p2	BC100919|OR51B4|79339|olfactory receptor, family 51, subfamily B, member 4	BC069094|OR51B4|79339|olfactory receptor, family 51, subfamily B, member 4	BC148186|OR51B4|79339|olfactory receptor, family 51, subfamily B, member 4	BC153815|OR51B4|79339|olfactory receptor, family 51, subfamily B, member 4	NM_033179|OR51B4|79339|olfactory receptor, family 51, subfamily B, member 4
hg18_v1_chr8_+_80685859_80685868	0.0408775	SOX2.p2	D50375|STMN2|11075|stathmin-like 2
hg18_v1_chr5_+_178300799_178300843	0.040744	SOX2.p2	NM_001178089|ZNF454|285676|zinc finger protein 454	NM_001178090|ZNF454|285676|zinc finger protein 454	NM_182594|ZNF454|285676|zinc finger protein 454	AK094763|ZNF454|285676|zinc finger protein 454	AK292317|ZNF454|285676|zinc finger protein 454
hg18_v1_chr21_+_44002290_44002434	0.0406698	SOX2.p2	AL110184|PDXK|8566|pyridoxal (pyridoxine, vitamin B6) kinase
hg18_v1_chr14_-_59264044_59264183	0.0406092	SOX2.p2	DQ355431|RTN1|6252|reticulon 1	L10334|RTN1|6252|reticulon 1	NM_206857|RTN1|6252|reticulon 1
hg18_v1_chr21_+_29322100_29322128	0.0405562	SOX2.p2	DQ892395|USP16|10600|ubiquitin specific peptidase 16	DQ895610|USP16|10600|ubiquitin specific peptidase 16
hg18_v1_chr10_+_90474280_90474280	0.0405355	SOX2.p2	EF426482|LIPK|643414|lipase, family member K	NM_001080518|LIPK|643414|lipase, family member K
hg18_v1_chr5_+_14493905_14493927	0.0403966	SOX2.p2	CR620371|TRIO|7204|triple functional domain (PTPRF interacting)
hg18_v1_chr11_+_111552298_111552332	0.0403703	SOX2.p2	NM_001037290|BCO2|83875|beta-carotene oxygenase 2	AK027801|BCO2|83875|beta-carotene oxygenase 2	AK297853|BCO2|83875|beta-carotene oxygenase 2	AB096252|BCO2|83875|beta-carotene oxygenase 2
hg18_v1_chr12_-_109424260_109424327	0.0403062	SOX2.p2	BC015095|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	AF201946|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	AF175264|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	CR612363|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	BC000880|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	AF168716|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	AF193795|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	AK129767|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	BC017964|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	AL136614|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	BC095446|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	NM_016226|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	NM_057180|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	CR594493|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	BC032462|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)
hg18_v1_chr13_-_71338144_71338376	0.0403042	SOX2.p2	AK001000|DACH1|1602|dachshund homolog 1 (Drosophila)	BC021219|DACH1|1602|dachshund homolog 1 (Drosophila)	AF069509|DACH1|1602|dachshund homolog 1 (Drosophila)
hg18_v1_chr5_-_16795336_16795338	0.0402973	SOX2.p2	AK316138|MYO10|4651|myosin X
hg18_v1_chr15_+_63701322_63701322	0.0402882	SOX2.p2	AF062922|SLC24A1|9187|solute carrier family 24 (sodium/potassium/calcium exchanger), member 1	NM_004727|SLC24A1|9187|solute carrier family 24 (sodium/potassium/calcium exchanger), member 1
hg18_v1_chr21_-_35153664_35153748	0.0402824	SOX2.p2	S76350|RUNX1|861|runt-related transcription factor 1
hg18_v1_chr2_-_234317362_234317399	0.0402595	SOX2.p2	BC024013|DNAJB3|414061|DnaJ (Hsp40) homolog, subfamily B, member 3	AY083665|DNAJB3|414061|DnaJ (Hsp40) homolog, subfamily B, member 3	BC017590|DNAJB3|414061|DnaJ (Hsp40) homolog, subfamily B, member 3	NM_001001394|DNAJB3|414061|DnaJ (Hsp40) homolog, subfamily B, member 3
hg18_v1_chr1_-_241485298_241485330	0.0400784	SOX2.p2	NM_001042404|CEP170|9859|centrosomal protein 170kDa	NM_001042405|CEP170|9859|centrosomal protein 170kDa	NM_014812|CEP170|9859|centrosomal protein 170kDa
hg18_v1_chr1_-_203985752_203985779	0.040076	SOX2.p2	AY823399|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1
hg18_v1_chr10_-_127361583_127361702	0.0400569	SOX2.p2	BC127766|C10orf122|387718|chromosome 10 open reading frame 122	BC127767|C10orf122|387718|chromosome 10 open reading frame 122	CR611441|C10orf122|387718|chromosome 10 open reading frame 122	AK131010|C10orf122|387718|chromosome 10 open reading frame 122	BC062717|C10orf122|387718|chromosome 10 open reading frame 122	NM_001128202|C10orf122|387718|chromosome 10 open reading frame 122
hg18_v1_chrX_-_119487164_119487182	0.0400468	SOX2.p2	CR606114|LAMP2|3920|lysosomal-associated membrane protein 2	AK291090|LAMP2|3920|lysosomal-associated membrane protein 2	AK293931|LAMP2|3920|lysosomal-associated membrane protein 2
hg18_v1_chr3_-_113842237_113842248	0.0400001	SOX2.p2	BC086876|CCDC80|151887|coiled-coil domain containing 80
hg18_v1_chr21_-_34209897_34210027	0.0399499	SOX2.p2	BT019836|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	CR456822|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	BC021233|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	AK124187|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	AK222962|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	AK311796|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	BC022865|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	X83218|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	AK222608|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	NM_001697|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit
hg18_v1_chrX_-_100490329_100490405	0.0399325	SOX2.p2	U66035|TIMM8A|1678|translocase of inner mitochondrial membrane 8 homolog A (yeast)	BC070284|TIMM8A|1678|translocase of inner mitochondrial membrane 8 homolog A (yeast)	AK312117|TIMM8A|1678|translocase of inner mitochondrial membrane 8 homolog A (yeast)	BC005236|TIMM8A|1678|translocase of inner mitochondrial membrane 8 homolog A (yeast)	BC006994|TIMM8A|1678|translocase of inner mitochondrial membrane 8 homolog A (yeast)	BC015093|TIMM8A|1678|translocase of inner mitochondrial membrane 8 homolog A (yeast)	NM_001145951|TIMM8A|1678|translocase of inner mitochondrial membrane 8 homolog A (yeast)
hg18_v1_chr11_+_66034652_66034733	0.0398562	SOX2.p2	AK095638|BBS1|582|Bardet-Biedl syndrome 1	BX647612|BBS1|582|Bardet-Biedl syndrome 1	AK294962|BBS1|582|Bardet-Biedl syndrome 1	AK302657|BBS1|582|Bardet-Biedl syndrome 1	AK296311|BBS1|582|Bardet-Biedl syndrome 1	BC047642|BBS1|582|Bardet-Biedl syndrome 1	AF503941|BBS1|582|Bardet-Biedl syndrome 1	NM_024649|BBS1|582|Bardet-Biedl syndrome 1	CR625482|BBS1|582|Bardet-Biedl syndrome 1	BC109064|BBS1|582|Bardet-Biedl syndrome 1	BC109065|BBS1|582|Bardet-Biedl syndrome 1
hg18_v1_chr18_-_72857665_72857824	0.0398393	SOX2.p2	AK074315|MBP|4155|myelin basic protein	CR598393|MBP|4155|myelin basic protein
hg18_v1_chr18_+_41448763_41448763	0.0396895	SOX2.p2	AF349446|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2	NM_007163|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2
hg18_v1_chr2_+_228064531_228064539	0.0396703	SOX2.p2	AK295030|AGFG1|3267|ArfGAP with FG repeats 1
hg18_v1_chr2_+_105799354_105799461	0.0396449	SOX2.p2	AF047487|NCK2|8440|NCK adaptor protein 2	BC007195|NCK2|8440|NCK adaptor protein 2
hg18_v1_chrX_+_69404879_69404926	0.039626	SOX2.p2	BC012096|ARR3|407|arrestin 3, retinal (X-arrestin)	NM_004312|ARR3|407|arrestin 3, retinal (X-arrestin)	AF033105|ARR3|407|arrestin 3, retinal (X-arrestin)
hg18_v1_chrX_+_27736027_27736045	0.0394917	SOX2.p2	AK057527|MAGEB10|139422|melanoma antigen family B, 10	NM_182506|MAGEB10|139422|melanoma antigen family B, 10	BC101307|MAGEB10|139422|melanoma antigen family B, 10	BC101309|MAGEB10|139422|melanoma antigen family B, 10	BC101310|MAGEB10|139422|melanoma antigen family B, 10
hg18_v1_chr15_+_89248423_89248423	0.0394914	SOX2.p2	BC136448|MAN2A2|4122|mannosidase, alpha, class 2A, member 2	BC144111|MAN2A2|4122|mannosidase, alpha, class 2A, member 2	NM_006122|MAN2A2|4122|mannosidase, alpha, class 2A, member 2
hg18_v1_chr7_-_66097838_66098033	0.0394589	SOX2.p2	CR597378|SBDS|51119|Shwachman-Bodian-Diamond syndrome	CR606624|SBDS|51119|Shwachman-Bodian-Diamond syndrome	CR622210|SBDS|51119|Shwachman-Bodian-Diamond syndrome	CR601377|SBDS|51119|Shwachman-Bodian-Diamond syndrome	CR610261|SBDS|51119|Shwachman-Bodian-Diamond syndrome	CR622442|SBDS|51119|Shwachman-Bodian-Diamond syndrome	BC065700|SBDS|51119|Shwachman-Bodian-Diamond syndrome	CR591576|SBDS|51119|Shwachman-Bodian-Diamond syndrome	CR604577|SBDS|51119|Shwachman-Bodian-Diamond syndrome	CR612387|SBDS|51119|Shwachman-Bodian-Diamond syndrome	CR601234|SBDS|51119|Shwachman-Bodian-Diamond syndrome	CR613995|SBDS|51119|Shwachman-Bodian-Diamond syndrome	AF151855|SBDS|51119|Shwachman-Bodian-Diamond syndrome	CR596032|SBDS|51119|Shwachman-Bodian-Diamond syndrome	CR626007|SBDS|51119|Shwachman-Bodian-Diamond syndrome	AK001779|SBDS|51119|Shwachman-Bodian-Diamond syndrome	AY169963|SBDS|51119|Shwachman-Bodian-Diamond syndrome	NM_016038|SBDS|51119|Shwachman-Bodian-Diamond syndrome	AK289609|SBDS|51119|Shwachman-Bodian-Diamond syndrome
hg18_v1_chr15_-_99276933_99277061	0.0394544	SOX2.p2	
hg18_v1_chr7_-_141187689_141187753	0.0394338	SOX2.p2	AK172866|PRSS37|136242|protease, serine, 37	NM_001008270|PRSS37|136242|protease, serine, 37	NM_001171951|PRSS37|136242|protease, serine, 37	AK097648|PRSS37|136242|protease, serine, 37
hg18_v1_chr3_-_47798279_47798307	0.0393626	SOX2.p2	EU832157|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	EU832251|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
hg18_v1_chr5_+_140573692_140573721	0.0393405	SOX2.p2	AK021915|PCDHB13|56123|protocadherin beta 13	NM_018933|PCDHB13|56123|protocadherin beta 13	AY358427|PCDHB13|56123|protocadherin beta 13	AK296151|PCDHB13|56123|protocadherin beta 13	AK292821|PCDHB13|56123|protocadherin beta 13	BC033068|PCDHB13|56123|protocadherin beta 13	BC051348|PCDHB13|56123|protocadherin beta 13	BC071934|PCDHB13|56123|protocadherin beta 13
hg18_v1_chr17_+_22982372_22982378	0.0392446	SOX2.p2	BC105942|LGALS9|3965|lectin, galactoside-binding, soluble, 9	BC105944|LGALS9|3965|lectin, galactoside-binding, soluble, 9	CR616420|LGALS9|3965|lectin, galactoside-binding, soluble, 9
hg18_v1_chr5_-_95184121_95184197	0.0392302	SOX2.p2	AF162769|GLRX|2745|glutaredoxin (thioltransferase)	BT006689|GLRX|2745|glutaredoxin (thioltransferase)	CR450312|GLRX|2745|glutaredoxin (thioltransferase)	CR542165|GLRX|2745|glutaredoxin (thioltransferase)	DQ892497|GLRX|2745|glutaredoxin (thioltransferase)	DQ895709|GLRX|2745|glutaredoxin (thioltransferase)	D21238|GLRX|2745|glutaredoxin (thioltransferase)	AF069668|GLRX|2745|glutaredoxin (thioltransferase)	CR618562|GLRX|2745|glutaredoxin (thioltransferase)	BC106075|GLRX|2745|glutaredoxin (thioltransferase)	X76648|GLRX|2745|glutaredoxin (thioltransferase)	AK311868|GLRX|2745|glutaredoxin (thioltransferase)	BC005304|GLRX|2745|glutaredoxin (thioltransferase)	BC010965|GLRX|2745|glutaredoxin (thioltransferase)	CR611519|GLRX|2745|glutaredoxin (thioltransferase)
hg18_v1_chr3_-_14963980_14964102	0.0391847	SOX2.p2	
hg18_v1_chr6_-_90119068_90119156	0.0390388	SOX2.p2	AJ245898|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast)	AF151834|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast)
hg18_v1_chr5_+_140790365_140790389	0.0390338	SOX2.p2	AB011160|PCDHGA12|26025|protocadherin gamma subfamily A, 12
hg18_v1_chr8_+_144838608_144838649	0.0389364	SOX2.p2	NM_001100598|ZNF707|286075|zinc finger protein 707	NM_001100599|ZNF707|286075|zinc finger protein 707	NM_173831|ZNF707|286075|zinc finger protein 707	AK001126|ZNF707|286075|zinc finger protein 707	AK290432|ZNF707|286075|zinc finger protein 707	AK055198|ZNF707|286075|zinc finger protein 707	AK055263|ZNF707|286075|zinc finger protein 707	BC014894|ZNF707|286075|zinc finger protein 707
hg18_v1_chr5_-_88215034_88215049	0.0389059	SOX2.p2	NM_001193350|MEF2C|4208|myocyte enhancer factor 2C	NM_002397|MEF2C|4208|myocyte enhancer factor 2C
hg18_v1_chr1_-_20985677_20985733	0.0388597	SOX2.p2	BC053327|HP1BP3|50809|heterochromatin protein 1, binding protein 3	BC032139|HP1BP3|50809|heterochromatin protein 1, binding protein 3
hg18_v1_chr17_-_64568641_64568730	0.0387454	SOX2.p2	BC062472|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9	AK057068|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9	AY028899|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9	NM_080283|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9
hg18_v1_chr17_+_60563963_60564120	0.038705	SOX2.p2	AK309061|RGS9|8787|regulator of G-protein signaling 9	CR613211|RGS9|8787|regulator of G-protein signaling 9	AK290535|RGS9|8787|regulator of G-protein signaling 9	BC022504|RGS9|8787|regulator of G-protein signaling 9	AK301719|RGS9|8787|regulator of G-protein signaling 9	AF071476|RGS9|8787|regulator of G-protein signaling 9	AK289876|RGS9|8787|regulator of G-protein signaling 9	AF493933|RGS9|8787|regulator of G-protein signaling 9	AY585191|RGS9|8787|regulator of G-protein signaling 9
hg18_v1_chr6_-_30762957_30762971	0.0386201	SOX2.p2	AB073600|KIAA1949|170954|KIAA1949	BX647622|KIAA1949|170954|KIAA1949
hg18_v1_chr5_+_137542315_137542315	0.0385509	SOX2.p2	NM_005733|KIF20A|10112|kinesin family member 20A
hg18_v1_chr4_+_184817422_184817474	0.0384986	SOX2.p2	AL833571|C4orf41|60684|chromosome 4 open reading frame 41	AK096345|C4orf41|60684|chromosome 4 open reading frame 41	BX648499|C4orf41|60684|chromosome 4 open reading frame 41	NM_021942|C4orf41|60684|chromosome 4 open reading frame 41	NM_199053|C4orf41|60684|chromosome 4 open reading frame 41	BX647127|C4orf41|60684|chromosome 4 open reading frame 41	BX538044|C4orf41|60684|chromosome 4 open reading frame 41	BC040530|C4orf41|60684|chromosome 4 open reading frame 41	BC051724|C4orf41|60684|chromosome 4 open reading frame 41
hg18_v1_chr7_-_44834702_44834741	0.0384524	SOX2.p2	CR615278|H2AFV|94239|H2A histone family, member V
hg18_v1_chr2_+_24003648_24003674	0.0384408	SOX2.p2	BC037901|UBXN2A|165324|UBX domain protein 2A
hg18_v1_chr1_-_43628060_43628071	0.0384334	SOX2.p2	NM_052877|MED8|112950|mediator complex subunit 8	NM_201542|MED8|112950|mediator complex subunit 8
hg18_v1_chr14_-_104333123_104333130	0.038371	SOX2.p2	NM_001014431|AKT1|207|v-akt murine thymoma viral oncogene homolog 1	NM_001014432|AKT1|207|v-akt murine thymoma viral oncogene homolog 1
hg18_v1_chr14_-_20179689_20179689	0.0383587	SOX2.p2	NM_001001968|OR6S1|341799|olfactory receptor, family 6, subfamily S, member 1
hg18_v1_chr15_-_86890796_86890915	0.0383268	SOX2.p2	BC109060|DET1|55070|de-etiolated homolog 1 (Arabidopsis)	BC109061|DET1|55070|de-etiolated homolog 1 (Arabidopsis)	BC073867|DET1|55070|de-etiolated homolog 1 (Arabidopsis)	AK054603|DET1|55070|de-etiolated homolog 1 (Arabidopsis)	BC064591|DET1|55070|de-etiolated homolog 1 (Arabidopsis)	AB073887|DET1|55070|de-etiolated homolog 1 (Arabidopsis)	NM_001144074|DET1|55070|de-etiolated homolog 1 (Arabidopsis)	NM_017996|DET1|55070|de-etiolated homolog 1 (Arabidopsis)
hg18_v1_chr5_-_146441184_146441246	0.038257	SOX2.p2	AK294659|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta	NM_181677|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta	NM_181678|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta	AK295347|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta
hg18_v1_chr1_+_109043711_109043726	0.0382237	SOX2.p2	AY211915|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B
hg18_v1_chr8_-_7320013_7320013	0.0381848	SOX2.p2	AJ314834|DEFB104A|140596|defensin, beta 104A	BC100848|DEFB104A|140596|defensin, beta 104A	BC100849|DEFB104A|140596|defensin, beta 104A	BC100850|DEFB104A|140596|defensin, beta 104A	BC100851|DEFB104A|140596|defensin, beta 104A	NM_001040702|DEFB104B|503618|defensin, beta 104B	NM_080389|DEFB104A|140596|defensin, beta 104A
hg18_v1_chr2_-_127817143_127817274	0.0381152	SOX2.p2	AF239798|MAP3K2|10746|mitogen-activated protein kinase kinase kinase 2	NM_006609|MAP3K2|10746|mitogen-activated protein kinase kinase kinase 2	BC136293|MAP3K2|10746|mitogen-activated protein kinase kinase kinase 2	AF111105|MAP3K2|10746|mitogen-activated protein kinase kinase kinase 2
hg18_v1_chr22_+_29807231_29807334	0.0380966	SOX2.p2	AK128719|SMTN|6525|smoothelin	AF064238|SMTN|6525|smoothelin	AJ010306|SMTN|6525|smoothelin	AY061971|SMTN|6525|smoothelin	AY061972|SMTN|6525|smoothelin	NM_006932|SMTN|6525|smoothelin	NM_134269|SMTN|6525|smoothelin	NM_134270|SMTN|6525|smoothelin	Y13492|SMTN|6525|smoothelin	AK096953|SMTN|6525|smoothelin	AK293681|SMTN|6525|smoothelin	BC034237|SMTN|6525|smoothelin	AK300854|SMTN|6525|smoothelin
hg18_v1_chr1_-_114156429_114156620	0.0379903	SOX2.p2	AK002082|RSBN1|54665|round spermatid basic protein 1	BC026155|RSBN1|54665|round spermatid basic protein 1	NM_018364|RSBN1|54665|round spermatid basic protein 1	AK292552|RSBN1|54665|round spermatid basic protein 1
hg18_v1_chrX_+_100241453_100241453	0.0377285	SOX2.p2	NM_006733|CENPI|2491|centromere protein I	X97249|CENPI|2491|centromere protein I
hg18_v1_chr1_-_198644111_198644212	0.037722	SOX2.p2	AK022921|ZNF281|23528|zinc finger protein 281
hg18_v1_chr17_-_53420473_53420593	0.0376672	SOX2.p2	D28118|VEZF1|7716|vascular endothelial zinc finger 1
hg18_v1_chr3_+_75796170_75796176	0.0376554	SOX2.p2	AK000525|FLJ20518|647476|FSHD region gene 2 family, member C pseudogene	NM_001124759|FRG2C|100288801|FSHD region gene 2 family, member C
hg18_v1_chr1_-_177378801_177378846	0.0376068	SOX2.p2	FJ542283|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	BC065912|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	AK225255|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	AK309549|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	NM_001136000|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	NM_001168239|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	NM_005158|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2
hg18_v1_chr20_-_45360903_45361050	0.0375428	SOX2.p2	BC030721|ZMYND8|23613|zinc finger, MYND-type containing 8
hg18_v1_chr21_-_30893063_30893091	0.0375324	SOX2.p2	NM_181604|KRTAP6-2|337967|keratin associated protein 6-2	AB096952|KRTAP6-2|337967|keratin associated protein 6-2
hg18_v1_chr8_+_80685906_80685923	0.0375046	SOX2.p2	AK297594|STMN2|11075|stathmin-like 2	CR595801|STMN2|11075|stathmin-like 2	CR610743|STMN2|11075|stathmin-like 2	AK308557|STMN2|11075|stathmin-like 2	AK297485|STMN2|11075|stathmin-like 2	CR611375|STMN2|11075|stathmin-like 2
hg18_v1_chr15_+_54998181_54998207	0.0374951	SOX2.p2	BC050556|TCF12|6938|transcription factor 12	BC051769|TCF12|6938|transcription factor 12	M80627|TCF12|6938|transcription factor 12
hg18_v1_chr6_-_33879734_33879770	0.0374358	SOX2.p2	BC112314|MLN|4295|motilin	BC143981|MLN|4295|motilin	Y00695|MLN|4295|motilin	BC069675|MLN|4295|motilin	NM_001040109|MLN|4295|motilin	NM_001184698|MLN|4295|motilin	NM_002418|MLN|4295|motilin
hg18_v1_chr11_+_6176951_6177029	0.0373975	SOX2.p2	BC137225|OR52W1|120787|olfactory receptor, family 52, subfamily W, member 1	NM_001005178|OR52W1|120787|olfactory receptor, family 52, subfamily W, member 1
hg18_v1_chr3_-_117647011_117647031	0.0371478	SOX2.p2	AK315286|LSAMP|4045|limbic system-associated membrane protein
hg18_v1_chr6_-_32227645_32227677	0.0371327	SOX2.p2	BC063046|PRRT1|80863|proline-rich transmembrane protein 1	AK123424|PRRT1|80863|proline-rich transmembrane protein 1
hg18_v1_chr12_-_47790604_47790780	0.037103	SOX2.p2	DQ892407|LMBR1L|55716|limb region 1 homolog (mouse)-like	DQ895619|LMBR1L|55716|limb region 1 homolog (mouse)-like	BC015015|LMBR1L|55716|limb region 1 homolog (mouse)-like	BC031550|LMBR1L|55716|limb region 1 homolog (mouse)-like	AB033000|LMBR1L|55716|limb region 1 homolog (mouse)-like	AK001356|LMBR1L|55716|limb region 1 homolog (mouse)-like	CR625783|LMBR1L|55716|limb region 1 homolog (mouse)-like
hg18_v1_chr6_-_32227695_32227701	0.0370932	SOX2.p2	AK054885|PRRT1|80863|proline-rich transmembrane protein 1	NM_030651|PRRT1|80863|proline-rich transmembrane protein 1
hg18_v1_chr5_-_135259403_135259414	0.0370588	SOX2.p2	BC066283|IL9|3578|interleukin 9	BC066284|IL9|3578|interleukin 9	BC066285|IL9|3578|interleukin 9	BC066286|IL9|3578|interleukin 9	BC066287|IL9|3578|interleukin 9	M30134|IL9|3578|interleukin 9	NM_000590|IL9|3578|interleukin 9	S63356|IL9|3578|interleukin 9	X17543|IL9|3578|interleukin 9
hg18_v1_chrX_+_119268518_119268711	0.0370389	SOX2.p2	BC042753|ZBTB33|10009|zinc finger and BTB domain containing 33	NM_006777|ZBTB33|10009|zinc finger and BTB domain containing 33	NM_001184742|ZBTB33|10009|zinc finger and BTB domain containing 33	BX538016|ZBTB33|10009|zinc finger and BTB domain containing 33	AL833604|ZBTB33|10009|zinc finger and BTB domain containing 33	AK312321|ZBTB33|10009|zinc finger and BTB domain containing 33	BX538101|ZBTB33|10009|zinc finger and BTB domain containing 33
hg18_v1_chr8_-_72919241_72919284	0.0369919	SOX2.p2	AK313102|MSC|9242|musculin	BC006313|MSC|9242|musculin	BC067827|MSC|9242|musculin	NM_005098|MSC|9242|musculin
hg18_v1_chr3_-_14963943_14963978	0.0368334	SOX2.p2	
hg18_v1_chr2_+_220017617_220017638	0.0368002	SOX2.p2	AY603755|SPEG|10290|SPEG complex locus
hg18_v1_chr22_-_16020076_16020152	0.0367815	SOX2.p2	CR610650|CECR5|27440|cat eye syndrome chromosome region, candidate 5	CR626647|CECR5|27440|cat eye syndrome chromosome region, candidate 5	CR598180|CECR5|27440|cat eye syndrome chromosome region, candidate 5	CR600657|CECR5|27440|cat eye syndrome chromosome region, candidate 5	AK001034|CECR5|27440|cat eye syndrome chromosome region, candidate 5	CR596430|CECR5|27440|cat eye syndrome chromosome region, candidate 5	CR622420|CECR5|27440|cat eye syndrome chromosome region, candidate 5	BC042540|CECR5|27440|cat eye syndrome chromosome region, candidate 5	CR612464|CECR5|27440|cat eye syndrome chromosome region, candidate 5
hg18_v1_chr4_-_52578542_52578542	0.0367671	SOX2.p2	CR749811|LRRC66|339977|leucine rich repeat containing 66	NM_001024611|LRRC66|339977|leucine rich repeat containing 66
hg18_v1_chr2_+_27293737_27293779	0.0367666	SOX2.p2	BC065510|CAD|790|carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase	NM_004341|CAD|790|carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase	AK226105|CAD|790|carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase
hg18_v1_chr3_+_185515543_185515977	0.0367085	SOX2.p2	NM_182917|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AK131407|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AF281070|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AY082886|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AF002815|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AB210013|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1
hg18_v1_chr3_-_188935363_188935388	0.0366815	SOX2.p2	EU139066|BCL6|604|B-cell CLL/lymphoma 6	NM_001134738|BCL6|604|B-cell CLL/lymphoma 6
hg18_v1_chr9_+_130684189_130684219	0.0366746	SOX2.p2	NM_001127245|LRRC8A|56262|leucine rich repeat containing 8 family, member A	NM_019594|LRRC8A|56262|leucine rich repeat containing 8 family, member A
hg18_v1_chr15_+_99276982_99277089	0.036661	SOX2.p2	NM_024652|LRRK1|79705|leucine-rich repeat kinase 1	BC068080|LRRK1|79705|leucine-rich repeat kinase 1
hg18_v1_chr3_-_169295752_169295867	0.0366518	SOX2.p2	U55853|GOLIM4|27333|golgi integral membrane protein 4	BC143232|GOLIM4|27333|golgi integral membrane protein 4	BC143233|GOLIM4|27333|golgi integral membrane protein 4	BC171748|GOLIM4|27333|golgi integral membrane protein 4
hg18_v1_chr5_+_86599902_86599920	0.0365949	SOX2.p2	M23379|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1	NM_002890|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1
hg18_v1_chr5_-_111120817_111120853	0.0365896	SOX2.p2	AK315617|C5orf13|9315|chromosome 5 open reading frame 13	NM_004772|C5orf13|9315|chromosome 5 open reading frame 13	U30521|C5orf13|9315|chromosome 5 open reading frame 13
hg18_v1_chr10_+_80942362_80942362	0.036583	SOX2.p2	BC070048|EIF5AL1|143244|eukaryotic translation initiation factor 5A-like 1	NM_001099692|EIF5AL1|143244|eukaryotic translation initiation factor 5A-like 1
hg18_v1_chr1_-_13483073_13483141	0.0365695	SOX2.p2	NM_001012277|PRAMEF7|441871|PRAME family member 7	BC144565|PRAMEF7|441871|PRAME family member 7
hg18_v1_chr9_-_4731085_4731262	0.036528	SOX2.p2	AB021870|AK3|50808|adenylate kinase 3	DQ891660|AK3|50808|adenylate kinase 3	DQ894847|AK3|50808|adenylate kinase 3	AK027534|AK3|50808|adenylate kinase 3	BC013771|AK3|50808|adenylate kinase 3	AK001951|AK3|50808|adenylate kinase 3	AK001553|AK3|50808|adenylate kinase 3	AK298200|AK3|50808|adenylate kinase 3	NM_016282|AK3|50808|adenylate kinase 3
hg18_v1_chr6_+_43319199_43319214	0.0365036	SOX2.p2	NM_032538|TTBK1|84630|tau tubulin kinase 1
hg18_v1_chr8_+_22078622_22078810	0.0364939	SOX2.p2	AB209590|BMP1|649|bone morphogenetic protein 1	BC002593|BMP1|649|bone morphogenetic protein 1	BC009305|BMP1|649|bone morphogenetic protein 1	BC032105|BMP1|649|bone morphogenetic protein 1	BC044626|BMP1|649|bone morphogenetic protein 1	BC142953|BMP1|649|bone morphogenetic protein 1	AK291620|BMP1|649|bone morphogenetic protein 1	BC136679|BMP1|649|bone morphogenetic protein 1	BC144365|BMP1|649|bone morphogenetic protein 1	BC144366|BMP1|649|bone morphogenetic protein 1	BC101763|BMP1|649|bone morphogenetic protein 1	BC101765|BMP1|649|bone morphogenetic protein 1	BC143338|BMP1|649|bone morphogenetic protein 1
hg18_v1_chr8_+_59486376_59486502	0.0364417	SOX2.p2	BC113645|UBXN2B|137886|UBX domain protein 2B	NM_001077619|UBXN2B|137886|UBX domain protein 2B	AK126300|UBXN2B|137886|UBX domain protein 2B	AL831990|UBXN2B|137886|UBX domain protein 2B	AL833075|UBXN2B|137886|UBX domain protein 2B	BX647876|UBXN2B|137886|UBX domain protein 2B
hg18_v1_chr1_+_70459592_70459666	0.0363761	SOX2.p2	BC017359|SRSF11|9295|serine/arginine-rich splicing factor 11
hg18_v1_chr22_-_37480898_37480961	0.0363414	SOX2.p2	AK304188|SUN2|25777|Sad1 and UNC84 domain containing 2	AK295787|SUN2|25777|Sad1 and UNC84 domain containing 2
hg18_v1_chr9_-_93750916_93750982	0.036325	SOX2.p2	BC033697|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2
hg18_v1_chr21_-_26345294_26345335	0.0363183	SOX2.p2	
hg18_v1_chr22_-_35011703_35011715	0.0362294	SOX2.p2	BC011915|MYH9|4627|myosin, heavy chain 9, non-muscle
hg18_v1_chr7_+_120752656_120752656	0.0361893	SOX2.p2	AF152584|WNT16|51384|wingless-type MMTV integration site family, member 16	NM_016087|WNT16|51384|wingless-type MMTV integration site family, member 16
hg18_v1_chr22_+_43451600_43451668	0.0361867	SOX2.p2	AK091884|PRR5|55615|proline rich 5 (renal)	CR605746|PRR5|55615|proline rich 5 (renal)	AK055848|PRR5|55615|proline rich 5 (renal)
hg18_v1_chrX_+_122923236_122923272	0.0361515	SOX2.p2	NM_001042750|STAG2|10735|stromal antigen 2	NM_001042751|STAG2|10735|stromal antigen 2	NM_006603|STAG2|10735|stromal antigen 2	AL831939|STAG2|10735|stromal antigen 2	BX641002|STAG2|10735|stromal antigen 2	CR749433|STAG2|10735|stromal antigen 2	BX641003|STAG2|10735|stromal antigen 2
hg18_v1_chr19_-_13074513_13074539	0.0361334	SOX2.p2	M22637|LYL1|4066|lymphoblastic leukemia derived sequence 1
hg18_v1_chr7_+_107008439_107008453	0.0361276	SOX2.p2	NM_001008405|BCAP29|55973|B-cell receptor-associated protein 29	BT006981|BCAP29|55973|B-cell receptor-associated protein 29
hg18_v1_chr3_+_52788976_52788981	0.036118	SOX2.p2	AK303156|ITIH1|3697|inter-alpha (globulin) inhibitor H1	NM_001166435|ITIH1|3697|inter-alpha (globulin) inhibitor H1	NM_001166436|ITIH1|3697|inter-alpha (globulin) inhibitor H1	AK303110|ITIH1|3697|inter-alpha (globulin) inhibitor H1
hg18_v1_chr15_+_76517532_76517621	0.0361121	SOX2.p2	NM_004136|IREB2|3658|iron-responsive element binding protein 2
hg18_v1_chr5_+_140790310_140790352	0.036073	SOX2.p2	NM_003735|PCDHGA12|26025|protocadherin gamma subfamily A, 12	NM_032094|PCDHGA12|26025|protocadherin gamma subfamily A, 12
hg18_v1_chr22_+_44828338_44828438	0.0360268	SOX2.p2	
hg18_v1_chr3_-_115825742_115825742	0.0360114	SOX2.p2	BC029041|ZBTB20|26137|zinc finger and BTB domain containing 20	NM_001164347|ZBTB20|26137|zinc finger and BTB domain containing 20
hg18_v1_chr9_-_97308687_97308702	0.0359711	SOX2.p2	AB209495|PTCH1|5727|patched 1	AB233424|PTCH1|5727|patched 1
hg18_v1_chr3_+_198960820_198960820	0.0359549	SOX2.p2	AK303462|FYTTD1|84248|forty-two-three domain containing 1	NM_001011537|FYTTD1|84248|forty-two-three domain containing 1
hg18_v1_chr7_-_99612757_99612970	0.0359237	SOX2.p2	AM392909|GPC2|221914|glypican 2	DQ893325|GPC2|221914|glypican 2	DQ896641|GPC2|221914|glypican 2	AL834418|GPC2|221914|glypican 2	AK096281|GPC2|221914|glypican 2	BC027972|GPC2|221914|glypican 2	NM_152742|GPC2|221914|glypican 2	AY093588|GPC2|221914|glypican 2
hg18_v1_chr3_+_157071141_157071157	0.0358789	SOX2.p2	AK291504|GMPS|8833|guanine monphosphate synthetase	BC012178|GMPS|8833|guanine monphosphate synthetase
hg18_v1_chr9_+_96561750_96561886	0.0358668	SOX2.p2	CR626537|C9orf3|84909|chromosome 9 open reading frame 3	NM_001193329|C9orf3|84909|chromosome 9 open reading frame 3	AJ560639|C9orf3|84909|chromosome 9 open reading frame 3
hg18_v1_chr19_+_10932713_10932718	0.035846	SOX2.p2	BC007302|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
hg18_v1_chr14_+_23710924_23710941	0.0358339	SOX2.p2	AK291191|REC8|9985|REC8 homolog (yeast)
hg18_v1_chr14_+_56927066_56927105	0.0358277	SOX2.p2	BC118589|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit	BC122557|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit
hg18_v1_chr11_+_17289030_17289089	0.0358153	SOX2.p2	
hg18_v1_chr2_+_208284484_208284609	0.0357448	SOX2.p2	AK097751|CCNYL1|151195|cyclin Y-like 1	NM_001142300|CCNYL1|151195|cyclin Y-like 1	NM_152523|CCNYL1|151195|cyclin Y-like 1
hg18_v1_chr1_+_246617532_246617532	0.0356006	SOX2.p2	NM_001005471|OR2T6|254879|olfactory receptor, family 2, subfamily T, member 6
hg18_v1_chr22_+_21852551_21852690	0.0355543	SOX2.p2	NM_004327|BCR|613|breakpoint cluster region	NM_021574|BCR|613|breakpoint cluster region	Y00661|BCR|613|breakpoint cluster region
hg18_v1_chr12_-_49763566_49763715	0.0355276	SOX2.p2	AJ298133|CSRNP2|81566|cysteine-serine-rich nuclear protein 2	NM_030809|CSRNP2|81566|cysteine-serine-rich nuclear protein 2
hg18_v1_chr2_-_136311219_136311219	0.0354855	SOX2.p2	NM_002299|LCT|3938|lactase	X07994|LCT|3938|lactase
hg18_v1_chr6_+_72653420_72653447	0.0354744	SOX2.p2	AY190519|RIMS1|22999|regulating synaptic membrane exocytosis 1
hg18_v1_chr11_-_129689669_129689816	0.0354342	SOX2.p2	AK314701|ZBTB44|29068|zinc finger and BTB domain containing 44	BC030580|ZBTB44|29068|zinc finger and BTB domain containing 44	BC049375|ZBTB44|29068|zinc finger and BTB domain containing 44	BC071729|ZBTB44|29068|zinc finger and BTB domain containing 44	NM_014155|ZBTB44|29068|zinc finger and BTB domain containing 44
hg18_v1_chr12_-_6668085_6668085	0.0354068	SOX2.p2	NM_001039916|ZNF384|171017|zinc finger protein 384
hg18_v1_chr11_+_48466844_48466920	0.0353977	SOX2.p2	BC140738|OR4A47|403253|olfactory receptor, family 4, subfamily A, member 47	NM_001005512|OR4A47|403253|olfactory receptor, family 4, subfamily A, member 47
hg18_v1_chr2_-_215957927_215957938	0.0353799	SOX2.p2	U42458|FN1|2335|fibronectin 1
hg18_v1_chr8_+_81560971_81561107	0.0353514	SOX2.p2	AJ319673|ZBTB10|65986|zinc finger and BTB domain containing 10	NM_001105539|ZBTB10|65986|zinc finger and BTB domain containing 10	NM_023929|ZBTB10|65986|zinc finger and BTB domain containing 10	BC127097|ZBTB10|65986|zinc finger and BTB domain containing 10	BC127098|ZBTB10|65986|zinc finger and BTB domain containing 10	BC148254|ZBTB10|65986|zinc finger and BTB domain containing 10
hg18_v1_chr4_+_175441619_175441757	0.0353395	SOX2.p2	NM_001145314|KIAA1712|80817|KIAA1712	BC038667|KIAA1712|80817|KIAA1712	AB051499|KIAA1712|80817|KIAA1712	AK094961|KIAA1712|80817|KIAA1712	AK292484|KIAA1712|80817|KIAA1712
hg18_v1_chr7_+_105390892_105390977	0.0353391	SOX2.p2	NM_152750|CDHR3|222256|cadherin-related family member 3	AK126338|CDHR3|222256|cadherin-related family member 3	AK131293|CDHR3|222256|cadherin-related family member 3	AK304118|CDHR3|222256|cadherin-related family member 3	BC111696|CDHR3|222256|cadherin-related family member 3	BC111738|CDHR3|222256|cadherin-related family member 3	AK304352|CDHR3|222256|cadherin-related family member 3
hg18_v1_chr5_-_137542198_137542267	0.0353176	SOX2.p2	BC008039|BRD8|10902|bromodomain containing 8	BC008076|BRD8|10902|bromodomain containing 8	AB209079|BRD8|10902|bromodomain containing 8	AK310380|BRD8|10902|bromodomain containing 8	AK289951|BRD8|10902|bromodomain containing 8	AK293621|BRD8|10902|bromodomain containing 8	AK297756|BRD8|10902|bromodomain containing 8	AK312333|BRD8|10902|bromodomain containing 8	AK225928|BRD8|10902|bromodomain containing 8	AL136823|BRD8|10902|bromodomain containing 8	NM_001164326|BRD8|10902|bromodomain containing 8	NM_006696|BRD8|10902|bromodomain containing 8	NM_139199|BRD8|10902|bromodomain containing 8
hg18_v1_chr4_+_175441402_175441469	0.0352931	SOX2.p2	NM_001040157|KIAA1712|80817|KIAA1712
hg18_v1_chr12_-_119391884_119391894	0.0352878	SOX2.p2	CR606248|SRSF9|8683|serine/arginine-rich splicing factor 9
hg18_v1_chr8_-_7710547_7710647	0.0352723	SOX2.p2	AF540979|DEFB107A|245910|defensin, beta 107A	AY122467|DEFB107A|245910|defensin, beta 107A	BC137510|DEFB107A|245910|defensin, beta 107A	BC137513|DEFB107A|245910|defensin, beta 107A	DQ119826|DEFB107A|245910|defensin, beta 107A	NM_001037668|DEFB107A|245910|defensin, beta 107A	NM_001040705|DEFB107B|503614|defensin, beta 107B
hg18_v1_chr17_-_45620911_45620925	0.0352696	SOX2.p2	AK297731|COL1A1|1277|collagen, type I, alpha 1
hg18_v1_chr16_-_1772577_1772609	0.0352557	SOX2.p2	NM_080861|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3
hg18_v1_chr9_-_87904844_87904965	0.0352148	SOX2.p2	AK075557|GOLM1|51280|golgi membrane protein 1	AK092943|GOLM1|51280|golgi membrane protein 1	NM_177937|GOLM1|51280|golgi membrane protein 1
hg18_v1_chr10_+_35456095_35456188	0.0351874	SOX2.p2	D14825|CREM|1390|cAMP responsive element modulator
hg18_v1_chr1_+_86942810_86942868	0.0351158	SOX2.p2	NM_016009|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1
hg18_v1_chr1_+_2927905_2927925	0.0350435	SOX2.p2	NM_080431|ACTRT2|140625|actin-related protein T2	AK058153|ACTRT2|140625|actin-related protein T2	AK314500|ACTRT2|140625|actin-related protein T2	BC029499|ACTRT2|140625|actin-related protein T2
hg18_v1_chr17_+_22982319_22982342	0.0350432	SOX2.p2	AB006782|LGALS9|3965|lectin, galactoside-binding, soluble, 9	AK223232|LGALS9|3965|lectin, galactoside-binding, soluble, 9
hg18_v1_chr20_-_43577677_43577677	0.0350432	SOX2.p2	AY372172|SPINT3|10816|serine peptidase inhibitor, Kunitz type, 3	NM_006652|SPINT3|10816|serine peptidase inhibitor, Kunitz type, 3
hg18_v1_chr21_-_30908093_30908119	0.0350422	SOX2.p2	NM_181602|KRTAP6-1|337966|keratin associated protein 6-1	AB096954|KRTAP6-1|337966|keratin associated protein 6-1
hg18_v1_chr10_-_98109048_98109081	0.0350281	SOX2.p2	AF367761|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein	NM_001040102|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein	NM_001040103|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein	NM_033207|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein
hg18_v1_chr15_+_70193652_70193652	0.0349835	SOX2.p2	AK097557|SENP8|123228|SUMO/sentrin specific peptidase family member 8	NM_001166340|SENP8|123228|SUMO/sentrin specific peptidase family member 8
hg18_v1_chr2_+_182558795_182558993	0.0349825	SOX2.p2	NM_001080545|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C	AK129898|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C	AF494535|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C	BX647581|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C	BC017943|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C
hg18_v1_chr19_+_7607976_7608009	0.0349684	SOX2.p2	NM_001127396|STXBP2|6813|syntaxin binding protein 2	NM_006949|STXBP2|6813|syntaxin binding protein 2	AK303701|STXBP2|6813|syntaxin binding protein 2	CR601226|STXBP2|6813|syntaxin binding protein 2	CR611106|STXBP2|6813|syntaxin binding protein 2	CR617049|STXBP2|6813|syntaxin binding protein 2	AK314230|STXBP2|6813|syntaxin binding protein 2	AK222967|STXBP2|6813|syntaxin binding protein 2	AK222977|STXBP2|6813|syntaxin binding protein 2
hg18_v1_chr15_+_72695248_72695301	0.0348927	SOX2.p2	AK293769|CLK3|1198|CDC-like kinase 3	BC019881|CLK3|1198|CDC-like kinase 3	CR933693|CLK3|1198|CDC-like kinase 3	AK291983|CLK3|1198|CDC-like kinase 3	AK301689|CLK3|1198|CDC-like kinase 3	BC002555|CLK3|1198|CDC-like kinase 3	AK225680|CLK3|1198|CDC-like kinase 3	BC006103|CLK3|1198|CDC-like kinase 3
hg18_v1_chr4_+_76868763_76868814	0.0348843	SOX2.p2	BC016672|USO1|8615|USO1 vesicle docking protein homolog (yeast)	AL832010|USO1|8615|USO1 vesicle docking protein homolog (yeast)	BC006398|USO1|8615|USO1 vesicle docking protein homolog (yeast)
hg18_v1_chr1_-_203985932_203985939	0.0348773	SOX2.p2	
hg18_v1_chrX_-_117134652_117134855	0.0347832	SOX2.p2	AL591986|KLHL13|90293|kelch-like 13 (Drosophila)	AK316509|KLHL13|90293|kelch-like 13 (Drosophila)	NM_001168302|KLHL13|90293|kelch-like 13 (Drosophila)	NM_001168303|KLHL13|90293|kelch-like 13 (Drosophila)
hg18_v1_chr19_-_864203_864223	0.0347774	SOX2.p2	CR616662|C19orf22|91300|chromosome 19 open reading frame 22	CR619216|C19orf22|91300|chromosome 19 open reading frame 22	CR616128|C19orf22|91300|chromosome 19 open reading frame 22	CR614470|C19orf22|91300|chromosome 19 open reading frame 22	CR622307|C19orf22|91300|chromosome 19 open reading frame 22
hg18_v1_chr1_-_17638797_17638825	0.0347385	SOX2.p2	NM_018715|RCC2|55920|regulator of chromosome condensation 2
hg18_v1_chr5_+_170221441_170221577	0.0347172	SOX2.p2	AK298785|RANBP17|64901|RAN binding protein 17	AK315159|RANBP17|64901|RAN binding protein 17
hg18_v1_chr1_+_43410587_43410679	0.0347167	SOX2.p2	NM_001167965|WDR65|149465|WD repeat domain 65	NM_152498|WDR65|149465|WD repeat domain 65	NM_001167966|WDR65|149465|WD repeat domain 65	AK056562|WDR65|149465|WD repeat domain 65	BC117280|WDR65|149465|WD repeat domain 65	BC117306|WDR65|149465|WD repeat domain 65	BC143804|WDR65|149465|WD repeat domain 65
hg18_v1_chr2_+_208284691_208284800	0.0347038	SOX2.p2	BC067253|CCNYL1|151195|cyclin Y-like 1
hg18_v1_chrX_-_103060777_103060803	0.0346999	SOX2.p2	AK026512|LOC100128594|100128594|hypothetical LOC100128594
hg18_v1_chrX_+_119621771_119621862	0.0346272	SOX2.p2	NM_014060|MCTS1|28985|malignant T cell amplified sequence 1	AK311993|MCTS1|28985|malignant T cell amplified sequence 1	AB034206|MCTS1|28985|malignant T cell amplified sequence 1
hg18_v1_chr17_-_3518654_3518721	0.0346249	SOX2.p2	AF028823|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	NM_014604|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3
hg18_v1_chr5_+_68702617_68702671	0.034615	SOX2.p2	NM_133340|RAD17|5884|RAD17 homolog (S. pombe)	NM_133341|RAD17|5884|RAD17 homolog (S. pombe)	AJ001642|RAD17|5884|RAD17 homolog (S. pombe)	AJ004977|RAD17|5884|RAD17 homolog (S. pombe)	AF098533|RAD17|5884|RAD17 homolog (S. pombe)	AF098534|RAD17|5884|RAD17 homolog (S. pombe)
hg18_v1_chr8_-_8788149_8788547	0.0346028	SOX2.p2	NM_004225|MFHAS1|9258|malignant fibrous histiocytoma amplified sequence 1
hg18_v1_chr1_-_199742864_199742868	0.0345657	SOX2.p2	BC018806|CSRP1|1465|cysteine and glycine-rich protein 1	CR606958|CSRP1|1465|cysteine and glycine-rich protein 1	CR598103|CSRP1|1465|cysteine and glycine-rich protein 1	CR613755|CSRP1|1465|cysteine and glycine-rich protein 1	CR613760|CSRP1|1465|cysteine and glycine-rich protein 1	CR616700|CSRP1|1465|cysteine and glycine-rich protein 1
hg18_v1_chr12_+_67919619_67919693	0.0344147	SOX2.p2	CR623508|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	BC005000|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	BC000714|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	X67337|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	CR601123|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	AK292024|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	DQ892159|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	EU176688|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa
hg18_v1_chr11_+_113776582_113776642	0.0343933	SOX2.p2	AF156098|RBM7|10179|RNA binding motif protein 7	CR592590|RBM7|10179|RNA binding motif protein 7	BC034381|RBM7|10179|RNA binding motif protein 7	NM_016090|RBM7|10179|RNA binding motif protein 7	AK225615|RBM7|10179|RNA binding motif protein 7	BC013320|RBM7|10179|RNA binding motif protein 7	BC070262|RBM7|10179|RNA binding motif protein 7	CR593114|RBM7|10179|RNA binding motif protein 7
hg18_v1_chr9_-_19368815_19368917	0.0343838	SOX2.p2	BC035447|RPS6|6194|ribosomal protein S6
hg18_v1_chr13_-_29938029_29938081	0.0343553	SOX2.p2	CR592109|HMGB1|3146|high-mobility group box 1	CR607900|HMGB1|3146|high-mobility group box 1	AK057120|HMGB1|3146|high-mobility group box 1	AK310975|HMGB1|3146|high-mobility group box 1	CR600442|HMGB1|3146|high-mobility group box 1	CR601960|HMGB1|3146|high-mobility group box 1	CR591935|HMGB1|3146|high-mobility group box 1	AK291494|HMGB1|3146|high-mobility group box 1	AK304506|HMGB1|3146|high-mobility group box 1	NM_002128|HMGB1|3146|high-mobility group box 1
hg18_v1_chr10_-_61336242_61336419	0.0343371	SOX2.p2	BC064391|CCDC6|8030|coiled-coil domain containing 6	BC036757|CCDC6|8030|coiled-coil domain containing 6	BC022284|CCDC6|8030|coiled-coil domain containing 6	AK292593|CCDC6|8030|coiled-coil domain containing 6	NM_005436|CCDC6|8030|coiled-coil domain containing 6
hg18_v1_chr1_+_243199690_243199793	0.0343347	SOX2.p2	NM_032328|EFCAB2|84288|EF-hand calcium binding domain 2
hg18_v1_chr12_-_31368347_31368362	0.0342936	SOX2.p2	AK294457|FAM60A|58516|family with sequence similarity 60, member A
hg18_v1_chr19_-_14490235_14490346	0.0342658	SOX2.p2	CR601481|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1
hg18_v1_chr6_-_55848346_55848351	0.0342572	SOX2.p2	AK291559|BMP5|653|bone morphogenetic protein 5
hg18_v1_chr20_+_29309127_29309127	0.0341798	SOX2.p2	DQ012019|DEFB115|245929|defensin, beta 115	NM_001037730|DEFB115|245929|defensin, beta 115
hg18_v1_chr7_+_80105907_80105971	0.0341238	SOX2.p2	CR606551|CD36|948|CD36 molecule (thrombospondin receptor)	CR623153|CD36|948|CD36 molecule (thrombospondin receptor)	CR598434|CD36|948|CD36 molecule (thrombospondin receptor)	M98398|CD36|948|CD36 molecule (thrombospondin receptor)	M98399|CD36|948|CD36 molecule (thrombospondin receptor)	M24795|CD36|948|CD36 molecule (thrombospondin receptor)
hg18_v1_chrX_+_122923279_122923358	0.0340468	SOX2.p2	BC001765|STAG2|10735|stromal antigen 2
hg18_v1_chr15_-_70838703_70838831	0.0339414	SOX2.p2	
hg18_v1_chr8_+_79590890_79590890	0.0339318	SOX2.p2	NM_006823|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha	NM_181839|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha	S76965|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha
hg18_v1_chr12_+_95112385_95112412	0.033864	SOX2.p2	BC017371|ELK3|2004|ELK3, ETS-domain protein (SRF accessory protein 2)
hg18_v1_chr1_-_183392442_183392739	0.0338514	SOX2.p2	AK226103|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	AF288399|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	AK074936|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	BC045535|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	BC053961|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	BC026883|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	BC035430|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	BC039738|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	AK098359|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	AK312801|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	AK074993|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	NM_030934|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like
hg18_v1_chr8_-_52884456_52884557	0.0338396	SOX2.p2	EU170240|PXDNL|137902|peroxidasin homolog (Drosophila)-like	AY877349|PXDNL|137902|peroxidasin homolog (Drosophila)-like	NM_144651|PXDNL|137902|peroxidasin homolog (Drosophila)-like
hg18_v1_chr8_+_24207524_24207581	0.0338041	SOX2.p2	NM_014265|ADAM28|10863|ADAM metallopeptidase domain 28	NM_021777|ADAM28|10863|ADAM metallopeptidase domain 28	AK293382|ADAM28|10863|ADAM metallopeptidase domain 28	AK303437|ADAM28|10863|ADAM metallopeptidase domain 28	AJ242015|ADAM28|10863|ADAM metallopeptidase domain 28	AF137334|ADAM28|10863|ADAM metallopeptidase domain 28	AF137335|ADAM28|10863|ADAM metallopeptidase domain 28	BC136478|ADAM28|10863|ADAM metallopeptidase domain 28	BC144140|ADAM28|10863|ADAM metallopeptidase domain 28
hg18_v1_chr18_-_30056431_30056431	0.0337799	SOX2.p2	NM_001198547|NOL4|8715|nucleolar protein 4
hg18_v1_chr15_+_64372686_64372713	0.0337749	SOX2.p2	NM_133375|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like	AK295392|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like	BC022089|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like
hg18_v1_chrX_+_102852492_102852492	0.0337405	SOX2.p2	AK130867|TMEM31|203562|transmembrane protein 31	BC029575|TMEM31|203562|transmembrane protein 31	NM_182541|TMEM31|203562|transmembrane protein 31
hg18_v1_chr12_-_31635089_31635281	0.0336637	SOX2.p2	BC068580|DENND5B|160518|DENN/MADD domain containing 5B	NM_144973|DENND5B|160518|DENN/MADD domain containing 5B
hg18_v1_chr1_-_11830328_11830429	0.0336556	SOX2.p2	DQ893115|NPPA|4878|natriuretic peptide A	DQ896389|NPPA|4878|natriuretic peptide A	EU176780|NPPA|4878|natriuretic peptide A	M30262|NPPA|4878|natriuretic peptide A	BC005893|NPPA|4878|natriuretic peptide A	NM_006172|NPPA|4878|natriuretic peptide A
hg18_v1_chr4_-_110843999_110844081	0.0336448	SOX2.p2	DQ894589|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	EU176306|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	U20537|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	BC000305|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	BC004460|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	NM_001226|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	NM_032992|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	U20536|CASP6|839|caspase 6, apoptosis-related cysteine peptidase
hg18_v1_chr14_+_66725862_66725930	0.0336238	SOX2.p2	NM_173526|FAM71D|161142|family with sequence similarity 71, member D	AK093449|FAM71D|161142|family with sequence similarity 71, member D	AK302154|FAM71D|161142|family with sequence similarity 71, member D	BC037380|FAM71D|161142|family with sequence similarity 71, member D	BC050401|FAM71D|161142|family with sequence similarity 71, member D
hg18_v1_chr12_+_103375116_103375318	0.0335878	SOX2.p2	AF239820|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11	AJ289134|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11	AJ269537|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11
hg18_v1_chr20_+_9406460_9406567	0.0335743	SOX2.p2	AK057634|PLCB4|5332|phospholipase C, beta 4
hg18_v1_chr12_-_89976261_89976261	0.0335561	SOX2.p2	NM_007035|KERA|11081|keratocan
hg18_v1_chr5_+_86599982_86600036	0.0335441	SOX2.p2	
hg18_v1_chr2_+_12775814_12775883	0.0334932	SOX2.p2	
hg18_v1_chr14_+_20048451_20048470	0.0334864	SOX2.p2	BC133002|RNASE10|338879|ribonuclease, RNase A family, 10 (non-active)	BC133028|RNASE10|338879|ribonuclease, RNase A family, 10 (non-active)	AY665805|RNASE10|338879|ribonuclease, RNase A family, 10 (non-active)	NM_001012975|RNASE10|338879|ribonuclease, RNase A family, 10 (non-active)
hg18_v1_chr11_-_62230078_62230466	0.0334758	SOX2.p2	CR621335|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	CR617488|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	BC041640|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	BC012140|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	BC004911|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	AK075317|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	AK225029|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	AK027524|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	NM_032667|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	CR602177|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	CR609599|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)
hg18_v1_chr19_+_19164649_19164715	0.0334685	SOX2.p2	CR622780|RFXANK|8625|regulatory factor X-associated ankyrin-containing protein
hg18_v1_chr1_+_1157485_1157595	0.0334196	SOX2.p2	NM_080605|B3GALT6|126792|UDP-Gal:betaGal beta 1,3-galactosyltransferase polypeptide 6	BC051719|B3GALT6|126792|UDP-Gal:betaGal beta 1,3-galactosyltransferase polypeptide 6
hg18_v1_chr7_+_143457083_143457138	0.0334042	SOX2.p2	BC136889|OR2A14|135941|olfactory receptor, family 2, subfamily A, member 14	NM_001001659|OR2A14|135941|olfactory receptor, family 2, subfamily A, member 14
hg18_v1_chr18_-_3209846_3209875	0.0332817	SOX2.p2	BC116183|MYOM1|8736|myomesin 1, 185kDa	BC116184|MYOM1|8736|myomesin 1, 185kDa
hg18_v1_chr19_+_46462113_46462121	0.0332743	SOX2.p2	AK022863|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	AK127057|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	AK291762|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	AK308156|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1
hg18_v1_chr15_-_32289480_32289554	0.0332693	SOX2.p2	BC026234|C15orf29|79768|chromosome 15 open reading frame 29	AL136908|C15orf29|79768|chromosome 15 open reading frame 29	AK293021|C15orf29|79768|chromosome 15 open reading frame 29	BC111000|C15orf29|79768|chromosome 15 open reading frame 29	AK297904|C15orf29|79768|chromosome 15 open reading frame 29	CR596194|C15orf29|79768|chromosome 15 open reading frame 29
hg18_v1_chr5_-_41107161_41107200	0.0332674	SOX2.p2	BC052962|HEATR7B2|133558|HEAT repeat family member 7B2	BC034600|HEATR7B2|133558|HEAT repeat family member 7B2	NM_173489|HEATR7B2|133558|HEAT repeat family member 7B2
hg18_v1_chr4_+_14950657_14950709	0.0332382	SOX2.p2	BX647781|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7	NM_001135170|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7	AK314802|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7	BC022187|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7	BC024015|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7
hg18_v1_chr17_-_36570508_36570511	0.0331967	SOX2.p2	AJ406936|KRTAP4-4|84616|keratin associated protein 4-4	NM_032524|KRTAP4-4|84616|keratin associated protein 4-4	AJ296168|KRTAP4-4|84616|keratin associated protein 4-4
hg18_v1_chr9_-_139564656_139564806	0.033171	SOX2.p2	AK125060|PNPLA7|375775|patatin-like phospholipase domain containing 7	AK126267|PNPLA7|375775|patatin-like phospholipase domain containing 7	NM_001098537|PNPLA7|375775|patatin-like phospholipase domain containing 7	NM_152286|PNPLA7|375775|patatin-like phospholipase domain containing 7
hg18_v1_chr11_+_117720268_117720321	0.0331535	SOX2.p2	NM_000073|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	AK313966|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	AK315895|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	AK310622|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	BC069685|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	X04145|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	AK223314|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	AK310578|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	BC113830|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)
hg18_v1_chr11_+_125586828_125586917	0.0330961	SOX2.p2	NM_024556|FAM118B|79607|family with sequence similarity 118, member B	CR625659|FAM118B|79607|family with sequence similarity 118, member B	AK315615|FAM118B|79607|family with sequence similarity 118, member B	CR617403|FAM118B|79607|family with sequence similarity 118, member B	CR599154|FAM118B|79607|family with sequence similarity 118, member B	CR623279|FAM118B|79607|family with sequence similarity 118, member B	AK024756|FAM118B|79607|family with sequence similarity 118, member B	AK225081|FAM118B|79607|family with sequence similarity 118, member B	BC001647|FAM118B|79607|family with sequence similarity 118, member B
hg18_v1_chr1_+_115373937_115373937	0.0330275	SOX2.p2	NM_000549|TSHB|7252|thyroid stimulating hormone, beta
hg18_v1_chr1_+_23568028_23568136	0.0330088	SOX2.p2	BC054115|C1orf213|148898|chromosome 1 open reading frame 213	BC068594|C1orf213|148898|chromosome 1 open reading frame 213	AK074989|C1orf213|148898|chromosome 1 open reading frame 213
hg18_v1_chrX_+_119622012_119622119	0.0329981	SOX2.p2	BC001013|MCTS1|28985|malignant T cell amplified sequence 1	AY364258|MCTS1|28985|malignant T cell amplified sequence 1
hg18_v1_chr18_+_647674_647748	0.032903	SOX2.p2	BC002567|TYMS|7298|thymidylate synthetase	CR608281|TYMS|7298|thymidylate synthetase	BC018858|TYMS|7298|thymidylate synthetase	CR617715|TYMS|7298|thymidylate synthetase	CR607878|TYMS|7298|thymidylate synthetase	CR600251|TYMS|7298|thymidylate synthetase	CR607354|TYMS|7298|thymidylate synthetase	CR612332|TYMS|7298|thymidylate synthetase	AK292620|TYMS|7298|thymidylate synthetase	CR617359|TYMS|7298|thymidylate synthetase	CR595729|TYMS|7298|thymidylate synthetase	DQ892149|TYMS|7298|thymidylate synthetase	AB077207|TYMS|7298|thymidylate synthetase	AB077208|TYMS|7298|thymidylate synthetase	BT006811|TYMS|7298|thymidylate synthetase
hg18_v1_chr19_-_864201_864201	0.0328681	SOX2.p2	CR606082|C19orf22|91300|chromosome 19 open reading frame 22
hg18_v1_chr20_+_41628150_41628150	0.0328048	SOX2.p2	AF186470|SGK2|10110|serum/glucocorticoid regulated kinase 2	NM_016276|SGK2|10110|serum/glucocorticoid regulated kinase 2
hg18_v1_chr1_-_20986385_20986428	0.032753	SOX2.p2	AK304065|HP1BP3|50809|heterochromatin protein 1, binding protein 3
hg18_v1_chr7_-_23537968_23538210	0.0326646	SOX2.p2	DQ892442|TRA2A|29896|transformer 2 alpha homolog (Drosophila)	DQ895653|TRA2A|29896|transformer 2 alpha homolog (Drosophila)	BC069011|TRA2A|29896|transformer 2 alpha homolog (Drosophila)	BC017094|TRA2A|29896|transformer 2 alpha homolog (Drosophila)	U53209|TRA2A|29896|transformer 2 alpha homolog (Drosophila)	CR616661|TRA2A|29896|transformer 2 alpha homolog (Drosophila)	AB097048|TRA2A|29896|transformer 2 alpha homolog (Drosophila)	AK300565|TRA2A|29896|transformer 2 alpha homolog (Drosophila)	AK311687|TRA2A|29896|transformer 2 alpha homolog (Drosophila)	AK314801|TRA2A|29896|transformer 2 alpha homolog (Drosophila)	AK300741|TRA2A|29896|transformer 2 alpha homolog (Drosophila)	AK310719|TRA2A|29896|transformer 2 alpha homolog (Drosophila)	AK298815|TRA2A|29896|transformer 2 alpha homolog (Drosophila)	NM_013293|TRA2A|29896|transformer 2 alpha homolog (Drosophila)
hg18_v1_chr7_+_127883117_127883287	0.0326394	SOX2.p2	NM_001098786|C7orf68|29923|chromosome 7 open reading frame 68	NM_013332|C7orf68|29923|chromosome 7 open reading frame 68	AF144755|C7orf68|29923|chromosome 7 open reading frame 68	CR624903|C7orf68|29923|chromosome 7 open reading frame 68	CR624882|C7orf68|29923|chromosome 7 open reading frame 68	AK024729|C7orf68|29923|chromosome 7 open reading frame 68	AK222583|C7orf68|29923|chromosome 7 open reading frame 68	BC008573|C7orf68|29923|chromosome 7 open reading frame 68	BC001863|C7orf68|29923|chromosome 7 open reading frame 68	CR623904|C7orf68|29923|chromosome 7 open reading frame 68	BC093742|C7orf68|29923|chromosome 7 open reading frame 68	BC112183|C7orf68|29923|chromosome 7 open reading frame 68
hg18_v1_chr18_+_12298242_12298289	0.0325765	SOX2.p2	AK022340|TUBB6|84617|tubulin, beta 6	AK098440|TUBB6|84617|tubulin, beta 6	AK304616|TUBB6|84617|tubulin, beta 6	BC002654|TUBB6|84617|tubulin, beta 6	CR607214|TUBB6|84617|tubulin, beta 6	NM_032525|TUBB6|84617|tubulin, beta 6	AK298196|TUBB6|84617|tubulin, beta 6	CR593665|TUBB6|84617|tubulin, beta 6	CR593961|TUBB6|84617|tubulin, beta 6	CR594370|TUBB6|84617|tubulin, beta 6	DQ893486|TUBB6|84617|tubulin, beta 6	DQ896394|TUBB6|84617|tubulin, beta 6
hg18_v1_chr22_-_48607199_48607341	0.0325639	SOX2.p2	AK292428|BRD1|23774|bromodomain containing 1	BC030007|BRD1|23774|bromodomain containing 1	BC047508|BRD1|23774|bromodomain containing 1
hg18_v1_chr18_+_647633_647663	0.0325339	SOX2.p2	AB062290|TYMS|7298|thymidylate synthetase	CR605696|TYMS|7298|thymidylate synthetase	CR612901|TYMS|7298|thymidylate synthetase	AK314140|TYMS|7298|thymidylate synthetase	X02308|TYMS|7298|thymidylate synthetase	CR618525|TYMS|7298|thymidylate synthetase	CR625557|TYMS|7298|thymidylate synthetase	CR611174|TYMS|7298|thymidylate synthetase
hg18_v1_chr2_-_55131202_55131237	0.0325253	SOX2.p2	AY123246|RTN4|57142|reticulon 4	NM_020532|RTN4|57142|reticulon 4	NM_153828|RTN4|57142|reticulon 4	NM_207520|RTN4|57142|reticulon 4
hg18_v1_chr5_-_9683462_9683462	0.0324334	SOX2.p2	BC095521|TAS2R1|50834|taste receptor, type 2, member 1	NM_019599|TAS2R1|50834|taste receptor, type 2, member 1
hg18_v1_chr1_-_43410556_43410827	0.03243	SOX2.p2	AK299476|EBNA1BP2|10969|EBNA1 binding protein 2	AK295006|EBNA1BP2|10969|EBNA1 binding protein 2	NM_006824|EBNA1BP2|10969|EBNA1 binding protein 2	NM_001159936|EBNA1BP2|10969|EBNA1 binding protein 2
hg18_v1_chr11_-_47467094_47467152	0.0324107	SOX2.p2	AK304430|CELF1|10658|CUGBP, Elav-like family member 1	AJ007988|CELF1|10658|CUGBP, Elav-like family member 1	DQ893717|CELF1|10658|CUGBP, Elav-like family member 1	AF248648|CELF1|10658|CUGBP, Elav-like family member 1	NM_001025596|CELF1|10658|CUGBP, Elav-like family member 1	NM_001172640|CELF1|10658|CUGBP, Elav-like family member 1	AF267533|CELF1|10658|CUGBP, Elav-like family member 1	AF267534|CELF1|10658|CUGBP, Elav-like family member 1
hg18_v1_chr2_+_203485175_203485361	0.0323842	SOX2.p2	BC021999|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	AL834188|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	NM_001104586|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	AY032876|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	AK310640|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	AK308171|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	AK022737|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	AK295499|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	AK299366|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	AK304014|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	AK316432|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	AK295703|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	AB053310|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	NM_024744|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8
hg18_v1_chr6_-_111242883_111242939	0.0323593	SOX2.p2	BC047513|CDK19|23097|cyclin-dependent kinase 19
hg18_v1_chr1_+_149493833_149493858	0.0323527	SOX2.p2	CR622014|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	BC072008|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4
hg18_v1_chr7_+_6596183_6596468	0.0323303	SOX2.p2	BC001076|C7orf26|79034|chromosome 7 open reading frame 26	BC005121|C7orf26|79034|chromosome 7 open reading frame 26	AK056149|C7orf26|79034|chromosome 7 open reading frame 26	NM_024067|C7orf26|79034|chromosome 7 open reading frame 26	CR620057|C7orf26|79034|chromosome 7 open reading frame 26
hg18_v1_chr14_-_23623657_23623673	0.0323098	SOX2.p2	M95925|NRL|4901|neural retina leucine zipper	M81840|NRL|4901|neural retina leucine zipper	NM_006177|NRL|4901|neural retina leucine zipper	BC012395|NRL|4901|neural retina leucine zipper
hg18_v1_chr1_+_150005754_150005815	0.032268	SOX2.p2	AF175296|OAZ3|51686|ornithine decarboxylase antizyme 3	NM_016178|OAZ3|51686|ornithine decarboxylase antizyme 3	BC128558|OAZ3|51686|ornithine decarboxylase antizyme 3	BC128559|OAZ3|51686|ornithine decarboxylase antizyme 3	AY713300|OAZ3|51686|ornithine decarboxylase antizyme 3
hg18_v1_chr7_-_104949787_104950008	0.0322355	SOX2.p2	BC011396|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)	AK091283|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)	NM_019042|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)	AK128629|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)
hg18_v1_chr17_+_27838821_27838926	0.0322262	SOX2.p2	
hg18_v1_chr19_-_60941551_60941579	0.0322102	SOX2.p2	AY154464|NLRP9|338321|NLR family, pyrin domain containing 9	BC136583|NLRP9|338321|NLR family, pyrin domain containing 9	NM_176820|NLRP9|338321|NLR family, pyrin domain containing 9
hg18_v1_chr22_+_16020241_16020288	0.0322096	SOX2.p2	AF307448|CECR4|100130717|cat eye syndrome chromosome region, candidate 4 (non-protein coding)
hg18_v1_chrX_+_119268713_119268724	0.0321874	SOX2.p2	
hg18_v1_chr12_-_119391897_119391910	0.0320219	SOX2.p2	AK294254|SRSF9|8683|serine/arginine-rich splicing factor 9
hg18_v1_chr10_-_105100834_105100866	0.0319572	SOX2.p2	AK290679|PCGF6|84108|polycomb group ring finger 6
hg18_v1_chr19_-_864224_864230	0.0319074	SOX2.p2	CR596729|C19orf22|91300|chromosome 19 open reading frame 22	NM_138774|C19orf22|91300|chromosome 19 open reading frame 22	CR614472|C19orf22|91300|chromosome 19 open reading frame 22
hg18_v1_chrX_-_13247946_13248172	0.03189	SOX2.p2	AB050195|ATXN3L|92552|ataxin 3-like	BC137186|ATXN3L|92552|ataxin 3-like	BC137187|ATXN3L|92552|ataxin 3-like
hg18_v1_chr1_-_198643885_198643899	0.0318803	SOX2.p2	AK021707|ZNF281|23528|zinc finger protein 281
hg18_v1_chr8_-_60194099_60194353	0.0318729	SOX2.p2	DQ891665|TOX|9760|thymocyte selection-associated high mobility group box	DQ894852|TOX|9760|thymocyte selection-associated high mobility group box	AK000971|TOX|9760|thymocyte selection-associated high mobility group box	BC016665|TOX|9760|thymocyte selection-associated high mobility group box	AK302331|TOX|9760|thymocyte selection-associated high mobility group box	AB018351|TOX|9760|thymocyte selection-associated high mobility group box	NM_014729|TOX|9760|thymocyte selection-associated high mobility group box
hg18_v1_chr19_-_61431470_61431491	0.0318485	SOX2.p2	BC002636|ZSCAN5A|79149|zinc finger and SCAN domain containing 5A	NM_024303|ZSCAN5A|79149|zinc finger and SCAN domain containing 5A	AK098700|ZSCAN5A|79149|zinc finger and SCAN domain containing 5A
hg18_v1_chr3_+_184898234_184898398	0.0318471	SOX2.p2	AB033023|YEATS2|55689|YEATS domain containing 2	BC150273|YEATS2|55689|YEATS domain containing 2	NM_018023|YEATS2|55689|YEATS domain containing 2
hg18_v1_chr6_-_111243100_111243122	0.0318395	SOX2.p2	BC037289|CDK19|23097|cyclin-dependent kinase 19	NM_015076|CDK19|23097|cyclin-dependent kinase 19	AK292360|CDK19|23097|cyclin-dependent kinase 19
hg18_v1_chr3_-_195835593_195835712	0.0318125	SOX2.p2	AK126914|TMEM44|93109|transmembrane protein 44	BC039506|TMEM44|93109|transmembrane protein 44
hg18_v1_chr11_+_43622348_43622372	0.0316909	SOX2.p2	
hg18_v1_chr1_+_149493812_149493830	0.0316895	SOX2.p2	NM_002810|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	U24704|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4
hg18_v1_chr19_+_56506907_56506913	0.031677	SOX2.p2	NM_001101372|IGLON5|402665|IgLON family member 5
hg18_v1_chr10_-_5050191_5050206	0.031656	SOX2.p2	BC063574|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	AK091194|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	NM_001354|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	NM_205845|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)
hg18_v1_chr6_-_33862690_33862696	0.0316525	SOX2.p2	AK301083|LEMD2|221496|LEM domain containing 2	NM_001143944|LEMD2|221496|LEM domain containing 2
hg18_v1_chr5_-_24535386_24535386	0.0316374	SOX2.p2	CR615281|CDH10|1008|cadherin 10, type 2 (T2-cadherin)	NM_001190450|CDH10|1008|cadherin 10, type 2 (T2-cadherin)
hg18_v1_chrX_-_84250629_84250629	0.0315733	SOX2.p2	NM_001012980|SATL1|340562|spermidine/spermine N1-acetyl transferase-like 1
hg18_v1_chr15_-_41381744_41381744	0.0315391	SOX2.p2	AF363393|TGM7|116179|transglutaminase 7	NM_052955|TGM7|116179|transglutaminase 7
hg18_v1_chr3_+_115495522_115495565	0.0315004	SOX2.p2	EU675310|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains	NM_173799|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains	AK097192|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains	BC101288|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains	BC101289|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains	BC101290|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains	BC101291|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains
hg18_v1_chr7_-_124192916_124193149	0.0314966	SOX2.p2	BC040007|GPR37|2861|G protein-coupled receptor 37 (endothelin receptor type B-like)	NM_005302|GPR37|2861|G protein-coupled receptor 37 (endothelin receptor type B-like)
hg18_v1_chr20_-_2589476_2589596	0.0312856	SOX2.p2	AL050094|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta
hg18_v1_chr7_-_137182125_137182148	0.0312782	SOX2.p2	NM_004717|DGKI|9162|diacylglycerol kinase, iota
hg18_v1_chr7_-_128203079_128203079	0.0312386	SOX2.p2	DQ822478|OPN1SW|611|opsin 1 (cone pigments), short-wave-sensitive	NM_001708|OPN1SW|611|opsin 1 (cone pigments), short-wave-sensitive
hg18_v1_chr17_+_27838665_27838756	0.0311772	SOX2.p2	X80343|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)	BC026347|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)	BT019573|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)
hg18_v1_chrX_+_56606686_56606866	0.0311165	SOX2.p2	NM_013444|UBQLN2|29978|ubiquilin 2	BC069237|UBQLN2|29978|ubiquilin 2	AK297252|UBQLN2|29978|ubiquilin 2	AK302885|UBQLN2|29978|ubiquilin 2	AF189009|UBQLN2|29978|ubiquilin 2
hg18_v1_chr1_-_100416358_100416388	0.0310797	SOX2.p2	BC009613|LRRC39|127495|leucine rich repeat containing 39	NM_144620|LRRC39|127495|leucine rich repeat containing 39	AK096892|LRRC39|127495|leucine rich repeat containing 39	AL833417|LRRC39|127495|leucine rich repeat containing 39	BC022420|LRRC39|127495|leucine rich repeat containing 39	AY358131|LRRC39|127495|leucine rich repeat containing 39
hg18_v1_chr10_+_105716925_105716984	0.0310691	SOX2.p2	BC047885|SLK|9748|STE20-like kinase	BC064804|SLK|9748|STE20-like kinase	BC047762|SLK|9748|STE20-like kinase	BC036736|SLK|9748|STE20-like kinase	D86959|SLK|9748|STE20-like kinase
hg18_v1_chr19_-_62659665_62659707	0.0310496	SOX2.p2	AF255342|VN1R1|57191|vomeronasal 1 receptor 1	AF302903|VN1R1|57191|vomeronasal 1 receptor 1	NM_020633|VN1R1|57191|vomeronasal 1 receptor 1	BC095508|VN1R1|57191|vomeronasal 1 receptor 1
hg18_v1_chrX_-_49852397_49852403	0.0310387	SOX2.p2	AK292463|AKAP4|8852|A kinase (PRKA) anchor protein 4	BC126250|AKAP4|8852|A kinase (PRKA) anchor protein 4	BC126252|AKAP4|8852|A kinase (PRKA) anchor protein 4	NM_003886|AKAP4|8852|A kinase (PRKA) anchor protein 4	Y15195|AKAP4|8852|A kinase (PRKA) anchor protein 4
hg18_v1_chr22_-_16020153_16020167	0.031035	SOX2.p2	AF273271|CECR5|27440|cat eye syndrome chromosome region, candidate 5	CR601915|CECR5|27440|cat eye syndrome chromosome region, candidate 5	AK315156|CECR5|27440|cat eye syndrome chromosome region, candidate 5	CR606299|CECR5|27440|cat eye syndrome chromosome region, candidate 5	AK000461|CECR5|27440|cat eye syndrome chromosome region, candidate 5
hg18_v1_chrX_+_70438352_70438379	0.0309901	SOX2.p2	AF140690|ITGB1BP2|26548|integrin beta 1 binding protein (melusin) 2	NM_012278|ITGB1BP2|26548|integrin beta 1 binding protein (melusin) 2	BC108901|ITGB1BP2|26548|integrin beta 1 binding protein (melusin) 2	AF110225|ITGB1BP2|26548|integrin beta 1 binding protein (melusin) 2
hg18_v1_chr7_-_99536929_99536965	0.0309555	SOX2.p2	BC013375|MCM7|4176|minichromosome maintenance complex component 7	D86748|MCM7|4176|minichromosome maintenance complex component 7	AK096959|MCM7|4176|minichromosome maintenance complex component 7	AK314575|MCM7|4176|minichromosome maintenance complex component 7
hg18_v1_chr12_-_104002348_104002542	0.0309496	SOX2.p2	EU832777|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2	GQ129303|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2	AK095827|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2	AK300373|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2	BC103934|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2	BC103935|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2	NM_001034173|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2
hg18_v1_chr6_+_36318922_36318957	0.030875	SOX2.p2	AK096074|PNPLA1|285848|patatin-like phospholipase domain containing 1	NM_173676|PNPLA1|285848|patatin-like phospholipase domain containing 1	BC103905|PNPLA1|285848|patatin-like phospholipase domain containing 1	BC103906|PNPLA1|285848|patatin-like phospholipase domain containing 1	BC103907|PNPLA1|285848|patatin-like phospholipase domain containing 1	NM_001145716|PNPLA1|285848|patatin-like phospholipase domain containing 1
hg18_v1_chr7_-_105304159_105304283	0.0308393	SOX2.p2	AK095475|ATXN7L1|222255|ataxin 7-like 1	AK097574|ATXN7L1|222255|ataxin 7-like 1	BC030616|ATXN7L1|222255|ataxin 7-like 1	NM_020725|ATXN7L1|222255|ataxin 7-like 1	NM_152749|ATXN7L1|222255|ataxin 7-like 1
hg18_v1_chrX_+_90977115_90977159	0.0308203	SOX2.p2	AJ564931|PCDH11X|27328|protocadherin 11 X-linked	NM_001168360|PCDH11X|27328|protocadherin 11 X-linked	NM_001168361|PCDH11X|27328|protocadherin 11 X-linked	NM_001168362|PCDH11X|27328|protocadherin 11 X-linked	NM_001168363|PCDH11X|27328|protocadherin 11 X-linked	AF206516|PCDH11X|27328|protocadherin 11 X-linked	AF217288|PCDH11X|27328|protocadherin 11 X-linked	AY861432|PCDH11X|27328|protocadherin 11 X-linked	AY861433|PCDH11X|27328|protocadherin 11 X-linked	AY861434|PCDH11X|27328|protocadherin 11 X-linked	AY861435|PCDH11X|27328|protocadherin 11 X-linked
hg18_v1_chr2_-_130646415_130646527	0.0308166	SOX2.p2	BC040941|SMPD4|55627|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)
hg18_v1_chr10_+_86121526_86121671	0.0308019	SOX2.p2	AB032954|FAM190B|54462|family with sequence similarity 190, member B
hg18_v1_chr14_+_51397134_51397150	0.0307977	SOX2.p2	AL832878|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2
hg18_v1_chr17_-_77092569_77092729	0.0307083	SOX2.p2	CR603292|ACTG1|71|actin, gamma 1	CR610785|ACTG1|71|actin, gamma 1	CR608395|ACTG1|71|actin, gamma 1	CR624832|ACTG1|71|actin, gamma 1
hg18_v1_chrX_+_9392980_9393489	0.0306829	SOX2.p2	Y12781|TBL1X|6907|transducin (beta)-like 1X-linked	BC052304|TBL1X|6907|transducin (beta)-like 1X-linked	NM_005647|TBL1X|6907|transducin (beta)-like 1X-linked
hg18_v1_chr14_+_51850754_51851016	0.030629	SOX2.p2	NM_000956|PTGER2|5732|prostaglandin E receptor 2 (subtype EP2), 53kDa	U19487|PTGER2|5732|prostaglandin E receptor 2 (subtype EP2), 53kDa	BC093927|PTGER2|5732|prostaglandin E receptor 2 (subtype EP2), 53kDa	BC093929|PTGER2|5732|prostaglandin E receptor 2 (subtype EP2), 53kDa	AY275471|PTGER2|5732|prostaglandin E receptor 2 (subtype EP2), 53kDa	X83868|PTGER2|5732|prostaglandin E receptor 2 (subtype EP2), 53kDa
hg18_v1_chr1_-_203985963_203985994	0.0305646	SOX2.p2	NM_022731|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1
hg18_v1_chr12_+_5473558_5473641	0.0305464	SOX2.p2	BC069773|NTF3|4908|neurotrophin 3	NM_002527|NTF3|4908|neurotrophin 3	BC107075|NTF3|4908|neurotrophin 3	CR541906|NTF3|4908|neurotrophin 3
hg18_v1_chr3_-_14964620_14964663	0.0305271	SOX2.p2	
hg18_v1_chr6_+_122762384_122762405	0.0305243	SOX2.p2	NM_001135564|HSF2|3298|heat shock transcription factor 2	NM_004506|HSF2|3298|heat shock transcription factor 2
hg18_v1_chr16_+_75790849_75790876	0.0305036	SOX2.p2	NM_001129979|SYCE1L|100130958|synaptonemal complex central element protein 1-like
hg18_v1_chr7_-_150411345_150411502	0.0304984	SOX2.p2	NM_031434|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1	CR598305|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1	CR593449|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1	AY358481|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1	CR611070|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1	CR624473|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1
hg18_v1_chr4_-_40212670_40212760	0.0303713	SOX2.p2	AK000280|RBM47|54502|RNA binding motif protein 47	NM_019027|RBM47|54502|RNA binding motif protein 47
hg18_v1_chr6_-_90119169_90119300	0.0303471	SOX2.p2	AK290574|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast)	BC013973|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast)
hg18_v1_chr19_+_10652025_10652071	0.0302915	SOX2.p2	
hg18_v1_chr6_-_55848317_55848333	0.0301881	SOX2.p2	M60314|BMP5|653|bone morphogenetic protein 5	BC027958|BMP5|653|bone morphogenetic protein 5	NM_021073|BMP5|653|bone morphogenetic protein 5
hg18_v1_chr2_+_149119029_149119117	0.0301867	SOX2.p2	NM_015630|EPC2|26122|enhancer of polycomb homolog 2 (Drosophila)	AF286904|EPC2|26122|enhancer of polycomb homolog 2 (Drosophila)	BC093818|EPC2|26122|enhancer of polycomb homolog 2 (Drosophila)	BC093820|EPC2|26122|enhancer of polycomb homolog 2 (Drosophila)
hg18_v1_chr7_+_137795719_137795833	0.0301394	SOX2.p2	AF119042|TRIM24|8805|tripartite motif containing 24	BC028689|TRIM24|8805|tripartite motif containing 24	AF009353|TRIM24|8805|tripartite motif containing 24
hg18_v1_chr9_-_96442351_96442367	0.0301306	SOX2.p2	NM_001127628|FBP1|2203|fructose-1,6-bisphosphatase 1
hg18_v1_chr3_-_113842255_113842279	0.0300773	SOX2.p2	AB052098|CCDC80|151887|coiled-coil domain containing 80
hg18_v1_chr16_+_65701284_65701426	0.0300575	SOX2.p2	AF176088|C16orf70|80262|chromosome 16 open reading frame 70	BC004556|C16orf70|80262|chromosome 16 open reading frame 70	NM_025187|C16orf70|80262|chromosome 16 open reading frame 70
hg18_v1_chr15_-_81037554_81037627	0.0300217	SOX2.p2	BC035348|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1	AK023265|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1	AK301728|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1	AF329403|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1	NM_001079533|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1	NM_001079534|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1	NM_001079535|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1
hg18_v1_chr11_+_61005160_61005228	0.0300172	SOX2.p2	NM_001170753|C11orf66|220004|chromosome 11 open reading frame 66	NM_145017|C11orf66|220004|chromosome 11 open reading frame 66	AK057333|C11orf66|220004|chromosome 11 open reading frame 66	BC043246|C11orf66|220004|chromosome 11 open reading frame 66
hg18_v1_chr15_+_67393795_67393795	0.029991	SOX2.p2	AK000197|PAQR5|54852|progestin and adipoQ receptor family member V	AY424283|PAQR5|54852|progestin and adipoQ receptor family member V	NM_001104554|PAQR5|54852|progestin and adipoQ receptor family member V
hg18_v1_chr16_-_1772572_1772576	0.0299137	SOX2.p2	AK057850|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3
hg18_v1_chr19_+_19872700_19872869	0.0298717	SOX2.p2	NM_031218|ZNF93|81931|zinc finger protein 93	BC020837|ZNF93|81931|zinc finger protein 93	BC070372|ZNF93|81931|zinc finger protein 93	BC107581|ZNF93|81931|zinc finger protein 93	AK096342|ZNF93|81931|zinc finger protein 93	BC058821|ZNF93|81931|zinc finger protein 93	BC038096|ZNF93|81931|zinc finger protein 93	BC136718|ZNF93|81931|zinc finger protein 93	BC136719|ZNF93|81931|zinc finger protein 93
hg18_v1_chr1_+_53697659_53697732	0.029859	SOX2.p2	AK057273|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1	NM_033067|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1	AJ291671|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1
hg18_v1_chr4_-_175441192_175441426	0.0298304	SOX2.p2	AF174596|FBXO8|26269|F-box protein 8	AF233224|FBXO8|26269|F-box protein 8	CR592920|FBXO8|26269|F-box protein 8	AF115514|FBXO8|26269|F-box protein 8	AY358721|FBXO8|26269|F-box protein 8	BC014679|FBXO8|26269|F-box protein 8	CR617381|FBXO8|26269|F-box protein 8	CR620156|FBXO8|26269|F-box protein 8	CR620476|FBXO8|26269|F-box protein 8	AF201932|FBXO8|26269|F-box protein 8	AK026319|FBXO8|26269|F-box protein 8	BC040456|FBXO8|26269|F-box protein 8	AK314483|FBXO8|26269|F-box protein 8
hg18_v1_chr19_-_7607852_7607854	0.0298265	SOX2.p2	
hg18_v1_chr14_+_59020894_59021067	0.0297939	SOX2.p2	NM_001098625|JKAMP|51528|JNK1/MAPK8-associated membrane protein	NM_016475|JKAMP|51528|JNK1/MAPK8-associated membrane protein	CR605227|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AF151047|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AF161445|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AF212245|JKAMP|51528|JNK1/MAPK8-associated membrane protein	BC010359|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AK027591|JKAMP|51528|JNK1/MAPK8-associated membrane protein	BC005198|JKAMP|51528|JNK1/MAPK8-associated membrane protein	CR615396|JKAMP|51528|JNK1/MAPK8-associated membrane protein	CR596184|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AK021683|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AL136696|JKAMP|51528|JNK1/MAPK8-associated membrane protein	BX161501|JKAMP|51528|JNK1/MAPK8-associated membrane protein	CR594163|JKAMP|51528|JNK1/MAPK8-associated membrane protein	CR612457|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AK056145|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AK298209|JKAMP|51528|JNK1/MAPK8-associated membrane protein
hg18_v1_chr2_-_55131157_55131175	0.0297478	SOX2.p2	AK075039|RTN4|57142|reticulon 4
hg18_v1_chr7_+_99537065_99537424	0.0297333	SOX2.p2	NM_004722|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	AF020796|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	CR590642|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	CR611943|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	CR621800|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	Y08387|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	CR595500|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	BC018705|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	AF155158|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	AK304489|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	BC012023|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	AK315782|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	CR625474|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	AK296651|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	AK293590|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	BX640759|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit
hg18_v1_chr12_-_119391918_119391996	0.0297306	SOX2.p2	CR603096|SRSF9|8683|serine/arginine-rich splicing factor 9	NM_003769|SRSF9|8683|serine/arginine-rich splicing factor 9
hg18_v1_chr2_+_87828718_87828750	0.0297026	SOX2.p2	BC022294|PLGLB2|5342|plasminogen-like B2	M93143|PLGLB2|5342|plasminogen-like B2	NM_002665|PLGLB2|5342|plasminogen-like B2	BC005379|PLGLB2|5342|plasminogen-like B2	NM_001032392|PLGLB1|5343|plasminogen-like B1	BC070296|PLGLB1|5343|plasminogen-like B1	BC109248|PLGLB1|5343|plasminogen-like B1	BC107767|PLGLB1|5343|plasminogen-like B1
hg18_v1_chr2_+_181553783_181553926	0.0296804	SOX2.p2	CR603132|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)	AF085362|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)	BC003554|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)	AB017644|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)
hg18_v1_chr1_+_22650934_22651092	0.0296739	SOX2.p2	AB007947|ZBTB40|9923|zinc finger and BTB domain containing 40	BC114607|ZBTB40|9923|zinc finger and BTB domain containing 40
hg18_v1_chrX_+_47114925_47115010	0.0294214	SOX2.p2	U28687|ZNF157|7712|zinc finger protein 157	NM_003446|ZNF157|7712|zinc finger protein 157	BC075003|ZNF157|7712|zinc finger protein 157	EU446919|ZNF157|7712|zinc finger protein 157
hg18_v1_chr11_+_128067598_128067598	0.029414	SOX2.p2	NM_001167681|FLI1|2313|Friend leukemia virus integration 1
hg18_v1_chr8_+_7332600_7332652	0.029389	SOX2.p2	BC140937|DEFB105A|245908|defensin, beta 105A	AB089180|DEFB105A|245908|defensin, beta 105A	AF540977|DEFB105A|245908|defensin, beta 105A	BC128437|DEFB105A|245908|defensin, beta 105A	BC128438|DEFB105A|245908|defensin, beta 105A	NM_001040703|DEFB105B|504180|defensin, beta 105B	NM_152250|DEFB105A|245908|defensin, beta 105A
hg18_v1_chr11_-_85115105_85115158	0.029388	SOX2.p2	BX647671|SYTL2|54843|synaptotagmin-like 2	AK127504|SYTL2|54843|synaptotagmin-like 2	NM_206927|SYTL2|54843|synaptotagmin-like 2	NM_206928|SYTL2|54843|synaptotagmin-like 2
hg18_v1_chr5_+_140166842_140166956	0.0293335	SOX2.p2	AB208925|PCDHA4|56144|protocadherin alpha 4	NM_018907|PCDHA4|56144|protocadherin alpha 4	NM_031500|PCDHA4|56144|protocadherin alpha 4	BC112102|PCDHA4|56144|protocadherin alpha 4	BC113609|PCDHA4|56144|protocadherin alpha 4	AF152312|PCDHA4|56144|protocadherin alpha 4	AF152482|PCDHA4|56144|protocadherin alpha 4
hg18_v1_chr21_-_32026258_32026270	0.0293152	SOX2.p2	BC043353|SCAF4|57466|SR-related CTD-associated factor 4
hg18_v1_chr3_-_187124290_187124429	0.029294	SOX2.p2	AK091863|TRA2B|6434|transformer 2 beta homolog (Drosophila)
hg18_v1_chr5_-_43349249_43349328	0.0292636	SOX2.p2	BC000297|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)	BC082234|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)	X66435|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)	AK095492|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)	AK315593|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)
hg18_v1_chr8_+_98725505_98725602	0.0292596	SOX2.p2	BC045642|MTDH|92140|metadherin	NM_178812|MTDH|92140|metadherin	BC001815|MTDH|92140|metadherin
hg18_v1_chr19_+_10932719_10932781	0.0292281	SOX2.p2	CR612486|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	CR597216|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	BC035916|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
hg18_v1_chr8_-_145136125_145136202	0.0291909	SOX2.p2	BC035485|PARP10|84875|poly (ADP-ribose) polymerase family, member 10
hg18_v1_chr19_-_864194_864200	0.0291704	SOX2.p2	CR624510|C19orf22|91300|chromosome 19 open reading frame 22	BC012775|C19orf22|91300|chromosome 19 open reading frame 22
hg18_v1_chr2_+_27293846_27293921	0.0291498	SOX2.p2	D78586|CAD|790|carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase
hg18_v1_chr4_+_100651183_100651222	0.0291012	SOX2.p2	NM_032149|C4orf17|84103|chromosome 4 open reading frame 17	AK093085|C4orf17|84103|chromosome 4 open reading frame 17	AK223345|C4orf17|84103|chromosome 4 open reading frame 17	AK314711|C4orf17|84103|chromosome 4 open reading frame 17	AL136838|C4orf17|84103|chromosome 4 open reading frame 17
hg18_v1_chr20_-_118263_118321	0.0290948	SOX2.p2	AF525930|DEFB128|245939|defensin, beta 128	NM_001037732|DEFB128|245939|defensin, beta 128	BC140936|DEFB128|245939|defensin, beta 128
hg18_v1_chr11_+_737424_737427	0.0290876	SOX2.p2	BC010103|TALDO1|6888|transaldolase 1	BC009680|TALDO1|6888|transaldolase 1
hg18_v1_chr9_+_124551839_124551947	0.0290742	SOX2.p2	NM_001004453|OR1L6|392390|olfactory receptor, family 1, subfamily L, member 6
hg18_v1_chr9_-_21295311_21295311	0.0290434	SOX2.p2	BC093755|IFNA5|3442|interferon, alpha 5	BC093757|IFNA5|3442|interferon, alpha 5	NM_002169|IFNA5|3442|interferon, alpha 5
hg18_v1_chr16_-_1404635_1404723	0.0290375	SOX2.p2	AM944365|UNKL|64718|unkempt homolog (Drosophila)-like	BC011924|UNKL|64718|unkempt homolog (Drosophila)-like	AK124977|UNKL|64718|unkempt homolog (Drosophila)-like	NM_001037125|UNKL|64718|unkempt homolog (Drosophila)-like	NM_001193388|UNKL|64718|unkempt homolog (Drosophila)-like
hg18_v1_chr13_-_50315832_50316075	0.0289434	SOX2.p2	AY357595|DLEU7|220107|deleted in lymphocytic leukemia, 7	BC104892|DLEU7|220107|deleted in lymphocytic leukemia, 7	BC112009|DLEU7|220107|deleted in lymphocytic leukemia, 7	NM_198989|DLEU7|220107|deleted in lymphocytic leukemia, 7	AK126830|DLEU7|220107|deleted in lymphocytic leukemia, 7
hg18_v1_chr7_+_100515439_100515522	0.0289223	SOX2.p2	BC005847|TRIM56|81844|tripartite motif containing 56	BC048194|TRIM56|81844|tripartite motif containing 56	NM_030961|TRIM56|81844|tripartite motif containing 56	BC011882|TRIM56|81844|tripartite motif containing 56
hg18_v1_chr1_-_166372244_166372247	0.0288924	SOX2.p2	AK056040|GPR161|23432|G protein-coupled receptor 161	BC028163|GPR161|23432|G protein-coupled receptor 161	NM_153832|GPR161|23432|G protein-coupled receptor 161
hg18_v1_chr19_+_46462125_46462168	0.0288557	SOX2.p2	CR594584|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	BC009988|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1
hg18_v1_chrX_-_76928334_76928430	0.0288149	SOX2.p2	AB208928|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	AK308419|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	AK307791|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	U72936|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	U72937|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	U72938|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	NM_000489|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	NM_138270|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked
hg18_v1_chr11_+_64705989_64706042	0.0287422	SOX2.p2	BC017200|CAPN1|823|calpain 1, (mu/I) large subunit
hg18_v1_chr3_+_49543374_49543452	0.0287248	SOX2.p2	
hg18_v1_chr6_-_111242981_111243003	0.0286568	SOX2.p2	AJ420571|CDK19|23097|cyclin-dependent kinase 19
hg18_v1_chr19_+_50086299_50086349	0.0286331	SOX2.p2	NM_001128916|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	NM_001128917|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	NM_006114|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	BC047528|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	AF043250|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	CR593671|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	CR592041|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	CR599747|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	CR600311|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	CR601010|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)
hg18_v1_chr3_-_161650294_161650341	0.0285758	SOX2.p2	BC109259|TRIM59|286827|tripartite motif containing 59	BC109260|TRIM59|286827|tripartite motif containing 59	AY159379|TRIM59|286827|tripartite motif containing 59	NM_173084|TRIM59|286827|tripartite motif containing 59
hg18_v1_chr12_+_117903682_117903778	0.0284946	SOX2.p2	AK291361|SRRM4|84530|serine/arginine repetitive matrix 4	AB058756|SRRM4|84530|serine/arginine repetitive matrix 4	BC152471|SRRM4|84530|serine/arginine repetitive matrix 4	BC167162|SRRM4|84530|serine/arginine repetitive matrix 4	BC167163|SRRM4|84530|serine/arginine repetitive matrix 4	NM_194286|SRRM4|84530|serine/arginine repetitive matrix 4
hg18_v1_chr4_-_41579325_41579348	0.0284288	SOX2.p2	
hg18_v1_chrX_-_135783496_135783554	0.0283512	SOX2.p2	
hg18_v1_chrX_-_148604506_148604506	0.0283363	SOX2.p2	AK127849|MAGEA11|4110|melanoma antigen family A, 11	NM_001011544|MAGEA11|4110|melanoma antigen family A, 11
hg18_v1_chr6_-_18095831_18095859	0.0283071	SOX2.p2	BC062673|KIF13A|63971|kinesin family member 13A
hg18_v1_chr1_+_181871830_181872100	0.0282845	SOX2.p2	NM_015149|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AF186780|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	BX537416|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AK316526|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AK295179|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AK295611|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	BC136591|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1
hg18_v1_chr4_-_124063167_124063255	0.0282283	SOX2.p2	DQ893139|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6	DQ896423|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6	BC009842|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6	AB209758|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6	NM_007083|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6	AK291871|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6	AF019633|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6
hg18_v1_chr14_-_93493519_93493519	0.0282162	SOX2.p2	AB056723|ASB2|51676|ankyrin repeat and SOCS box containing 2	NM_016150|ASB2|51676|ankyrin repeat and SOCS box containing 2
hg18_v1_chr7_-_99536966_99536981	0.0281969	SOX2.p2	D55716|MCM7|4176|minichromosome maintenance complex component 7
hg18_v1_chr18_+_647666_647673	0.028189	SOX2.p2	CR616172|TYMS|7298|thymidylate synthetase	CR601110|TYMS|7298|thymidylate synthetase
hg18_v1_chr4_+_78651929_78651930	0.0281779	SOX2.p2	AF044197|CXCL13|10563|chemokine (C-X-C motif) ligand 13	NM_006419|CXCL13|10563|chemokine (C-X-C motif) ligand 13
hg18_v1_chr12_-_10893318_10893341	0.0281429	SOX2.p2	S79048|PRR4|11272|proline rich 4 (lacrimal)	AF530472|PRR4|11272|proline rich 4 (lacrimal)	BX537839|PRR4|11272|proline rich 4 (lacrimal)	AK304321|PRR4|11272|proline rich 4 (lacrimal)	AK292991|PRR4|11272|proline rich 4 (lacrimal)	AK311715|PRR4|11272|proline rich 4 (lacrimal)	BC058035|PRR4|11272|proline rich 4 (lacrimal)	AK292934|PRR4|11272|proline rich 4 (lacrimal)	NM_007244|PRR4|11272|proline rich 4 (lacrimal)
hg18_v1_chr5_+_126140949_126141098	0.0281345	SOX2.p2	DQ891592|LMNB1|4001|lamin B1	EU176582|LMNB1|4001|lamin B1
hg18_v1_chr2_-_50428395_50428457	0.0281296	SOX2.p2	AF064842|NRXN1|9378|neurexin 1	NM_138735|NRXN1|9378|neurexin 1
hg18_v1_chr3_-_58538530_58538530	0.0280759	SOX2.p2	AF035283|FAM107A|11170|family with sequence similarity 107, member A	NM_001076778|FAM107A|11170|family with sequence similarity 107, member A	NM_007177|FAM107A|11170|family with sequence similarity 107, member A
hg18_v1_chr3_+_57718067_57718418	0.028053	SOX2.p2	AY358410|SLMAP|7871|sarcolemma associated protein	NM_007159|SLMAP|7871|sarcolemma associated protein	AK124200|SLMAP|7871|sarcolemma associated protein	BC114627|SLMAP|7871|sarcolemma associated protein	BC115701|SLMAP|7871|sarcolemma associated protein
hg18_v1_chr4_+_114433551_114433586	0.0280248	SOX2.p2	AK294720|ANK2|287|ankyrin 2, neuronal
hg18_v1_chr7_+_55400890_55401255	0.0280141	SOX2.p2	AK313326|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	BC070049|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	AK225958|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	AJ278245|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	AB035966|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	AF353942|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	AK301747|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	AL713665|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	CR620619|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	CR619072|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)
hg18_v1_chr10_-_33264491_33264491	0.0279705	SOX2.p2	AM393197|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)	DQ891069|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)	DQ894251|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)	NM_033668|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)
hg18_v1_chr6_-_24985432_24985561	0.0279421	SOX2.p2	U49187|FAM65B|9750|family with sequence similarity 65, member B	AK300138|FAM65B|9750|family with sequence similarity 65, member B	BC001232|FAM65B|9750|family with sequence similarity 65, member B	NM_015864|FAM65B|9750|family with sequence similarity 65, member B
hg18_v1_chr4_-_20594645_20594809	0.0279377	SOX2.p2	DQ148492|KCNIP4|80333|Kv channel interacting protein 4	AK294188|KCNIP4|80333|Kv channel interacting protein 4
hg18_v1_chr4_+_1872150_1872179	0.0279351	SOX2.p2	AF071593|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1	AF071594|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1	NM_133334|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1	AY694128|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1
hg18_v1_chr5_+_38439399_38439406	0.0279319	SOX2.p2	AK097549|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains	NM_182798|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains	BC031251|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains	NM_182799|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains
hg18_v1_chr12_-_6586736_6586789	0.0279289	SOX2.p2	X86691|CHD4|1108|chromodomain helicase DNA binding protein 4	BC014964|CHD4|1108|chromodomain helicase DNA binding protein 4	BC025962|CHD4|1108|chromodomain helicase DNA binding protein 4	BC038596|CHD4|1108|chromodomain helicase DNA binding protein 4
hg18_v1_chr1_-_1233109_1233400	0.027866	SOX2.p2	BC051194|ACAP3|116983|ArfGAP with coiled-coil, ankyrin repeat and PH domains 3	NM_030649|ACAP3|116983|ArfGAP with coiled-coil, ankyrin repeat and PH domains 3
hg18_v1_chr13_+_23742846_23742950	0.0278536	SOX2.p2	AK297394|SPATA13|221178|spermatogenesis associated 13	AK298717|SPATA13|221178|spermatogenesis associated 13	AK123031|SPATA13|221178|spermatogenesis associated 13
hg18_v1_chr3_+_176059763_176059805	0.0278489	SOX2.p2	AJ607396|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2	AK308416|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2	AL832144|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2	NM_207015|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2	BC057243|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2
hg18_v1_chr20_-_10602429_10602710	0.0278351	SOX2.p2	BC126205|JAG1|182|jagged 1	BC126207|JAG1|182|jagged 1	AF028593|JAG1|182|jagged 1	U61276|JAG1|182|jagged 1	U73936|JAG1|182|jagged 1	BC098393|JAG1|182|jagged 1	BC028007|JAG1|182|jagged 1	AF003837|JAG1|182|jagged 1	NM_000214|JAG1|182|jagged 1
hg18_v1_chr7_-_150411504_150411571	0.0278257	SOX2.p2	AY037155|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1	BC000936|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1	NM_001136044|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1
hg18_v1_chr22_+_40724674_40724768	0.0278016	SOX2.p2	AK128138|WBP2NL|164684|WBP2 N-terminal like	NM_152613|WBP2NL|164684|WBP2 N-terminal like	AK129656|WBP2NL|164684|WBP2 N-terminal like	AK296138|WBP2NL|164684|WBP2 N-terminal like	BC022546|WBP2NL|164684|WBP2 N-terminal like	BC022549|WBP2NL|164684|WBP2 N-terminal like	CR456400|WBP2NL|164684|WBP2 N-terminal like
hg18_v1_chr22_+_48951286_48951316	0.0277803	SOX2.p2	AK299910|PANX2|56666|pannexin 2	NM_001160300|PANX2|56666|pannexin 2	NM_052839|PANX2|56666|pannexin 2	AK096019|PANX2|56666|pannexin 2	AF398510|PANX2|56666|pannexin 2	AF398511|PANX2|56666|pannexin 2	BC101023|PANX2|56666|pannexin 2
hg18_v1_chr12_-_112394259_112394259	0.0277725	SOX2.p2	AF291181|LHX5|64211|LIM homeobox 5	NM_022363|LHX5|64211|LIM homeobox 5
hg18_v1_chr4_-_5940893_5940901	0.0277592	SOX2.p2	BT006806|CRMP1|1400|collapsin response mediator protein 1	DQ892528|CRMP1|1400|collapsin response mediator protein 1	DQ895740|CRMP1|1400|collapsin response mediator protein 1
hg18_v1_chr1_+_24158898_24158969	0.0277441	SOX2.p2	AF151042|PNRC2|55629|proline-rich nuclear receptor coactivator 2	BC068475|PNRC2|55629|proline-rich nuclear receptor coactivator 2	AK311305|PNRC2|55629|proline-rich nuclear receptor coactivator 2	BC001959|PNRC2|55629|proline-rich nuclear receptor coactivator 2	BC085018|PNRC2|55629|proline-rich nuclear receptor coactivator 2	BC078177|PNRC2|55629|proline-rich nuclear receptor coactivator 2	AF374386|PNRC2|55629|proline-rich nuclear receptor coactivator 2
hg18_v1_chr11_-_62229477_62229665	0.0277384	SOX2.p2	CR590725|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)
hg18_v1_chr11_+_94439964_94440020	0.0276169	SOX2.p2	BC057783|SRSF8|10929|serine/arginine-rich splicing factor 8
hg18_v1_chr5_+_149526533_149526630	0.0276151	SOX2.p2	NM_001804|CDX1|1044|caudal type homeobox 1	AF239666|CDX1|1044|caudal type homeobox 1	U51095|CDX1|1044|caudal type homeobox 1	BC096249|CDX1|1044|caudal type homeobox 1	BC096250|CDX1|1044|caudal type homeobox 1	BC096251|CDX1|1044|caudal type homeobox 1	BC096252|CDX1|1044|caudal type homeobox 1	BC127122|CDX1|1044|caudal type homeobox 1
hg18_v1_chr13_+_27092846_27093085	0.0275725	SOX2.p2	AK307356|POLR1D|51082|polymerase (RNA) I polypeptide D, 16kDa
hg18_v1_chr16_-_47872973_47873029	0.0275633	SOX2.p2	BC093692|CBLN1|869|cerebellin 1 precursor	BC093718|CBLN1|869|cerebellin 1 precursor
hg18_v1_chr14_+_51526071_51526107	0.0275522	SOX2.p2	CR594131|C14orf166|51637|chromosome 14 open reading frame 166	EU446806|C14orf166|51637|chromosome 14 open reading frame 166	AY817175|C14orf166|51637|chromosome 14 open reading frame 166
hg18_v1_chrX_+_48252290_48252420	0.0275441	SOX2.p2	NM_022825|PORCN|64840|porcupine homolog (Drosophila)	NM_203473|PORCN|64840|porcupine homolog (Drosophila)	AK293347|PORCN|64840|porcupine homolog (Drosophila)	AK056340|PORCN|64840|porcupine homolog (Drosophila)	BC019080|PORCN|64840|porcupine homolog (Drosophila)	AK057727|PORCN|64840|porcupine homolog (Drosophila)	CR623014|PORCN|64840|porcupine homolog (Drosophila)	AK314745|PORCN|64840|porcupine homolog (Drosophila)
hg18_v1_chrX_+_71280758_71280758	0.0275311	SOX2.p2	AK126598|FLJ44635|392490|TPT1-like protein	AY572224|FLJ44635|392490|TPT1-like protein	NM_207422|FLJ44635|392490|TPT1-like protein
hg18_v1_chr5_+_72179685_72179709	0.0274363	SOX2.p2	NM_153188|TNPO1|3842|transportin 1
hg18_v1_chr6_+_30796123_30796283	0.0274252	SOX2.p2	CR611118|TUBB|203068|tubulin, beta	CR619520|TUBB|203068|tubulin, beta	CR598285|TUBB|203068|tubulin, beta	CR600934|TUBB|203068|tubulin, beta	CR601607|TUBB|203068|tubulin, beta	CR604162|TUBB|203068|tubulin, beta	CR607031|TUBB|203068|tubulin, beta	CR611872|TUBB|203068|tubulin, beta	CR612751|TUBB|203068|tubulin, beta	CR613221|TUBB|203068|tubulin, beta	BC002347|TUBB|203068|tubulin, beta	BC007605|TUBB|203068|tubulin, beta	CR592478|TUBB|203068|tubulin, beta	CR596484|TUBB|203068|tubulin, beta	CR601013|TUBB|203068|tubulin, beta	CR604556|TUBB|203068|tubulin, beta	CR604712|TUBB|203068|tubulin, beta	CR605680|TUBB|203068|tubulin, beta	CR608598|TUBB|203068|tubulin, beta	CR608834|TUBB|203068|tubulin, beta	CR613167|TUBB|203068|tubulin, beta	CR615486|TUBB|203068|tubulin, beta	CR617111|TUBB|203068|tubulin, beta	CR621812|TUBB|203068|tubulin, beta	CR626833|TUBB|203068|tubulin, beta	CR603160|TUBB|203068|tubulin, beta	CR607608|TUBB|203068|tubulin, beta	CR620946|TUBB|203068|tubulin, beta	AB062393|TUBB|203068|tubulin, beta	CR604797|TUBB|203068|tubulin, beta	CR608670|TUBB|203068|tubulin, beta	CR610589|TUBB|203068|tubulin, beta	CR612988|TUBB|203068|tubulin, beta	CR615095|TUBB|203068|tubulin, beta	CR616894|TUBB|203068|tubulin, beta	CR617779|TUBB|203068|tubulin, beta	CR623850|TUBB|203068|tubulin, beta	BC001938|TUBB|203068|tubulin, beta	BC005838|TUBB|203068|tubulin, beta	CR594368|TUBB|203068|tubulin, beta	CR595266|TUBB|203068|tubulin, beta	CR595417|TUBB|203068|tubulin, beta	CR599452|TUBB|203068|tubulin, beta	CR601344|TUBB|203068|tubulin, beta	CR602045|TUBB|203068|tubulin, beta	CR619202|TUBB|203068|tubulin, beta	CR620593|TUBB|203068|tubulin, beta	CR620764|TUBB|203068|tubulin, beta	CR591865|TUBB|203068|tubulin, beta	CR620650|TUBB|203068|tubulin, beta	CR625193|TUBB|203068|tubulin, beta	CR605815|TUBB|203068|tubulin, beta	AF070561|TUBB|203068|tubulin, beta	AF070593|TUBB|203068|tubulin, beta	BC013374|TUBB|203068|tubulin, beta	NM_178014|TUBB|203068|tubulin, beta	BC021909|TUBB|203068|tubulin, beta	BC019924|TUBB|203068|tubulin, beta	BC062532|TUBB|203068|tubulin, beta	CR591614|TUBB|203068|tubulin, beta	CR601589|TUBB|203068|tubulin, beta	CR612875|TUBB|203068|tubulin, beta	CR618338|TUBB|203068|tubulin, beta	CR626769|TUBB|203068|tubulin, beta	CR592844|TUBB|203068|tubulin, beta	CR593906|TUBB|203068|tubulin, beta	CR604912|TUBB|203068|tubulin, beta	CR611048|TUBB|203068|tubulin, beta	CR594478|TUBB|203068|tubulin, beta	CR590449|TUBB|203068|tubulin, beta	CR615318|TUBB|203068|tubulin, beta	CR606296|TUBB|203068|tubulin, beta	CR613923|TUBB|203068|tubulin, beta	CR615817|TUBB|203068|tubulin, beta	CR605898|TUBB|203068|tubulin, beta	CR595241|TUBB|203068|tubulin, beta	CR611874|TUBB|203068|tubulin, beta	CR624717|TUBB|203068|tubulin, beta	CR613213|TUBB|203068|tubulin, beta	AK297489|TUBB|203068|tubulin, beta	CR600973|TUBB|203068|tubulin, beta	DQ891742|TUBB|203068|tubulin, beta	DQ891828|TUBB|203068|tubulin, beta	DQ894920|TUBB|203068|tubulin, beta	CR596111|TUBB|203068|tubulin, beta	V00599|TUBB|203068|tubulin, beta
hg18_v1_chr1_-_41259973_41260013	0.0272824	SOX2.p2	BC022037|SLFNL1|200172|schlafen-like 1	AK292296|SLFNL1|200172|schlafen-like 1	BC037879|SLFNL1|200172|schlafen-like 1	NM_001168247|SLFNL1|200172|schlafen-like 1	AK097609|SLFNL1|200172|schlafen-like 1	NM_144990|SLFNL1|200172|schlafen-like 1
hg18_v1_chr8_-_17315386_17315410	0.0272565	SOX2.p2	NM_004686|MTMR7|9108|myotubularin related protein 7
hg18_v1_chr2_+_61243132_61243132	0.027255	SOX2.p2	NM_001143959|C2orf74|339804|chromosome 2 open reading frame 74
hg18_v1_chr10_-_105100888_105100896	0.0272443	SOX2.p2	AK309105|PCGF6|84108|polycomb group ring finger 6
hg18_v1_chr7_+_136849104_136849182	0.0272012	SOX2.p2	S64030|RPL41P5|6172|ribosomal protein L41 pseudogene 5
hg18_v1_chrX_-_74659982_74660000	0.0271872	SOX2.p2	AY358786|ZDHHC15|158866|zinc finger, DHHC-type containing 15
hg18_v1_chr19_-_55124764_55124866	0.0271591	SOX2.p2	NM_016553|NUP62|23636|nucleoporin 62kDa
hg18_v1_chr17_-_3518628_3518643	0.0270967	SOX2.p2	CR595900|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	CR615413|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3
hg18_v1_chr9_-_8723893_8723945	0.0270535	SOX2.p2	BC106713|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	BC106714|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	BC106715|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	BC106716|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	NM_001040712|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	NM_001171025|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	NM_130391|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	NM_130392|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	NM_130393|PTPRD|5789|protein tyrosine phosphatase, receptor type, D
hg18_v1_chr7_+_116289833_116289911	0.0269768	SOX2.p2	BC005338|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	CR607571|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	CR614626|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	AK293405|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	AK294409|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	AK315915|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	CR613439|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	CR590988|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	AK222989|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	AK223004|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	U03269|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	BC015963|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	CR596187|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	CR602265|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	BT006735|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	U03851|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	CR601522|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	CR603366|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2
hg18_v1_chr6_-_44388964_44389045	0.026973	SOX2.p2	AB033096|AARS2|57505|alanyl-tRNA synthetase 2, mitochondrial (putative)	BC131728|AARS2|57505|alanyl-tRNA synthetase 2, mitochondrial (putative)	NM_020745|AARS2|57505|alanyl-tRNA synthetase 2, mitochondrial (putative)
hg18_v1_chr11_-_55684368_55684368	0.026922	SOX2.p2	NM_001004058|OR8K5|219453|olfactory receptor, family 8, subfamily K, member 5
hg18_v1_chr16_-_47201588_47201646	0.0269186	SOX2.p2	BC051897|N4BP1|9683|NEDD4 binding protein 1	AB014515|N4BP1|9683|NEDD4 binding protein 1	BC152472|N4BP1|9683|NEDD4 binding protein 1	NM_153029|N4BP1|9683|NEDD4 binding protein 1
hg18_v1_chr9_-_89939719_89939719	0.0268977	SOX2.p2	AK302448|FAM75C2|645961|family with sequence similarity 75, member C2	NM_001166137|FAM75C2|645961|family with sequence similarity 75, member C2
hg18_v1_chr22_+_42908589_42908589	0.0268957	SOX2.p2	NM_001137606|PARVG|64098|parvin, gamma
hg18_v1_chr4_+_140806536_140806632	0.026878	SOX2.p2	AK307231|MGST2|4258|microsomal glutathione S-transferase 2	U77604|MGST2|4258|microsomal glutathione S-transferase 2	CR407640|MGST2|4258|microsomal glutathione S-transferase 2	DQ893384|MGST2|4258|microsomal glutathione S-transferase 2	DQ896704|MGST2|4258|microsomal glutathione S-transferase 2
hg18_v1_chr7_+_102502852_102503055	0.0268738	SOX2.p2	CR618507|ARMC10|83787|armadillo repeat containing 10	CR613957|ARMC10|83787|armadillo repeat containing 10	AF275808|ARMC10|83787|armadillo repeat containing 10
hg18_v1_chr5_-_134763464_134763480	0.0268613	SOX2.p2	BC013331|H2AFY|9555|H2A histone family, member Y	AF054174|H2AFY|9555|H2A histone family, member Y	NM_004893|H2AFY|9555|H2A histone family, member Y
hg18_v1_chr1_+_76312962_76313138	0.0268577	SOX2.p2	NM_001160011|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	NM_152996|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	AK091215|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	BC059363|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	AK297363|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	AY358540|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	AJ507291|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3
hg18_v1_chr19_+_46503524_46503529	0.0268084	SOX2.p2	CR621310|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1
hg18_v1_chr19_+_46462176_46462187	0.0267982	SOX2.p2	BC002564|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1
hg18_v1_chr18_+_30810889_30811025	0.0267646	SOX2.p2	NM_001143826|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2
hg18_v1_chr17_-_8139330_8139468	0.0267247	SOX2.p2	BC105995|SLC25A35|399512|solute carrier family 25, member 35	BC041597|SLC25A35|399512|solute carrier family 25, member 35	BC052233|SLC25A35|399512|solute carrier family 25, member 35
hg18_v1_chr3_+_157071173_157071353	0.0267212	SOX2.p2	AK315832|GMPS|8833|guanine monphosphate synthetase	U10860|GMPS|8833|guanine monphosphate synthetase	DQ896621|GMPS|8833|guanine monphosphate synthetase	EU176462|GMPS|8833|guanine monphosphate synthetase
hg18_v1_chr15_-_54997964_54998093	0.0266851	SOX2.p2	CR612225|LOC145783|145783|hypothetical LOC145783	AK096657|LOC145783|145783|hypothetical LOC145783
hg18_v1_chr5_-_142057692_142057818	0.0266598	SOX2.p2	M60515|FGF1|2246|fibroblast growth factor 1 (acidic)	AK289762|FGF1|2246|fibroblast growth factor 1 (acidic)	DQ655917|FGF1|2246|fibroblast growth factor 1 (acidic)	NM_001144934|FGF1|2246|fibroblast growth factor 1 (acidic)	NM_001144935|FGF1|2246|fibroblast growth factor 1 (acidic)
hg18_v1_chr1_+_26609819_26609857	0.0266131	SOX2.p2	BC028566|LIN28A|79727|lin-28 homolog A (C. elegans)	NM_024674|LIN28A|79727|lin-28 homolog A (C. elegans)
hg18_v1_chr17_+_28279040_28279228	0.0265978	SOX2.p2	CR608592|TMEM98|26022|transmembrane protein 98	NM_001033504|TMEM98|26022|transmembrane protein 98	NM_015544|TMEM98|26022|transmembrane protein 98	CR605381|TMEM98|26022|transmembrane protein 98	CR608363|TMEM98|26022|transmembrane protein 98	CR596801|TMEM98|26022|transmembrane protein 98	CR597844|TMEM98|26022|transmembrane protein 98	CR605299|TMEM98|26022|transmembrane protein 98
hg18_v1_chr19_-_51856129_51856292	0.0265755	SOX2.p2	BC034052|DACT3|147906|dapper, antagonist of beta-catenin, homolog 3 (Xenopus laevis)	NM_145056|DACT3|147906|dapper, antagonist of beta-catenin, homolog 3 (Xenopus laevis)
hg18_v1_chr12_-_21701985_21701999	0.0265692	SOX2.p2	CR617803|LDHB|3945|lactate dehydrogenase B	CR625734|LDHB|3945|lactate dehydrogenase B	BC071860|LDHB|3945|lactate dehydrogenase B	CR625893|LDHB|3945|lactate dehydrogenase B	NM_001174097|LDHB|3945|lactate dehydrogenase B	Y00711|LDHB|3945|lactate dehydrogenase B
hg18_v1_chr1_-_21249974_21249981	0.0265102	SOX2.p2	BC094683|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3
hg18_v1_chr8_+_61753912_61754132	0.0264766	SOX2.p2	BC053890|CHD7|55636|chromodomain helicase DNA binding protein 7	BC110818|CHD7|55636|chromodomain helicase DNA binding protein 7	BC033116|CHD7|55636|chromodomain helicase DNA binding protein 7	BC041018|CHD7|55636|chromodomain helicase DNA binding protein 7	BC014681|CHD7|55636|chromodomain helicase DNA binding protein 7	CR602498|CHD7|55636|chromodomain helicase DNA binding protein 7
hg18_v1_chr11_-_118167108_118167181	0.0264667	SOX2.p2	NM_004397|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
hg18_v1_chr7_+_55947824_55947861	0.0264113	SOX2.p2	AK097282|ZNF713|349075|zinc finger protein 713	NM_182633|ZNF713|349075|zinc finger protein 713
hg18_v1_chr19_-_14490227_14490233	0.0264026	SOX2.p2	AK312624|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1
hg18_v1_chr1_-_108588186_108588225	0.0263305	SOX2.p2	BC125161|NBPF6|653149|neuroblastoma breakpoint family, member 6	BC125162|NBPF4|148545|neuroblastoma breakpoint family, member 4	AK057395|NBPF4|148545|neuroblastoma breakpoint family, member 4	AK316438|NBPF4|148545|neuroblastoma breakpoint family, member 4	AK302318|NBPF4|148545|neuroblastoma breakpoint family, member 4	NM_001143989|NBPF4|148545|neuroblastoma breakpoint family, member 4
hg18_v1_chr13_-_47775797_47775823	0.0263283	SOX2.p2	
hg18_v1_chr10_+_121400881_121400925	0.0263202	SOX2.p2	AK222800|BAG3|9531|BCL2-associated athanogene 3	BC006418|BAG3|9531|BCL2-associated athanogene 3	AF127139|BAG3|9531|BCL2-associated athanogene 3
hg18_v1_chr3_+_180805266_180805309	0.026279	SOX2.p2	NM_002492|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa	BX648034|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa	BC005271|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa	BC009796|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa	AK313822|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa	AF047181|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa	BC093071|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa	BC017909|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa
hg18_v1_chr10_+_97749837_97749872	0.0262343	SOX2.p2	NM_001001732|CC2D2B|387707|coiled-coil and C2 domain containing 2B	NM_001159747|CC2D2B|387707|coiled-coil and C2 domain containing 2B	AK302377|CC2D2B|387707|coiled-coil and C2 domain containing 2B	BC075861|CC2D2B|387707|coiled-coil and C2 domain containing 2B
hg18_v1_chr11_+_123945102_123945298	0.0262095	SOX2.p2	BC137194|OR8A1|390275|olfactory receptor, family 8, subfamily A, member 1	BC137197|OR8A1|390275|olfactory receptor, family 8, subfamily A, member 1	NM_001005194|OR8A1|390275|olfactory receptor, family 8, subfamily A, member 1	AY726592|OR8A1|390275|olfactory receptor, family 8, subfamily A, member 1
hg18_v1_chrX_-_130251068_130251119	0.0261425	SOX2.p2	NM_001170961|IGSF1|3547|immunoglobulin superfamily, member 1	NM_001170962|IGSF1|3547|immunoglobulin superfamily, member 1	NM_001555|IGSF1|3547|immunoglobulin superfamily, member 1	NM_205833|IGSF1|3547|immunoglobulin superfamily, member 1
hg18_v1_chr17_-_7931745_7931745	0.026111	SOX2.p2	AF038461|ALOX12B|242|arachidonate 12-lipoxygenase, 12R type	NM_001139|ALOX12B|242|arachidonate 12-lipoxygenase, 12R type
hg18_v1_chr11_-_121492010_121492132	0.0260838	SOX2.p2	BC130361|BLID|414899|BH3-like motif containing, cell death inducer	BC130363|BLID|414899|BH3-like motif containing, cell death inducer	AF303179|BLID|414899|BH3-like motif containing, cell death inducer	NM_001001786|BLID|414899|BH3-like motif containing, cell death inducer
hg18_v1_chrX_-_100999204_100999204	0.0260671	SOX2.p2	AJ277654|NXF5|55998|nuclear RNA export factor 5	AJ277655|NXF5|55998|nuclear RNA export factor 5	AJ277656|NXF5|55998|nuclear RNA export factor 5	AJ277657|NXF5|55998|nuclear RNA export factor 5	AJ277658|NXF5|55998|nuclear RNA export factor 5	NM_032946|NXF5|55998|nuclear RNA export factor 5
hg18_v1_chr10_-_124595680_124595680	0.0259537	SOX2.p2	AY260047|CUZD1|50624|CUB and zona pellucida-like domains 1	AY260048|CUZD1|50624|CUB and zona pellucida-like domains 1	AY260049|CUZD1|50624|CUB and zona pellucida-like domains 1	AY260050|CUZD1|50624|CUB and zona pellucida-like domains 1	NM_022034|CUZD1|50624|CUB and zona pellucida-like domains 1
hg18_v1_chr10_-_105100880_105100887	0.0258866	SOX2.p2	BC010235|PCGF6|84108|polycomb group ring finger 6	NM_001011663|PCGF6|84108|polycomb group ring finger 6	NM_032154|PCGF6|84108|polycomb group ring finger 6
hg18_v1_chr22_+_18081968_18082117	0.0258702	SOX2.p2	CR605683|SEPT5|5413|septin 5	CR609437|SEPT5|5413|septin 5	NM_002688|SEPT5|5413|septin 5	CR608884|SEPT5|5413|septin 5	CR608991|SEPT5|5413|septin 5	BC025261|SEPT5|5413|septin 5	U74628|SEPT5|5413|septin 5	CR619352|SEPT5|5413|septin 5	CR610263|SEPT5|5413|septin 5	U85431|SEPT5|5413|septin 5	Y11593|SEPT5|5413|septin 5	CR597468|SEPT5|5413|septin 5	CR456545|SEPT5|5413|septin 5	CU013145|SEPT5|5413|septin 5	CU013433|SEPT5|5413|septin 5	AK295940|SEPT5|5413|septin 5
hg18_v1_chr12_+_47584159_47584220	0.0258543	SOX2.p2	NM_033124|CCDC65|85478|coiled-coil domain containing 65	AK302082|CCDC65|85478|coiled-coil domain containing 65	AK093051|CCDC65|85478|coiled-coil domain containing 65	AF382188|CCDC65|85478|coiled-coil domain containing 65	AK314623|CCDC65|85478|coiled-coil domain containing 65	BC039317|CCDC65|85478|coiled-coil domain containing 65
hg18_v1_chr1_-_33275039_33275050	0.0258145	SOX2.p2	BC070127|AK2|204|adenylate kinase 2	BC090040|AK2|204|adenylate kinase 2	CR615469|AK2|204|adenylate kinase 2	CR616874|AK2|204|adenylate kinase 2	CR621972|AK2|204|adenylate kinase 2	U84371|AK2|204|adenylate kinase 2	CR616468|AK2|204|adenylate kinase 2	U39945|AK2|204|adenylate kinase 2	CR590067|AK2|204|adenylate kinase 2	CR594112|AK2|204|adenylate kinase 2	AY080899|AK2|204|adenylate kinase 2	CR609421|AK2|204|adenylate kinase 2	CR620027|AK2|204|adenylate kinase 2
hg18_v1_chrX_+_30175191_30175243	0.0257865	SOX2.p2	NM_177404|MAGEB1|4112|melanoma antigen family B, 1	BC013772|MAGEB1|4112|melanoma antigen family B, 1
hg18_v1_chr1_+_36520751_36520823	0.0257729	SOX2.p2	EU446755|THRAP3|9967|thyroid hormone receptor associated protein 3
hg18_v1_chr1_+_181075104_181075163	0.0257425	SOX2.p2	AK308165|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	BC137136|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	BC144494|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	BC014246|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	AF086352|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	BC025245|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	BC008773|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	L13848|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9
hg18_v1_chr19_+_46461897_46462081	0.0257298	SOX2.p2	NM_007040|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	AJ007509|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1
hg18_v1_chr9_+_2707525_2707525	0.0256848	SOX2.p2	BC101352|KCNV2|169522|potassium channel, subfamily V, member 2	BC101353|KCNV2|169522|potassium channel, subfamily V, member 2	NM_133497|KCNV2|169522|potassium channel, subfamily V, member 2
hg18_v1_chr17_+_22982383_22982414	0.0256384	SOX2.p2	CR598297|LGALS9|3965|lectin, galactoside-binding, soluble, 9	CR604285|LGALS9|3965|lectin, galactoside-binding, soluble, 9	AB003517|LGALS9|3965|lectin, galactoside-binding, soluble, 9	AB008492|LGALS9|3965|lectin, galactoside-binding, soluble, 9
hg18_v1_chr12_-_11439752_11439764	0.0256301	SOX2.p2	BC044827|PRB1|5542|proline-rich protein BstNI subfamily 1	NM_006248|PRB2|653247|proline-rich protein BstNI subfamily 2
hg18_v1_chr6_-_27988152_27988152	0.0256096	SOX2.p2	BC136881|OR2B2|81697|olfactory receptor, family 2, subfamily B, member 2	BC136901|OR2B2|81697|olfactory receptor, family 2, subfamily B, member 2	NM_033057|OR2B2|81697|olfactory receptor, family 2, subfamily B, member 2
hg18_v1_chrX_+_46977208_46977305	0.0255738	SOX2.p2	BC140849|USP11|8237|ubiquitin specific peptidase 11	NM_004651|USP11|8237|ubiquitin specific peptidase 11
hg18_v1_chr1_-_45760115_45760195	0.0255645	SOX2.p2	CR620467|PRDX1|5052|peroxiredoxin 1	CR595111|PRDX1|5052|peroxiredoxin 1	CR592546|PRDX1|5052|peroxiredoxin 1	CR612185|PRDX1|5052|peroxiredoxin 1	X67951|PRDX1|5052|peroxiredoxin 1	L19184|PRDX1|5052|peroxiredoxin 1	AK311898|PRDX1|5052|peroxiredoxin 1	BC007063|PRDX1|5052|peroxiredoxin 1	AK131049|PRDX1|5052|peroxiredoxin 1	BC021683|PRDX1|5052|peroxiredoxin 1	NM_002574|PRDX1|5052|peroxiredoxin 1	NM_181696|PRDX1|5052|peroxiredoxin 1	NM_181697|PRDX1|5052|peroxiredoxin 1
hg18_v1_chr3_-_11598829_11598837	0.0255395	SOX2.p2	AK307708|VGLL4|9686|vestigial like 4 (Drosophila)	NM_001128220|VGLL4|9686|vestigial like 4 (Drosophila)
hg18_v1_chr13_+_112349358_112349358	0.0255292	SOX2.p2	AK129953|C13orf35|400165|chromosome 13 open reading frame 35	NM_207440|C13orf35|400165|chromosome 13 open reading frame 35
hg18_v1_chr1_+_10412745_10412745	0.0255067	SOX2.p2	AF521016|APITD1-CORT|100526739|APITD1-CORT readthrough	NM_198544|APITD1-CORT|100526739|APITD1-CORT readthrough	NM_199006|APITD1-CORT|100526739|APITD1-CORT readthrough	NM_199294|APITD1|378708|apoptosis-inducing, TAF9-like domain 1
hg18_v1_chr2_+_181553333_181553608	0.0254688	SOX2.p2	NM_182678|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)	CR624412|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)	CR607535|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)	CR622410|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)	CR621773|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)	NM_006357|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)
hg18_v1_chr3_+_108578877_108579124	0.025464	SOX2.p2	AK058091|CCDC54|84692|coiled-coil domain containing 54	NM_032600|CCDC54|84692|coiled-coil domain containing 54	BC030780|CCDC54|84692|coiled-coil domain containing 54	AF367469|CCDC54|84692|coiled-coil domain containing 54	DQ890829|CCDC54|84692|coiled-coil domain containing 54	DQ890830|CCDC54|84692|coiled-coil domain containing 54	DQ893985|CCDC54|84692|coiled-coil domain containing 54
hg18_v1_chr11_+_440260_440333	0.0254091	SOX2.p2	BC001210|PTDSS2|81490|phosphatidylserine synthase 2	NM_030783|PTDSS2|81490|phosphatidylserine synthase 2
hg18_v1_chr9_-_97309507_97309535	0.0253736	SOX2.p2	NM_001083606|PTCH1|5727|patched 1	U43148|PTCH1|5727|patched 1
hg18_v1_chr19_+_46207335_46207421	0.0252017	SOX2.p2	X06399|CYP2B6|1555|cytochrome P450, family 2, subfamily B, polypeptide 6
hg18_v1_chr5_-_36912487_36912554	0.0251809	SOX2.p2	AK000901|LOC646719|646719|hypothetical LOC646719
hg18_v1_chr4_-_106849252_106849329	0.02518	SOX2.p2	BC014442|INTS12|57117|integrator complex subunit 12	AK314939|INTS12|57117|integrator complex subunit 12	NM_001142471|INTS12|57117|integrator complex subunit 12	NM_020395|INTS12|57117|integrator complex subunit 12
hg18_v1_chr1_+_36046373_36046442	0.0251793	SOX2.p2	AB046787|EIF2C4|192670|eukaryotic translation initiation factor 2C, 4	BC152450|EIF2C4|192670|eukaryotic translation initiation factor 2C, 4	NM_017629|EIF2C4|192670|eukaryotic translation initiation factor 2C, 4
hg18_v1_chr19_+_13767207_13767284	0.0251591	SOX2.p2	AK024452|ZSWIM4|65249|zinc finger, SWIM-type containing 4	NM_023072|ZSWIM4|65249|zinc finger, SWIM-type containing 4
hg18_v1_chr4_+_88961573_88961586	0.0251517	SOX2.p2	AK075076|MEPE|56955|matrix extracellular phosphoglycoprotein	NM_001184694|MEPE|56955|matrix extracellular phosphoglycoprotein
hg18_v1_chr18_-_42751305_42751518	0.0251064	SOX2.p2	AF077953|PIAS2|9063|protein inhibitor of activated STAT, 2	AF077954|PIAS2|9063|protein inhibitor of activated STAT, 2	DQ896421|PIAS2|9063|protein inhibitor of activated STAT, 2	EU176432|PIAS2|9063|protein inhibitor of activated STAT, 2	AK308143|PIAS2|9063|protein inhibitor of activated STAT, 2	BC111060|PIAS2|9063|protein inhibitor of activated STAT, 2	BC015190|PIAS2|9063|protein inhibitor of activated STAT, 2	NM_004671|PIAS2|9063|protein inhibitor of activated STAT, 2	NM_173206|PIAS2|9063|protein inhibitor of activated STAT, 2	AK294801|PIAS2|9063|protein inhibitor of activated STAT, 2
hg18_v1_chr4_+_140806371_140806509	0.0250424	SOX2.p2	NM_002413|MGST2|4258|microsomal glutathione S-transferase 2	AK130948|MGST2|4258|microsomal glutathione S-transferase 2	BC025416|MGST2|4258|microsomal glutathione S-transferase 2
hg18_v1_chr19_-_864138_864189	0.025037	SOX2.p2	CR608111|C19orf22|91300|chromosome 19 open reading frame 22	CR615271|C19orf22|91300|chromosome 19 open reading frame 22	CR592767|C19orf22|91300|chromosome 19 open reading frame 22	CR617180|C19orf22|91300|chromosome 19 open reading frame 22	CR617940|C19orf22|91300|chromosome 19 open reading frame 22	CR599301|C19orf22|91300|chromosome 19 open reading frame 22	CR597374|C19orf22|91300|chromosome 19 open reading frame 22
hg18_v1_chr8_+_79591074_79591204	0.0250319	SOX2.p2	CR607441|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha	CR623358|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha	CR610811|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha	CR602843|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha	CR614267|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha
hg18_v1_chr11_-_6773589_6773714	0.0249828	SOX2.p2	BC101489|OR6A2|8590|olfactory receptor, family 6, subfamily A, member 2	BC101491|OR6A2|8590|olfactory receptor, family 6, subfamily A, member 2	NM_003696|OR6A2|8590|olfactory receptor, family 6, subfamily A, member 2
hg18_v1_chr14_+_51397166_51397206	0.0249805	SOX2.p2	BC020774|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2
hg18_v1_chr19_+_63237211_63237285	0.0249782	SOX2.p2	BC107729|ZSCAN1|284312|zinc finger and SCAN domain containing 1	AK091098|ZSCAN1|284312|zinc finger and SCAN domain containing 1	NM_182572|ZSCAN1|284312|zinc finger and SCAN domain containing 1	AY280370|ZSCAN1|284312|zinc finger and SCAN domain containing 1	BC048099|ZSCAN1|284312|zinc finger and SCAN domain containing 1
hg18_v1_chr8_-_30635112_30635132	0.0249696	SOX2.p2	CR611388|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa
hg18_v1_chr16_+_8714687_8714719	0.0249311	SOX2.p2	AK054834|ABAT|18|4-aminobutyrate aminotransferase
hg18_v1_chr7_-_50740491_50740491	0.0249262	SOX2.p2	NM_001001550|GRB10|2887|growth factor receptor-bound protein 10	U66065|GRB10|2887|growth factor receptor-bound protein 10	U69276|GRB10|2887|growth factor receptor-bound protein 10
hg18_v1_chr5_-_133775491_133775506	0.0248865	SOX2.p2	NM_080656|CDKN2AIPNL|91368|CDKN2A interacting protein N-terminal like
hg18_v1_chr3_-_55496607_55496709	0.0248567	SOX2.p2	AK090582|WNT5A|7474|wingless-type MMTV integration site family, member 5A
hg18_v1_chr12_-_56432292_56432374	0.0248429	SOX2.p2	U79269|CDK4|1019|cyclin-dependent kinase 4	AK313701|CDK4|1019|cyclin-dependent kinase 4	CR591116|CDK4|1019|cyclin-dependent kinase 4	Z48970|CDK4|1019|cyclin-dependent kinase 4	BC003644|CDK4|1019|cyclin-dependent kinase 4	CR598582|CDK4|1019|cyclin-dependent kinase 4	BC010153|CDK4|1019|cyclin-dependent kinase 4	CR590586|CDK4|1019|cyclin-dependent kinase 4	CR616342|CDK4|1019|cyclin-dependent kinase 4	CR608247|CDK4|1019|cyclin-dependent kinase 4	CR594194|CDK4|1019|cyclin-dependent kinase 4
hg18_v1_chrX_-_13866366_13866425	0.0248228	SOX2.p2	
hg18_v1_chr12_-_110378240_110378372	0.0247606	SOX2.p2	
hg18_v1_chr4_+_151218862_151219088	0.024754	SOX2.p2	AB209181|DCLK2|166614|doublecortin-like kinase 2	NM_001040260|DCLK2|166614|doublecortin-like kinase 2	NM_001040261|DCLK2|166614|doublecortin-like kinase 2
hg18_v1_chr8_+_87180248_87180273	0.024747	SOX2.p2	BC065207|ATP6V0D2|245972|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2	AK096027|ATP6V0D2|245972|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2	NM_152565|ATP6V0D2|245972|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2	AY079172|ATP6V0D2|245972|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2
hg18_v1_chr2_-_39517795_39517815	0.0247373	SOX2.p2	BC060880|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3
hg18_v1_chr22_-_16020168_16020190	0.0245775	SOX2.p2	NM_033070|CECR5|27440|cat eye syndrome chromosome region, candidate 5
hg18_v1_chr19_+_977627_977697	0.0245557	SOX2.p2	AK024835|CNN2|1265|calponin 2	AK057960|CNN2|1265|calponin 2	AK293171|CNN2|1265|calponin 2	BC141818|CNN2|1265|calponin 2	BC141833|CNN2|1265|calponin 2	CR598250|CNN2|1265|calponin 2	D83735|CNN2|1265|calponin 2	AK222924|CNN2|1265|calponin 2	CR611249|CNN2|1265|calponin 2	CR615042|CNN2|1265|calponin 2	CR618608|CNN2|1265|calponin 2	AK300788|CNN2|1265|calponin 2	CR592852|CNN2|1265|calponin 2	D86059|CNN2|1265|calponin 2	BC148264|CNN2|1265|calponin 2	CR541810|CNN2|1265|calponin 2	CR541831|CNN2|1265|calponin 2	CR606476|CNN2|1265|calponin 2	AY927514|CNN2|1265|calponin 2
hg18_v1_chrX_+_153318662_153318794	0.0245512	SOX2.p2	AK294893|GDI1|2664|GDP dissociation inhibitor 1	AK295306|GDI1|2664|GDP dissociation inhibitor 1	AK303248|GDI1|2664|GDP dissociation inhibitor 1	AL833629|GDI1|2664|GDP dissociation inhibitor 1	AK090746|GDI1|2664|GDP dissociation inhibitor 1	BC012201|GDI1|2664|GDP dissociation inhibitor 1	X79353|GDI1|2664|GDP dissociation inhibitor 1	BC000317|GDI1|2664|GDP dissociation inhibitor 1	D45021|GDI1|2664|GDP dissociation inhibitor 1	AF400433|GDI1|2664|GDP dissociation inhibitor 1	AM392660|GDI1|2664|GDP dissociation inhibitor 1	AM393226|GDI1|2664|GDP dissociation inhibitor 1	AM393601|GDI1|2664|GDP dissociation inhibitor 1	DQ892049|GDI1|2664|GDP dissociation inhibitor 1	DQ895243|GDI1|2664|GDP dissociation inhibitor 1	DQ896843|GDI1|2664|GDP dissociation inhibitor 1	AB102647|GDI1|2664|GDP dissociation inhibitor 1	BT019884|GDI1|2664|GDP dissociation inhibitor 1	CR542258|GDI1|2664|GDP dissociation inhibitor 1	CR542276|GDI1|2664|GDP dissociation inhibitor 1
hg18_v1_chr11_+_125730822_125730878	0.0244665	SOX2.p2	CR605032|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4
hg18_v1_chr3_+_157875063_157875129	0.0244562	SOX2.p2	AK291261|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase	BX537965|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase	BC050350|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase
hg18_v1_chr5_-_14706486_14706500	0.0243883	SOX2.p2	
hg18_v1_chr7_+_73709991_73710126	0.0243567	SOX2.p2	BC099907|GTF2I|2969|general transcription factor IIi	AK294935|GTF2I|2969|general transcription factor IIi	AF035737|GTF2I|2969|general transcription factor IIi	AF038967|GTF2I|2969|general transcription factor IIi	AF038968|GTF2I|2969|general transcription factor IIi	AF038969|GTF2I|2969|general transcription factor IIi
hg18_v1_chr1_+_149493861_149493886	0.0243237	SOX2.p2	AB033605|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	BC002365|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	CR609650|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	CR595476|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	CR608712|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	CR626776|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	CR611554|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	CR616606|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4
hg18_v1_chr2_-_39517633_39517794	0.0243184	SOX2.p2	EU832785|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3	GQ129258|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3	NM_003618|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3	AK314487|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3
hg18_v1_chr3_-_15515382_15515382	0.0242568	SOX2.p2	AK128401|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	NM_080538|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase
hg18_v1_chr19_-_2691009_2691047	0.0241881	SOX2.p2	AK302600|SLC39A3|29985|solute carrier family 39 (zinc transporter), member 3	BC020571|SLC39A3|29985|solute carrier family 39 (zinc transporter), member 3	CR618109|SLC39A3|29985|solute carrier family 39 (zinc transporter), member 3	AK002044|SLC39A3|29985|solute carrier family 39 (zinc transporter), member 3
hg18_v1_chr1_-_23758871_23758908	0.0241705	SOX2.p2	X69111|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	NM_002167|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein
hg18_v1_chr11_-_5662762_5662917	0.0241238	SOX2.p2	BC021258|TRIM5|85363|tripartite motif containing 5	CR616862|TRIM5|85363|tripartite motif containing 5	BX647152|TRIM5|85363|tripartite motif containing 5	AK027593|TRIM5|85363|tripartite motif containing 5	NM_033034|TRIM5|85363|tripartite motif containing 5	NM_033092|TRIM5|85363|tripartite motif containing 5	NM_033093|TRIM5|85363|tripartite motif containing 5
hg18_v1_chr2_-_203485193_203485193	0.0240867	SOX2.p2	AK056092|WDR12|55759|WD repeat domain 12	NM_018256|WDR12|55759|WD repeat domain 12
hg18_v1_chr22_+_18485145_18485170	0.0240635	SOX2.p2	CU013156|RANBP1|5902|RAN binding protein 1	CU013444|RANBP1|5902|RAN binding protein 1
hg18_v1_chr2_+_26110888_26111054	0.0240564	SOX2.p2	AF086917|RAB10|10890|RAB10, member RAS oncogene family	AF106681|RAB10|10890|RAB10, member RAS oncogene family	BC000896|RAB10|10890|RAB10, member RAS oncogene family	AF297660|RAB10|10890|RAB10, member RAS oncogene family	AF498945|RAB10|10890|RAB10, member RAS oncogene family	CR457303|RAB10|10890|RAB10, member RAS oncogene family	EU831649|RAB10|10890|RAB10, member RAS oncogene family	EU831733|RAB10|10890|RAB10, member RAS oncogene family	AF091032|RAB10|10890|RAB10, member RAS oncogene family
hg18_v1_chr19_+_56766342_56766376	0.0240314	SOX2.p2	NM_007147|ZNF175|7728|zinc finger protein 175	BC007778|ZNF175|7728|zinc finger protein 175	AK292687|ZNF175|7728|zinc finger protein 175	BC052997|ZNF175|7728|zinc finger protein 175	D50419|ZNF175|7728|zinc finger protein 175
hg18_v1_chr11_+_116608447_116608839	0.0240309	SOX2.p2	NM_207343|RNF214|257160|ring finger protein 214	AK298923|RNF214|257160|ring finger protein 214	BC064581|RNF214|257160|ring finger protein 214	AK300160|RNF214|257160|ring finger protein 214	BC146891|RNF214|257160|ring finger protein 214	BC146901|RNF214|257160|ring finger protein 214	NM_001077239|RNF214|257160|ring finger protein 214
hg18_v1_chr6_+_31815703_31815845	0.0239841	SOX2.p2	NM_002441|MSH5|4439|mutS homolog 5 (E. coli)	NM_025259|MSH5|4439|mutS homolog 5 (E. coli)	NM_172165|MSH5|4439|mutS homolog 5 (E. coli)	NM_172166|MSH5|4439|mutS homolog 5 (E. coli)	AF070071|MSH5|4439|mutS homolog 5 (E. coli)	AK304221|MSH5|4439|mutS homolog 5 (E. coli)	AF034759|MSH5|4439|mutS homolog 5 (E. coli)	AJ245661|MSH5-C6ORF26|100532732|MSH5-C6orf26 read-through transcript	BC001358|MSH5|4439|mutS homolog 5 (E. coli)	BC002498|MSH5|4439|mutS homolog 5 (E. coli)	BC041031|MSH5|4439|mutS homolog 5 (E. coli)	AF048986|MSH5|4439|mutS homolog 5 (E. coli)
hg18_v1_chr12_+_109390586_109390798	0.023977	SOX2.p2	AK296280|C12orf24|29902|chromosome 12 open reading frame 24	AK297684|C12orf24|29902|chromosome 12 open reading frame 24	NM_013300|C12orf24|29902|chromosome 12 open reading frame 24	CR623722|C12orf24|29902|chromosome 12 open reading frame 24	AK225731|C12orf24|29902|chromosome 12 open reading frame 24	CR602160|C12orf24|29902|chromosome 12 open reading frame 24	CR623239|C12orf24|29902|chromosome 12 open reading frame 24	U79274|C12orf24|29902|chromosome 12 open reading frame 24	BC020967|C12orf24|29902|chromosome 12 open reading frame 24
hg18_v1_chr4_-_152155827_152155909	0.023966	SOX2.p2	AF467287|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing	BC064834|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing
hg18_v1_chr2_-_170138558_170138669	0.0239015	SOX2.p2	AL832058|FASTKD1|79675|FAST kinase domains 1	AK074302|FASTKD1|79675|FAST kinase domains 1	BC017950|FASTKD1|79675|FAST kinase domains 1	AK055892|FASTKD1|79675|FAST kinase domains 1	AK130797|FASTKD1|79675|FAST kinase domains 1	BC035241|FASTKD1|79675|FAST kinase domains 1	NM_024622|FASTKD1|79675|FAST kinase domains 1
hg18_v1_chr19_+_2115119_2115157	0.0238853	SOX2.p2	AF509504|DOT1L|84444|DOT1-like, histone H3 methyltransferase (S. cerevisiae)	NM_032482|DOT1L|84444|DOT1-like, histone H3 methyltransferase (S. cerevisiae)
hg18_v1_chr17_-_20886680_20887049	0.0238547	SOX2.p2	AB028986|USP22|23326|ubiquitin specific peptidase 22	NM_015276|USP22|23326|ubiquitin specific peptidase 22
hg18_v1_chr17_+_41457394_41457437	0.0238532	SOX2.p2	AB073354|MAPT|4137|microtubule-associated protein tau
hg18_v1_chr2_+_172530120_172530246	0.023818	SOX2.p2	CR592532|HAT1|8520|histone acetyltransferase 1	BC018682|HAT1|8520|histone acetyltransferase 1
hg18_v1_chr9_-_135922912_135923117	0.0236728	SOX2.p2	D26362|BRD3|8019|bromodomain containing 3	BC010699|BRD3|8019|bromodomain containing 3	NM_007371|BRD3|8019|bromodomain containing 3
hg18_v1_chr19_+_46462169_46462170	0.0236629	SOX2.p2	AK291315|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1
hg18_v1_chr5_-_171643399_171643442	0.0236348	SOX2.p2	NM_152277|UBTD2|92181|ubiquitin domain containing 2
hg18_v1_chr21_+_30895276_30895310	0.0235898	SOX2.p2	AB096953|KRTAP22-1|337979|keratin associated protein 22-1	BC101682|KRTAP22-1|337979|keratin associated protein 22-1	BC101686|KRTAP22-1|337979|keratin associated protein 22-1	NM_181620|KRTAP22-1|337979|keratin associated protein 22-1
hg18_v1_chr10_-_102035938_102036103	0.023585	SOX2.p2	BC020494|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2	AY278457|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2	AK054697|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2	NM_001001342|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2
hg18_v1_chr5_+_138116972_138117015	0.0235646	SOX2.p2	NM_001903|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	AK296708|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	AK300439|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	D14705|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa
hg18_v1_chr7_+_23603495_23603585	0.0235545	SOX2.p2	NM_138771|CCDC126|90693|coiled-coil domain containing 126	AK289911|CCDC126|90693|coiled-coil domain containing 126	AY358713|CCDC126|90693|coiled-coil domain containing 126
hg18_v1_chr11_+_4571844_4571844	0.023554	SOX2.p2	NM_001005169|OR52I1|390037|olfactory receptor, family 52, subfamily I, member 1
hg18_v1_chr10_-_13429397_13429798	0.0235385	SOX2.p2	CR604492|SEPHS1|22929|selenophosphate synthetase 1
hg18_v1_chr22_-_21814208_21814279	0.0235247	SOX2.p2	BC008986|RTDR1|27156|rhabdoid tumor deletion region gene 1	AF133587|RTDR1|27156|rhabdoid tumor deletion region gene 1	NM_014433|RTDR1|27156|rhabdoid tumor deletion region gene 1	AK299530|RTDR1|27156|rhabdoid tumor deletion region gene 1	AK310327|RTDR1|27156|rhabdoid tumor deletion region gene 1
hg18_v1_chr6_+_43845915_43846077	0.0234977	SOX2.p2	NM_001025366|VEGFA|7422|vascular endothelial growth factor A	NM_001025367|VEGFA|7422|vascular endothelial growth factor A	NM_001025368|VEGFA|7422|vascular endothelial growth factor A	NM_001025369|VEGFA|7422|vascular endothelial growth factor A	NM_001025370|VEGFA|7422|vascular endothelial growth factor A	NM_001033756|VEGFA|7422|vascular endothelial growth factor A	NM_001171622|VEGFA|7422|vascular endothelial growth factor A	NM_001171623|VEGFA|7422|vascular endothelial growth factor A	NM_001171624|VEGFA|7422|vascular endothelial growth factor A	NM_001171625|VEGFA|7422|vascular endothelial growth factor A	NM_001171626|VEGFA|7422|vascular endothelial growth factor A	NM_001171627|VEGFA|7422|vascular endothelial growth factor A	NM_001171628|VEGFA|7422|vascular endothelial growth factor A	NM_001171629|VEGFA|7422|vascular endothelial growth factor A	NM_001171630|VEGFA|7422|vascular endothelial growth factor A	NM_003376|VEGFA|7422|vascular endothelial growth factor A	BC058855|VEGFA|7422|vascular endothelial growth factor A	BC019867|VEGFA|7422|vascular endothelial growth factor A
hg18_v1_chr6_-_52736231_52736319	0.0234597	SOX2.p2	AK292602|GSTA2|2939|glutathione S-transferase alpha 2	AK313601|GSTA2|2939|glutathione S-transferase alpha 2	M16594|GSTA2|2939|glutathione S-transferase alpha 2	BC002895|GSTA2|2939|glutathione S-transferase alpha 2	NM_000846|GSTA2|2939|glutathione S-transferase alpha 2
hg18_v1_chr11_-_88864061_88864380	0.0234245	SOX2.p2	AF261943|NOX4|50507|NADPH oxidase 4	AJ704725|NOX4|50507|NADPH oxidase 4	AJ704726|NOX4|50507|NADPH oxidase 4	AJ704727|NOX4|50507|NADPH oxidase 4	AJ704728|NOX4|50507|NADPH oxidase 4	AJ704729|NOX4|50507|NADPH oxidase 4	AY288918|NOX4|50507|NADPH oxidase 4	AK311389|NOX4|50507|NADPH oxidase 4	BC040105|NOX4|50507|NADPH oxidase 4	AK291830|NOX4|50507|NADPH oxidase 4	AK298376|NOX4|50507|NADPH oxidase 4	AF254621|NOX4|50507|NADPH oxidase 4	AB041035|NOX4|50507|NADPH oxidase 4	NM_001143836|NOX4|50507|NADPH oxidase 4	NM_016931|NOX4|50507|NADPH oxidase 4	BC051371|NOX4|50507|NADPH oxidase 4
hg18_v1_chr4_+_123967265_123967323	0.0233777	SOX2.p2	J04513|FGF2|2247|fibroblast growth factor 2 (basic)	NM_002006|FGF2|2247|fibroblast growth factor 2 (basic)	BC111737|FGF2|2247|fibroblast growth factor 2 (basic)
hg18_v1_chr6_+_123359076_123359088	0.0233647	SOX2.p2	AK295158|CLVS2|134829|clavesin 2
hg18_v1_chr5_-_41546384_41546486	0.0233617	SOX2.p2	AK127142|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3	BX648329|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3	NM_001005473|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3
hg18_v1_chr7_-_122985060_122985193	0.0233485	SOX2.p2	CR933664|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa	BT006695|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa	AK022209|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa	CR606314|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa	BC020821|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa	BC070236|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa	BC070237|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa	U64028|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa	AK315458|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa	U53468|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa	BC000813|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa	NM_005000|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa
hg18_v1_chr3_-_187138342_187138468	0.0233235	SOX2.p2	DQ890937|TRA2B|6434|transformer 2 beta homolog (Drosophila)	EU176532|TRA2B|6434|transformer 2 beta homolog (Drosophila)	CR603112|TRA2B|6434|transformer 2 beta homolog (Drosophila)	U61267|TRA2B|6434|transformer 2 beta homolog (Drosophila)	CR590258|TRA2B|6434|transformer 2 beta homolog (Drosophila)	CR608950|TRA2B|6434|transformer 2 beta homolog (Drosophila)	U68063|TRA2B|6434|transformer 2 beta homolog (Drosophila)	AK301118|TRA2B|6434|transformer 2 beta homolog (Drosophila)	BC005898|TRA2B|6434|transformer 2 beta homolog (Drosophila)
hg18_v1_chr14_+_90650109_90650208	0.023323	SOX2.p2	NM_001102366|C14orf159|80017|chromosome 14 open reading frame 159	NM_001102368|C14orf159|80017|chromosome 14 open reading frame 159	NM_001102369|C14orf159|80017|chromosome 14 open reading frame 159	NM_024952|C14orf159|80017|chromosome 14 open reading frame 159	AK097294|C14orf159|80017|chromosome 14 open reading frame 159	AK098752|C14orf159|80017|chromosome 14 open reading frame 159	BX537970|C14orf159|80017|chromosome 14 open reading frame 159	BX161393|C14orf159|80017|chromosome 14 open reading frame 159	BX247989|C14orf159|80017|chromosome 14 open reading frame 159	BC009182|C14orf159|80017|chromosome 14 open reading frame 159	AK308857|C14orf159|80017|chromosome 14 open reading frame 159	AB210031|C14orf159|80017|chromosome 14 open reading frame 159
hg18_v1_chr5_+_126140746_126140817	0.023307	SOX2.p2	AK312603|LMNB1|4001|lamin B1	M34458|LMNB1|4001|lamin B1	CR609276|LMNB1|4001|lamin B1	BC012295|LMNB1|4001|lamin B1	BC078178|LMNB1|4001|lamin B1
hg18_v1_chr7_-_122627235_122627260	0.0232746	SOX2.p2	AK026413|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1	AK314537|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1	AF260824|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1	BC111775|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1	NM_022444|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1
hg18_v1_chr20_+_54533191_54533230	0.0232192	SOX2.p2	CR624258|C20orf106|200232|chromosome 20 open reading frame 106	NM_001012971|C20orf106|200232|chromosome 20 open reading frame 106	BC029411|C20orf106|200232|chromosome 20 open reading frame 106	BC105792|C20orf107|388799|chromosome 20 open reading frame 107	BC107704|C20orf106|200232|chromosome 20 open reading frame 106	BC070179|C20orf106|200232|chromosome 20 open reading frame 106
hg18_v1_chr7_+_73709943_73709972	0.0231837	SOX2.p2	AK292832|GTF2I|2969|general transcription factor IIi	AF015553|GTF2I|2969|general transcription factor IIi	NM_001163636|GTF2I|2969|general transcription factor IIi	NM_001518|GTF2I|2969|general transcription factor IIi	NM_032999|GTF2I|2969|general transcription factor IIi	NM_033000|GTF2I|2969|general transcription factor IIi	NM_033001|GTF2I|2969|general transcription factor IIi
hg18_v1_chr10_+_17312654_17312716	0.0231837	SOX2.p2	CR609103|VIM|7431|vimentin
hg18_v1_chr11_+_58888460_58888507	0.0231534	SOX2.p2	BC140917|OR5AN1|390195|olfactory receptor, family 5, subfamily AN, member 1	NM_001004729|OR5AN1|390195|olfactory receptor, family 5, subfamily AN, member 1
hg18_v1_chr6_+_152053323_152053425	0.0231445	SOX2.p2	NM_001122742|ESR1|2099|estrogen receptor 1	U68068|ESR1|2099|estrogen receptor 1	AK309580|ESR1|2099|estrogen receptor 1
hg18_v1_chr4_-_76868581_76868818	0.0231359	SOX2.p2	
hg18_v1_chr1_+_179269689_179269760	0.0230954	SOX2.p2	AK304645|MR1|3140|major histocompatibility complex, class I-related	AK290374|MR1|3140|major histocompatibility complex, class I-related	AK222910|MR1|3140|major histocompatibility complex, class I-related	CR602405|MR1|3140|major histocompatibility complex, class I-related
hg18_v1_chr14_-_19553191_19553191	0.0230898	SOX2.p2	NM_001004712|OR4K14|122740|olfactory receptor, family 4, subfamily K, member 14
hg18_v1_chr21_+_34658192_34658241	0.0230845	SOX2.p2	AF302095|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2	DQ192290|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2	NM_172201|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2	BC112087|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2	BC093892|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2
hg18_v1_chr12_+_115833093_115833245	0.0230618	SOX2.p2	BC037296|FBXW8|26259|F-box and WD repeat domain containing 8	NM_012174|FBXW8|26259|F-box and WD repeat domain containing 8	NM_153348|FBXW8|26259|F-box and WD repeat domain containing 8	AK289621|FBXW8|26259|F-box and WD repeat domain containing 8	AF176707|FBXW8|26259|F-box and WD repeat domain containing 8
hg18_v1_chr1_-_101132833_101132878	0.0230544	SOX2.p2	BC014910|EXTL2|2135|exostoses (multiple)-like 2
hg18_v1_chr22_+_36928972_36928972	0.0230423	SOX2.p2	NM_001161573|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)
hg18_v1_chr12_-_113326085_113326089	0.0230346	SOX2.p2	NM_080718|TBX5|6910|T-box 5	U80987|TBX5|6910|T-box 5	U89353|TBX5|6910|T-box 5	EU446658|TBX5|6910|T-box 5
hg18_v1_chr1_+_246703249_246703274	0.0230314	SOX2.p2	BC136915|OR2T3|343173|olfactory receptor, family 2, subfamily T, member 3	BC136916|OR2T3|343173|olfactory receptor, family 2, subfamily T, member 3	NM_001005495|OR2T3|343173|olfactory receptor, family 2, subfamily T, member 3
hg18_v1_chr1_-_146090802_146091049	0.0230034	SOX2.p2	AY894575|NBPF1|55672|neuroblastoma breakpoint family, member 1	BX648497|NBPF11|200030|neuroblastoma breakpoint family, member 11
hg18_v1_chr1_-_114156387_114156422	0.0229603	SOX2.p2	CR627402|RSBN1|54665|round spermatid basic protein 1
hg18_v1_chr1_+_10413016_10413144	0.0229355	SOX2.p2	AF516753|APITD1-CORT|100526739|APITD1-CORT readthrough	BC029430|APITD1|378708|apoptosis-inducing, TAF9-like domain 1
hg18_v1_chr10_-_105100684_105100832	0.0229314	SOX2.p2	CR625113|PCGF6|84108|polycomb group ring finger 6	EU446621|PCGF6|84108|polycomb group ring finger 6	EU447006|PCGF6|84108|polycomb group ring finger 6	BC007602|PCGF6|84108|polycomb group ring finger 6	AB047006|PCGF6|84108|polycomb group ring finger 6	AK027885|PCGF6|84108|polycomb group ring finger 6
hg18_v1_chr8_-_72918938_72919048	0.0228975	SOX2.p2	AF087036|MSC|9242|musculin	BT007169|MSC|9242|musculin
hg18_v1_chrX_-_114158388_114158472	0.0228968	SOX2.p2	X95302|IL13RA2|3598|interleukin 13 receptor, alpha 2	AK308523|IL13RA2|3598|interleukin 13 receptor, alpha 2	GQ494004|IL13RA2|3598|interleukin 13 receptor, alpha 2	U70981|IL13RA2|3598|interleukin 13 receptor, alpha 2	AK291957|IL13RA2|3598|interleukin 13 receptor, alpha 2	CR594473|IL13RA2|3598|interleukin 13 receptor, alpha 2	CR623092|IL13RA2|3598|interleukin 13 receptor, alpha 2	NM_000640|IL13RA2|3598|interleukin 13 receptor, alpha 2	Y08768|IL13RA2|3598|interleukin 13 receptor, alpha 2	AK309444|IL13RA2|3598|interleukin 13 receptor, alpha 2
hg18_v1_chr2_+_74913289_74913289	0.0228188	SOX2.p2	AF086198|HK2|3099|hexokinase 2	NM_000189|HK2|3099|hexokinase 2
hg18_v1_chr16_-_4263056_4263076	0.0227313	SOX2.p2	AK309301|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)
hg18_v1_chr8_+_17986647_17986656	0.0227052	SOX2.p2	
hg18_v1_chr11_+_16716751_16716970	0.0227038	SOX2.p2	BC103747|C11orf58|10944|chromosome 11 open reading frame 58	AK315382|C11orf58|10944|chromosome 11 open reading frame 58	BC007103|C11orf58|10944|chromosome 11 open reading frame 58	BC016352|C11orf58|10944|chromosome 11 open reading frame 58	BC020937|C11orf58|10944|chromosome 11 open reading frame 58	CR602799|C11orf58|10944|chromosome 11 open reading frame 58	CR592723|C11orf58|10944|chromosome 11 open reading frame 58	CR614521|C11orf58|10944|chromosome 11 open reading frame 58	CR606236|C11orf58|10944|chromosome 11 open reading frame 58	CR602558|C11orf58|10944|chromosome 11 open reading frame 58	CR623569|C11orf58|10944|chromosome 11 open reading frame 58	CR600300|C11orf58|10944|chromosome 11 open reading frame 58	CR616149|C11orf58|10944|chromosome 11 open reading frame 58	CR614900|C11orf58|10944|chromosome 11 open reading frame 58	U51678|C11orf58|10944|chromosome 11 open reading frame 58	CR456882|C11orf58|10944|chromosome 11 open reading frame 58
hg18_v1_chr6_+_79844267_79844292	0.0226975	SOX2.p2	BC036479|PHIP|55023|pleckstrin homology domain interacting protein
hg18_v1_chr4_-_57216816_57217013	0.0226908	SOX2.p2	AB019573|HOPX|84525|HOP homeobox	AM393649|HOPX|84525|HOP homeobox	DQ892193|HOPX|84525|HOP homeobox	EU176669|HOPX|84525|HOP homeobox	CR626269|HOPX|84525|HOP homeobox	CR600537|HOPX|84525|HOP homeobox
hg18_v1_chrX_-_154495686_154495815	0.0226668	SOX2.p2	AF373407|TMLHE|55217|trimethyllysine hydroxylase, epsilon	BC025269|TMLHE|55217|trimethyllysine hydroxylase, epsilon	BC009673|TMLHE|55217|trimethyllysine hydroxylase, epsilon	CR610079|TMLHE|55217|trimethyllysine hydroxylase, epsilon	CR610946|TMLHE|55217|trimethyllysine hydroxylase, epsilon	AK291694|TMLHE|55217|trimethyllysine hydroxylase, epsilon	CR595358|TMLHE|55217|trimethyllysine hydroxylase, epsilon	AK001589|TMLHE|55217|trimethyllysine hydroxylase, epsilon	NM_001184797|TMLHE|55217|trimethyllysine hydroxylase, epsilon	NM_018196|TMLHE|55217|trimethyllysine hydroxylase, epsilon
hg18_v1_chr6_-_31890765_31890813	0.0226238	SOX2.p2	D85730|HSPA1L|3305|heat shock 70kDa protein 1-like	AK302179|HSPA1L|3305|heat shock 70kDa protein 1-like	BC034483|HSPA1L|3305|heat shock 70kDa protein 1-like	NM_005527|HSPA1L|3305|heat shock 70kDa protein 1-like
hg18_v1_chr10_+_28862429_28862444	0.0225724	SOX2.p2	NM_016628|WAC|51322|WW domain containing adaptor with coiled-coil	NM_100486|WAC|51322|WW domain containing adaptor with coiled-coil	AK290174|WAC|51322|WW domain containing adaptor with coiled-coil	AK223600|WAC|51322|WW domain containing adaptor with coiled-coil	BC004258|WAC|51322|WW domain containing adaptor with coiled-coil
hg18_v1_chr17_+_22982344_22982367	0.0225722	SOX2.p2	AB005894|LGALS9|3965|lectin, galactoside-binding, soluble, 9	AK301624|LGALS9|3965|lectin, galactoside-binding, soluble, 9	BC110340|LGALS9|3965|lectin, galactoside-binding, soluble, 9	AK296031|LGALS9|3965|lectin, galactoside-binding, soluble, 9	CR602208|LGALS9|3965|lectin, galactoside-binding, soluble, 9
hg18_v1_chr1_-_201422490_201422532	0.0225694	SOX2.p2	BC008568|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	AK312911|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)
hg18_v1_chr11_-_47620590_47620788	0.0225179	SOX2.p2	DQ891810|MTCH2|23788|mitochondrial carrier homolog 2 (C. elegans)	DQ894993|MTCH2|23788|mitochondrial carrier homolog 2 (C. elegans)	AK223097|MTCH2|23788|mitochondrial carrier homolog 2 (C. elegans)	CR625977|MTCH2|23788|mitochondrial carrier homolog 2 (C. elegans)	BC000875|MTCH2|23788|mitochondrial carrier homolog 2 (C. elegans)	AY380792|MTCH2|23788|mitochondrial carrier homolog 2 (C. elegans)	AF085361|MTCH2|23788|mitochondrial carrier homolog 2 (C. elegans)	AF176008|MTCH2|23788|mitochondrial carrier homolog 2 (C. elegans)	AK295218|MTCH2|23788|mitochondrial carrier homolog 2 (C. elegans)	CR619866|MTCH2|23788|mitochondrial carrier homolog 2 (C. elegans)	CR606794|MTCH2|23788|mitochondrial carrier homolog 2 (C. elegans)	AK313032|MTCH2|23788|mitochondrial carrier homolog 2 (C. elegans)	CR618818|MTCH2|23788|mitochondrial carrier homolog 2 (C. elegans)	NM_014342|MTCH2|23788|mitochondrial carrier homolog 2 (C. elegans)
hg18_v1_chr11_-_85103438_85103438	0.0225037	SOX2.p2	NM_032379|SYTL2|54843|synaptotagmin-like 2
hg18_v1_chr11_-_10546654_10546940	0.0224825	SOX2.p2	DQ892040|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	DQ895232|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	AK300885|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	BC026231|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	CR598862|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	CR614245|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	AF118108|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	CR604450|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	CR612000|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	AF127670|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	AY358925|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	CR614790|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	CR599107|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	CR595979|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	CR597409|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	AK075443|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	CR605021|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	AK312462|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	NM_006691|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1
hg18_v1_chr21_-_31107431_31107440	0.0224083	SOX2.p2	BC130397|KRTAP8-1|337879|keratin associated protein 8-1	BC133033|KRTAP8-1|337879|keratin associated protein 8-1	AB096961|KRTAP8-1|337879|keratin associated protein 8-1	AJ457064|KRTAP8-1|337879|keratin associated protein 8-1	NM_175857|KRTAP8-1|337879|keratin associated protein 8-1
hg18_v1_chr7_+_107088315_107088315	0.0224066	SOX2.p2	AF030880|SLC26A4|5172|solute carrier family 26, member 4	NM_000441|SLC26A4|5172|solute carrier family 26, member 4
hg18_v1_chr3_-_196751293_196751512	0.0224031	SOX2.p2	BC007655|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2	BC066921|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2	NM_006241|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2
hg18_v1_chr6_+_33045070_33045089	0.0223731	SOX2.p2	
hg18_v1_chr13_+_47775901_47775944	0.022358	SOX2.p2	L41870|RB1|5925|retinoblastoma 1	M15400|RB1|5925|retinoblastoma 1	M19701|RB1|5925|retinoblastoma 1	M28419|RB1|5925|retinoblastoma 1
hg18_v1_chr11_-_118167036_118167057	0.0223081	SOX2.p2	D17532|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
hg18_v1_chr8_-_7718769_7718821	0.0222766	SOX2.p2	AB089180|DEFB105A|245908|defensin, beta 105A	AF540977|DEFB105A|245908|defensin, beta 105A	BC128437|DEFB105A|245908|defensin, beta 105A	BC128438|DEFB105A|245908|defensin, beta 105A	NM_001040703|DEFB105B|504180|defensin, beta 105B	NM_152250|DEFB105A|245908|defensin, beta 105A	BC140937|DEFB105A|245908|defensin, beta 105A
hg18_v1_chr6_-_28294642_28294869	0.022254	SOX2.p2	AK292767|LOC222699|222699|transducer of ERBB2, 2 pseudogene	BC050562|LOC222699|222699|transducer of ERBB2, 2 pseudogene	BC015543|LOC222699|222699|transducer of ERBB2, 2 pseudogene	BC039027|LOC222699|222699|transducer of ERBB2, 2 pseudogene
hg18_v1_chr14_-_59020878_59020883	0.0222435	SOX2.p2	
hg18_v1_chr15_-_53349775_53349876	0.0221969	SOX2.p2	AF125393|RAB27A|5873|RAB27A, member RAS oncogene family	NM_183234|RAB27A|5873|RAB27A, member RAS oncogene family	U57094|RAB27A|5873|RAB27A, member RAS oncogene family	NM_004580|RAB27A|5873|RAB27A, member RAS oncogene family	U38654|RAB27A|5873|RAB27A, member RAS oncogene family
hg18_v1_chr19_+_55985483_55985483	0.0221938	SOX2.p2	NM_033068|ACPT|93650|acid phosphatase, testicular
hg18_v1_chr2_+_188865634_188865755	0.0221681	SOX2.p2	NM_016315|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1
hg18_v1_chr11_-_55492514_55492565	0.0221556	SOX2.p2	NM_001005491|OR10AG1|282770|olfactory receptor, family 10, subfamily AG, member 1	BC136890|OR10AG1|282770|olfactory receptor, family 10, subfamily AG, member 1	BC136891|OR10AG1|282770|olfactory receptor, family 10, subfamily AG, member 1
hg18_v1_chr12_-_21702021_21702034	0.0221359	SOX2.p2	BC002362|LDHB|3945|lactate dehydrogenase B	CR591075|LDHB|3945|lactate dehydrogenase B	CR592578|LDHB|3945|lactate dehydrogenase B	CR624424|LDHB|3945|lactate dehydrogenase B	CR603165|LDHB|3945|lactate dehydrogenase B	CR609530|LDHB|3945|lactate dehydrogenase B	CR624226|LDHB|3945|lactate dehydrogenase B	AY189689|LDHB|3945|lactate dehydrogenase B	CR601136|LDHB|3945|lactate dehydrogenase B	CR604960|LDHB|3945|lactate dehydrogenase B	CR596890|LDHB|3945|lactate dehydrogenase B	CR600793|LDHB|3945|lactate dehydrogenase B
hg18_v1_chr11_-_118167065_118167065	0.0221324	SOX2.p2	BC039826|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
hg18_v1_chr1_-_203985701_203985724	0.0221324	SOX2.p2	CR457339|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1	DQ891218|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1	DQ894401|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1
hg18_v1_chr7_+_26404711_26404863	0.0221016	SOX2.p2	AK056484|LOC441204|441204|hypothetical locus LOC441204
hg18_v1_chr22_-_34566276_34566297	0.0220979	SOX2.p2	CR456559|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2
hg18_v1_chr14_+_51397059_51397088	0.0220835	SOX2.p2	AK307171|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2
hg18_v1_chr6_+_10663934_10663934	0.0220428	SOX2.p2	NM_001491|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)
hg18_v1_chr9_+_5500544_5500783	0.022037	SOX2.p2	AF344424|PDCD1LG2|80380|programmed cell death 1 ligand 2	NM_025239|PDCD1LG2|80380|programmed cell death 1 ligand 2	AF329193|PDCD1LG2|80380|programmed cell death 1 ligand 2	EF444806|PDCD1LG2|80380|programmed cell death 1 ligand 2	BC113678|PDCD1LG2|80380|programmed cell death 1 ligand 2	BC113680|PDCD1LG2|80380|programmed cell death 1 ligand 2	BC143920|PDCD1LG2|80380|programmed cell death 1 ligand 2	BC143921|PDCD1LG2|80380|programmed cell death 1 ligand 2	BC074766|PDCD1LG2|80380|programmed cell death 1 ligand 2
hg18_v1_chr19_-_61876057_61876057	0.0220348	SOX2.p2	NM_001005850|ZNF835|90485|zinc finger protein 835
hg18_v1_chr3_+_48388712_48388768	0.0220344	SOX2.p2	AY247969|FBXW12|285231|F-box and WD repeat domain containing 12	NM_001159927|FBXW12|285231|F-box and WD repeat domain containing 12	NM_001159929|FBXW12|285231|F-box and WD repeat domain containing 12	NM_207102|FBXW12|285231|F-box and WD repeat domain containing 12	BC101303|FBXW12|285231|F-box and WD repeat domain containing 12	BC101304|FBXW12|285231|F-box and WD repeat domain containing 12	BC101305|FBXW12|285231|F-box and WD repeat domain containing 12	BC101306|FBXW12|285231|F-box and WD repeat domain containing 12
hg18_v1_chrX_+_77052834_77052864	0.0219666	SOX2.p2	NM_000052|ATP7A|538|ATPase, Cu++ transporting, alpha polypeptide	L06133|ATP7A|538|ATPase, Cu++ transporting, alpha polypeptide
hg18_v1_chr1_-_199742589_199742589	0.0219354	SOX2.p2	AK290133|CSRP1|1465|cysteine and glycine-rich protein 1	NM_001193571|CSRP1|1465|cysteine and glycine-rich protein 1
hg18_v1_chr14_-_105279740_105279770	0.021916	SOX2.p2	
hg18_v1_chr14_+_61653827_61653949	0.0217312	SOX2.p2	CR626003|FLJ43390|646113|hypothetical LOC646113	BX248751|FLJ43390|646113|hypothetical LOC646113
hg18_v1_chr5_+_61637993_61638061	0.0217075	SOX2.p2	AK297347|KIF2A|3796|kinesin heavy chain member 2A	AK307880|KIF2A|3796|kinesin heavy chain member 2A	EF560716|KIF2A|3796|kinesin heavy chain member 2A	EF560728|KIF2A|3796|kinesin heavy chain member 2A	EU832810|KIF2A|3796|kinesin heavy chain member 2A	GQ129246|KIF2A|3796|kinesin heavy chain member 2A	AK315866|KIF2A|3796|kinesin heavy chain member 2A
hg18_v1_chr6_-_30763057_30763079	0.0217025	SOX2.p2	AB075829|KIAA1949|170954|KIAA1949	NM_001134870|KIAA1949|170954|KIAA1949	AK125639|KIAA1949|170954|KIAA1949
hg18_v1_chr13_-_20533629_20533702	0.0216496	SOX2.p2	BC127671|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)	AF207547|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)	AB209897|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)	BC071572|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)
hg18_v1_chr3_-_52287603_52287694	0.021645	SOX2.p2	CR612750|WDR82|80335|WD repeat domain 82	CR616060|WDR82|80335|WD repeat domain 82
hg18_v1_chr3_-_121117647_121117670	0.0216285	SOX2.p2	CR615239|GSK3B|2932|glycogen synthase kinase 3 beta
hg18_v1_chr11_-_107234733_107234863	0.0216088	SOX2.p2	AK300582|SLC35F2|54733|solute carrier family 35, member F2	BC039195|SLC35F2|54733|solute carrier family 35, member F2
hg18_v1_chr19_+_43089720_43089785	0.0215915	SOX2.p2	BC150620|SIPA1L3|23094|signal-induced proliferation-associated 1 like 3	BC036863|SIPA1L3|23094|signal-induced proliferation-associated 1 like 3
hg18_v1_chr2_+_24660849_24660913	0.0214966	SOX2.p2	NM_003743|NCOA1|8648|nuclear receptor coactivator 1	NM_147223|NCOA1|8648|nuclear receptor coactivator 1	NM_147233|NCOA1|8648|nuclear receptor coactivator 1	AJ000881|NCOA1|8648|nuclear receptor coactivator 1	AJ000882|NCOA1|8648|nuclear receptor coactivator 1	U59302|NCOA1|8648|nuclear receptor coactivator 1
hg18_v1_chr17_+_27701251_27701288	0.0214736	SOX2.p2	CR617452|ZNF207|7756|zinc finger protein 207	BC002372|ZNF207|7756|zinc finger protein 207	NM_001032293|ZNF207|7756|zinc finger protein 207	NM_001098507|ZNF207|7756|zinc finger protein 207	NM_003457|ZNF207|7756|zinc finger protein 207
hg18_v1_chr6_+_64403668_64403683	0.0214269	SOX2.p2	AK307869|PHF3|23469|PHD finger protein 3
hg18_v1_chr12_-_108399510_108399541	0.0213914	SOX2.p2	AK092170|KCTD10|83892|potassium channel tetramerisation domain containing 10	AK027543|KCTD10|83892|potassium channel tetramerisation domain containing 10	AY205299|KCTD10|83892|potassium channel tetramerisation domain containing 10	NM_031954|KCTD10|83892|potassium channel tetramerisation domain containing 10
hg18_v1_chr22_-_18484695_18484730	0.0213897	SOX2.p2	BC017184|TRMT2A|27037|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	CR617494|TRMT2A|27037|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)
hg18_v1_chr2_+_1396239_1396285	0.0213718	SOX2.p2	BC063107|TPO|7173|thyroid peroxidase	NM_000547|TPO|7173|thyroid peroxidase	NM_175719|TPO|7173|thyroid peroxidase	BC095448|TPO|7173|thyroid peroxidase	M17755|TPO|7173|thyroid peroxidase	J02969|TPO|7173|thyroid peroxidase	J02970|TPO|7173|thyroid peroxidase	X17358|TPO|7173|thyroid peroxidase	Y00406|TPO|7173|thyroid peroxidase
hg18_v1_chr7_+_91408086_91408348	0.0213547	SOX2.p2	NM_005751|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9	NM_147185|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9	AJ131693|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9	AF026245|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9	BC015533|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9	AB019691|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9
hg18_v1_chr6_-_31960735_31960765	0.0213284	SOX2.p2	CR624754|EHMT2|10919|euchromatic histone-lysine N-methyltransferase 2
hg18_v1_chr5_+_92944680_92944798	0.0213191	SOX2.p2	BC017493|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1	NM_005654|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1
hg18_v1_chr12_-_54995923_54996039	0.0212801	SOX2.p2	AF186113|CNPY2|10330|canopy 2 homolog (zebrafish)	AB015631|CNPY2|10330|canopy 2 homolog (zebrafish)	BC065015|CNPY2|10330|canopy 2 homolog (zebrafish)
hg18_v1_chr4_+_88562726_88563080	0.0212739	SOX2.p2	NM_024047|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	NM_198038|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AK027295|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AK074845|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AF265341|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AF273028|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	CR619203|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	CR626425|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	CR597296|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AK075408|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	CR620878|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	CR604538|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AK308028|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	BC000542|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AY359123|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9
hg18_v1_chr17_-_5312959_5313103	0.021248	SOX2.p2	BC050409|DHX33|56919|DEAH (Asp-Glu-Ala-His) box polypeptide 33	AK314580|DHX33|56919|DEAH (Asp-Glu-Ala-His) box polypeptide 33	AK295760|DHX33|56919|DEAH (Asp-Glu-Ala-His) box polypeptide 33
hg18_v1_chr15_+_97010219_97010339	0.0211927	SOX2.p2	NM_000875|IGF1R|3480|insulin-like growth factor 1 receptor	X04434|IGF1R|3480|insulin-like growth factor 1 receptor	BC113610|IGF1R|3480|insulin-like growth factor 1 receptor	BC113612|IGF1R|3480|insulin-like growth factor 1 receptor	BC143721|IGF1R|3480|insulin-like growth factor 1 receptor	EU826611|IGF1R|3480|insulin-like growth factor 1 receptor	EU826612|IGF1R|3480|insulin-like growth factor 1 receptor
hg18_v1_chr5_+_72148173_72148320	0.0211566	SOX2.p2	NM_002270|TNPO1|3842|transportin 1	AK299671|TNPO1|3842|transportin 1	U70322|TNPO1|3842|transportin 1	AK301021|TNPO1|3842|transportin 1	AK308177|TNPO1|3842|transportin 1	BC040340|TNPO1|3842|transportin 1
hg18_v1_chr1_+_24944554_24944631	0.0211441	SOX2.p2	AF109196|CLIC4|25932|chloride intracellular channel 4	AM393644|CLIC4|25932|chloride intracellular channel 4	CR533501|CLIC4|25932|chloride intracellular channel 4
hg18_v1_chr22_-_30885200_30885308	0.0211429	SOX2.p2	BC139845|C22orf42|150297|chromosome 22 open reading frame 42	CR456485|C22orf42|150297|chromosome 22 open reading frame 42	NM_001010859|C22orf42|150297|chromosome 22 open reading frame 42	BC040263|C22orf42|150297|chromosome 22 open reading frame 42
hg18_v1_chr5_+_60969392_60969392	0.0211378	SOX2.p2	AK094862|FLJ37543|285668|hypothetical protein FLJ37543	NM_173667|FLJ37543|285668|hypothetical protein FLJ37543
hg18_v1_chr19_+_10515591_10515765	0.0211287	SOX2.p2	AK056210|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)	AK314712|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)	AK316454|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)	BC068992|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)	AK223383|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)	BC007639|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)	NM_032885|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)	AJ312332|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)
hg18_v1_chr19_+_10515570_10515590	0.0211182	SOX2.p2	AK294676|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)
hg18_v1_chr1_+_183392814_183392973	0.0210694	SOX2.p2	NM_001105518|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)	AK127980|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)	BC030781|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)	NM_017673|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)	AK315802|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)
hg18_v1_chr2_+_170298487_170298676	0.0210566	SOX2.p2	
hg18_v1_chr2_-_55131096_55131118	0.0210467	SOX2.p2	AK129806|RTN4|57142|reticulon 4	AF132047|RTN4|57142|reticulon 4
hg18_v1_chrX_-_13744933_13745092	0.0210156	SOX2.p2	AM392527|GPM6B|2824|glycoprotein M6B	AM392754|GPM6B|2824|glycoprotein M6B	AM392867|GPM6B|2824|glycoprotein M6B	AM392943|GPM6B|2824|glycoprotein M6B	AM392957|GPM6B|2824|glycoprotein M6B	AM392968|GPM6B|2824|glycoprotein M6B	AM392974|GPM6B|2824|glycoprotein M6B	AM393048|GPM6B|2824|glycoprotein M6B	AM393215|GPM6B|2824|glycoprotein M6B	AM393570|GPM6B|2824|glycoprotein M6B	AM393576|GPM6B|2824|glycoprotein M6B	AM393741|GPM6B|2824|glycoprotein M6B	AM393770|GPM6B|2824|glycoprotein M6B	AM393783|GPM6B|2824|glycoprotein M6B	AM393822|GPM6B|2824|glycoprotein M6B	DQ891541|GPM6B|2824|glycoprotein M6B	DQ894729|GPM6B|2824|glycoprotein M6B	EU832134|GPM6B|2824|glycoprotein M6B	EU832227|GPM6B|2824|glycoprotein M6B	BC008151|GPM6B|2824|glycoprotein M6B
hg18_v1_chr19_-_6230797_6230809	0.020954	SOX2.p2	
hg18_v1_chr3_-_171013145_171013413	0.0209537	SOX2.p2	AK293661|LRRC34|151827|leucine rich repeat containing 34	AK095125|LRRC34|151827|leucine rich repeat containing 34	NM_001172779|LRRC34|151827|leucine rich repeat containing 34	NM_001172780|LRRC34|151827|leucine rich repeat containing 34	NM_153353|LRRC34|151827|leucine rich repeat containing 34	CR606238|LRRC34|151827|leucine rich repeat containing 34
hg18_v1_chr8_-_86441115_86441194	0.0209016	SOX2.p2	DQ890930|CA1|759|carbonic anhydrase I	DQ894091|CA1|759|carbonic anhydrase I	X05014|CA1|759|carbonic anhydrase I	NM_001164830|CA1|759|carbonic anhydrase I
hg18_v1_chr19_-_2901583_2901642	0.0209008	SOX2.p2	
hg18_v1_chr12_-_119391794_119391880	0.02089	SOX2.p2	U30825|SRSF9|8683|serine/arginine-rich splicing factor 9	CR607246|SRSF9|8683|serine/arginine-rich splicing factor 9	BC093971|SRSF9|8683|serine/arginine-rich splicing factor 9	BC093973|SRSF9|8683|serine/arginine-rich splicing factor 9	CR615364|SRSF9|8683|serine/arginine-rich splicing factor 9	CR617389|SRSF9|8683|serine/arginine-rich splicing factor 9	CR593564|SRSF9|8683|serine/arginine-rich splicing factor 9	AK290644|SRSF9|8683|serine/arginine-rich splicing factor 9	CR598070|SRSF9|8683|serine/arginine-rich splicing factor 9
hg18_v1_chr7_-_136678815_136678871	0.0208752	SOX2.p2	D90226|PTN|5764|pleiotrophin
hg18_v1_chr1_-_159369081_159369101	0.0208512	SOX2.p2	BC013910|DEDD|9191|death effector domain containing	NM_001039711|DEDD|9191|death effector domain containing	NM_032998|DEDD|9191|death effector domain containing
hg18_v1_chr4_-_185632610_185632740	0.0208182	SOX2.p2	X15949|IRF2|3660|interferon regulatory factor 2	AK312953|IRF2|3660|interferon regulatory factor 2	NM_002199|IRF2|3660|interferon regulatory factor 2
hg18_v1_chr11_+_118394637_118394692	0.0207876	SOX2.p2	AF161520|TRAPPC4|51399|trafficking protein particle complex 4	AK025623|TRAPPC4|51399|trafficking protein particle complex 4	AK290520|TRAPPC4|51399|trafficking protein particle complex 4	AK293914|TRAPPC4|51399|trafficking protein particle complex 4	AK293977|TRAPPC4|51399|trafficking protein particle complex 4	AK297422|TRAPPC4|51399|trafficking protein particle complex 4	BC010866|TRAPPC4|51399|trafficking protein particle complex 4
hg18_v1_chr16_-_56886380_56886451	0.0207545	SOX2.p2	AK302175|PRSS54|221191|protease, serine, 54	AK058068|PRSS54|221191|protease, serine, 54	BC057843|PRSS54|221191|protease, serine, 54	NM_001080492|PRSS54|221191|protease, serine, 54
hg18_v1_chr17_+_22982278_22982312	0.0207288	SOX2.p2	CR614567|LGALS9|3965|lectin, galactoside-binding, soluble, 9	NM_002308|LGALS9|3965|lectin, galactoside-binding, soluble, 9	NM_009587|LGALS9|3965|lectin, galactoside-binding, soluble, 9
hg18_v1_chr10_-_13430024_13430067	0.0207266	SOX2.p2	AK301568|SEPHS1|22929|selenophosphate synthetase 1	AK309829|SEPHS1|22929|selenophosphate synthetase 1
hg18_v1_chr19_-_17432724_17432762	0.0206789	SOX2.p2	BC014127|NXNL1|115861|nucleoredoxin-like 1	NM_138454|NXNL1|115861|nucleoredoxin-like 1	DQ426894|NXNL1|115861|nucleoredoxin-like 1
hg18_v1_chr11_-_113776262_113776507	0.0206543	SOX2.p2	CR457222|C11orf71|54494|chromosome 11 open reading frame 71	BC071695|C11orf71|54494|chromosome 11 open reading frame 71	NM_019021|C11orf71|54494|chromosome 11 open reading frame 71	BC009041|C11orf71|54494|chromosome 11 open reading frame 71	AK000017|C11orf71|54494|chromosome 11 open reading frame 71	CR597454|C11orf71|54494|chromosome 11 open reading frame 71
hg18_v1_chr19_-_4133495_4133595	0.0206399	SOX2.p2	CR618222|SIRT6|51548|sirtuin 6	DQ896358|SIRT6|51548|sirtuin 6	EU176413|SIRT6|51548|sirtuin 6	CR457200|SIRT6|51548|sirtuin 6	BC005026|SIRT6|51548|sirtuin 6	CR600586|SIRT6|51548|sirtuin 6	BC004218|SIRT6|51548|sirtuin 6	CR590451|SIRT6|51548|sirtuin 6	CR601886|SIRT6|51548|sirtuin 6	CR611152|SIRT6|51548|sirtuin 6	AK299420|SIRT6|51548|sirtuin 6	BC028220|SIRT6|51548|sirtuin 6	CR619282|SIRT6|51548|sirtuin 6	CR615004|SIRT6|51548|sirtuin 6	AK293348|SIRT6|51548|sirtuin 6	AK315048|SIRT6|51548|sirtuin 6	AK301247|SIRT6|51548|sirtuin 6	AK074810|SIRT6|51548|sirtuin 6	AK225567|SIRT6|51548|sirtuin 6	AF233396|SIRT6|51548|sirtuin 6	NM_001193285|SIRT6|51548|sirtuin 6	NM_016539|SIRT6|51548|sirtuin 6
hg18_v1_chr3_-_187744808_187744860	0.020605	SOX2.p2	AF161703|CRYGS|1427|crystallin, gamma S	BC069478|CRYGS|1427|crystallin, gamma S	AK314172|CRYGS|1427|crystallin, gamma S	NM_017541|CRYGS|1427|crystallin, gamma S
hg18_v1_chr8_+_77756077_77756089	0.0206029	SOX2.p2	AB083343|ZFHX4|79776|zinc finger homeobox 4
hg18_v1_chr22_-_30071761_30071970	0.0206026	SOX2.p2	AK291803|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	BC021091|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1
hg18_v1_chr20_-_33793286_33793437	0.0205864	SOX2.p2	L10911|RBM39|9584|RNA binding motif protein 39	BC107886|RBM39|9584|RNA binding motif protein 39	L10910|RBM39|9584|RNA binding motif protein 39	BC131543|RBM39|9584|RNA binding motif protein 39
hg18_v1_chr12_-_49763405_49763501	0.0205684	SOX2.p2	BC017221|CSRNP2|81566|cysteine-serine-rich nuclear protein 2	AK313080|CSRNP2|81566|cysteine-serine-rich nuclear protein 2
hg18_v1_chr5_-_111120764_111120807	0.0205636	SOX2.p2	CR605504|C5orf13|9315|chromosome 5 open reading frame 13	CR606026|C5orf13|9315|chromosome 5 open reading frame 13	CR608957|C5orf13|9315|chromosome 5 open reading frame 13	CR610267|C5orf13|9315|chromosome 5 open reading frame 13	CR611162|C5orf13|9315|chromosome 5 open reading frame 13	CR622215|C5orf13|9315|chromosome 5 open reading frame 13	CR594948|C5orf13|9315|chromosome 5 open reading frame 13	CR602516|C5orf13|9315|chromosome 5 open reading frame 13	CR612701|C5orf13|9315|chromosome 5 open reading frame 13	CR625954|C5orf13|9315|chromosome 5 open reading frame 13	CR602437|C5orf13|9315|chromosome 5 open reading frame 13	CR590608|C5orf13|9315|chromosome 5 open reading frame 13	BC019068|C5orf13|9315|chromosome 5 open reading frame 13	BX649051|C5orf13|9315|chromosome 5 open reading frame 13	BC072013|C5orf13|9315|chromosome 5 open reading frame 13	BC072443|C5orf13|9315|chromosome 5 open reading frame 13
hg18_v1_chr8_-_27524744_27524854	0.0205481	SOX2.p2	M25915|CLU|1191|clusterin	BX648414|CLU|1191|clusterin	NM_203339|CLU|1191|clusterin
hg18_v1_chr3_-_14964403_14964530	0.0205401	SOX2.p2	
hg18_v1_chr13_+_36146048_36146156	0.0205277	SOX2.p2	BC036540|C13orf36|400120|chromosome 13 open reading frame 36	NM_203451|C13orf36|400120|chromosome 13 open reading frame 36	AK294236|C13orf36|400120|chromosome 13 open reading frame 36
hg18_v1_chr4_-_9727598_9727670	0.0204759	SOX2.p2	NM_005112|WDR1|9948|WD repeat domain 1	NM_017491|WDR1|9948|WD repeat domain 1
hg18_v1_chr19_-_63722732_63722798	0.0204431	SOX2.p2	BC024738|ZBTB45|84878|zinc finger and BTB domain containing 45	NM_032792|ZBTB45|84878|zinc finger and BTB domain containing 45
hg18_v1_chr19_+_3831660_3831671	0.0204371	SOX2.p2	AB058775|ATCAY|85300|ataxia, cerebellar, Cayman type
hg18_v1_chr4_+_88939725_88939765	0.0204357	SOX2.p2	NM_004967|IBSP|3381|integrin-binding sialoprotein	J05213|IBSP|3381|integrin-binding sialoprotein
hg18_v1_chr15_+_67094087_67094124	0.0204346	SOX2.p2	NM_001184779|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5	NM_024505|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5	AF353088|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5	AF353089|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5	AK314689|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5	AK074071|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5
hg18_v1_chr9_+_131637549_131637623	0.020401	SOX2.p2	BC039593|USP20|10868|ubiquitin specific peptidase 20	AY074877|USP20|10868|ubiquitin specific peptidase 20	NM_001008563|USP20|10868|ubiquitin specific peptidase 20
hg18_v1_chr1_+_100089118_100089186	0.0203935	SOX2.p2	NM_000646|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	U84011|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	AB208867|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase
hg18_v1_chr22_+_25155220_25155428	0.0203689	SOX2.p2	CR603469|ASPHD2|57168|aspartate beta-hydroxylase domain containing 2	NM_020437|ASPHD2|57168|aspartate beta-hydroxylase domain containing 2	BC036753|ASPHD2|57168|aspartate beta-hydroxylase domain containing 2	AK315112|ASPHD2|57168|aspartate beta-hydroxylase domain containing 2
hg18_v1_chr12_-_44644216_44644239	0.0203024	SOX2.p2	
hg18_v1_chr19_+_9334695_9334695	0.0202934	SOX2.p2	NM_003451|ZNF177|7730|zinc finger protein 177	U37263|ZNF177|7730|zinc finger protein 177
hg18_v1_chr2_-_233349469_233349518	0.0202868	SOX2.p2	AF061118|KCNJ13|3769|potassium inwardly-rectifying channel, subfamily J, member 13	AJ007557|KCNJ13|3769|potassium inwardly-rectifying channel, subfamily J, member 13	AK314019|KCNJ13|3769|potassium inwardly-rectifying channel, subfamily J, member 13	BC037290|KCNJ13|3769|potassium inwardly-rectifying channel, subfamily J, member 13	NM_001172416|KCNJ13|3769|potassium inwardly-rectifying channel, subfamily J, member 13	NM_001172417|KCNJ13|3769|potassium inwardly-rectifying channel, subfamily J, member 13	NM_002242|KCNJ13|3769|potassium inwardly-rectifying channel, subfamily J, member 13
hg18_v1_chr8_+_145136155_145136217	0.0202854	SOX2.p2	NM_000837|GRINA|2907|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)	NM_001009184|GRINA|2907|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)
hg18_v1_chr10_+_70152216_70152322	0.0202572	SOX2.p2	BC026036|CCAR1|55749|cell division cycle and apoptosis regulator 1	BC089420|CCAR1|55749|cell division cycle and apoptosis regulator 1
hg18_v1_chr1_-_203985780_203985850	0.020257	SOX2.p2	AK025133|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1	AK225228|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1	AJ012584|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1
hg18_v1_chr2_-_234441766_234441786	0.0202517	SOX2.p2	AK301707|MSL3L2|151507|male-specific lethal 3-like 2 (Drosophila)
hg18_v1_chr16_+_3473476_3473618	0.0202	SOX2.p2	AK095819|NAT15|79903|N-acetyltransferase 15 (GCN5-related, putative)
hg18_v1_chr5_+_138117017_138117044	0.0201682	SOX2.p2	AK094151|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	D13866|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	BC000385|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	AK304267|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa
hg18_v1_chr6_-_10939095_10939097	0.0201672	SOX2.p2	AF505623|MAK|4117|male germ cell-associated kinase	NM_005906|MAK|4117|male germ cell-associated kinase	BC039825|MAK|4117|male germ cell-associated kinase
hg18_v1_chrX_+_70232362_70233103	0.0201051	SOX2.p2	CR596165|FOXO4|4303|forkhead box O4	NM_001170931|FOXO4|4303|forkhead box O4	NM_005938|FOXO4|4303|forkhead box O4	X93996|FOXO4|4303|forkhead box O4	BC106761|FOXO4|4303|forkhead box O4	AF384029|FOXO4|4303|forkhead box O4
hg18_v1_chr15_+_64372876_64373031	0.0200912	SOX2.p2	NM_001143688|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like	AK095407|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like
hg18_v1_chr11_+_111666133_111666228	0.0200692	SOX2.p2	
hg18_v1_chr9_+_122877056_122877110	0.0200463	SOX2.p2	AK307387|CEP110|11064|centrosomal protein 110kDa	BC089415|CEP110|11064|centrosomal protein 110kDa
hg18_v1_chr1_-_242681860_242682062	0.0199059	SOX2.p2	AK308749|ADSS|159|adenylosuccinate synthase	NM_001126|ADSS|159|adenylosuccinate synthase
hg18_v1_chr9_-_40782062_40782111	0.0198791	SOX2.p2	AK057375|ZNF658|26149|zinc finger protein 658	AK292150|ZNF658|26149|zinc finger protein 658	NM_033160|ZNF658|26149|zinc finger protein 658
hg18_v1_chr9_-_125070613_125070669	0.0198683	SOX2.p2	AL833947|STRBP|55342|spermatid perinuclear RNA binding protein	AL834150|STRBP|55342|spermatid perinuclear RNA binding protein	BC017732|STRBP|55342|spermatid perinuclear RNA binding protein	NM_018387|STRBP|55342|spermatid perinuclear RNA binding protein
hg18_v1_chr9_-_131637360_131637360	0.0198557	SOX2.p2	CR604621|C9orf78|51759|chromosome 9 open reading frame 78
hg18_v1_chr7_+_73709974_73709987	0.0198287	SOX2.p2	BC070484|GTF2I|2969|general transcription factor IIi
hg18_v1_chr14_+_64040979_64041044	0.0198243	SOX2.p2	BX248777|ZBTB1|22890|zinc finger and BTB domain containing 1	NM_001123329|ZBTB1|22890|zinc finger and BTB domain containing 1	NM_014950|ZBTB1|22890|zinc finger and BTB domain containing 1
hg18_v1_chr11_+_128069340_128069364	0.0197954	SOX2.p2	AY029368|FLI1|2313|Friend leukemia virus integration 1	DQ892582|FLI1|2313|Friend leukemia virus integration 1	DQ896858|FLI1|2313|Friend leukemia virus integration 1
hg18_v1_chr5_-_147191334_147191392	0.0197845	SOX2.p2	DQ893613|SPINK1|6690|serine peptidase inhibitor, Kazal type 1	DQ896842|SPINK1|6690|serine peptidase inhibitor, Kazal type 1	BC025790|SPINK1|6690|serine peptidase inhibitor, Kazal type 1	Y00705|SPINK1|6690|serine peptidase inhibitor, Kazal type 1
hg18_v1_chr6_+_74228331_74228424	0.0197752	SOX2.p2	AL833823|MTO1|25821|mitochondrial translation optimization 1 homolog (S. cerevisiae)
hg18_v1_chr16_+_87164319_87164340	0.0197565	SOX2.p2	AK225807|ZC3H18|124245|zinc finger CCCH-type containing 18
hg18_v1_chr5_-_78318112_78318112	0.0197261	SOX2.p2	NM_000046|ARSB|411|arylsulfatase B
hg18_v1_chr7_-_99536852_99536928	0.019725	SOX2.p2	DQ895947|MCM7|4176|minichromosome maintenance complex component 7	EU176445|MCM7|4176|minichromosome maintenance complex component 7	BC009398|MCM7|4176|minichromosome maintenance complex component 7	AK293172|MCM7|4176|minichromosome maintenance complex component 7	AK226175|MCM7|4176|minichromosome maintenance complex component 7
hg18_v1_chr9_-_106338914_106338957	0.0197004	SOX2.p2	NM_001001961|OR13C3|138803|olfactory receptor, family 13, subfamily C, member 3	BC136949|OR13C3|138803|olfactory receptor, family 13, subfamily C, member 3	BC136952|OR13C3|138803|olfactory receptor, family 13, subfamily C, member 3
hg18_v1_chr10_-_69661860_69661860	0.0196831	SOX2.p2	BC032621|ATOH7|220202|atonal homolog 7 (Drosophila)	NM_145178|ATOH7|220202|atonal homolog 7 (Drosophila)
hg18_v1_chr1_-_152162074_152162076	0.0196814	SOX2.p2	AK094665|GATAD2B|57459|GATA zinc finger domain containing 2B	NM_020699|GATAD2B|57459|GATA zinc finger domain containing 2B
hg18_v1_chr11_+_59001421_59001478	0.0196422	SOX2.p2	BC136893|OR4D10|390197|olfactory receptor, family 4, subfamily D, member 10	BC136894|OR4D10|390197|olfactory receptor, family 4, subfamily D, member 10	NM_001004705|OR4D10|390197|olfactory receptor, family 4, subfamily D, member 10
hg18_v1_chr11_+_4976788_4976788	0.0195583	SOX2.p2	NM_001004755|OR51L1|119682|olfactory receptor, family 51, subfamily L, member 1
hg18_v1_chr14_-_72994967_72995004	0.019549	SOX2.p2	BX248775|NUMB|8650|numb homolog (Drosophila)	BX647137|NUMB|8650|numb homolog (Drosophila)	AF171938|NUMB|8650|numb homolog (Drosophila)	AF171939|NUMB|8650|numb homolog (Drosophila)	AF171940|NUMB|8650|numb homolog (Drosophila)	AF171941|NUMB|8650|numb homolog (Drosophila)	BX248073|NUMB|8650|numb homolog (Drosophila)	AF015040|NUMB|8650|numb homolog (Drosophila)	AK315130|NUMB|8650|numb homolog (Drosophila)	BC020788|NUMB|8650|numb homolog (Drosophila)
hg18_v1_chr3_-_55496370_55496374	0.019529	SOX2.p2	BC064694|WNT5A|7474|wingless-type MMTV integration site family, member 5A	NM_003392|WNT5A|7474|wingless-type MMTV integration site family, member 5A	AK290375|WNT5A|7474|wingless-type MMTV integration site family, member 5A
hg18_v1_chr3_+_57969127_57969247	0.0195228	SOX2.p2	AF043045|FLNB|2317|filamin B, beta	NM_001164317|FLNB|2317|filamin B, beta	NM_001164318|FLNB|2317|filamin B, beta	NM_001164319|FLNB|2317|filamin B, beta	NM_001457|FLNB|2317|filamin B, beta	AB371580|FLNB|2317|filamin B, beta	AB191258|FLNB|2317|filamin B, beta	AB371581|FLNB|2317|filamin B, beta	AB371582|FLNB|2317|filamin B, beta	AF042166|FLNB|2317|filamin B, beta
hg18_v1_chrX_+_22200950_22201008	0.0195142	SOX2.p2	GQ355336|ZNF645|158506|zinc finger protein 645	AK098601|ZNF645|158506|zinc finger protein 645	NM_152577|ZNF645|158506|zinc finger protein 645	BC074910|ZNF645|158506|zinc finger protein 645	BC126190|ZNF645|158506|zinc finger protein 645	BC126192|ZNF645|158506|zinc finger protein 645
hg18_v1_chr7_+_116289827_116289828	0.0194961	SOX2.p2	AK314808|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2
hg18_v1_chr8_-_72919161_72919204	0.0194943	SOX2.p2	AF060154|MSC|9242|musculin
hg18_v1_chr1_+_23990228_23990297	0.0194466	SOX2.p2	CR597442|LYPLA2|11313|lysophospholipase II	CR607318|LYPLA2|11313|lysophospholipase II	CR614223|LYPLA2|11313|lysophospholipase II	AF098668|LYPLA2|11313|lysophospholipase II	NM_007260|LYPLA2|11313|lysophospholipase II	CR590473|LYPLA2|11313|lysophospholipase II	CR595388|LYPLA2|11313|lysophospholipase II	CR621740|LYPLA2|11313|lysophospholipase II	CR606705|LYPLA2|11313|lysophospholipase II	CR601116|LYPLA2|11313|lysophospholipase II	CR593399|LYPLA2|11313|lysophospholipase II	CR605682|LYPLA2|11313|lysophospholipase II	CR609115|LYPLA2|11313|lysophospholipase II	BC017034|LYPLA2|11313|lysophospholipase II	CR614434|LYPLA2|11313|lysophospholipase II	CR624649|LYPLA2|11313|lysophospholipase II	BC017193|LYPLA2|11313|lysophospholipase II	CR623546|LYPLA2|11313|lysophospholipase II
hg18_v1_chr2_+_11213053_11213175	0.0194432	SOX2.p2	AK301439|PQLC3|130814|PQ loop repeat containing 3	AK313402|PQLC3|130814|PQ loop repeat containing 3	CR602070|PQLC3|130814|PQ loop repeat containing 3	CR624863|PQLC3|130814|PQ loop repeat containing 3
hg18_v1_chr11_+_82460766_82460767	0.0194141	SOX2.p2	BC031316|LOC100506233|100506233|hypothetical LOC100506233
hg18_v1_chr7_-_139825693_139825785	0.0194122	SOX2.p2	CR605455|MKRN1|23608|makorin ring finger protein 1	AF192784|MKRN1|23608|makorin ring finger protein 1	AL136812|MKRN1|23608|makorin ring finger protein 1	CR625460|MKRN1|23608|makorin ring finger protein 1	AF117233|MKRN1|23608|makorin ring finger protein 1	BC025955|MKRN1|23608|makorin ring finger protein 1
hg18_v1_chrX_+_145698993_145698993	0.0193758	SOX2.p2	NM_001144064|CXorf51|100129239|chromosome X open reading frame 51
hg18_v1_chr6_+_43845875_43845914	0.0193041	SOX2.p2	CR614384|VEGFA|7422|vascular endothelial growth factor A
hg18_v1_chr6_+_31891259_31891285	0.0192853	SOX2.p2	CR595673|HSPA1A|3303|heat shock 70kDa protein 1A	CR603812|HSPA1A|3303|heat shock 70kDa protein 1A	CR608110|HSPA1A|3303|heat shock 70kDa protein 1A	CR618761|HSPA1A|3303|heat shock 70kDa protein 1A	NM_005345|HSPA1A|3303|heat shock 70kDa protein 1A	CR598680|HSPA1A|3303|heat shock 70kDa protein 1A	CR599258|HSPA1A|3303|heat shock 70kDa protein 1A	CR605652|HSPA1A|3303|heat shock 70kDa protein 1A	CR606872|HSPA1A|3303|heat shock 70kDa protein 1A	CR621778|HSPA1A|3303|heat shock 70kDa protein 1A	CR624878|HSPA1A|3303|heat shock 70kDa protein 1A	CR626292|HSPA1A|3303|heat shock 70kDa protein 1A
hg18_v1_chr6_+_42639929_42640035	0.0192632	SOX2.p2	AY061884|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2
hg18_v1_chr4_-_1655515_1655785	0.0192604	SOX2.p2	BC070112|FAM53A|152877|family with sequence similarity 53, member A	NM_001013622|FAM53A|152877|family with sequence similarity 53, member A	BC042071|FAM53A|152877|family with sequence similarity 53, member A	AK125566|FAM53A|152877|family with sequence similarity 53, member A	NM_001174070|FAM53A|152877|family with sequence similarity 53, member A
hg18_v1_chr5_-_83052606_83052775	0.0192567	SOX2.p2	AK313713|HAPLN1|1404|hyaluronan and proteoglycan link protein 1	NM_001884|HAPLN1|1404|hyaluronan and proteoglycan link protein 1	X17405|HAPLN1|1404|hyaluronan and proteoglycan link protein 1	X78076|HAPLN1|1404|hyaluronan and proteoglycan link protein 1
hg18_v1_chr8_-_11966664_11966664	0.0192207	SOX2.p2	DQ012022|DEFB130|245940|defensin, beta 130	NM_001037804|DEFB130|245940|defensin, beta 130	NM_001195257|LOC100133267|100133267|defensin, beta 130-like
hg18_v1_chrX_-_10548458_10548673	0.0191417	SOX2.p2	AF230976|MID1|4281|midline 1 (Opitz/BBB syndrome)	AF230977|MID1|4281|midline 1 (Opitz/BBB syndrome)	Y13667|MID1|4281|midline 1 (Opitz/BBB syndrome)	AK226104|MID1|4281|midline 1 (Opitz/BBB syndrome)	AK315095|MID1|4281|midline 1 (Opitz/BBB syndrome)	BC053626|MID1|4281|midline 1 (Opitz/BBB syndrome)	AK291215|MID1|4281|midline 1 (Opitz/BBB syndrome)	AY112901|MID1|4281|midline 1 (Opitz/BBB syndrome)	AK297205|MID1|4281|midline 1 (Opitz/BBB syndrome)	NM_000381|MID1|4281|midline 1 (Opitz/BBB syndrome)	NM_033289|MID1|4281|midline 1 (Opitz/BBB syndrome)
hg18_v1_chr11_-_61340804_61340951	0.0191046	SOX2.p2	AF199596|FADS1|3992|fatty acid desaturase 1	AF226273|FADS1|3992|fatty acid desaturase 1	DQ890643|FADS1|3992|fatty acid desaturase 1	DQ893822|FADS1|3992|fatty acid desaturase 1	AK027427|FADS1|3992|fatty acid desaturase 1	BC007846|FADS1|3992|fatty acid desaturase 1	AK222906|FADS1|3992|fatty acid desaturase 1	CR611884|FADS1|3992|fatty acid desaturase 1	AF084558|FADS1|3992|fatty acid desaturase 1	AL512760|FADS1|3992|fatty acid desaturase 1	AK314199|FADS1|3992|fatty acid desaturase 1	CR597486|FADS1|3992|fatty acid desaturase 1	AK027522|FADS1|3992|fatty acid desaturase 1
hg18_v1_chr14_+_38720085_38720227	0.0191031	SOX2.p2	CR603037|PNN|5411|pinin, desmosome associated protein
hg18_v1_chr3_+_157874898_157874898	0.0190417	SOX2.p2	NM_015508|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase
hg18_v1_chr9_+_136912474_136912488	0.0190355	SOX2.p2	AK290843|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)	BC069572|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)	BC069825|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)	BC113935|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)	D49353|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)	NM_004108|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)	NM_015837|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)	AK308476|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)
hg18_v1_chr1_+_246578699_246578699	0.0189904	SOX2.p2	NM_001001918|OR14C36|127066|olfactory receptor, family 14, subfamily C, member 36
hg18_v1_chr14_-_105279582_105279607	0.0189757	SOX2.p2	
hg18_v1_chrX_+_107569671_107569809	0.0189705	SOX2.p2	BC151846|COL4A5|1287|collagen, type IV, alpha 5	M90464|COL4A5|1287|collagen, type IV, alpha 5	NM_000495|COL4A5|1287|collagen, type IV, alpha 5	NM_033380|COL4A5|1287|collagen, type IV, alpha 5
hg18_v1_chr7_+_148475373_148475551	0.0189615	SOX2.p2	AK026380|ZNF398|57541|zinc finger protein 398	NM_170686|ZNF398|57541|zinc finger protein 398	BC043295|ZNF398|57541|zinc finger protein 398	AK290499|ZNF398|57541|zinc finger protein 398
hg18_v1_chr1_+_22252385_22252400	0.0189486	SOX2.p2	AL121737|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)
hg18_v1_chr5_-_43638860_43639042	0.0189428	SOX2.p2	
hg18_v1_chr4_-_84150997_84151040	0.018919	SOX2.p2	AB111889|LIN54|132660|lin-54 homolog (C. elegans)	BX640657|LIN54|132660|lin-54 homolog (C. elegans)	BX640966|LIN54|132660|lin-54 homolog (C. elegans)	NM_001115008|LIN54|132660|lin-54 homolog (C. elegans)	NM_194282|LIN54|132660|lin-54 homolog (C. elegans)
hg18_v1_chr5_-_147142444_147142450	0.0189092	SOX2.p2	AF273057|JAKMIP2|9832|janus kinase and microtubule interacting protein 2	NM_014790|JAKMIP2|9832|janus kinase and microtubule interacting protein 2
hg18_v1_chr11_+_77209807_77209896	0.0187868	SOX2.p2	AF092136|C11orf67|28971|chromosome 11 open reading frame 67	AK024688|C11orf67|28971|chromosome 11 open reading frame 67	BC002752|C11orf67|28971|chromosome 11 open reading frame 67	NM_024684|C11orf67|28971|chromosome 11 open reading frame 67
hg18_v1_chr3_+_151747204_151747265	0.0187347	SOX2.p2	AF212241|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	AK298586|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	AK027356|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	AK293993|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	NM_032025|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa
hg18_v1_chr3_-_120347571_120347604	0.0186923	SOX2.p2	AK097667|IGSF11|152404|immunoglobulin superfamily, member 11	NM_152538|IGSF11|152404|immunoglobulin superfamily, member 11	AK292387|IGSF11|152404|immunoglobulin superfamily, member 11
hg18_v1_chr3_+_99671013_99671110	0.0186883	SOX2.p2	BC136918|OR5K1|26339|olfactory receptor, family 5, subfamily K, member 1	BC136919|OR5K1|26339|olfactory receptor, family 5, subfamily K, member 1	NM_001004736|OR5K1|26339|olfactory receptor, family 5, subfamily K, member 1
hg18_v1_chr1_-_156800017_156800017	0.0186308	SOX2.p2	NM_001160325|OR6P1|128366|olfactory receptor, family 6, subfamily P, member 1
hg18_v1_chr12_+_26096757_26096763	0.0186021	SOX2.p2	NM_001164746|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8	AK292333|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8
hg18_v1_chr9_-_97309301_97309301	0.0185928	SOX2.p2	AB189440|PTCH1|5727|patched 1	NM_001083607|PTCH1|5727|patched 1
hg18_v1_chr9_-_96442377_96442390	0.0185751	SOX2.p2	AK292199|FBP1|2203|fructose-1,6-bisphosphatase 1
hg18_v1_chr15_+_69220841_69220887	0.0185694	SOX2.p2	NM_024817|THSD4|79875|thrombospondin, type I, domain containing 4	BC140868|THSD4|79875|thrombospondin, type I, domain containing 4
hg18_v1_chr17_-_53920699_53920797	0.0185428	SOX2.p2	BC115385|HSF5|124535|heat shock transcription factor family member 5	BC115386|HSF5|124535|heat shock transcription factor family member 5	BC033017|HSF5|124535|heat shock transcription factor family member 5	BC033020|HSF5|124535|heat shock transcription factor family member 5	NM_001080439|HSF5|124535|heat shock transcription factor family member 5
hg18_v1_chr2_+_45022540_45022561	0.0185296	SOX2.p2	AJ012611|SIX3|6496|SIX homeobox 3	NM_005413|SIX3|6496|SIX homeobox 3	AL162671|SIX3|6496|SIX homeobox 3
hg18_v1_chr11_-_58368555_58368574	0.0184817	SOX2.p2	BC021682|GLYATL2|219970|glycine-N-acyltransferase-like 2	NM_145016|GLYATL2|219970|glycine-N-acyltransferase-like 2	BC016789|GLYATL2|219970|glycine-N-acyltransferase-like 2
hg18_v1_chr16_+_65701428_65701579	0.0184746	SOX2.p2	
hg18_v1_chr5_+_6767717_6767784	0.0184547	SOX2.p2	NM_001171805|PAPD7|11044|PAP associated domain containing 7	NM_006999|PAPD7|11044|PAP associated domain containing 7	AF089896|PAPD7|11044|PAP associated domain containing 7	BC084567|PAPD7|11044|PAP associated domain containing 7
hg18_v1_chr20_+_9443426_9443499	0.0184294	SOX2.p2	CR612846|C20orf103|24141|chromosome 20 open reading frame 103
hg18_v1_chr8_-_30826074_30826149	0.0184165	SOX2.p2	AF285605|TEX15|56154|testis expressed 15	NM_031271|TEX15|56154|testis expressed 15	BC140934|TEX15|56154|testis expressed 15
hg18_v1_chr2_-_30883775_30883820	0.0183776	SOX2.p2	BC117345|CAPN13|92291|calpain 13	BC117347|CAPN13|92291|calpain 13	AK308037|CAPN13|92291|calpain 13	AK074418|CAPN13|92291|calpain 13	BX640793|CAPN13|92291|calpain 13	NM_144575|CAPN13|92291|calpain 13	AK290298|CAPN13|92291|calpain 13
hg18_v1_chr17_-_24069299_24069412	0.0183724	SOX2.p2	AF327350|RAB34|83871|RAB34, member RAS oncogene family	AK297850|RAB34|83871|RAB34, member RAS oncogene family	AK027312|RAB34|83871|RAB34, member RAS oncogene family	AJ277106|RAB34|83871|RAB34, member RAS oncogene family	AK304633|RAB34|83871|RAB34, member RAS oncogene family	BC066904|RAB34|83871|RAB34, member RAS oncogene family	NM_001142624|RAB34|83871|RAB34, member RAS oncogene family	NM_001142625|RAB34|83871|RAB34, member RAS oncogene family	NM_001144943|RAB34|83871|RAB34, member RAS oncogene family
hg18_v1_chr7_-_148788799_148788985	0.0182858	SOX2.p2	AB033111|ZNF777|27153|zinc finger protein 777	NM_015694|ZNF777|27153|zinc finger protein 777
hg18_v1_chr6_-_33864876_33864881	0.0182609	SOX2.p2	CR606517|LEMD2|221496|LEM domain containing 2
hg18_v1_chr17_-_27693246_27693394	0.0181952	SOX2.p2	AF052093|C17orf75|64149|chromosome 17 open reading frame 75	CR618435|C17orf75|64149|chromosome 17 open reading frame 75	BC054035|C17orf75|64149|chromosome 17 open reading frame 75	CR599009|C17orf75|64149|chromosome 17 open reading frame 75	BC047325|C17orf75|64149|chromosome 17 open reading frame 75	BC026017|C17orf75|64149|chromosome 17 open reading frame 75	BC035715|C17orf75|64149|chromosome 17 open reading frame 75	AF305686|C17orf75|64149|chromosome 17 open reading frame 75	NM_022344|C17orf75|64149|chromosome 17 open reading frame 75
hg18_v1_chr7_-_88262966_88262966	0.018182	SOX2.p2	BC028365|C7orf62|219557|chromosome 7 open reading frame 62	NM_152706|C7orf62|219557|chromosome 7 open reading frame 62
hg18_v1_chr8_+_86344984_86345007	0.0180793	SOX2.p2	BC052602|CA13|377677|carbonic anhydrase XIII
hg18_v1_chr6_+_57062918_57062926	0.0180499	SOX2.p2	AK302577|ZNF451|26036|zinc finger protein 451
hg18_v1_chr16_+_87164158_87164309	0.0180444	SOX2.p2	NM_144604|ZC3H18|124245|zinc finger CCCH-type containing 18
hg18_v1_chr12_-_21702036_21702045	0.0180213	SOX2.p2	AK312328|LDHB|3945|lactate dehydrogenase B	CR606657|LDHB|3945|lactate dehydrogenase B	BC015122|LDHB|3945|lactate dehydrogenase B
hg18_v1_chr10_+_121400926_121400927	0.0180177	SOX2.p2	AK313026|BAG3|9531|BCL2-associated athanogene 3
hg18_v1_chr7_+_148523486_148523759	0.0180045	SOX2.p2	D30612|ZNF282|8427|zinc finger protein 282	NM_003575|ZNF282|8427|zinc finger protein 282	AK299280|ZNF282|8427|zinc finger protein 282	BC073805|ZNF282|8427|zinc finger protein 282	AK316282|ZNF282|8427|zinc finger protein 282	BC055287|ZNF282|8427|zinc finger protein 282	BC041704|ZNF282|8427|zinc finger protein 282
hg18_v1_chr6_-_111243023_111243067	0.0179809	SOX2.p2	AB028951|CDK19|23097|cyclin-dependent kinase 19
hg18_v1_chr9_-_131637361_131637380	0.017906	SOX2.p2	AK057004|C9orf78|51759|chromosome 9 open reading frame 78	CR608293|C9orf78|51759|chromosome 9 open reading frame 78	AF151054|C9orf78|51759|chromosome 9 open reading frame 78
hg18_v1_chr22_+_42908548_42908567	0.0178815	SOX2.p2	AK307299|PARVG|64098|parvin, gamma
hg18_v1_chrX_-_76928142_76928232	0.0178666	SOX2.p2	AB102641|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	BT007188|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	BC002521|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked
hg18_v1_chrX_-_116991728_116991787	0.0178435	SOX2.p2	AK125356|KLHL13|90293|kelch-like 13 (Drosophila)	NM_033495|KLHL13|90293|kelch-like 13 (Drosophila)	NM_001168300|KLHL13|90293|kelch-like 13 (Drosophila)
hg18_v1_chr10_-_18988172_18988234	0.0178411	SOX2.p2	
hg18_v1_chr6_-_167195987_167196010	0.0177985	SOX2.p2	AK095751|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2
hg18_v1_chr14_+_49430109_49430204	0.0177884	SOX2.p2	AF047432|ARF6|382|ADP-ribosylation factor 6	AF493885|ARF6|382|ADP-ribosylation factor 6	BT019868|ARF6|382|ADP-ribosylation factor 6	CR541939|ARF6|382|ADP-ribosylation factor 6	CR541964|ARF6|382|ADP-ribosylation factor 6
hg18_v1_chr15_-_88148177_88148182	0.0177576	SOX2.p2	AK298134|ANPEP|290|alanyl (membrane) aminopeptidase
hg18_v1_chr8_+_86344945_86344973	0.0177508	SOX2.p2	NM_198584|CA13|377677|carbonic anhydrase XIII
hg18_v1_chr20_+_34603290_34603310	0.017719	SOX2.p2	NM_006097|MYL9|10398|myosin, light chain 9, regulatory	NM_181526|MYL9|10398|myosin, light chain 9, regulatory
hg18_v1_chr8_+_75899326_75899326	0.0177168	SOX2.p2	CR749657|PI15|51050|peptidase inhibitor 15	NM_015886|PI15|51050|peptidase inhibitor 15
hg18_v1_chr3_-_101077605_101077757	0.0176995	SOX2.p2	EU531865|FILIP1L|11259|filamin A interacting protein 1-like	EU531866|FILIP1L|11259|filamin A interacting protein 1-like	BC027860|FILIP1L|11259|filamin A interacting protein 1-like	AK225855|FILIP1L|11259|filamin A interacting protein 1-like	AK096195|FILIP1L|11259|filamin A interacting protein 1-like	NM_014890|FILIP1L|11259|filamin A interacting protein 1-like
hg18_v1_chr2_-_10870306_10870437	0.0176694	SOX2.p2	CR606263|PDIA6|10130|protein disulfide isomerase family A, member 6	CR614510|PDIA6|10130|protein disulfide isomerase family A, member 6	CR624923|PDIA6|10130|protein disulfide isomerase family A, member 6	CR617062|PDIA6|10130|protein disulfide isomerase family A, member 6	CR595714|PDIA6|10130|protein disulfide isomerase family A, member 6	CR606166|PDIA6|10130|protein disulfide isomerase family A, member 6	AK294347|PDIA6|10130|protein disulfide isomerase family A, member 6	CR602648|PDIA6|10130|protein disulfide isomerase family A, member 6	CR607388|PDIA6|10130|protein disulfide isomerase family A, member 6	CR594255|PDIA6|10130|protein disulfide isomerase family A, member 6	CR622384|PDIA6|10130|protein disulfide isomerase family A, member 6	CR595577|PDIA6|10130|protein disulfide isomerase family A, member 6	CR593821|PDIA6|10130|protein disulfide isomerase family A, member 6	CR599723|PDIA6|10130|protein disulfide isomerase family A, member 6	CR590867|PDIA6|10130|protein disulfide isomerase family A, member 6	CR601561|PDIA6|10130|protein disulfide isomerase family A, member 6	CR620116|PDIA6|10130|protein disulfide isomerase family A, member 6	D49489|PDIA6|10130|protein disulfide isomerase family A, member 6	CR602748|PDIA6|10130|protein disulfide isomerase family A, member 6	BC001312|PDIA6|10130|protein disulfide isomerase family A, member 6	CR595109|PDIA6|10130|protein disulfide isomerase family A, member 6	CR608933|PDIA6|10130|protein disulfide isomerase family A, member 6	NM_005742|PDIA6|10130|protein disulfide isomerase family A, member 6
hg18_v1_chr14_-_105206106_105206249	0.017628	SOX2.p2	
hg18_v1_chr17_+_26060617_26060782	0.0176272	SOX2.p2	
hg18_v1_chr8_+_80685927_80685928	0.017624	SOX2.p2	CR591212|STMN2|11075|stathmin-like 2	CR618531|STMN2|11075|stathmin-like 2	CR609968|STMN2|11075|stathmin-like 2
hg18_v1_chr4_+_72078255_72078416	0.0176014	SOX2.p2	M60527|DCK|1633|deoxycytidine kinase	BC114617|DCK|1633|deoxycytidine kinase	BT019941|DCK|1633|deoxycytidine kinase	BT019942|DCK|1633|deoxycytidine kinase	CR536527|DCK|1633|deoxycytidine kinase	CR541876|DCK|1633|deoxycytidine kinase
hg18_v1_chr11_-_107234702_107234729	0.0175991	SOX2.p2	CR595056|SLC35F2|54733|solute carrier family 35, member F2	AK023080|SLC35F2|54733|solute carrier family 35, member F2	BC048302|SLC35F2|54733|solute carrier family 35, member F2
hg18_v1_chr3_-_114047479_114047486	0.0175988	SOX2.p2	BC144504|CD200R1L|344807|CD200 receptor 1-like	BC144507|CD200R1L|344807|CD200 receptor 1-like	AY284976|CD200R1L|344807|CD200 receptor 1-like	AY552790|CD200R1L|344807|CD200 receptor 1-like	NM_001008784|CD200R1L|344807|CD200 receptor 1-like
hg18_v1_chr14_-_72995012_72995029	0.0175977	SOX2.p2	BX248781|NUMB|8650|numb homolog (Drosophila)
hg18_v1_chr1_+_182287388_182287578	0.0175226	SOX2.p2	AF288394|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	NM_001127394|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	NM_052965|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	CR612120|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	BC022030|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	CR606046|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	CR620942|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	AK098196|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	AK296655|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	AK307241|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)
hg18_v1_chr7_-_42243318_42243322	0.0175116	SOX2.p2	AK308429|GLI3|2737|GLI family zinc finger 3
hg18_v1_chr15_+_57067141_57067157	0.0174975	SOX2.p2	BC060862|RNF111|54778|ring finger protein 111	BX538130|RNF111|54778|ring finger protein 111	NM_017610|RNF111|54778|ring finger protein 111
hg18_v1_chr6_-_96131974_96132046	0.0174829	SOX2.p2	
hg18_v1_chr15_-_63147350_63147440	0.0174609	SOX2.p2	BC053734|RASL12|51285|RAS-like, family 12	NM_016563|RASL12|51285|RAS-like, family 12
hg18_v1_chr18_-_46977687_46977734	0.0174508	SOX2.p2	AY950679|MEX3C|51320|mex-3 homolog C (C. elegans)
hg18_v1_chr3_+_157071117_157071139	0.0173901	SOX2.p2	AK302148|GMPS|8833|guanine monphosphate synthetase	AK223399|GMPS|8833|guanine monphosphate synthetase	AK300787|GMPS|8833|guanine monphosphate synthetase
hg18_v1_chr21_-_29179482_29179586	0.0173887	SOX2.p2	CR612892|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)	CR620576|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)	BC011554|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)	AK314100|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)	AK225515|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)	AF139682|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)	NM_013240|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)	NM_182749|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)
hg18_v1_chr11_-_101828563_101829084	0.0173253	SOX2.p2	DQ891654|TMEM123|114908|transmembrane protein 123	DQ894842|TMEM123|114908|transmembrane protein 123	AY358696|TMEM123|114908|transmembrane protein 123	BC032296|TMEM123|114908|transmembrane protein 123	AY157580|TMEM123|114908|transmembrane protein 123	AK075420|TMEM123|114908|transmembrane protein 123	AY008283|TMEM123|114908|transmembrane protein 123	AK225790|TMEM123|114908|transmembrane protein 123	NM_052932|TMEM123|114908|transmembrane protein 123
hg18_v1_chr15_-_42790805_42790871	0.0172944	SOX2.p2	
hg18_v1_chr12_-_54996044_54996091	0.0172229	SOX2.p2	CR603286|CNPY2|10330|canopy 2 homolog (zebrafish)	CR596106|CNPY2|10330|canopy 2 homolog (zebrafish)	BC001027|CNPY2|10330|canopy 2 homolog (zebrafish)	AK312921|CNPY2|10330|canopy 2 homolog (zebrafish)
hg18_v1_chr1_-_201422533_201422565	0.0172002	SOX2.p2	NM_001276|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)
hg18_v1_chr21_+_46094301_46094331	0.0171739	SOX2.p2	CR614371|PCBP3|54039|poly(rC) binding protein 3	AF176329|PCBP3|54039|poly(rC) binding protein 3	NM_001130141|PCBP3|54039|poly(rC) binding protein 3	NM_020528|PCBP3|54039|poly(rC) binding protein 3	BC012061|PCBP3|54039|poly(rC) binding protein 3	AK310672|PCBP3|54039|poly(rC) binding protein 3
hg18_v1_chr12_-_11030777_11030777	0.0171594	SOX2.p2	BC112100|TAS2R50|259296|taste receptor, type 2, member 50	NM_176890|TAS2R50|259296|taste receptor, type 2, member 50
hg18_v1_chr2_-_86276403_86276403	0.0171299	SOX2.p2	NM_001100169|IMMT|10989|inner membrane protein, mitochondrial	NM_001100170|IMMT|10989|inner membrane protein, mitochondrial	NM_006839|IMMT|10989|inner membrane protein, mitochondrial
hg18_v1_chr3_+_110338250_110338256	0.0170731	SOX2.p2	AK026416|FLJ22763|401081|hypothetical LOC401081
hg18_v1_chr6_-_167195647_167195790	0.0170694	SOX2.p2	NM_001006932|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2	AB209116|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2
hg18_v1_chr5_+_34692124_34692216	0.0170422	SOX2.p2	NM_001145522|RAI14|26064|retinoic acid induced 14	NM_015577|RAI14|26064|retinoic acid induced 14
hg18_v1_chr21_-_33709037_33709120	0.0170303	SOX2.p2	
hg18_v1_chr5_-_10814179_10814340	0.0169938	SOX2.p2	CR542184|DAP|1611|death-associated protein	AK311783|DAP|1611|death-associated protein	CR607455|DAP|1611|death-associated protein	X76105|DAP|1611|death-associated protein	AK298670|DAP|1611|death-associated protein
hg18_v1_chrX_-_131401319_131401398	0.0169839	SOX2.p2	AF491305|MBNL3|55796|muscleblind-like 3 (Drosophila)	EU446986|MBNL3|55796|muscleblind-like 3 (Drosophila)	BC074775|MBNL3|55796|muscleblind-like 3 (Drosophila)	BC074776|MBNL3|55796|muscleblind-like 3 (Drosophila)	AB077698|MBNL3|55796|muscleblind-like 3 (Drosophila)	AB077699|MBNL3|55796|muscleblind-like 3 (Drosophila)	AF467070|MBNL3|55796|muscleblind-like 3 (Drosophila)	AJ427918|MBNL3|55796|muscleblind-like 3 (Drosophila)	AJ427919|MBNL3|55796|muscleblind-like 3 (Drosophila)	AY072692|MBNL3|55796|muscleblind-like 3 (Drosophila)	NM_018388|MBNL3|55796|muscleblind-like 3 (Drosophila)	NM_133486|MBNL3|55796|muscleblind-like 3 (Drosophila)
hg18_v1_chr1_+_32889335_32889545	0.0169715	SOX2.p2	NM_001135255|RBBP4|5928|retinoblastoma binding protein 4	NM_005610|RBBP4|5928|retinoblastoma binding protein 4	AK312571|RBBP4|5928|retinoblastoma binding protein 4	AK299410|RBBP4|5928|retinoblastoma binding protein 4	BC003092|RBBP4|5928|retinoblastoma binding protein 4	X74262|RBBP4|5928|retinoblastoma binding protein 4	X71810|RBBP4|5928|retinoblastoma binding protein 4	BC053904|RBBP4|5928|retinoblastoma binding protein 4	AK222779|RBBP4|5928|retinoblastoma binding protein 4	BC075836|RBBP4|5928|retinoblastoma binding protein 4	DQ892499|RBBP4|5928|retinoblastoma binding protein 4	DQ895712|RBBP4|5928|retinoblastoma binding protein 4	BT007309|RBBP4|5928|retinoblastoma binding protein 4	AK299251|RBBP4|5928|retinoblastoma binding protein 4	NM_001135256|RBBP4|5928|retinoblastoma binding protein 4
hg18_v1_chr19_+_18391423_18391457	0.0169683	SOX2.p2	
hg18_v1_chr11_+_440408_440473	0.0169475	SOX2.p2	DQ891743|PTDSS2|81490|phosphatidylserine synthase 2	DQ894922|PTDSS2|81490|phosphatidylserine synthase 2
hg18_v1_chr6_-_112034166_112034166	0.0169276	SOX2.p2	NM_001164281|TRAF3IP2|10758|TRAF3 interacting protein 2	NM_147686|TRAF3IP2|10758|TRAF3 interacting protein 2
hg18_v1_chr19_-_9087438_9087438	0.016891	SOX2.p2	NM_001005192|OR7G1|125962|olfactory receptor, family 7, subfamily G, member 1
hg18_v1_chr9_+_114671635_114671738	0.0168834	SOX2.p2	AK129991|SNX30|401548|sorting nexin family member 30
hg18_v1_chr3_-_52287695_52287698	0.0168763	SOX2.p2	NM_025222|WDR82|80335|WD repeat domain 82
hg18_v1_chr15_-_42743124_42743148	0.0168462	SOX2.p2	AB470308|SPG11|80208|spastic paraplegia 11 (autosomal recessive)	AB470309|SPG11|80208|spastic paraplegia 11 (autosomal recessive)	AB470310|SPG11|80208|spastic paraplegia 11 (autosomal recessive)	AB058743|SPG11|80208|spastic paraplegia 11 (autosomal recessive)	BC153879|SPG11|80208|spastic paraplegia 11 (autosomal recessive)	BC047416|SPG11|80208|spastic paraplegia 11 (autosomal recessive)
hg18_v1_chr21_+_37661063_37661169	0.0168351	SOX2.p2	AB015282|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A
hg18_v1_chr19_-_19487237_19487493	0.0167887	SOX2.p2	DQ891603|TSSK6|83983|testis-specific serine kinase 6	DQ894797|TSSK6|83983|testis-specific serine kinase 6	AF329483|TSSK6|83983|testis-specific serine kinase 6	AK058166|TSSK6|83983|testis-specific serine kinase 6	AK313767|TSSK6|83983|testis-specific serine kinase 6	BC014611|TSSK6|83983|testis-specific serine kinase 6	NM_032037|TSSK6|83983|testis-specific serine kinase 6	AF348077|TSSK6|83983|testis-specific serine kinase 6
hg18_v1_chr20_-_1420004_1420067	0.0167086	SOX2.p2	AY424277|SIRPB2|284759|signal-regulatory protein beta 2	AK095499|SIRPB2|284759|signal-regulatory protein beta 2	AK294440|SIRPB2|284759|signal-regulatory protein beta 2
hg18_v1_chr1_+_198263352_198263633	0.0166898	SOX2.p2	U93553|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	AF146343|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	NM_003822|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	NM_205860|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	BC027893|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	AB019246|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	BC118571|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	BC118652|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	U80251|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	AF124247|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2
hg18_v1_chr19_+_4983899_4983900	0.0166845	SOX2.p2	
hg18_v1_chr5_-_131907071_131907112	0.0166734	SOX2.p2	BC066279|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)	BC066280|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)	BC066281|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)	BC066282|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)	BC069137|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)	NM_000879|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)	X04688|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)	X12705|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)
hg18_v1_chr4_-_100070808_100070810	0.0166562	SOX2.p2	NM_001130679|EIF4E|1977|eukaryotic translation initiation factor 4E	NM_001968|EIF4E|1977|eukaryotic translation initiation factor 4E	BC035166|EIF4E|1977|eukaryotic translation initiation factor 4E
hg18_v1_chr11_+_55096179_55096179	0.0166492	SOX2.p2	NM_001004701|OR4C16|219428|olfactory receptor, family 4, subfamily C, member 16
hg18_v1_chr18_-_71049977_71050001	0.0166197	SOX2.p2	
hg18_v1_chr10_-_135290288_135290288	0.0166184	SOX2.p2	AY714545|FRG2|448831|FSHD region gene 2	AY744466|FRG2B|441581|FSHD region gene 2 family, member B	NM_001080998|FRG2B|441581|FSHD region gene 2 family, member B
hg18_v1_chr2_-_73860609_73860793	0.0165297	SOX2.p2	DQ891356|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	DQ894537|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	BC000346|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	AF023917|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	AK315271|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	CR627368|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	NM_003584|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)
hg18_v1_chr6_-_166502119_166502120	0.0165252	SOX2.p2	BC098425|T|6862|T, brachyury homolog (mouse)	NM_003181|T|6862|T, brachyury homolog (mouse)
hg18_v1_chrX_+_46977306_46977512	0.0165026	SOX2.p2	AK055588|USP11|8237|ubiquitin specific peptidase 11	AK098394|USP11|8237|ubiquitin specific peptidase 11	CR606453|USP11|8237|ubiquitin specific peptidase 11	BC073960|USP11|8237|ubiquitin specific peptidase 11	BC063668|USP11|8237|ubiquitin specific peptidase 11	AB073597|USP11|8237|ubiquitin specific peptidase 11	BC000350|USP11|8237|ubiquitin specific peptidase 11	U44839|USP11|8237|ubiquitin specific peptidase 11	AK294635|USP11|8237|ubiquitin specific peptidase 11
hg18_v1_chr15_+_72694387_72694387	0.0164129	SOX2.p2	AK091692|CLK3|1198|CDC-like kinase 3	NM_001130028|CLK3|1198|CDC-like kinase 3
hg18_v1_chr7_+_102502816_102502845	0.0163915	SOX2.p2	AK075500|ARMC10|83787|armadillo repeat containing 10	CR613788|ARMC10|83787|armadillo repeat containing 10	AK301565|ARMC10|83787|armadillo repeat containing 10	AK225082|ARMC10|83787|armadillo repeat containing 10	AK291818|ARMC10|83787|armadillo repeat containing 10	BC003586|ARMC10|83787|armadillo repeat containing 10
hg18_v1_chr19_+_48792383_48792383	0.0163787	SOX2.p2	AK026353|ZNF576|79177|zinc finger protein 576	NM_024327|ZNF576|79177|zinc finger protein 576
hg18_v1_chr17_-_31369046_31369117	0.0163714	SOX2.p2	U67128|CCL23|6368|chemokine (C-C motif) ligand 23	U85767|CCL23|6368|chemokine (C-C motif) ligand 23	BC093970|CCL23|6368|chemokine (C-C motif) ligand 23	BC143310|CCL23|6368|chemokine (C-C motif) ligand 23	NM_005064|CCL23|6368|chemokine (C-C motif) ligand 23	NM_145898|CCL23|6368|chemokine (C-C motif) ligand 23	U58913|CCL23|6368|chemokine (C-C motif) ligand 23
hg18_v1_chr17_+_27701291_27701298	0.0163692	SOX2.p2	AK298950|ZNF207|7756|zinc finger protein 207	AK226172|ZNF207|7756|zinc finger protein 207
hg18_v1_chr16_+_24174374_24174376	0.0163629	SOX2.p2	BC037899|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3	AK095553|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3	NM_006539|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3
hg18_v1_chr5_-_171643247_171643372	0.0163066	SOX2.p2	BC019910|UBTD2|92181|ubiquitin domain containing 2	CR591327|UBTD2|92181|ubiquitin domain containing 2	AK313274|UBTD2|92181|ubiquitin domain containing 2
hg18_v1_chr11_+_64646275_64646377	0.0162798	SOX2.p2	NM_004927|MRPL49|740|mitochondrial ribosomal protein L49	CR600382|MRPL49|740|mitochondrial ribosomal protein L49	AK129986|MRPL49|740|mitochondrial ribosomal protein L49	AK311821|MRPL49|740|mitochondrial ribosomal protein L49	AK129795|MRPL49|740|mitochondrial ribosomal protein L49	CR625371|MRPL49|740|mitochondrial ribosomal protein L49
hg18_v1_chr7_-_130004119_130004151	0.0162001	SOX2.p2	AK291409|COPG2|26958|coatomer protein complex, subunit gamma 2	NM_012133|COPG2|26958|coatomer protein complex, subunit gamma 2
hg18_v1_chrX_+_152891184_152891184	0.0161984	SOX2.p2	CR613909|TMEM187|8269|transmembrane protein 187	NM_003492|TMEM187|8269|transmembrane protein 187
hg18_v1_chr1_+_1104939_1104972	0.0161924	SOX2.p2	AK093438|TTLL10|254173|tubulin tyrosine ligase-like family, member 10	NM_153254|TTLL10|254173|tubulin tyrosine ligase-like family, member 10	BC126152|TTLL10|254173|tubulin tyrosine ligase-like family, member 10	BC126154|TTLL10|254173|tubulin tyrosine ligase-like family, member 10
hg18_v1_chr7_+_16533029_16533029	0.0161665	SOX2.p2	NM_001195280|LOC100129335|100129335|leucine-rich repeat-containing protein ENSP00000371558
hg18_v1_chr1_+_112099703_112099781	0.0161307	SOX2.p2	NM_007204|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20	BC034953|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20	AF171063|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20
hg18_v1_chr12_-_100979869_100979891	0.0160985	SOX2.p2	CR457171|CCDC53|51019|coiled-coil domain containing 53	CR609797|CCDC53|51019|coiled-coil domain containing 53
hg18_v1_chrX_-_111953009_111953009	0.0160788	SOX2.p2	AY987378|AMOT|154796|angiomotin	NM_001113490|AMOT|154796|angiomotin
hg18_v1_chr9_-_94226380_94226656	0.0160316	SOX2.p2	AB000114|OMD|4958|osteomodulin	AK313055|OMD|4958|osteomodulin	AK225922|OMD|4958|osteomodulin	AY358872|OMD|4958|osteomodulin	BC046356|OMD|4958|osteomodulin	NM_005014|OMD|4958|osteomodulin
hg18_v1_chr1_-_148507779_148508023	0.0160308	SOX2.p2	CR601650|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AF508787|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AY113698|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AY113699|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AF151835|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK075295|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR594321|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR594282|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR596144|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR626054|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR626622|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	BC017699|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR613868|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR626391|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR609960|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR626805|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR597912|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR610823|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR603099|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR591331|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	BC008732|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	BC001230|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	BC015568|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK297680|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK298876|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK027879|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK314490|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR612872|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR605320|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR609243|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR618014|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR607278|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	BC020590|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	BC009501|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR609659|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)
hg18_v1_chr9_-_139202831_139202842	0.0159914	SOX2.p2	AK294601|ANAPC2|29882|anaphase promoting complex subunit 2
hg18_v1_chr5_-_43349338_43349369	0.0159799	SOX2.p2	NM_001098272|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)	NM_002130|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)
hg18_v1_chr4_+_113777568_113777568	0.0159674	SOX2.p2	NM_016648|LARP7|51574|La ribonucleoprotein domain family, member 7
hg18_v1_chr12_-_43556899_43556899	0.0159601	SOX2.p2	AK299733|NELL2|4753|NEL-like 2 (chicken)	NM_001145107|NELL2|4753|NEL-like 2 (chicken)
hg18_v1_chr12_-_9913724_9913724	0.0159439	SOX2.p2	NM_005127|CLEC2B|9976|C-type lectin domain family 2, member B
hg18_v1_chr1_-_245237952_245237957	0.0159129	SOX2.p2	BC041082|ZNF695|57116|zinc finger protein 695
hg18_v1_chr10_+_22645370_22645412	0.01589	SOX2.p2	CR623274|COMMD3|23412|COMM domain containing 3
hg18_v1_chr17_-_70770036_70770038	0.0158809	SOX2.p2	AK301895|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3	AK302278|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3	NM_001172703|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3	NM_001172704|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3
hg18_v1_chr15_-_29070909_29071210	0.0158569	SOX2.p2	AK000320|MTMR10|54893|myotubularin related protein 10	AM392869|MTMR10|54893|myotubularin related protein 10	BC094750|MTMR10|54893|myotubularin related protein 10	CR607167|MTMR10|54893|myotubularin related protein 10	BC063296|MTMR10|54893|myotubularin related protein 10	NM_017762|MTMR10|54893|myotubularin related protein 10
hg18_v1_chr9_+_39345665_39345706	0.015847	SOX2.p2	AK302569|FAM75A2|642265|family with sequence similarity 75, member A2	NM_001040065|FAM75A2|642265|family with sequence similarity 75, member A2	NM_001085452|FAM75A1|647060|family with sequence similarity 75, member A1	BC146855|FAM75A2|642265|family with sequence similarity 75, member A2
hg18_v1_chr11_-_118167066_118167072	0.0158431	SOX2.p2	BC026228|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
hg18_v1_chr1_+_224317036_224317043	0.0158345	SOX2.p2	D28384|H3F3A|3020|H3 histone, family 3A	NM_002107|H3F3A|3020|H3 histone, family 3A
hg18_v1_chr15_-_68177244_68177258	0.0158293	SOX2.p2	CR603419|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)
hg18_v1_chr1_+_224317056_224317059	0.0158211	SOX2.p2	BC081560|LOC440926|440926|H3 histone, family 3A pseudogene	BC081561|H3F3A|3020|H3 histone, family 3A	CR594691|LOC440926|440926|H3 histone, family 3A pseudogene	CR600004|H3F3A|3020|H3 histone, family 3A	CR625697|LOC440926|440926|H3 histone, family 3A pseudogene
hg18_v1_chr17_-_44026042_44026157	0.015802	SOX2.p2	BC117247|HOXB5|3215|homeobox B5	NM_002147|HOXB5|3215|homeobox B5	AK314964|HOXB5|3215|homeobox B5
hg18_v1_chr22_+_18485057_18485066	0.0157487	SOX2.p2	CR590513|RANBP1|5902|RAN binding protein 1
hg18_v1_chr19_+_9799561_9799580	0.01574	SOX2.p2	AK128885|UBL5|59286|ubiquitin-like 5	AK311889|UBL5|59286|ubiquitin-like 5	NM_001048241|UBL5|59286|ubiquitin-like 5	NM_024292|UBL5|59286|ubiquitin-like 5
hg18_v1_chr6_-_79844658_79844894	0.0157201	SOX2.p2	AK057039|PHIP|55023|pleckstrin homology domain interacting protein	NM_017934|PHIP|55023|pleckstrin homology domain interacting protein
hg18_v1_chr11_+_67871999_67872026	0.0157106	SOX2.p2	AF088027|LRP5|4041|low density lipoprotein receptor-related protein 5
hg18_v1_chr3_-_198960964_198960964	0.0156967	SOX2.p2	NM_001145642|KIAA0226|9711|KIAA0226
hg18_v1_chr1_+_15883403_15883418	0.0156496	SOX2.p2	BC040441|PLEKHM2|23207|pleckstrin homology domain containing, family M (with RUN domain) member 2	NM_015164|PLEKHM2|23207|pleckstrin homology domain containing, family M (with RUN domain) member 2
hg18_v1_chr12_-_21702000_21702019	0.0156377	SOX2.p2	AK129881|LDHB|3945|lactate dehydrogenase B	CR602865|LDHB|3945|lactate dehydrogenase B	CR612775|LDHB|3945|lactate dehydrogenase B
hg18_v1_chr19_+_13090101_13090150	0.0156172	SOX2.p2	NM_052876|NACC1|112939|nucleus accumbens associated 1, BEN and BTB (POZ) domain containing	BC055396|NACC1|112939|nucleus accumbens associated 1, BEN and BTB (POZ) domain containing	AF395817|NACC1|112939|nucleus accumbens associated 1, BEN and BTB (POZ) domain containing
hg18_v1_chr12_-_30740011_30740064	0.015599	SOX2.p2	U77494|IPO8|10526|importin 8
hg18_v1_chrX_-_54841397_54841397	0.0155723	SOX2.p2	AY358170|ITIH5L|347365|inter-alpha (globulin) inhibitor H5-like	NM_198510|ITIH5L|347365|inter-alpha (globulin) inhibitor H5-like
hg18_v1_chr15_-_68177283_68177312	0.0155669	SOX2.p2	BC012004|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	AB046767|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	AK315058|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	BC043247|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	NM_001105192|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	NM_005078|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	NM_020908|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)
hg18_v1_chr5_-_177986678_177986694	0.0155457	SOX2.p2	AK308879|CLK4|57396|CDC-like kinase 4	BC151233|CLK4|57396|CDC-like kinase 4
hg18_v1_chr14_+_51397113_51397115	0.0155202	SOX2.p2	AK001024|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2
hg18_v1_chrX_-_153952447_153952836	0.0154964	SOX2.p2	CR613140|MTCP1NB|100272147|mature T-cell proliferation 1 neighbor	BC002600|MTCP1NB|100272147|mature T-cell proliferation 1 neighbor	X64644|MTCP1NB|100272147|mature T-cell proliferation 1 neighbor	NM_001018024|MTCP1NB|100272147|mature T-cell proliferation 1 neighbor	NM_001018025|MTCP1|4515|mature T-cell proliferation 1	CR604905|MTCP1NB|100272147|mature T-cell proliferation 1 neighbor
hg18_v1_chr9_+_132700462_132700515	0.0154904	SOX2.p2	M30833|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase	X16416|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase
hg18_v1_chrX_+_142794838_142794838	0.0154882	SOX2.p2	NM_001012989|UBE2NL|389898|ubiquitin-conjugating enzyme E2N-like
hg18_v1_chr17_+_69875140_69875239	0.015478	SOX2.p2	BC143807|GPR142|350383|G protein-coupled receptor 142	AB196530|GPR142|350383|G protein-coupled receptor 142	AY288421|GPR142|350383|G protein-coupled receptor 142	NM_181790|GPR142|350383|G protein-coupled receptor 142
hg18_v1_chr14_+_104851948_104852223	0.0154688	SOX2.p2	AB011174|PACS2|23241|phosphofurin acidic cluster sorting protein 2	NM_001100913|PACS2|23241|phosphofurin acidic cluster sorting protein 2	NM_015197|PACS2|23241|phosphofurin acidic cluster sorting protein 2	BC065220|PACS2|23241|phosphofurin acidic cluster sorting protein 2
hg18_v1_chr9_-_131637382_131637419	0.0154615	SOX2.p2	NM_016520|C9orf78|51759|chromosome 9 open reading frame 78
hg18_v1_chr5_-_1397941_1398104	0.01544	SOX2.p2	AB045223|CLPTM1L|81037|CLPTM1-like	DQ892147|CLPTM1L|81037|CLPTM1-like	DQ895343|CLPTM1L|81037|CLPTM1-like	AK027306|CLPTM1L|81037|CLPTM1-like	BC025305|CLPTM1L|81037|CLPTM1-like	NM_030782|CLPTM1L|81037|CLPTM1-like
hg18_v1_chr19_+_15058790_15058876	0.0154169	SOX2.p2	BC140930|OR1I1|126370|olfactory receptor, family 1, subfamily I, member 1	NM_001004713|OR1I1|126370|olfactory receptor, family 1, subfamily I, member 1
hg18_v1_chr11_-_5494391_5494531	0.0153966	SOX2.p2	BC012183|UBQLNL|143630|ubiquilin-like	BC034977|UBQLNL|143630|ubiquilin-like	AK057255|UBQLNL|143630|ubiquilin-like	NM_145053|UBQLNL|143630|ubiquilin-like
hg18_v1_chr5_-_147191428_147191452	0.0153896	SOX2.p2	NM_003122|SPINK1|6690|serine peptidase inhibitor, Kazal type 1
hg18_v1_chr16_-_4502980_4503124	0.0153401	SOX2.p2	AK311295|C16orf5|29965|chromosome 16 open reading frame 5	BC007604|C16orf5|29965|chromosome 16 open reading frame 5
hg18_v1_chr19_+_63482118_63482258	0.0152894	SOX2.p2	AK093110|ZNF8|7554|zinc finger protein 8	NM_021089|ZNF8|7554|zinc finger protein 8	AK225825|ZNF8|7554|zinc finger protein 8	AK299716|ZNF8|7554|zinc finger protein 8	BC039323|ZNF8|7554|zinc finger protein 8	EU446717|ZNF8|7554|zinc finger protein 8
hg18_v1_chr1_-_44255583_44255598	0.0152877	SOX2.p2	NM_006934|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9	NM_201649|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9	S70609|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9	S70612|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9	AK315233|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9
hg18_v1_chr19_+_54299686_54299780	0.0152588	SOX2.p2	CR613069|SNRNP70|6625|small nuclear ribonucleoprotein 70kDa (U1)	X06814|SNRNP70|6625|small nuclear ribonucleoprotein 70kDa (U1)
hg18_v1_chr6_-_31741369_31741386	0.0152475	SOX2.p2	CR618833|GPANK1|7918|G patch domain and ankyrin repeats 1
hg18_v1_chr6_-_132980901_132980924	0.0152461	SOX2.p2	AY702304|TAAR2|9287|trace amine associated receptor 2	BC067461|TAAR2|9287|trace amine associated receptor 2	BC067462|TAAR2|9287|trace amine associated receptor 2	BC067463|TAAR2|9287|trace amine associated receptor 2	NM_014626|TAAR2|9287|trace amine associated receptor 2
hg18_v1_chr19_-_2691053_2691081	0.0152451	SOX2.p2	NM_144564|SLC39A3|29985|solute carrier family 39 (zinc transporter), member 3	NM_213568|SLC39A3|29985|solute carrier family 39 (zinc transporter), member 3
hg18_v1_chr7_-_6354933_6355138	0.0152373	SOX2.p2	AK311878|C7orf70|84792|chromosome 7 open reading frame 70	AF533707|C7orf70|84792|chromosome 7 open reading frame 70	BC006110|C7orf70|84792|chromosome 7 open reading frame 70	NM_001037163|C7orf70|84792|chromosome 7 open reading frame 70	BC142977|C7orf70|84792|chromosome 7 open reading frame 70
hg18_v1_chr1_-_184696839_184696861	0.0152245	SOX2.p2	M33478|PDC|5132|phosducin	NM_002597|PDC|5132|phosducin
hg18_v1_chr15_-_24513004_24513004	0.0151496	SOX2.p2	AK302822|GABRB3|2562|gamma-aminobutyric acid (GABA) A receptor, beta 3	NM_001191320|GABRB3|2562|gamma-aminobutyric acid (GABA) A receptor, beta 3
hg18_v1_chr3_+_2528272_2528289	0.0151476	SOX2.p2	AK095729|CNTN4|152330|contactin 4
hg18_v1_chr12_-_54996098_54996394	0.0151188	SOX2.p2	AY032624|CNPY2|10330|canopy 2 homolog (zebrafish)	AY359102|CNPY2|10330|canopy 2 homolog (zebrafish)	NM_001190991|CNPY2|10330|canopy 2 homolog (zebrafish)	NM_014255|CNPY2|10330|canopy 2 homolog (zebrafish)
hg18_v1_chrX_-_100759562_100759646	0.015116	SOX2.p2	CR599653|ARMCX6|54470|armadillo repeat containing, X-linked 6	CR624030|ARMCX6|54470|armadillo repeat containing, X-linked 6	CR598648|ARMCX6|54470|armadillo repeat containing, X-linked 6	CR614615|ARMCX6|54470|armadillo repeat containing, X-linked 6	CR591698|ARMCX6|54470|armadillo repeat containing, X-linked 6	BC007677|ARMCX6|54470|armadillo repeat containing, X-linked 6	NM_001009584|ARMCX6|54470|armadillo repeat containing, X-linked 6	NM_001184768|ARMCX6|54470|armadillo repeat containing, X-linked 6	NM_019007|ARMCX6|54470|armadillo repeat containing, X-linked 6
hg18_v1_chr12_+_119391982_119392074	0.015015	SOX2.p2	NM_001037494|DYNLL1|8655|dynein, light chain, LC8-type 1
hg18_v1_chr16_-_22293097_22293496	0.0149826	SOX2.p2	DQ892203|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	DQ892204|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	DQ895399|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	D12981|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	AK292273|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	M63256|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	BC017503|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	NM_001802|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa
hg18_v1_chr1_-_101132993_101133005	0.0149535	SOX2.p2	NM_001033025|EXTL2|2135|exostoses (multiple)-like 2	NM_001439|EXTL2|2135|exostoses (multiple)-like 2
hg18_v1_chr14_+_90650220_90650311	0.0149466	SOX2.p2	AK023200|C14orf159|80017|chromosome 14 open reading frame 159
hg18_v1_chr1_+_96959762_96959982	0.0149461	SOX2.p2	NM_021190|PTBP2|58155|polypyrimidine tract binding protein 2	AK092216|PTBP2|58155|polypyrimidine tract binding protein 2	AB051232|PTBP2|58155|polypyrimidine tract binding protein 2	AK299755|PTBP2|58155|polypyrimidine tract binding protein 2	AK299922|PTBP2|58155|polypyrimidine tract binding protein 2	AB209266|PTBP2|58155|polypyrimidine tract binding protein 2	AF530580|PTBP2|58155|polypyrimidine tract binding protein 2	AF530581|PTBP2|58155|polypyrimidine tract binding protein 2	AF176085|PTBP2|58155|polypyrimidine tract binding protein 2	AK299897|PTBP2|58155|polypyrimidine tract binding protein 2	BC016582|PTBP2|58155|polypyrimidine tract binding protein 2	AB051233|PTBP2|58155|polypyrimidine tract binding protein 2
hg18_v1_chr1_+_149897334_149897386	0.0149401	SOX2.p2	BC107862|SNX27|81609|sorting nexin family member 27
hg18_v1_chr6_-_131333173_131333315	0.0148676	SOX2.p2	AK307764|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2
hg18_v1_chr13_+_21143083_21143214	0.0148563	SOX2.p2	AK290792|FGF9|2254|fibroblast growth factor 9 (glia-activating factor)	NM_002010|FGF9|2254|fibroblast growth factor 9 (glia-activating factor)
hg18_v1_chr6_-_88468703_88468711	0.0148561	SOX2.p2	AK001204|AKIRIN2|55122|akirin 2	NM_018064|AKIRIN2|55122|akirin 2
hg18_v1_chr14_+_20283938_20283967	0.0147285	SOX2.p2	NM_006683|EDDM3A|10876|epididymal protein 3A	X76383|EDDM3A|10876|epididymal protein 3A	BC096698|EDDM3A|10876|epididymal protein 3A	BC096731|EDDM3A|10876|epididymal protein 3A	BC069407|EDDM3A|10876|epididymal protein 3A
hg18_v1_chr5_+_72287509_72287573	0.014681	SOX2.p2	BC137070|FCHO2|115548|FCH domain only 2	NM_001146032|FCHO2|115548|FCH domain only 2	NM_138782|FCHO2|115548|FCH domain only 2
hg18_v1_chr3_+_125296217_125296374	0.0146028	SOX2.p2	AK314126|KALRN|8997|kalirin, RhoGEF kinase	AK311154|KALRN|8997|kalirin, RhoGEF kinase	NM_001024660|KALRN|8997|kalirin, RhoGEF kinase	NM_003947|KALRN|8997|kalirin, RhoGEF kinase	AK311581|KALRN|8997|kalirin, RhoGEF kinase	U94190|KALRN|8997|kalirin, RhoGEF kinase	BC037924|KALRN|8997|kalirin, RhoGEF kinase
hg18_v1_chr17_-_37196463_37196555	0.0145735	SOX2.p2	AK226051|JUP|3728|junction plakoglobin	M23410|JUP|3728|junction plakoglobin	Z68228|JUP|3728|junction plakoglobin	BC000441|JUP|3728|junction plakoglobin	NM_002230|JUP|3728|junction plakoglobin	NM_021991|JUP|3728|junction plakoglobin
hg18_v1_chr2_+_73973600_73973619	0.0145482	SOX2.p2	NM_001615|ACTG2|72|actin, gamma 2, smooth muscle, enteric
hg18_v1_chr19_+_11327173_11327218	0.0145427	SOX2.p2	AK094869|LPPR2|64748|lipid phosphate phosphatase-related protein type 2	BC009378|LPPR2|64748|lipid phosphate phosphatase-related protein type 2
hg18_v1_chr17_+_43480674_43480722	0.0145063	SOX2.p2	NM_003204|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1	BC010623|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1	AK090459|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1
hg18_v1_chr12_+_64869296_64869345	0.0144985	SOX2.p2	BC069388|IRAK3|11213|interleukin-1 receptor-associated kinase 3	AK298645|IRAK3|11213|interleukin-1 receptor-associated kinase 3
hg18_v1_chr6_+_57062937_57062943	0.0144833	SOX2.p2	BX648081|ZNF451|26036|zinc finger protein 451
hg18_v1_chr11_-_58099884_58099965	0.0144733	SOX2.p2	BC007490|LPXN|9404|leupaxin	BC019035|LPXN|9404|leupaxin	CR591836|LPXN|9404|leupaxin	CR612739|LPXN|9404|leupaxin	AK313306|LPXN|9404|leupaxin	AK223165|LPXN|9404|leupaxin	AK301093|LPXN|9404|leupaxin	AF062075|LPXN|9404|leupaxin	NM_004811|LPXN|9404|leupaxin
hg18_v1_chr9_-_122877231_122877272	0.0144598	SOX2.p2	AB209031|C5|727|complement component 5
hg18_v1_chr13_-_35818777_35818939	0.0144546	SOX2.p2	BX648004|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)	NM_001142295|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)
hg18_v1_chr3_-_180805104_180805129	0.0144371	SOX2.p2	AY212270|MRPL47|57129|mitochondrial ribosomal protein L47	BC032522|MRPL47|57129|mitochondrial ribosomal protein L47	BC021575|MRPL47|57129|mitochondrial ribosomal protein L47	NM_020409|MRPL47|57129|mitochondrial ribosomal protein L47	NM_177988|MRPL47|57129|mitochondrial ribosomal protein L47
hg18_v1_chr19_-_14490160_14490226	0.0144102	SOX2.p2	CR536485|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1	CR541677|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1	CR620425|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1	BC019827|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1	BC002352|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1	BC013157|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1	D49547|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1	NM_006145|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1	X62421|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1
hg18_v1_chr13_-_44048391_44048470	0.0144051	SOX2.p2	AK091854|TSC22D1|8848|TSC22 domain family, member 1	BC136475|TSC22D1|8848|TSC22 domain family, member 1	BC136482|TSC22D1|8848|TSC22 domain family, member 1
hg18_v1_chr12_+_99185334_99185679	0.0144033	SOX2.p2	AK292980|SCYL2|55681|SCY1-like 2 (S. cerevisiae)	BC063798|SCYL2|55681|SCY1-like 2 (S. cerevisiae)	NM_017988|SCYL2|55681|SCY1-like 2 (S. cerevisiae)
hg18_v1_chr7_+_2638108_2638150	0.0143954	SOX2.p2	NM_025250|TTYH3|80727|tweety homolog 3 (Drosophila)	AB051478|TTYH3|80727|tweety homolog 3 (Drosophila)	BC152447|TTYH3|80727|tweety homolog 3 (Drosophila)
hg18_v1_chr7_+_116289765_116289821	0.0143766	SOX2.p2	NM_006136|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	CR615735|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2
hg18_v1_chr3_+_43303005_43303141	0.0143723	SOX2.p2	AK291360|SNRK|54861|SNF related kinase	NM_001100594|SNRK|54861|SNF related kinase	NM_017719|SNRK|54861|SNF related kinase	BC071567|SNRK|54861|SNF related kinase	AK295187|SNRK|54861|SNF related kinase	CR749621|SNRK|54861|SNF related kinase	AK314376|SNRK|54861|SNF related kinase
hg18_v1_chr5_-_147996769_147996816	0.0143622	SOX2.p2	AJ633645|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	AM712912|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	Y10437|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	Y13584|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	AJ011371|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	BC095497|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	Y09586|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	AJ131725|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	AJ131726|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	AJ278979|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	AJ278980|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	AJ278981|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	AJ278982|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	Y08756|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	Y12505|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	Y12506|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	Y12507|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	AJ519673|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	BC074755|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	NM_001040169|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	NM_001040172|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	NM_001040173|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	NM_199453|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4
hg18_v1_chr1_+_53300410_53300488	0.0143215	SOX2.p2	AY358294|PODN|127435|podocan	AK314096|PODN|127435|podocan	AK300847|PODN|127435|podocan	AK296649|PODN|127435|podocan	AK299375|PODN|127435|podocan	AK304599|PODN|127435|podocan	AY313607|PODN|127435|podocan	BC030608|PODN|127435|podocan	NM_153703|PODN|127435|podocan	BC028292|PODN|127435|podocan
hg18_v1_chr12_+_111375382_111375523	0.0143108	SOX2.p2	EU779706|PTPN11|5781|protein tyrosine phosphatase, non-receptor type 11
hg18_v1_chr17_+_17339059_17339164	0.0142172	SOX2.p2	
hg18_v1_chr17_+_63338500_63338579	0.0142028	SOX2.p2	AK025776|BPTF|2186|bromodomain PHD finger transcription factor
hg18_v1_chr11_+_737449_737483	0.0141953	SOX2.p2	AK295537|TALDO1|6888|transaldolase 1	AK313427|TALDO1|6888|transaldolase 1	BC018847|TALDO1|6888|transaldolase 1
hg18_v1_chr15_-_80611897_80611999	0.0141856	SOX2.p2	BC009407|RPS17|6218|ribosomal protein S17	CR618357|RPS17|6218|ribosomal protein S17	BC071928|RPS17|6218|ribosomal protein S17	M13932|RPS17|6218|ribosomal protein S17	AK311951|RPS17|6218|ribosomal protein S17	BC070222|RPS17|6218|ribosomal protein S17	BC022370|RPS17|6218|ribosomal protein S17	NM_001021|RPS17|6218|ribosomal protein S17	BC062715|RPS17|6218|ribosomal protein S17
hg18_v1_chr2_+_169021039_169021204	0.014183	SOX2.p2	NM_203463|LASS6|253782|LAG1 homolog, ceramide synthase 6	BC109284|LASS6|253782|LAG1 homolog, ceramide synthase 6	BC109285|LASS6|253782|LAG1 homolog, ceramide synthase 6
hg18_v1_chr10_-_118755077_118755128	0.0141782	SOX2.p2	NM_001127211|KIAA1598|57698|KIAA1598	NM_018330|KIAA1598|57698|KIAA1598	AK091381|KIAA1598|57698|KIAA1598
hg18_v1_chr1_-_245561753_245561836	0.0141737	SOX2.p2	CR610381|ZNF496|84838|zinc finger protein 496
hg18_v1_chr11_-_2970126_2970136	0.0141507	SOX2.p2	AK316324|NAP1L4|4676|nucleosome assembly protein 1-like 4
hg18_v1_chr6_+_31838751_31838786	0.0141388	SOX2.p2	NM_001039651|C6orf26|401251|chromosome 6 open reading frame 26	BC137541|C6orf26|401251|chromosome 6 open reading frame 26	BC137542|C6orf26|401251|chromosome 6 open reading frame 26
hg18_v1_chr8_+_143542378_143542378	0.0141256	SOX2.p2	AB005297|BAI1|575|brain-specific angiogenesis inhibitor 1	NM_001702|BAI1|575|brain-specific angiogenesis inhibitor 1
hg18_v1_chr8_-_133561933_133562006	0.0141182	SOX2.p2	BC128576|KCNQ3|3786|potassium voltage-gated channel, KQT-like subfamily, member 3
hg18_v1_chr1_-_224563820_224563820	0.0140765	SOX2.p2	BC045625|LIN9|286826|lin-9 homolog (C. elegans)	NM_173083|LIN9|286826|lin-9 homolog (C. elegans)
hg18_v1_chr1_+_63605912_63605925	0.0140332	SOX2.p2	AK022700|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)	BC001253|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)	AF102851|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)
hg18_v1_chr4_-_44348414_44348414	0.0140169	SOX2.p2	AK096895|YIPF7|285525|Yip1 domain family, member 7	BC103995|YIPF7|285525|Yip1 domain family, member 7	BC103996|YIPF7|285525|Yip1 domain family, member 7	NM_182592|YIPF7|285525|Yip1 domain family, member 7
hg18_v1_chr1_-_101132925_101132991	0.0140026	SOX2.p2	AK312895|EXTL2|2135|exostoses (multiple)-like 2	AB009284|EXTL2|2135|exostoses (multiple)-like 2	AF000416|EXTL2|2135|exostoses (multiple)-like 2	AK096914|EXTL2|2135|exostoses (multiple)-like 2	BC036015|EXTL2|2135|exostoses (multiple)-like 2	AK298124|EXTL2|2135|exostoses (multiple)-like 2
hg18_v1_chr6_-_31938530_31938571	0.0140025	SOX2.p2	BT007206|NEU1|4758|sialidase 1 (lysosomal sialidase)	CR456717|NEU1|4758|sialidase 1 (lysosomal sialidase)	CR541916|NEU1|4758|sialidase 1 (lysosomal sialidase)	DQ890716|NEU1|4758|sialidase 1 (lysosomal sialidase)	DQ892186|NEU1|4758|sialidase 1 (lysosomal sialidase)	DQ893896|NEU1|4758|sialidase 1 (lysosomal sialidase)	DQ895380|NEU1|4758|sialidase 1 (lysosomal sialidase)	AB209011|NEU1|4758|sialidase 1 (lysosomal sialidase)	CR615934|NEU1|4758|sialidase 1 (lysosomal sialidase)	CR598233|NEU1|4758|sialidase 1 (lysosomal sialidase)	BC011900|NEU1|4758|sialidase 1 (lysosomal sialidase)	CR597671|NEU1|4758|sialidase 1 (lysosomal sialidase)	CR599956|NEU1|4758|sialidase 1 (lysosomal sialidase)	CR607381|NEU1|4758|sialidase 1 (lysosomal sialidase)	CR610236|NEU1|4758|sialidase 1 (lysosomal sialidase)	CR613270|NEU1|4758|sialidase 1 (lysosomal sialidase)	CR626617|NEU1|4758|sialidase 1 (lysosomal sialidase)	CR610204|NEU1|4758|sialidase 1 (lysosomal sialidase)	CR617168|NEU1|4758|sialidase 1 (lysosomal sialidase)	CR621134|NEU1|4758|sialidase 1 (lysosomal sialidase)	CR616447|NEU1|4758|sialidase 1 (lysosomal sialidase)	CR604418|NEU1|4758|sialidase 1 (lysosomal sialidase)	U84246|NEU1|4758|sialidase 1 (lysosomal sialidase)
hg18_v1_chr15_+_48434397_48434507	0.0139782	SOX2.p2	BC014238|LOC100129387|100129387|hypothetical LOC100129387	BC004103|LOC100129387|100129387|hypothetical LOC100129387
hg18_v1_chr4_+_52403922_52404165	0.0139649	SOX2.p2	AK124346|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	NM_001040402|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	NM_015115|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	BC053897|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	AK294896|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	BX537944|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	AK027051|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	D87466|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	BC041702|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	AM392554|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	AM392637|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	AM392729|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	AM393240|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)
hg18_v1_chr11_-_75769514_75769799	0.0139518	SOX2.p2	AF007393|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)	AF081567|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)	NM_004705|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)	AK291843|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)	BC117138|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)	BC117140|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)	BC110304|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)
hg18_v1_chr7_+_97679501_97679554	0.0139369	SOX2.p2	BC113394|BHLHA15|168620|basic helix-loop-helix family, member a15	BC113396|BHLHA15|168620|basic helix-loop-helix family, member a15	NM_177455|BHLHA15|168620|basic helix-loop-helix family, member a15
hg18_v1_chr12_+_47009029_47009081	0.0139174	SOX2.p2	AY302593|H1FNT|341567|H1 histone family, member N, testis-specific	NM_181788|H1FNT|341567|H1 histone family, member N, testis-specific	BC119787|H1FNT|341567|H1 histone family, member N, testis-specific	BC118635|H1FNT|341567|H1 histone family, member N, testis-specific
hg18_v1_chr7_+_2565137_2565170	0.0138447	SOX2.p2	BC071858|IQCE|23288|IQ motif containing E	NM_001100390|IQCE|23288|IQ motif containing E	NM_152558|IQCE|23288|IQ motif containing E
hg18_v1_chr11_+_64646378_64646396	0.013785	SOX2.p2	CR598452|MRPL49|740|mitochondrial ribosomal protein L49	U39400|MRPL49|740|mitochondrial ribosomal protein L49	BC004378|MRPL49|740|mitochondrial ribosomal protein L49	AB062395|MRPL49|740|mitochondrial ribosomal protein L49	CR593043|MRPL49|740|mitochondrial ribosomal protein L49
hg18_v1_chr7_-_99536214_99536321	0.0137775	SOX2.p2	AK055379|MCM7|4176|minichromosome maintenance complex component 7	NM_182776|MCM7|4176|minichromosome maintenance complex component 7
hg18_v1_chr9_+_114376709_114376794	0.0137215	SOX2.p2	AK056181|KIAA1958|158405|KIAA1958
hg18_v1_chr1_+_199108705_199108788	0.013681	SOX2.p2	BC126386|GPR25|2848|G protein-coupled receptor 25	BC126388|GPR25|2848|G protein-coupled receptor 25	AK315339|GPR25|2848|G protein-coupled receptor 25	NM_005298|GPR25|2848|G protein-coupled receptor 25
hg18_v1_chr19_+_45948911_45949152	0.013655	SOX2.p2	CR612581|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	CR604415|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	CR617901|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	CR614107|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	CR595370|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	CR613649|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	CR591403|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	CR593045|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	AK293140|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	CR597345|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	CR620634|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	AK313182|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	X06347|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	BC008290|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	CR611939|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	CR609533|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	CR622302|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A
hg18_v1_chr14_-_72995032_72995056	0.0136382	SOX2.p2	BC068476|NUMB|8650|numb homolog (Drosophila)	NM_001005743|NUMB|8650|numb homolog (Drosophila)	NM_001005744|NUMB|8650|numb homolog (Drosophila)	NM_001005745|NUMB|8650|numb homolog (Drosophila)	NM_003744|NUMB|8650|numb homolog (Drosophila)
hg18_v1_chr9_-_3213007_3213066	0.0135459	SOX2.p2	
hg18_v1_chr2_+_231629806_231629836	0.013529	SOX2.p2	NM_001191037|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	NM_002807|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	AK307415|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC094720|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1
hg18_v1_chr4_-_113656762_113656786	0.0134694	SOX2.p2	CR615296|NEUROG2|63973|neurogenin 2	BC036847|NEUROG2|63973|neurogenin 2	NM_024019|NEUROG2|63973|neurogenin 2
hg18_v1_chr1_-_159369041_159369061	0.0134686	SOX2.p2	CR619646|DEDD|9191|death effector domain containing
hg18_v1_chr2_+_148318770_148318841	0.0134674	SOX2.p2	AK314124|ACVR2A|92|activin A receptor, type IIA
hg18_v1_chr7_-_8268206_8268277	0.0134351	SOX2.p2	NM_022307|ICA1|3382|islet cell autoantigen 1, 69kDa	U26591|ICA1|3382|islet cell autoantigen 1, 69kDa
hg18_v1_chr11_-_33714448_33714600	0.0134135	SOX2.p2	CR608995|CD59|966|CD59 molecule, complement regulatory protein	CR590164|CD59|966|CD59 molecule, complement regulatory protein	CR612934|CD59|966|CD59 molecule, complement regulatory protein	CR596803|CD59|966|CD59 molecule, complement regulatory protein	CR603102|CD59|966|CD59 molecule, complement regulatory protein	CR604104|CD59|966|CD59 molecule, complement regulatory protein	CR615105|CD59|966|CD59 molecule, complement regulatory protein	CR619669|CD59|966|CD59 molecule, complement regulatory protein	CR625449|CD59|966|CD59 molecule, complement regulatory protein	CR625964|CD59|966|CD59 molecule, complement regulatory protein	AK311778|CD59|966|CD59 molecule, complement regulatory protein	X16447|CD59|966|CD59 molecule, complement regulatory protein	CR608941|CD59|966|CD59 molecule, complement regulatory protein	CR613325|CD59|966|CD59 molecule, complement regulatory protein	X17198|CD59|966|CD59 molecule, complement regulatory protein	CR610476|CD59|966|CD59 molecule, complement regulatory protein	CR616585|CD59|966|CD59 molecule, complement regulatory protein	NM_000611|CD59|966|CD59 molecule, complement regulatory protein	NM_203329|CD59|966|CD59 molecule, complement regulatory protein	NM_203330|CD59|966|CD59 molecule, complement regulatory protein	NM_203331|CD59|966|CD59 molecule, complement regulatory protein
hg18_v1_chr7_-_129632452_129632573	0.0134119	SOX2.p2	AK027678|TMEM209|84928|transmembrane protein 209	BC057784|TMEM209|84928|transmembrane protein 209	AK027709|TMEM209|84928|transmembrane protein 209	BC045618|TMEM209|84928|transmembrane protein 209	AK074732|TMEM209|84928|transmembrane protein 209	NM_032842|TMEM209|84928|transmembrane protein 209
hg18_v1_chr9_-_4731049_4731068	0.0133379	SOX2.p2	AF086913|AK3|50808|adenylate kinase 3	AF100785|AK3|50808|adenylate kinase 3
hg18_v1_chr15_-_48434896_48434896	0.0133295	SOX2.p2	NM_002041|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	NM_005254|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	NM_016654|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	NM_016655|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	NM_181427|GABPB1|2553|GA binding protein transcription factor, beta subunit 1
hg18_v1_chr4_+_113778060_113778174	0.013324	SOX2.p2	NM_015454|LARP7|51574|La ribonucleoprotein domain family, member 7
hg18_v1_chrX_+_106030049_106030049	0.0133234	SOX2.p2	AF177340|CLDN2|9075|claudin 2	NM_001171092|CLDN2|9075|claudin 2
hg18_v1_chr14_+_19458580_19458605	0.013296	SOX2.p2	BC140947|OR4K5|79317|olfactory receptor, family 4, subfamily K, member 5	NM_001005483|OR4K5|79317|olfactory receptor, family 4, subfamily K, member 5
hg18_v1_chr2_+_181553613_181553650	0.0132959	SOX2.p2	BC092407|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)	CR616134|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)
hg18_v1_chr16_+_1668284_1668290	0.0132749	SOX2.p2	BC060853|HN1L|90861|hematological and neurological expressed 1-like
hg18_v1_chr15_-_38118608_38118680	0.0132503	SOX2.p2	AB451391|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	CR620250|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	X73459|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	BC071716|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	U07857|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	BC100031|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	CR610442|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	CR596116|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	BC035495|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	CR610388|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	BC051006|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	CR614758|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	AB061546|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	NM_003134|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)
hg18_v1_chr16_+_1246273_1246282	0.0132177	SOX2.p2	NM_012217|TPSD1|23430|tryptase delta 1	BC069143|TPSD1|23430|tryptase delta 1
hg18_v1_chr3_-_113842350_113842363	0.0132051	SOX2.p2	AK292881|CCDC80|151887|coiled-coil domain containing 80
hg18_v1_chr6_+_149109841_149109963	0.0131383	SOX2.p2	NM_005715|UST|10090|uronyl-2-sulfotransferase
hg18_v1_chr10_-_21847126_21847194	0.013122	SOX2.p2	
hg18_v1_chrX_+_77052879_77052918	0.0131063	SOX2.p2	AB117973|ATP7A|538|ATPase, Cu++ transporting, alpha polypeptide	AB208828|ATP7A|538|ATPase, Cu++ transporting, alpha polypeptide
hg18_v1_chr15_+_64481270_64481273	0.013073	SOX2.p2	AK294322|MAP2K1|5604|mitogen-activated protein kinase kinase 1
hg18_v1_chr11_-_64646157_64646247	0.0130251	SOX2.p2	BC051834|FAU|2197|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed	BC033877|FAU|2197|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed	D28403|FAU|2197|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed	X65923|FAU|2197|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed	AK026639|FAU|2197|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed	NM_001997|FAU|2197|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed
hg18_v1_chr12_-_10953427_10953427	0.0130043	SOX2.p2	BC095518|TAS2R13|50838|taste receptor, type 2, member 13	NM_023920|TAS2R13|50838|taste receptor, type 2, member 13
hg18_v1_chr19_-_55706156_55706288	0.0129932	SOX2.p2	AF247787|JOSD2|126119|Josephin domain containing 2	NM_138334|JOSD2|126119|Josephin domain containing 2	BC051380|JOSD2|126119|Josephin domain containing 2	BC062416|JOSD2|126119|Josephin domain containing 2	AK131052|JOSD2|126119|Josephin domain containing 2
hg18_v1_chr20_-_1396336_1396416	0.0129923	SOX2.p2	AK093845|NSFL1C|55968|NSFL1 (p97) cofactor (p47)	NM_016143|NSFL1C|55968|NSFL1 (p97) cofactor (p47)	NM_018839|NSFL1C|55968|NSFL1 (p97) cofactor (p47)	NM_182483|NSFL1C|55968|NSFL1 (p97) cofactor (p47)
hg18_v1_chr14_+_64041257_64041295	0.0129271	SOX2.p2	AK291743|ZBTB1|22890|zinc finger and BTB domain containing 1
hg18_v1_chr21_-_39607288_39607396	0.0129124	SOX2.p2	BC140079|BRWD1|54014|bromodomain and WD repeat domain containing 1	AJ292465|BRWD1|54014|bromodomain and WD repeat domain containing 1	AJ292466|BRWD1|54014|bromodomain and WD repeat domain containing 1	AB080586|BRWD1|54014|bromodomain and WD repeat domain containing 1	AB080587|BRWD1|54014|bromodomain and WD repeat domain containing 1	AJ238214|BRWD1|54014|bromodomain and WD repeat domain containing 1
hg18_v1_chr2_-_27187467_27187473	0.0129043	SOX2.p2	AK302185|CGREF1|10669|cell growth regulator with EF-hand domain 1	NM_001166241|CGREF1|10669|cell growth regulator with EF-hand domain 1
hg18_v1_chr13_+_47775887_47775887	0.0128894	SOX2.p2	AK299179|RB1|5925|retinoblastoma 1	AK307730|RB1|5925|retinoblastoma 1
hg18_v1_chr17_+_25730107_25730124	0.0128829	SOX2.p2	NM_001304|CPD|1362|carboxypeptidase D	U65090|CPD|1362|carboxypeptidase D
hg18_v1_chr9_+_131637472_131637538	0.0128431	SOX2.p2	NM_001110303|USP20|10868|ubiquitin specific peptidase 20	NM_006676|USP20|10868|ubiquitin specific peptidase 20
hg18_v1_chr9_+_101717278_101717284	0.0128113	SOX2.p2	BC101564|STX17|55014|syntaxin 17	BC101566|STX17|55014|syntaxin 17	BC143430|STX17|55014|syntaxin 17
hg18_v1_chr13_+_47775888_47775897	0.0127836	SOX2.p2	BC040540|RB1|5925|retinoblastoma 1	BC039060|RB1|5925|retinoblastoma 1
hg18_v1_chrX_+_79562601_79562635	0.0127681	SOX2.p2	BX537938|FAM46D|169966|family with sequence similarity 46, member D	NM_152630|FAM46D|169966|family with sequence similarity 46, member D	BC030784|FAM46D|169966|family with sequence similarity 46, member D	AK313875|FAM46D|169966|family with sequence similarity 46, member D	BC028710|FAM46D|169966|family with sequence similarity 46, member D	BC034979|FAM46D|169966|family with sequence similarity 46, member D
hg18_v1_chr17_-_30724732_30724832	0.0127585	SOX2.p2	AL831964|SLFN11|91607|schlafen family member 11	BC052586|SLFN11|91607|schlafen family member 11	AK092241|SLFN11|91607|schlafen family member 11	NM_001104587|SLFN11|91607|schlafen family member 11	NM_001104588|SLFN11|91607|schlafen family member 11	NM_001104589|SLFN11|91607|schlafen family member 11	NM_001104590|SLFN11|91607|schlafen family member 11	NM_152270|SLFN11|91607|schlafen family member 11
hg18_v1_chr22_+_42908612_42908689	0.0127439	SOX2.p2	CR619524|PARVG|64098|parvin, gamma
hg18_v1_chr8_-_17986584_17986632	0.0127328	SOX2.p2	AY305384|ASAH1|427|N-acylsphingosine amidohydrolase (acid ceramidase) 1
hg18_v1_chr3_-_187138500_187138518	0.0127154	SOX2.p2	AK098191|TRA2B|6434|transformer 2 beta homolog (Drosophila)
hg18_v1_chr10_+_129237602_129237602	0.0126843	SOX2.p2	NM_001030013|NPS|594857|neuropeptide S
hg18_v1_chr19_+_10625896_10625985	0.0126769	SOX2.p2	NM_001137673|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	NM_004516|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	NM_012218|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	NM_017620|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	NM_153464|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	AB209062|ILF3|3609|interleukin enhancer binding factor 3, 90kDa
hg18_v1_chr18_-_21184824_21185468	0.0126576	SOX2.p2	
hg18_v1_chr8_+_126079900_126079928	0.0126255	SOX2.p2	NM_003129|SQLE|6713|squalene epoxidase	AK301792|SQLE|6713|squalene epoxidase	BX647605|SQLE|6713|squalene epoxidase
hg18_v1_chr11_-_118167073_118167106	0.0126225	SOX2.p2	Z11685|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
hg18_v1_chr17_+_7427688_7427688	0.0126196	SOX2.p2	NM_004870|MPDU1|9526|mannose-P-dolichol utilization defect 1
hg18_v1_chr12_-_78831821_78831821	0.012607	SOX2.p2	AK302692|PPP1R12A|4659|protein phosphatase 1, regulatory (inhibitor) subunit 12A	NM_001143886|PPP1R12A|4659|protein phosphatase 1, regulatory (inhibitor) subunit 12A
hg18_v1_chr17_+_34574844_34574863	0.0125543	SOX2.p2	AK093715|LOC284108|284108|hypothetical protein LOC284108
hg18_v1_chr8_-_33576907_33577026	0.0125524	SOX2.p2	CR591909|DUSP26|78986|dual specificity phosphatase 26 (putative)	CR621684|DUSP26|78986|dual specificity phosphatase 26 (putative)	CR604644|DUSP26|78986|dual specificity phosphatase 26 (putative)	AB237597|DUSP26|78986|dual specificity phosphatase 26 (putative)	AB103376|DUSP26|78986|dual specificity phosphatase 26 (putative)	AY902194|DUSP26|78986|dual specificity phosphatase 26 (putative)	BC001613|DUSP26|78986|dual specificity phosphatase 26 (putative)	NM_024025|DUSP26|78986|dual specificity phosphatase 26 (putative)	CR609273|DUSP26|78986|dual specificity phosphatase 26 (putative)	CR616533|DUSP26|78986|dual specificity phosphatase 26 (putative)
hg18_v1_chr13_+_32488477_32488570	0.0125079	SOX2.p2	AB005142|KL|9365|klotho	NM_004795|KL|9365|klotho
hg18_v1_chr10_-_25052549_25052675	0.012494	SOX2.p2	AF480466|ARHGAP21|57584|Rho GTPase activating protein 21	NM_020824|ARHGAP21|57584|Rho GTPase activating protein 21
hg18_v1_chr22_-_43784444_43784472	0.0124794	SOX2.p2	AK092243|PHF21B|112885|PHD finger protein 21B	NM_001135862|PHF21B|112885|PHD finger protein 21B
hg18_v1_chr8_-_93184629_93184633	0.0124497	SOX2.p2	NM_001198633|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_175634|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg18_v1_chr9_+_70840298_70840298	0.0123942	SOX2.p2	NM_000144|FXN|2395|frataxin	NM_001161706|FXN|2395|frataxin	NM_181425|FXN|2395|frataxin
hg18_v1_chr9_+_114288899_114289068	0.012368	SOX2.p2	AK096613|KIAA1958|158405|KIAA1958	NM_133465|KIAA1958|158405|KIAA1958
hg18_v1_chr19_+_10574055_10574212	0.0123315	SOX2.p2	NM_001145056|SLC44A2|57153|solute carrier family 44, member 2	AK309801|SLC44A2|57153|solute carrier family 44, member 2	AK027519|SLC44A2|57153|solute carrier family 44, member 2
hg18_v1_chr17_-_23950171_23950198	0.0123096	SOX2.p2	AK292398|SPAG5|10615|sperm associated antigen 5	NM_006461|SPAG5|10615|sperm associated antigen 5
hg18_v1_chrX_+_41078787_41078831	0.0123076	SOX2.p2	AK304661|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AK127902|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked
hg18_v1_chr1_+_224317030_224317035	0.012297	SOX2.p2	AK311905|H3F3A|3020|H3 histone, family 3A
hg18_v1_chr14_-_68689284_68689573	0.0122619	SOX2.p2	BC022967|DCAF5|8816|DDB1 and CUL4 associated factor 5	BX648006|DCAF5|8816|DDB1 and CUL4 associated factor 5	AB058727|DCAF5|8816|DDB1 and CUL4 associated factor 5
hg18_v1_chr14_-_73250094_73250935	0.0122504	SOX2.p2	CR457112|PNMA1|9240|paraneoplastic antigen MA1	BC039577|PNMA1|9240|paraneoplastic antigen MA1	AK290980|PNMA1|9240|paraneoplastic antigen MA1	AF320308|PNMA1|9240|paraneoplastic antigen MA1	BC007712|PNMA1|9240|paraneoplastic antigen MA1	NM_006029|PNMA1|9240|paraneoplastic antigen MA1
hg18_v1_chr3_-_161584137_161584247	0.0122075	SOX2.p2	AB037795|IFT80|57560|intraflagellar transport 80 homolog (Chlamydomonas)	NM_001190242|IFT80|57560|intraflagellar transport 80 homolog (Chlamydomonas)
hg18_v1_chr5_-_150517454_150517495	0.0121881	SOX2.p2	J03578|ANXA6|309|annexin A6	BC017046|ANXA6|309|annexin A6
hg18_v1_chr17_-_7106497_7106523	0.0120914	SOX2.p2	CR611223|CLDN7|1366|claudin 7	CR594337|CLDN7|1366|claudin 7	BC001055|CLDN7|1366|claudin 7	AK313958|CLDN7|1366|claudin 7	CR607084|CLDN7|1366|claudin 7
hg18_v1_chr15_-_40628202_40628283	0.0120629	SOX2.p2	BX538324|LRRC57|255252|leucine rich repeat containing 57	BC051262|LRRC57|255252|leucine rich repeat containing 57	BC058935|LRRC57|255252|leucine rich repeat containing 57	AK094131|LRRC57|255252|leucine rich repeat containing 57	CR749223|LRRC57|255252|leucine rich repeat containing 57	AK309861|LRRC57|255252|leucine rich repeat containing 57
hg18_v1_chr1_-_247086686_247086776	0.0120507	SOX2.p2	AY358453|SH3BP5L|80851|SH3-binding domain protein 5-like	CR613756|SH3BP5L|80851|SH3-binding domain protein 5-like	AK056382|SH3BP5L|80851|SH3-binding domain protein 5-like	NM_030645|SH3BP5L|80851|SH3-binding domain protein 5-like
hg18_v1_chr5_+_137701122_137701185	0.0120356	SOX2.p2	NM_001135647|FAM53C|51307|family with sequence similarity 53, member C	BC052993|FAM53C|51307|family with sequence similarity 53, member C
hg18_v1_chr19_+_977608_977612	0.0120311	SOX2.p2	AK126391|CNN2|1265|calponin 2
hg18_v1_chr6_+_42639745_42639765	0.011996	SOX2.p2	BC024217|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2	BC064512|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2
hg18_v1_chr15_+_83724743_83725047	0.0119947	SOX2.p2	AK125331|AKAP13|11214|A kinase (PRKA) anchor protein 13	BC050312|AKAP13|11214|A kinase (PRKA) anchor protein 13	NM_006738|AKAP13|11214|A kinase (PRKA) anchor protein 13	NM_007200|AKAP13|11214|A kinase (PRKA) anchor protein 13	AF406992|AKAP13|11214|A kinase (PRKA) anchor protein 13
hg18_v1_chrX_+_150614385_150614385	0.0119181	SOX2.p2	NM_024082|PRRG3|79057|proline rich Gla (G-carboxyglutamic acid) 3 (transmembrane)
hg18_v1_chr5_+_134237808_134238094	0.0119119	SOX2.p2	BC001615|TXNDC15|79770|thioredoxin domain containing 15	AK026278|TXNDC15|79770|thioredoxin domain containing 15	AK225454|TXNDC15|79770|thioredoxin domain containing 15	AK225462|TXNDC15|79770|thioredoxin domain containing 15	CR616649|TXNDC15|79770|thioredoxin domain containing 15	BC032568|TXNDC15|79770|thioredoxin domain containing 15	AK307529|TXNDC15|79770|thioredoxin domain containing 15	CR613338|TXNDC15|79770|thioredoxin domain containing 15	CR613370|TXNDC15|79770|thioredoxin domain containing 15	BX538131|TXNDC15|79770|thioredoxin domain containing 15	CR601239|TXNDC15|79770|thioredoxin domain containing 15	EU832512|TXNDC15|79770|thioredoxin domain containing 15	EU832593|TXNDC15|79770|thioredoxin domain containing 15
hg18_v1_chr5_-_137116746_137116859	0.011895	SOX2.p2	CR625349|HNRNPA0|10949|heterogeneous nuclear ribonucleoprotein A0	CR622742|HNRNPA0|10949|heterogeneous nuclear ribonucleoprotein A0	BC012490|HNRNPA0|10949|heterogeneous nuclear ribonucleoprotein A0
hg18_v1_chr18_+_75354312_75354424	0.0118847	SOX2.p2	BC045628|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1
hg18_v1_chr4_+_77214886_77214900	0.0118843	SOX2.p2	AY543660|ART3|419|ADP-ribosyltransferase 3	BC008397|ART3|419|ADP-ribosyltransferase 3	BC017913|ART3|419|ADP-ribosyltransferase 3	NM_001130016|ART3|419|ADP-ribosyltransferase 3	NM_001179|ART3|419|ADP-ribosyltransferase 3	AK295305|ART3|419|ADP-ribosyltransferase 3	AK308810|ART3|419|ADP-ribosyltransferase 3	AY543655|ART3|419|ADP-ribosyltransferase 3
hg18_v1_chrX_+_101356905_101356935	0.011881	SOX2.p2	AK303069|NXF2B|728343|nuclear RNA export factor 2B	AK057385|NXF2|56001|nuclear RNA export factor 2	AK093310|NXF2|56001|nuclear RNA export factor 2	BX647232|NXF2|56001|nuclear RNA export factor 2	NM_001099686|NXF2B|728343|nuclear RNA export factor 2B	NM_017809|NXF2|56001|nuclear RNA export factor 2
hg18_v1_chr19_+_45774569_45774610	0.0118767	SOX2.p2	NM_138392|SHKBP1|92799|SH3KBP1 binding protein 1	AF258553|SHKBP1|92799|SH3KBP1 binding protein 1	AK075057|SHKBP1|92799|SH3KBP1 binding protein 1	AK300819|SHKBP1|92799|SH3KBP1 binding protein 1
hg18_v1_chr15_-_32422598_32422656	0.0118683	SOX2.p2	BC008886|NOP10|55505|NOP10 ribonucleoprotein homolog (yeast)	CR612859|NOP10|55505|NOP10 ribonucleoprotein homolog (yeast)	BC063023|NOP10|55505|NOP10 ribonucleoprotein homolog (yeast)	AB043104|NOP10|55505|NOP10 ribonucleoprotein homolog (yeast)	NM_018648|NOP10|55505|NOP10 ribonucleoprotein homolog (yeast)
hg18_v1_chr10_+_44775155_44775321	0.011865	SOX2.p2	AY216713|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4	AY216714|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4	AY216715|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4	AY216716|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4	NM_032023|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4	BC032593|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4	AF260335|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4	AK311531|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4
hg18_v1_chr15_-_89276657_89276824	0.0118623	SOX2.p2	CR625970|HDDC3|374659|HD domain containing 3	NM_198527|HDDC3|374659|HD domain containing 3	BC033794|HDDC3|374659|HD domain containing 3	AK057584|HDDC3|374659|HD domain containing 3
hg18_v1_chr11_+_113776504_113776578	0.0118518	SOX2.p2	AK312619|RBM7|10179|RNA binding motif protein 7	AK002015|RBM7|10179|RNA binding motif protein 7	AB209753|RBM7|10179|RNA binding motif protein 7	AK225667|RBM7|10179|RNA binding motif protein 7
hg18_v1_chr6_-_11340887_11340906	0.011832	SOX2.p2	NM_006403|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9	NM_182966|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9
hg18_v1_chr11_-_84312085_84312112	0.0118313	SOX2.p2	U32376|DLG2|1740|discs, large homolog 2 (Drosophila)	AB209252|DLG2|1740|discs, large homolog 2 (Drosophila)	AK295094|DLG2|1740|discs, large homolog 2 (Drosophila)	NM_001364|DLG2|1740|discs, large homolog 2 (Drosophila)
hg18_v1_chr19_+_45774626_45774631	0.0118294	SOX2.p2	BC022855|SHKBP1|92799|SH3KBP1 binding protein 1
hg18_v1_chr9_-_131637321_131637359	0.0117907	SOX2.p2	AF218421|C9orf78|51759|chromosome 9 open reading frame 78	BC007664|C9orf78|51759|chromosome 9 open reading frame 78	BC017570|C9orf78|51759|chromosome 9 open reading frame 78
hg18_v1_chr9_+_138810610_138810635	0.0117779	SOX2.p2	NM_001039374|KIAA1984|84960|KIAA1984	BC064582|KIAA1984|84960|KIAA1984	BC137317|KIAA1984|84960|KIAA1984	BC137318|KIAA1984|84960|KIAA1984
hg18_v1_chr8_+_146248634_146248775	0.0117603	SOX2.p2	BX648996|C8orf33|65265|chromosome 8 open reading frame 33	BC010001|C8orf33|65265|chromosome 8 open reading frame 33	CR457330|C8orf33|65265|chromosome 8 open reading frame 33
hg18_v1_chr6_+_43257883_43257902	0.0117489	SOX2.p2	AK125228|CUL9|23113|cullin 9	CR749511|CUL9|23113|cullin 9	NM_015089|CUL9|23113|cullin 9	CR749841|CUL9|23113|cullin 9
hg18_v1_chr4_-_157006827_157006874	0.0117151	SOX2.p2	AJ252011|ACCN5|51802|amiloride-sensitive cation channel 5, intestinal	NM_017419|ACCN5|51802|amiloride-sensitive cation channel 5, intestinal
hg18_v1_chr13_+_51484517_51484561	0.01171	SOX2.p2	NM_001004127|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	BC142998|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	AK296747|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	BC108677|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	BC111022|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	AK025456|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	BC143059|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	BC150316|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	CR602797|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)
hg18_v1_chrX_+_85404626_85404626	0.0117095	SOX2.p2	AK055953|DACH2|117154|dachshund homolog 2 (Drosophila)	AK298787|DACH2|117154|dachshund homolog 2 (Drosophila)	NM_001139515|DACH2|117154|dachshund homolog 2 (Drosophila)
hg18_v1_chr5_-_150517528_150517635	0.0116556	SOX2.p2	NM_001155|ANXA6|309|annexin A6
hg18_v1_chr17_-_4216563_4216751	0.0116275	SOX2.p2	AK313059|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, yeast)	BC002775|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, yeast)	CR623407|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, yeast)	NM_003342|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, yeast)
hg18_v1_chr19_-_12853249_12853334	0.0116114	SOX2.p2	AK075449|DNASE2|1777|deoxyribonuclease II, lysosomal	AF047016|DNASE2|1777|deoxyribonuclease II, lysosomal	AB004574|DNASE2|1777|deoxyribonuclease II, lysosomal	CR605842|DNASE2|1777|deoxyribonuclease II, lysosomal	CR608424|DNASE2|1777|deoxyribonuclease II, lysosomal	AK297493|DNASE2|1777|deoxyribonuclease II, lysosomal	AF045937|DNASE2|1777|deoxyribonuclease II, lysosomal	CR617284|DNASE2|1777|deoxyribonuclease II, lysosomal	AK315358|DNASE2|1777|deoxyribonuclease II, lysosomal	BC065209|DNASE2|1777|deoxyribonuclease II, lysosomal	AF060222|DNASE2|1777|deoxyribonuclease II, lysosomal	AK311145|DNASE2|1777|deoxyribonuclease II, lysosomal	NM_001375|DNASE2|1777|deoxyribonuclease II, lysosomal
hg18_v1_chrX_-_119487183_119487261	0.0115762	SOX2.p2	BC002965|LAMP2|3920|lysosomal-associated membrane protein 2	S79873|LAMP2|3920|lysosomal-associated membrane protein 2	U36336|LAMP2|3920|lysosomal-associated membrane protein 2	X77196|LAMP2|3920|lysosomal-associated membrane protein 2	AK295038|LAMP2|3920|lysosomal-associated membrane protein 2	NM_001122606|LAMP2|3920|lysosomal-associated membrane protein 2	NM_002294|LAMP2|3920|lysosomal-associated membrane protein 2	NM_013995|LAMP2|3920|lysosomal-associated membrane protein 2
hg18_v1_chr11_+_46358909_46359193	0.0115737	SOX2.p2	AK309963|MDK|4192|midkine (neurite growth-promoting factor 2)	AK308210|MDK|4192|midkine (neurite growth-promoting factor 2)	AK130889|MDK|4192|midkine (neurite growth-promoting factor 2)	NM_001012334|MDK|4192|midkine (neurite growth-promoting factor 2)
hg18_v1_chr18_+_37789209_37789254	0.0115467	SOX2.p2	BC033004|PIK3C3|5289|phosphoinositide-3-kinase, class 3	AK298517|PIK3C3|5289|phosphoinositide-3-kinase, class 3	BC010388|PIK3C3|5289|phosphoinositide-3-kinase, class 3	AK308364|PIK3C3|5289|phosphoinositide-3-kinase, class 3	BC053651|PIK3C3|5289|phosphoinositide-3-kinase, class 3	DQ890552|PIK3C3|5289|phosphoinositide-3-kinase, class 3	DQ893712|PIK3C3|5289|phosphoinositide-3-kinase, class 3
hg18_v1_chr8_-_30060029_30060200	0.0115357	SOX2.p2	Z70223|TMEM66|51669|transmembrane protein 66	CR625035|TMEM66|51669|transmembrane protein 66	CR604656|TMEM66|51669|transmembrane protein 66	CR592958|TMEM66|51669|transmembrane protein 66	BC015012|TMEM66|51669|transmembrane protein 66	CR609979|TMEM66|51669|transmembrane protein 66	CR610452|TMEM66|51669|transmembrane protein 66	CR603787|TMEM66|51669|transmembrane protein 66	AF078855|TMEM66|51669|transmembrane protein 66	CR607306|TMEM66|51669|transmembrane protein 66	CR622883|TMEM66|51669|transmembrane protein 66	CR604748|TMEM66|51669|transmembrane protein 66	CR612155|TMEM66|51669|transmembrane protein 66	CR615477|TMEM66|51669|transmembrane protein 66	CR596584|TMEM66|51669|transmembrane protein 66	CR603460|TMEM66|51669|transmembrane protein 66	CR622782|TMEM66|51669|transmembrane protein 66	CR616524|TMEM66|51669|transmembrane protein 66	CR592722|TMEM66|51669|transmembrane protein 66	AB028926|TMEM66|51669|transmembrane protein 66	CR613232|TMEM66|51669|transmembrane protein 66	AK295360|TMEM66|51669|transmembrane protein 66	AK075340|TMEM66|51669|transmembrane protein 66	CR605556|TMEM66|51669|transmembrane protein 66	CR609363|TMEM66|51669|transmembrane protein 66	CR613264|TMEM66|51669|transmembrane protein 66	CR622956|TMEM66|51669|transmembrane protein 66	AK314659|TMEM66|51669|transmembrane protein 66	CR608346|TMEM66|51669|transmembrane protein 66	AK025927|TMEM66|51669|transmembrane protein 66	AY359104|TMEM66|51669|transmembrane protein 66	NM_016127|TMEM66|51669|transmembrane protein 66	AK094386|TMEM66|51669|transmembrane protein 66
hg18_v1_chr17_+_1566566_1566644	0.0115345	SOX2.p2	AK298567|WDR81|124997|WD repeat domain 81	NM_001163673|WDR81|124997|WD repeat domain 81	NM_152348|WDR81|124997|WD repeat domain 81	AK091136|WDR81|124997|WD repeat domain 81	BC114519|WDR81|124997|WD repeat domain 81	BC114568|WDR81|124997|WD repeat domain 81
hg18_v1_chr15_+_66133625_66133708	0.011533	SOX2.p2	AF167160|PIAS1|8554|protein inhibitor of activated STAT, 1	NM_016166|PIAS1|8554|protein inhibitor of activated STAT, 1	BC118587|PIAS1|8554|protein inhibitor of activated STAT, 1	BC121797|PIAS1|8554|protein inhibitor of activated STAT, 1	AK314515|PIAS1|8554|protein inhibitor of activated STAT, 1	BC104646|PIAS1|8554|protein inhibitor of activated STAT, 1
hg18_v1_chr6_+_154373323_154373328	0.0115188	SOX2.p2	DQ680044|OPRM1|4988|opioid receptor, mu 1	EU340241|OPRM1|4988|opioid receptor, mu 1	EU340242|OPRM1|4988|opioid receptor, mu 1	EU340243|OPRM1|4988|opioid receptor, mu 1	NM_001145279|OPRM1|4988|opioid receptor, mu 1	NM_001145280|OPRM1|4988|opioid receptor, mu 1	NM_001145281|OPRM1|4988|opioid receptor, mu 1
hg18_v1_chr7_+_2565172_2565191	0.0115124	SOX2.p2	AK302053|IQCE|23288|IQ motif containing E
hg18_v1_chr5_+_128468785_128468878	0.0115094	SOX2.p2	CR623281|ISOC1|51015|isochorismatase domain containing 1
hg18_v1_chr10_-_61336190_61336224	0.0115084	SOX2.p2	S72869|CCDC6|8030|coiled-coil domain containing 6
hg18_v1_chr3_+_47819402_47819629	0.011505	SOX2.p2	BC047335|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	NM_014966|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	NM_138615|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	BC028405|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	AK291266|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30
hg18_v1_chr3_-_151746970_151747117	0.0114987	SOX2.p2	AK093929|SERP1|27230|stress-associated endoplasmic reticulum protein 1	AF136975|SERP1|27230|stress-associated endoplasmic reticulum protein 1	AK098135|SERP1|27230|stress-associated endoplasmic reticulum protein 1	AK090933|SERP1|27230|stress-associated endoplasmic reticulum protein 1	NM_014445|SERP1|27230|stress-associated endoplasmic reticulum protein 1
hg18_v1_chr12_-_30740072_30740195	0.0114735	SOX2.p2	NM_006390|IPO8|10526|importin 8
hg18_v1_chr4_-_5941043_5941138	0.0114659	SOX2.p2	D78012|CRMP1|1400|collapsin response mediator protein 1	AK127754|CRMP1|1400|collapsin response mediator protein 1	CR608807|CRMP1|1400|collapsin response mediator protein 1	BC000252|CRMP1|1400|collapsin response mediator protein 1	BC007613|CRMP1|1400|collapsin response mediator protein 1	AK309379|CRMP1|1400|collapsin response mediator protein 1
hg18_v1_chr11_+_3786341_3786399	0.0114641	SOX2.p2	NM_014489|PGAP2|27315|post-GPI attachment to proteins 2	AF159615|PGAP2|27315|post-GPI attachment to proteins 2	CR626434|PGAP2|27315|post-GPI attachment to proteins 2
hg18_v1_chr3_-_47180417_47180470	0.0114566	SOX2.p2	AK131371|SETD2|29072|SET domain containing 2	NM_014159|SETD2|29072|SET domain containing 2
hg18_v1_chr7_+_137182230_137182315	0.0114513	SOX2.p2	
hg18_v1_chr5_-_150517499_150517526	0.0114264	SOX2.p2	AK126836|ANXA6|309|annexin A6	AK290672|ANXA6|309|annexin A6	AK130077|ANXA6|309|annexin A6	Y00097|ANXA6|309|annexin A6	CR596318|ANXA6|309|annexin A6	AK298582|ANXA6|309|annexin A6
hg18_v1_chrX_+_69270489_69270550	0.0114253	SOX2.p2	Y08915|IGBP1|3476|immunoglobulin (CD79A) binding protein 1	CR591988|IGBP1|3476|immunoglobulin (CD79A) binding protein 1	CR603491|IGBP1|3476|immunoglobulin (CD79A) binding protein 1	CR613988|IGBP1|3476|immunoglobulin (CD79A) binding protein 1	CR596975|IGBP1|3476|immunoglobulin (CD79A) binding protein 1	BT006736|IGBP1|3476|immunoglobulin (CD79A) binding protein 1	CR456782|IGBP1|3476|immunoglobulin (CD79A) binding protein 1	DQ892322|IGBP1|3476|immunoglobulin (CD79A) binding protein 1	DQ895524|IGBP1|3476|immunoglobulin (CD79A) binding protein 1	CR606253|IGBP1|3476|immunoglobulin (CD79A) binding protein 1	CR597909|IGBP1|3476|immunoglobulin (CD79A) binding protein 1	CR597289|IGBP1|3476|immunoglobulin (CD79A) binding protein 1	CR606503|IGBP1|3476|immunoglobulin (CD79A) binding protein 1	CR593604|IGBP1|3476|immunoglobulin (CD79A) binding protein 1
hg18_v1_chr17_+_72880831_72880866	0.0114014	SOX2.p2	AJ312319|SEPT9|10801|septin 9	NM_001113493|SEPT9|10801|septin 9
hg18_v1_chr8_-_80842452_80842652	0.0113955	SOX2.p2	AF311883|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	BT020065|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AF151522|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AF176422|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AJ272214|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	BC001873|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AK074641|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AK313271|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AF232239|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AK092437|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AK226041|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	CR622924|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AF254637|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	CR598609|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	NM_001040708|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	NM_012258|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1
hg18_v1_chr19_+_40831061_40831068	0.0113822	SOX2.p2	AK312140|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)
hg18_v1_chr1_-_31485320_31485324	0.0113791	SOX2.p2	NM_024522|NKAIN1|79570|Na+/K+ transporting ATPase interacting 1
hg18_v1_chr5_-_133775419_133775488	0.0113686	SOX2.p2	CR604625|CDKN2AIPNL|91368|CDKN2A interacting protein N-terminal like	CR612735|CDKN2AIPNL|91368|CDKN2A interacting protein N-terminal like	CR591520|CDKN2AIPNL|91368|CDKN2A interacting protein N-terminal like	CR602620|CDKN2AIPNL|91368|CDKN2A interacting protein N-terminal like	BC018086|CDKN2AIPNL|91368|CDKN2A interacting protein N-terminal like	BC008293|CDKN2AIPNL|91368|CDKN2A interacting protein N-terminal like
hg18_v1_chr1_+_42920946_42921397	0.0113253	SOX2.p2	BC013838|YBX1|4904|Y box binding protein 1
hg18_v1_chr15_-_48434641_48434653	0.0113171	SOX2.p2	U13045|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	U13046|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	U13047|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	U13048|GABPB1|2553|GA binding protein transcription factor, beta subunit 1
hg18_v1_chr8_+_60194328_60194331	0.0113138	SOX2.p2	
hg18_v1_chr12_+_64869181_64869269	0.0113105	SOX2.p2	BC029493|IRAK3|11213|interleukin-1 receptor-associated kinase 3	NM_001142523|IRAK3|11213|interleukin-1 receptor-associated kinase 3	NM_007199|IRAK3|11213|interleukin-1 receptor-associated kinase 3	BC047399|IRAK3|11213|interleukin-1 receptor-associated kinase 3	AK314040|IRAK3|11213|interleukin-1 receptor-associated kinase 3	BC057800|IRAK3|11213|interleukin-1 receptor-associated kinase 3
hg18_v1_chr17_-_41626032_41626140	0.011308	SOX2.p2	BC098376|KIAA1267|284058|KIAA1267	NM_015443|KIAA1267|284058|KIAA1267
hg18_v1_chr4_+_142361523_142361550	0.0112746	SOX2.p2	AK294089|ZNF330|27309|zinc finger protein 330	AK223609|ZNF330|27309|zinc finger protein 330	AK002106|ZNF330|27309|zinc finger protein 330	AJ006591|ZNF330|27309|zinc finger protein 330
hg18_v1_chr1_+_117404432_117404462	0.011251	SOX2.p2	AK291017|TTF2|8458|transcription termination factor, RNA polymerase II
hg18_v1_chr16_+_8714326_8714347	0.0112286	SOX2.p2	NM_000663|ABAT|18|4-aminobutyrate aminotransferase	BC013965|ABAT|18|4-aminobutyrate aminotransferase
hg18_v1_chr4_-_39655554_39655912	0.0112258	SOX2.p2	AK098331|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)	BC114218|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)
hg18_v1_chr10_+_111959978_111959978	0.0112096	SOX2.p2	BC012907|MXI1|4601|MAX interactor 1	NM_001008541|MXI1|4601|MAX interactor 1
hg18_v1_chr5_+_110455961_110456028	0.0111939	SOX2.p2	CR600030|WDR36|134430|WD repeat domain 36
hg18_v1_chr3_-_63824544_63824848	0.0111778	SOX2.p2	AK027098|THOC7|80145|THO complex 7 homolog (Drosophila)	AF104914|THOC7|80145|THO complex 7 homolog (Drosophila)	NM_025075|THOC7|80145|THO complex 7 homolog (Drosophila)
hg18_v1_chr12_+_49185035_49185298	0.0111561	SOX2.p2	BC075027|DIP2B|57609|DIP2 disco-interacting protein 2 homolog B (Drosophila)
hg18_v1_chr17_+_72880967_72881074	0.0111463	SOX2.p2	AK304143|SEPT9|10801|septin 9
hg18_v1_chr19_+_48792574_48792627	0.0111132	SOX2.p2	NM_001145347|ZNF576|79177|zinc finger protein 576	CR621953|ZNF576|79177|zinc finger protein 576	BC002981|ZNF576|79177|zinc finger protein 576
hg18_v1_chr19_-_60461656_60461717	0.0111082	SOX2.p2	BC094753|PPP6R1|22870|protein phosphatase 6, regulatory subunit 1
hg18_v1_chr16_+_87164342_87164398	0.0110948	SOX2.p2	BC050463|ZC3H18|124245|zinc finger CCCH-type containing 18
hg18_v1_chr11_+_10836339_10836385	0.0110946	SOX2.p2	BC014360|LOC729013|729013|hypothetical LOC729013	BC036635|LOC729013|729013|hypothetical LOC729013
hg18_v1_chr9_-_138454071_138454087	0.0110936	SOX2.p2	BC028032|INPP5E|56623|inositol polyphosphate-5-phosphatase, 72 kDa	NM_019892|INPP5E|56623|inositol polyphosphate-5-phosphatase, 72 kDa
hg18_v1_chr20_+_2792688_2792879	0.0110704	SOX2.p2	BC126431|VPS16|64601|vacuolar protein sorting 16 homolog (S. cerevisiae)	M34668|PTPRA|5786|protein tyrosine phosphatase, receptor type, A	NM_002836|PTPRA|5786|protein tyrosine phosphatase, receptor type, A	BC064406|VPS16|64601|vacuolar protein sorting 16 homolog (S. cerevisiae)
hg18_v1_chr17_+_43480724_43480779	0.0110685	SOX2.p2	X77366|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1
hg18_v1_chr21_+_39739663_39739667	0.0110584	SOX2.p2	NM_001001713|SH3BGR|6450|SH3 domain binding glutamic acid-rich protein
hg18_v1_chr6_-_47385470_47385598	0.0110455	SOX2.p2	BC021572|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21	AY358304|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg18_v1_chr1_-_154988084_154988085	0.0110313	SOX2.p2	CR593023|HDGF|3068|hepatoma-derived growth factor
hg18_v1_chr6_-_111243199_111243215	0.0110234	SOX2.p2	AY028424|CDK19|23097|cyclin-dependent kinase 19
hg18_v1_chr10_+_26545241_26545241	0.011023	SOX2.p2	NM_000818|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)	NM_001134366|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)
hg18_v1_chr15_+_43036194_43036206	0.0110132	SOX2.p2	BC029537|C15orf43|145645|chromosome 15 open reading frame 43	NM_152448|C15orf43|145645|chromosome 15 open reading frame 43	DQ890983|C15orf43|145645|chromosome 15 open reading frame 43	DQ894158|C15orf43|145645|chromosome 15 open reading frame 43
hg18_v1_chr19_-_16544188_16544205	0.0110126	SOX2.p2	BC062562|SLC35E1|79939|solute carrier family 35, member E1	NM_024881|SLC35E1|79939|solute carrier family 35, member E1
hg18_v1_chr9_+_132700567_132700651	0.0110019	SOX2.p2	M14754|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase	NM_005157|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase
hg18_v1_chr14_-_104142125_104142141	0.0109931	SOX2.p2	AK124477|TMEM179|388021|transmembrane protein 179	NM_207379|TMEM179|388021|transmembrane protein 179
hg18_v1_chr20_+_9146036_9146081	0.0109886	SOX2.p2	NM_182797|PLCB4|5332|phospholipase C, beta 4	BC117458|PLCB4|5332|phospholipase C, beta 4	BC143868|PLCB4|5332|phospholipase C, beta 4
hg18_v1_chr4_+_5104140_5104223	0.0109728	SOX2.p2	AK313846|STK32B|55351|serine/threonine kinase 32B	AK292696|STK32B|55351|serine/threonine kinase 32B	BC069203|STK32B|55351|serine/threonine kinase 32B
hg18_v1_chr7_-_120285364_120285428	0.0109724	SOX2.p2	BC031265|TSPAN12|23554|tetraspanin 12	NM_012338|TSPAN12|23554|tetraspanin 12
hg18_v1_chr4_-_83514160_83514195	0.0109634	SOX2.p2	AK300149|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	AK292707|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	AK303552|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	NM_001003810|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	NM_002138|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	NM_031369|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	NM_031370|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)
hg18_v1_chrX_+_136475979_136476011	0.0109528	SOX2.p2	AF028706|ZIC3|7547|Zic family member 3 (odd-paired homolog, Drosophila)	NM_003413|ZIC3|7547|Zic family member 3 (odd-paired homolog, Drosophila)
hg18_v1_chr3_+_151747266_151747286	0.0109405	SOX2.p2	BX647951|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	AL833101|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	BC011885|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	AF497978|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	DQ896788|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	EU176412|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	CR601134|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	AF172818|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa
hg18_v1_chr3_-_158361175_158361242	0.010914	SOX2.p2	NM_020307|CCNL1|57018|cyclin L1	AK122738|CCNL1|57018|cyclin L1
hg18_v1_chr17_-_5312784_5312873	0.0109011	SOX2.p2	BC030017|DHX33|56919|DEAH (Asp-Glu-Ala-His) box polypeptide 33	AK295074|DHX33|56919|DEAH (Asp-Glu-Ala-His) box polypeptide 33
hg18_v1_chr12_-_45052830_45052911	0.0108696	SOX2.p2	NM_018976|SLC38A2|54407|solute carrier family 38, member 2
hg18_v1_chr16_-_1772305_1772567	0.0108637	SOX2.p2	BC041897|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	BC047441|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	BC007588|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	BC035065|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	CR622113|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	CR604082|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	BC024244|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	AK074190|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	CR596537|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	CR595592|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	BC065515|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	CR592259|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	CR605628|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	CR610957|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	CR624932|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	CR591468|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3
hg18_v1_chr19_+_4294523_4294707	0.0108547	SOX2.p2	NM_001159846|MPND|84954|MPN domain containing	NM_032868|MPND|84954|MPN domain containing	AK027887|MPND|84954|MPN domain containing	CR600604|MPND|84954|MPN domain containing	CR605933|MPND|84954|MPN domain containing	AK308468|MPND|84954|MPN domain containing	BC032652|MPND|84954|MPN domain containing	CR613172|MPND|84954|MPN domain containing	CR610197|MPND|84954|MPN domain containing	CR618730|MPND|84954|MPN domain containing
hg18_v1_chr13_+_47775776_47775886	0.0108475	SOX2.p2	AK291258|RB1|5925|retinoblastoma 1	AK300284|RB1|5925|retinoblastoma 1	NM_000321|RB1|5925|retinoblastoma 1
hg18_v1_chr19_+_62836322_62836433	0.0108227	SOX2.p2	NM_006385|ZNF211|10520|zinc finger protein 211	NM_198855|ZNF211|10520|zinc finger protein 211	AK294869|ZNF211|10520|zinc finger protein 211	BC018138|ZNF211|10520|zinc finger protein 211	AK296942|ZNF211|10520|zinc finger protein 211	AK297047|ZNF211|10520|zinc finger protein 211	AK304666|ZNF211|10520|zinc finger protein 211	BC110856|ZNF211|10520|zinc finger protein 211	CR596216|ZNF211|10520|zinc finger protein 211	BC034351|ZNF211|10520|zinc finger protein 211	AK026941|ZNF211|10520|zinc finger protein 211
hg18_v1_chr5_+_170779264_170779271	0.0107712	SOX2.p2	AY358811|FGF18|8817|fibroblast growth factor 18	AF075292|FGF18|8817|fibroblast growth factor 18	NM_003862|FGF18|8817|fibroblast growth factor 18
hg18_v1_chr16_+_30326077_30326235	0.0107493	SOX2.p2	AK313930|ZNF771|51333|zinc finger protein 771	NM_001142305|ZNF771|51333|zinc finger protein 771	NM_016643|ZNF771|51333|zinc finger protein 771
hg18_v1_chr5_+_110455768_110455948	0.0107145	SOX2.p2	AF385437|WDR36|134430|WD repeat domain 36	NM_139281|WDR36|134430|WD repeat domain 36	BC133025|WDR36|134430|WD repeat domain 36	BC136517|WDR36|134430|WD repeat domain 36	AK095312|WDR36|134430|WD repeat domain 36	AL832494|WDR36|134430|WD repeat domain 36
hg18_v1_chr16_-_10696285_10696302	0.010678	SOX2.p2	BC130336|TEKT5|146279|tektin 5	BC130338|TEKT5|146279|tektin 5	AK057433|TEKT5|146279|tektin 5	NM_144674|TEKT5|146279|tektin 5
hg18_v1_chr18_+_54039779_54039788	0.0106694	SOX2.p2	AK300444|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like
hg18_v1_chr18_-_31178379_31178414	0.0106555	SOX2.p2	AF038964|ZNF24|7572|zinc finger protein 24	BC003566|ZNF24|7572|zinc finger protein 24	U68536|ZNF24|7572|zinc finger protein 24	BC016801|ZNF24|7572|zinc finger protein 24
hg18_v1_chr8_+_126079929_126079985	0.0106535	SOX2.p2	BX647400|SQLE|6713|squalene epoxidase
hg18_v1_chr11_-_61491472_61491635	0.0105798	SOX2.p2	DQ891113|FTH1|2495|ferritin, heavy polypeptide 1	DQ894293|FTH1|2495|ferritin, heavy polypeptide 1	AF088851|FTH1|2495|ferritin, heavy polypeptide 1	M12937|FTH1|2495|ferritin, heavy polypeptide 1	BC015156|FTH1|2495|ferritin, heavy polypeptide 1	M11146|FTH1|2495|ferritin, heavy polypeptide 1	X00318|FTH1|2495|ferritin, heavy polypeptide 1	M97164|FTH1|2495|ferritin, heavy polypeptide 1	CR592751|FTH1|2495|ferritin, heavy polypeptide 1	BC016857|FTH1|2495|ferritin, heavy polypeptide 1	BC001399|FTH1|2495|ferritin, heavy polypeptide 1
hg18_v1_chr11_+_89458765_89458765	0.0105782	SOX2.p2	NM_001143975|UBTFL1|642623|upstream binding transcription factor, RNA polymerase I-like 1
hg18_v1_chr6_+_43257903_43257928	0.0105466	SOX2.p2	BC028159|CUL9|23113|cullin 9
hg18_v1_chr16_+_87741416_87741478	0.0105191	SOX2.p2	
hg18_v1_chr17_+_62261696_62261699	0.0105141	SOX2.p2	AK290171|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5
hg18_v1_chr9_+_131637539_131637548	0.0104717	SOX2.p2	BC033669|USP20|10868|ubiquitin specific peptidase 20
hg18_v1_chr1_-_183392776_183392847	0.0104603	SOX2.p2	AK302166|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like
hg18_v1_chr22_-_49363209_49363371	0.0104514	SOX2.p2	BC143071|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)	BC150318|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)	D87812|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)	U62733|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)	BC142954|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)	NM_001145137|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)
hg18_v1_chr17_-_24302450_24302462	0.0104378	SOX2.p2	BC110882|PHF12|57649|PHD finger protein 12
hg18_v1_chr20_-_49592444_49592649	0.0103953	SOX2.p2	EU887573|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887578|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	BC136418|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	BC144074|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2
hg18_v1_chr1_-_154987708_154987898	0.0103728	SOX2.p2	AK292325|HDGF|3068|hepatoma-derived growth factor	DQ893406|HDGF|3068|hepatoma-derived growth factor	DQ896724|HDGF|3068|hepatoma-derived growth factor
hg18_v1_chr6_+_118976134_118976183	0.0103633	SOX2.p2	NM_002667|PLN|5350|phospholamban	M63603|PLN|5350|phospholamban	AK311799|PLN|5350|phospholamban	BC005269|PLN|5350|phospholamban
hg18_v1_chr3_+_47819631_47819689	0.0103597	SOX2.p2	AK096791|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	BC020126|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	BC038417|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	BC015029|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	AB020697|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	BC063510|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30
hg18_v1_chr14_-_46882144_46882187	0.0103487	SOX2.p2	BC028193|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2	NM_182830|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2
hg18_v1_chr17_-_23950142_23950165	0.0103454	SOX2.p2	BC000322|SPAG5|10615|sperm associated antigen 5	AF399910|SPAG5|10615|sperm associated antigen 5	AF063308|SPAG5|10615|sperm associated antigen 5
hg18_v1_chr17_+_63252087_63252242	0.0103404	SOX2.p2	AK297281|BPTF|2186|bromodomain PHD finger transcription factor	BC037422|BPTF|2186|bromodomain PHD finger transcription factor	NM_004459|BPTF|2186|bromodomain PHD finger transcription factor	NM_182641|BPTF|2186|bromodomain PHD finger transcription factor	AB032251|BPTF|2186|bromodomain PHD finger transcription factor
hg18_v1_chrX_+_99786044_99786058	0.0103376	SOX2.p2	BC020733|SRPX2|27286|sushi-repeat containing protein, X-linked 2
hg18_v1_chr5_+_109052945_109052982	0.0102885	SOX2.p2	BC031659|MAN2A1|4124|mannosidase, alpha, class 2A, member 1
hg18_v1_chr8_-_74822206_74822294	0.0102585	SOX2.p2	AK307841|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	AK293729|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)
hg18_v1_chr5_+_1854493_1854531	0.0102358	SOX2.p2	NM_004553|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)	AK022503|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)	BC038664|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)	AF044959|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)	BC046155|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)	CR456880|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)
hg18_v1_chr6_-_30136734_30136950	0.0102	SOX2.p2	AF032109|ZNRD1-AS1|80862|ZNRD1 antisense RNA 1 (non-protein coding)	CR611202|ZNRD1-AS1|80862|ZNRD1 antisense RNA 1 (non-protein coding)	AK126001|ZNRD1-AS1|80862|ZNRD1 antisense RNA 1 (non-protein coding)	BX648746|ZNRD1-AS1|80862|ZNRD1 antisense RNA 1 (non-protein coding)	AF032110|ZNRD1-AS1|80862|ZNRD1 antisense RNA 1 (non-protein coding)
hg18_v1_chr5_+_125786717_125786767	0.0101958	SOX2.p2	NM_001146320|GRAMD3|65983|GRAM domain containing 3	NM_001146321|GRAMD3|65983|GRAM domain containing 3	NM_023927|GRAMD3|65983|GRAM domain containing 3
hg18_v1_chr6_+_151228383_151228544	0.0101792	SOX2.p2	NM_015440|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	AY374130|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	AY374131|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like
hg18_v1_chr11_-_66070050_66070077	0.0101778	SOX2.p2	BC057833|ZDHHC24|254359|zinc finger, DHHC-type containing 24
hg18_v1_chr5_+_55069601_55069665	0.0101685	SOX2.p2	NM_001142549|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	NM_001166533|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	NM_024415|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	BC030638|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	AK308300|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	AK292417|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	BC088362|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	BC047455|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4
hg18_v1_chr3_-_45242808_45242850	0.0101593	SOX2.p2	NM_015444|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)
hg18_v1_chr1_-_210654696_210654857	0.0101526	SOX2.p2	AK295224|TMEM206|55248|transmembrane protein 206	CR457268|TMEM206|55248|transmembrane protein 206	BC006320|TMEM206|55248|transmembrane protein 206
hg18_v1_chr17_+_43480723_43480723	0.0101431	SOX2.p2	AL833530|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1
hg18_v1_chr19_+_977601_977605	0.0101395	SOX2.p2	CR592088|CNN2|1265|calponin 2	CR602855|CNN2|1265|calponin 2	CR607371|CNN2|1265|calponin 2
hg18_v1_chr3_-_184628548_184628719	0.0101374	SOX2.p2	NM_015078|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2	BC064632|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2	AK124500|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2	AK310962|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2
hg18_v1_chr8_-_103206310_103206310	0.0101355	SOX2.p2	NM_001040630|NCALD|83988|neurocalcin delta
hg18_v1_chr2_+_11212990_11213015	0.0101281	SOX2.p2	BC027625|PQLC3|130814|PQ loop repeat containing 3	NM_152391|PQLC3|130814|PQ loop repeat containing 3
hg18_v1_chr22_-_18484744_18484792	0.0101257	SOX2.p2	CR592601|TRMT2A|27037|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	AK304068|TRMT2A|27037|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	CR608558|TRMT2A|27037|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	AK057029|TRMT2A|27037|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	NM_022727|TRMT2A|27037|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	NM_182984|TRMT2A|27037|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)
hg18_v1_chr14_-_104332895_104332940	0.0101242	SOX2.p2	BC063408|AKT1|207|v-akt murine thymoma viral oncogene homolog 1
hg18_v1_chr12_+_64869271_64869283	0.0101179	SOX2.p2	AF113136|IRAK3|11213|interleukin-1 receptor-associated kinase 3
hg18_v1_chr11_+_440346_440396	0.0101178	SOX2.p2	AK311723|PTDSS2|81490|phosphatidylserine synthase 2	AL834357|PTDSS2|81490|phosphatidylserine synthase 2
hg18_v1_chr12_+_54172413_54172413	0.0100423	SOX2.p2	NM_001005519|OR6C68|403284|olfactory receptor, family 6, subfamily C, member 68
hg18_v1_chr3_+_195688974_195689208	0.0100375	SOX2.p2	AK091527|FLJ34208|401106|hypothetical LOC401106
hg18_v1_chr22_+_18485095_18485118	0.0100371	SOX2.p2	CR456556|RANBP1|5902|RAN binding protein 1
hg18_v1_chr8_-_27171852_27171897	0.0100288	SOX2.p2	AK297415|STMN4|81551|stathmin-like 4
hg18_v1_chr1_-_151333624_151333624	0.00999887	SOX2.p2	M20030|SPRR2E|6704|small proline-rich protein 2E	NM_001024209|SPRR2E|6704|small proline-rich protein 2E
hg18_v1_chr5_+_126140718_126140743	0.00999008	SOX2.p2	BC103723|LMNB1|4001|lamin B1	AK303084|LMNB1|4001|lamin B1	NM_001198557|LMNB1|4001|lamin B1
hg18_v1_chr5_-_157011949_157012005	0.00998659	SOX2.p2	AB022083|SOX30|11063|SRY (sex determining region Y)-box 30	AB022441|SOX30|11063|SRY (sex determining region Y)-box 30	AK308329|SOX30|11063|SRY (sex determining region Y)-box 30	BC033492|SOX30|11063|SRY (sex determining region Y)-box 30	NM_007017|SOX30|11063|SRY (sex determining region Y)-box 30	NM_178424|SOX30|11063|SRY (sex determining region Y)-box 30
hg18_v1_chrX_-_114374860_114374890	0.00996108	SOX2.p2	BC125223|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2	BC125224|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2	BX647193|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2	NM_020871|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2
hg18_v1_chr9_+_115678365_115678476	0.00995916	SOX2.p2	BC036039|ZNF618|114991|zinc finger protein 618	NM_133374|ZNF618|114991|zinc finger protein 618	BC136287|ZNF618|114991|zinc finger protein 618	BC143826|ZNF618|114991|zinc finger protein 618	AK126896|ZNF618|114991|zinc finger protein 618	BC053892|ZNF618|114991|zinc finger protein 618
hg18_v1_chr6_-_111243309_111243529	0.00995743	SOX2.p2	BC024247|CDK19|23097|cyclin-dependent kinase 19
hg18_v1_chr2_-_55131124_55131138	0.00992701	SOX2.p2	BC026788|RTN4|57142|reticulon 4
hg18_v1_chr2_+_102294393_102294454	0.00992608	SOX2.p2	AB012701|IL1RL1|9173|interleukin 1 receptor-like 1	NM_016232|IL1RL1|9173|interleukin 1 receptor-like 1	AK313967|IL18R1|8809|interleukin 18 receptor 1	AK303389|IL1RL1|9173|interleukin 1 receptor-like 1
hg18_v1_chr6_+_29382381_29382445	0.0099227	SOX2.p2	BC136905|OR14J1|442191|olfactory receptor, family 14, subfamily J, member 1	NM_030946|OR14J1|442191|olfactory receptor, family 14, subfamily J, member 1
hg18_v1_chr10_-_119795663_119796405	0.0099203	SOX2.p2	DQ013303|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)	BC075073|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)	BC075074|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)	AB023158|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)	AY037299|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)	NM_014904|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)
hg18_v1_chr6_+_151228577_151228651	0.00992003	SOX2.p2	BC136685|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	BC144368|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	BC144369|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	AB127387|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like
hg18_v1_chr8_+_145136226_145136304	0.00991544	SOX2.p2	BC041788|GRINA|2907|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)	AB097026|GRINA|2907|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)	AK294127|GRINA|2907|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)
hg18_v1_chr12_+_105275565_105275636	0.00989145	SOX2.p2	NM_018082|POLR3B|55703|polymerase (RNA) III (DNA directed) polypeptide B	BX537447|POLR3B|55703|polymerase (RNA) III (DNA directed) polypeptide B
hg18_v1_chr8_+_90839336_90839503	0.0098861	SOX2.p2	AY524045|RIPK2|8767|receptor-interacting serine-threonine kinase 2	AF078530|RIPK2|8767|receptor-interacting serine-threonine kinase 2	AY562996|RIPK2|8767|receptor-interacting serine-threonine kinase 2
hg18_v1_chr2_-_37752731_37753056	0.00987277	SOX2.p2	AL136842|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3	NM_006449|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3
hg18_v1_chr13_-_23369124_23369193	0.00985542	SOX2.p2	NM_001007537|C1QTNF9B|387911|C1q and tumor necrosis factor related protein 9B	BC137004|C1QTNF9B|387911|C1q and tumor necrosis factor related protein 9B	BC137006|C1QTNF9B|387911|C1q and tumor necrosis factor related protein 9B	BC144450|C1QTNF9B|387911|C1q and tumor necrosis factor related protein 9B
hg18_v1_chr19_+_57564981_57565025	0.00985104	SOX2.p2	NM_001145434|ZNF880|400713|zinc finger protein 880	BC056265|ZNF880|400713|zinc finger protein 880	BC058819|ZNF880|400713|zinc finger protein 880	AK297834|ZNF880|400713|zinc finger protein 880	BC013198|ZNF880|400713|zinc finger protein 880	AF088022|ZNF880|400713|zinc finger protein 880
hg18_v1_chr12_+_56462794_56462885	0.00984353	SOX2.p2	NM_001172695|TSFM|10102|Ts translation elongation factor, mitochondrial	NM_001172696|TSFM|10102|Ts translation elongation factor, mitochondrial	NM_001172697|TSFM|10102|Ts translation elongation factor, mitochondrial	NM_005726|TSFM|10102|Ts translation elongation factor, mitochondrial	AK304621|TSFM|10102|Ts translation elongation factor, mitochondrial	AK313453|TSFM|10102|Ts translation elongation factor, mitochondrial	CR592271|TSFM|10102|Ts translation elongation factor, mitochondrial	BC022862|TSFM|10102|Ts translation elongation factor, mitochondrial	AK295323|TSFM|10102|Ts translation elongation factor, mitochondrial	AK308981|TSFM|10102|Ts translation elongation factor, mitochondrial	BC093068|TSFM|10102|Ts translation elongation factor, mitochondrial	AF110399|TSFM|10102|Ts translation elongation factor, mitochondrial	CR622683|TSFM|10102|Ts translation elongation factor, mitochondrial	CR606259|TSFM|10102|Ts translation elongation factor, mitochondrial
hg18_v1_chr8_-_145122884_145122946	0.00982007	SOX2.p2	U53204|PLEC|5339|plectin	NM_000445|PLEC|5339|plectin
hg18_v1_chr10_+_98582005_98582082	0.00979779	SOX2.p2	NM_001170765|LCOR|84458|ligand dependent nuclear receptor corepressor	NM_001170766|LCOR|84458|ligand dependent nuclear receptor corepressor	AL832106|LCOR|84458|ligand dependent nuclear receptor corepressor	BC053359|LCOR|84458|ligand dependent nuclear receptor corepressor
hg18_v1_chr5_-_177986695_177986763	0.00977755	SOX2.p2	AK308674|CLK4|57396|CDC-like kinase 4
hg18_v1_chr7_-_50485515_50485581	0.00977428	SOX2.p2	BC051867|FIGNL1|63979|fidgetin-like 1	AK308136|FIGNL1|63979|fidgetin-like 1	AK023142|FIGNL1|63979|fidgetin-like 1	AK027537|FIGNL1|63979|fidgetin-like 1	NM_001042762|FIGNL1|63979|fidgetin-like 1	NM_022116|FIGNL1|63979|fidgetin-like 1
hg18_v1_chr4_-_57217226_57217444	0.0097725	SOX2.p2	BC014225|HOPX|84525|HOP homeobox	AB059410|HOPX|84525|HOP homeobox	AF492680|HOPX|84525|HOP homeobox	AF492681|HOPX|84525|HOP homeobox	NM_001145459|HOPX|84525|HOP homeobox	NM_139211|HOPX|84525|HOP homeobox
hg18_v1_chr7_-_6832350_6832377	0.0097723	SOX2.p2	AK296026|C7orf28B|221960|chromosome 7 open reading frame 28B	AK000993|C7orf28B|221960|chromosome 7 open reading frame 28B	CR602854|C7orf28B|221960|chromosome 7 open reading frame 28B
hg18_v1_chr7_-_72894774_72894822	0.0097023	SOX2.p2	AK301597|WBSCR27|155368|Williams Beuren syndrome chromosome region 27	AF534110|WBSCR27|155368|Williams Beuren syndrome chromosome region 27	NM_152559|WBSCR27|155368|Williams Beuren syndrome chromosome region 27	AY354928|WBSCR27|155368|Williams Beuren syndrome chromosome region 27
hg18_v1_chr11_+_737428_737440	0.00969585	SOX2.p2	L19437|TALDO1|6888|transaldolase 1	NM_006755|TALDO1|6888|transaldolase 1
hg18_v1_chr2_-_178461710_178461711	0.009689	SOX2.p2	AJ251509|PDE11A|50940|phosphodiesterase 11A	NM_001077196|PDE11A|50940|phosphodiesterase 11A
hg18_v1_chr18_-_76106221_76106479	0.00967104	SOX2.p2	AB044556|PARD6G|84552|par-6 partitioning defective 6 homolog gamma (C. elegans)	AB178535|PARD6G|84552|par-6 partitioning defective 6 homolog gamma (C. elegans)	AB178536|PARD6G|84552|par-6 partitioning defective 6 homolog gamma (C. elegans)	BC060797|PARD6G|84552|par-6 partitioning defective 6 homolog gamma (C. elegans)	NM_032510|PARD6G|84552|par-6 partitioning defective 6 homolog gamma (C. elegans)
hg18_v1_chr17_+_27701300_27701417	0.00965634	SOX2.p2	AK291801|ZNF207|7756|zinc finger protein 207	AK309979|ZNF207|7756|zinc finger protein 207	BC008023|ZNF207|7756|zinc finger protein 207	AB209215|ZNF207|7756|zinc finger protein 207	CR616570|ZNF207|7756|zinc finger protein 207	CR617272|ZNF207|7756|zinc finger protein 207	BC000962|ZNF207|7756|zinc finger protein 207	BT007365|ZNF207|7756|zinc finger protein 207
hg18_v1_chr9_+_4652285_4652337	0.00956833	SOX2.p2	BC038108|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2	NM_203453|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2	AK074672|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2	AK128369|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2
hg18_v1_chr12_+_32003648_32003674	0.00956346	SOX2.p2	AK092399|C12orf35|55196|chromosome 12 open reading frame 35	BC140819|C12orf35|55196|chromosome 12 open reading frame 35
hg18_v1_chr19_-_12695628_12695841	0.00955618	SOX2.p2	AF007748|TNPO2|30000|transportin 2	AK056183|TNPO2|30000|transportin 2	NM_001136195|TNPO2|30000|transportin 2
hg18_v1_chr17_-_38978772_38978830	0.00955448	SOX2.p2	BC016623|ETV4|2118|ets variant 4	AK290429|ETV4|2118|ets variant 4	AK299019|ETV4|2118|ets variant 4	AK312934|ETV4|2118|ets variant 4	NM_001986|ETV4|2118|ets variant 4
hg18_v1_chr6_+_30796121_30796122	0.00955258	SOX2.p2	CR594701|TUBB|203068|tubulin, beta	CR594975|TUBB|203068|tubulin, beta	CR597459|TUBB|203068|tubulin, beta	CR599205|TUBB|203068|tubulin, beta	CR615134|TUBB|203068|tubulin, beta	CR618102|TUBB|203068|tubulin, beta	CR619725|TUBB|203068|tubulin, beta	CR624578|TUBB|203068|tubulin, beta	CR624775|TUBB|203068|tubulin, beta	CR626650|TUBB|203068|tubulin, beta	CR626716|TUBB|203068|tubulin, beta	CR626734|TUBB|203068|tubulin, beta	CR598038|TUBB|203068|tubulin, beta	CR603542|TUBB|203068|tubulin, beta	CR609663|TUBB|203068|tubulin, beta	CR610813|TUBB|203068|tubulin, beta	CR621201|TUBB|203068|tubulin, beta	CR621356|TUBB|203068|tubulin, beta	CR626264|TUBB|203068|tubulin, beta
hg18_v1_chrX_+_46938215_46938240	0.00954778	SOX2.p2	M58028|UBA1|7317|ubiquitin-like modifier activating enzyme 1
hg18_v1_chr4_+_120167721_120167721	0.00953094	SOX2.p2	FN422000|SYNPO2|171024|synaptopodin 2
hg18_v1_chr17_-_77093709_77093999	0.00949364	SOX2.p2	CR602100|ACTG1|71|actin, gamma 1	CR621646|ACTG1|71|actin, gamma 1	CR602869|ACTG1|71|actin, gamma 1	CR615492|ACTG1|71|actin, gamma 1	CR594886|ACTG1|71|actin, gamma 1	CR614104|ACTG1|71|actin, gamma 1	BC017450|ACTG1|71|actin, gamma 1	CR598949|ACTG1|71|actin, gamma 1	BC004223|ACTG1|71|actin, gamma 1	BC063495|ACTG1|71|actin, gamma 1	BT019856|ACTG1|71|actin, gamma 1	DQ891374|ACTG1|71|actin, gamma 1	EU176631|ACTG1|71|actin, gamma 1	EU832621|ACTG1|71|actin, gamma 1	EU832693|ACTG1|71|actin, gamma 1	CR619201|ACTG1|71|actin, gamma 1	CR612577|ACTG1|71|actin, gamma 1	CR626047|ACTG1|71|actin, gamma 1	CR600154|ACTG1|71|actin, gamma 1	CR605249|ACTG1|71|actin, gamma 1	CR623959|ACTG1|71|actin, gamma 1
hg18_v1_chr20_+_61622985_61623074	0.00944094	SOX2.p2	CR608021|PPDPF|79144|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)
hg18_v1_chr6_-_100123238_100123410	0.00943419	SOX2.p2	BC010135|CCNC|892|cyclin C	CR595249|CCNC|892|cyclin C	AK298558|CCNC|892|cyclin C	BC041123|CCNC|892|cyclin C	NM_001013399|CCNC|892|cyclin C	NM_005190|CCNC|892|cyclin C
hg18_v1_chr2_-_10870254_10870305	0.00942866	SOX2.p2	DQ891186|PDIA6|10130|protein disulfide isomerase family A, member 6	DQ894369|PDIA6|10130|protein disulfide isomerase family A, member 6	CR618905|PDIA6|10130|protein disulfide isomerase family A, member 6	AK289428|PDIA6|10130|protein disulfide isomerase family A, member 6
hg18_v1_chr1_+_156716290_156716291	0.00942347	SOX2.p2	NM_001004472|OR10R2|343406|olfactory receptor, family 10, subfamily R, member 2
hg18_v1_chr22_-_30071565_30071686	0.00942275	SOX2.p2	AL096880|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	AF242522|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	CR456613|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1
hg18_v1_chr16_+_1668291_1668324	0.00938912	SOX2.p2	BC014438|HN1L|90861|hematological and neurological expressed 1-like	AK296888|HN1L|90861|hematological and neurological expressed 1-like	AK303927|HN1L|90861|hematological and neurological expressed 1-like	AY598330|HN1L|90861|hematological and neurological expressed 1-like	AK309930|HN1L|90861|hematological and neurological expressed 1-like
hg18_v1_chr2_+_185171682_185171793	0.00938121	SOX2.p2	BC136602|ZNF804A|91752|zinc finger protein 804A
hg18_v1_chr15_-_26240844_26240903	0.00933573	SOX2.p2	AF071172|HERC2|8924|hect domain and RLD 2	BC015486|HERC2|8924|hect domain and RLD 2	BC142951|HERC2|8924|hect domain and RLD 2	BC045544|HERC2|8924|hect domain and RLD 2	NM_004667|HERC2|8924|hect domain and RLD 2	AF041081|HERC2P2|400322|hect domain and RLD 2 pseudogene 2
hg18_v1_chr3_-_153470022_153470049	0.00930497	SOX2.p2	AK304857|LOC401093|401093|hypothetical LOC401093	AK316515|LOC401093|401093|hypothetical LOC401093
hg18_v1_chr11_+_33235743_33235980	0.0092711	SOX2.p2	NM_001048200|HIPK3|10114|homeodomain interacting protein kinase 3	NM_005734|HIPK3|10114|homeodomain interacting protein kinase 3	Y09306|HIPK3|10114|homeodomain interacting protein kinase 3	AF305239|HIPK3|10114|homeodomain interacting protein kinase 3
hg18_v1_chr16_+_1143241_1143413	0.00926318	SOX2.p2	AF073931|CACNA1H|8912|calcium channel, voltage-dependent, T type, alpha 1H subunit	NM_001005407|CACNA1H|8912|calcium channel, voltage-dependent, T type, alpha 1H subunit	NM_021098|CACNA1H|8912|calcium channel, voltage-dependent, T type, alpha 1H subunit	AF051946|CACNA1H|8912|calcium channel, voltage-dependent, T type, alpha 1H subunit
hg18_v1_chr19_+_45774636_45774742	0.00924985	SOX2.p2	CR598538|SHKBP1|92799|SH3KBP1 binding protein 1
hg18_v1_chr12_-_18782184_18782257	0.00923965	SOX2.p2	AF532185|PLCZ1|89869|phospholipase C, zeta 1	NM_033123|PLCZ1|89869|phospholipase C, zeta 1	AK314516|PLCZ1|89869|phospholipase C, zeta 1	AY035866|PLCZ1|89869|phospholipase C, zeta 1	AK292279|PLCZ1|89869|phospholipase C, zeta 1
hg18_v1_chr11_-_125586733_125586796	0.00922606	SOX2.p2	CR608864|RPUSD4|84881|RNA pseudouridylate synthase domain containing 4	AK027400|RPUSD4|84881|RNA pseudouridylate synthase domain containing 4	AK308059|RPUSD4|84881|RNA pseudouridylate synthase domain containing 4	AK225320|RPUSD4|84881|RNA pseudouridylate synthase domain containing 4	BC014131|RPUSD4|84881|RNA pseudouridylate synthase domain containing 4	NM_001144827|RPUSD4|84881|RNA pseudouridylate synthase domain containing 4	NM_032795|RPUSD4|84881|RNA pseudouridylate synthase domain containing 4
hg18_v1_chrX_+_108666725_108666765	0.00916378	SOX2.p2	AF201942|NXT2|55916|nuclear transport factor 2-like export factor 2	BC014888|NXT2|55916|nuclear transport factor 2-like export factor 2	AF212223|NXT2|55916|nuclear transport factor 2-like export factor 2
hg18_v1_chr1_+_86943103_86943182	0.00915956	SOX2.p2	BC007455|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	CR600351|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	AF151819|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	AF257318|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	AF263293|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	DQ893029|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	DQ896273|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1
hg18_v1_chr18_+_3437607_3437627	0.00915217	SOX2.p2	NM_173207|TGIF1|7050|TGFB-induced factor homeobox 1	AK291112|TGIF1|7050|TGFB-induced factor homeobox 1
hg18_v1_chr6_+_73133152_73133205	0.00913841	SOX2.p2	NM_001168411|RIMS1|22999|regulating synaptic membrane exocytosis 1	AK300853|RIMS1|22999|regulating synaptic membrane exocytosis 1
hg18_v1_chr17_+_7427877_7427915	0.00913115	SOX2.p2	BC001898|MPDU1|9526|mannose-P-dolichol utilization defect 1	AF038961|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK027742|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK075299|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK225401|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK225432|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK297001|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK297691|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK314527|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK055923|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK300083|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK300140|MPDU1|9526|mannose-P-dolichol utilization defect 1	CR609049|MPDU1|9526|mannose-P-dolichol utilization defect 1	DQ499597|MPDU1|9526|mannose-P-dolichol utilization defect 1	CR601665|MPDU1|9526|mannose-P-dolichol utilization defect 1	CR600077|MPDU1|9526|mannose-P-dolichol utilization defect 1	CR591406|MPDU1|9526|mannose-P-dolichol utilization defect 1	CR618168|MPDU1|9526|mannose-P-dolichol utilization defect 1	CR610474|MPDU1|9526|mannose-P-dolichol utilization defect 1
hg18_v1_chrX_-_100193500_100193575	0.0091013	SOX2.p2	CR605503|TRMT2B|79979|TRM2 tRNA methyltransferase 2 homolog B (S. cerevisiae)	AK315780|TRMT2B|79979|TRM2 tRNA methyltransferase 2 homolog B (S. cerevisiae)	AK022749|TRMT2B|79979|TRM2 tRNA methyltransferase 2 homolog B (S. cerevisiae)
hg18_v1_chr15_+_73278285_73278314	0.00900246	SOX2.p2	AK128205|C15orf39|56905|chromosome 15 open reading frame 39
hg18_v1_chr1_-_84237316_84237453	0.00895041	SOX2.p2	AK126792|TTLL7|79739|tubulin tyrosine ligase-like family, member 7	BC048970|TTLL7|79739|tubulin tyrosine ligase-like family, member 7	BC032829|TTLL7|79739|tubulin tyrosine ligase-like family, member 7	BC060878|TTLL7|79739|tubulin tyrosine ligase-like family, member 7	BC028350|TTLL7|79739|tubulin tyrosine ligase-like family, member 7	NM_024686|TTLL7|79739|tubulin tyrosine ligase-like family, member 7
hg18_v1_chr1_+_229731021_229731088	0.00893758	SOX2.p2	FJ804217|TSNAX-DISC1|100303453|TSNAX-DISC1 read-through gene	FJ804218|TSNAX-DISC1|100303453|TSNAX-DISC1 read-through gene	FJ804219|TSNAX-DISC1|100303453|TSNAX-DISC1 read-through gene	FJ804220|TSNAX-DISC1|100303453|TSNAX-DISC1 read-through gene	FJ804221|TSNAX-DISC1|100303453|TSNAX-DISC1 read-through gene	FJ804222|TSNAX-DISC1|100303453|TSNAX-DISC1 read-through gene	FJ804223|TSNAX-DISC1|100303453|TSNAX-DISC1 read-through gene	FJ804224|TSNAX-DISC1|100303453|TSNAX-DISC1 read-through gene	NM_005999|TSNAX|7257|translin-associated factor X	X95073|TSNAX|7257|translin-associated factor X	BC011797|TSNAX|7257|translin-associated factor X	BC010376|TSNAX|7257|translin-associated factor X	AK313068|TSNAX|7257|translin-associated factor X
hg18_v1_chr14_-_49170407_49170486	0.00891486	SOX2.p2	BC013322|C14orf104|55172|chromosome 14 open reading frame 104	BX248264|C14orf104|55172|chromosome 14 open reading frame 104	CR619602|C14orf104|55172|chromosome 14 open reading frame 104	BC011400|C14orf104|55172|chromosome 14 open reading frame 104	AK001425|C14orf104|55172|chromosome 14 open reading frame 104
hg18_v1_chr5_+_54434230_54434267	0.00891344	SOX2.p2	NM_006144|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)	BC015739|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)	DQ893071|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)	DQ896326|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)	CR456968|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)	M18737|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)
hg18_v1_chr9_-_139202804_139202830	0.00890674	SOX2.p2	AF191337|ANAPC2|29882|anaphase promoting complex subunit 2	DQ890852|ANAPC2|29882|anaphase promoting complex subunit 2	DQ894007|ANAPC2|29882|anaphase promoting complex subunit 2	BC032503|ANAPC2|29882|anaphase promoting complex subunit 2	AK296204|ANAPC2|29882|anaphase promoting complex subunit 2
hg18_v1_chr1_-_23758503_23758640	0.00889161	SOX2.p2	BT006791|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	DQ892504|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	DQ895539|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	DQ895717|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	CR612668|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	CR597388|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	CR615457|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	CR611504|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	BC003107|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	D28449|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	AK290003|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein
hg18_v1_chr17_+_24394043_24394043	0.00884092	SOX2.p2	BC008960|PIPOX|51268|pipecolic acid oxidase	NM_016518|PIPOX|51268|pipecolic acid oxidase
hg18_v1_chr19_+_45774632_45774632	0.00880172	SOX2.p2	AK312748|SHKBP1|92799|SH3KBP1 binding protein 1
hg18_v1_chr6_-_35764655_35764713	0.00877694	SOX2.p2	BC111050|FKBP5|2289|FK506 binding protein 5	AK222807|FKBP5|2289|FK506 binding protein 5	AK302704|FKBP5|2289|FK506 binding protein 5	AK303356|FKBP5|2289|FK506 binding protein 5	AK312422|FKBP5|2289|FK506 binding protein 5	BX647390|FKBP5|2289|FK506 binding protein 5	NM_001145776|FKBP5|2289|FK506 binding protein 5	AF194172|FKBP5|2289|FK506 binding protein 5	U71321|FKBP5|2289|FK506 binding protein 5	NM_001145777|FKBP5|2289|FK506 binding protein 5	NM_004117|FKBP5|2289|FK506 binding protein 5
hg18_v1_chr19_-_6410735_6410875	0.00875194	SOX2.p2	AJ619962|SLC25A23|79085|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23	AJ512835|SLC25A23|79085|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23	AJ619988|SLC25A23|79085|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23	AY750170|SLC25A23|79085|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23	BC001656|SLC25A23|79085|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23	NM_024103|SLC25A23|79085|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23
hg18_v1_chr5_+_94916533_94916738	0.00873334	SOX2.p2	AK303855|ARSK|153642|arylsulfatase family, member K	AK316253|ARSK|153642|arylsulfatase family, member K	NM_198150|ARSK|153642|arylsulfatase family, member K	AY358596|ARSK|153642|arylsulfatase family, member K	BC050392|ARSK|153642|arylsulfatase family, member K	BC130329|ARSK|153642|arylsulfatase family, member K	BC144160|ARSK|153642|arylsulfatase family, member K	BC144161|ARSK|153642|arylsulfatase family, member K	BC036047|ARSK|153642|arylsulfatase family, member K	AY875939|ARSK|153642|arylsulfatase family, member K
hg18_v1_chr19_-_57100052_57100116	0.00873307	SOX2.p2	AK000909|ZNF649|65251|zinc finger protein 649	CR590368|ZNF649|65251|zinc finger protein 649	AL713677|ZNF649|65251|zinc finger protein 649	AK225480|ZNF649|65251|zinc finger protein 649	BC005368|ZNF649|65251|zinc finger protein 649	AK315487|ZNF649|65251|zinc finger protein 649	NM_023074|ZNF649|65251|zinc finger protein 649
hg18_v1_chr4_+_142361494_142361516	0.00873103	SOX2.p2	NM_014487|ZNF330|27309|zinc finger protein 330	AK315463|ZNF330|27309|zinc finger protein 330	BC004421|ZNF330|27309|zinc finger protein 330
hg18_v1_chrX_-_46289765_46289835	0.00872947	SOX2.p2	AK295054|ZNF674|641339|zinc finger protein 674	AK308986|ZNF674|641339|zinc finger protein 674	AY971607|ZNF674|641339|zinc finger protein 674	NM_001039891|ZNF674|641339|zinc finger protein 674	NM_001146291|ZNF674|641339|zinc finger protein 674	NM_001190417|ZNF674|641339|zinc finger protein 674
hg18_v1_chr4_+_5104365_5104491	0.00871651	SOX2.p2	AJ250839|STK32B|55351|serine/threonine kinase 32B	NM_018401|STK32B|55351|serine/threonine kinase 32B	BC038238|STK32B|55351|serine/threonine kinase 32B	DQ890554|STK32B|55351|serine/threonine kinase 32B	DQ893714|STK32B|55351|serine/threonine kinase 32B
hg18_v1_chr1_+_234625338_234625552	0.00871175	SOX2.p2	AK096339|EDARADD|128178|EDAR-associated death domain	NM_080738|EDARADD|128178|EDAR-associated death domain	AY028914|EDARADD|128178|EDAR-associated death domain	AK291930|EDARADD|128178|EDAR-associated death domain	BC006533|EDARADD|128178|EDAR-associated death domain	AY071862|EDARADD|128178|EDAR-associated death domain
hg18_v1_chr1_-_172059780_172059949	0.00871097	SOX2.p2	CR617320|CENPL|91687|centromere protein L	AK055606|CENPL|91687|centromere protein L	BC019022|CENPL|91687|centromere protein L	NM_001171182|CENPL|91687|centromere protein L	BC007071|CENPL|91687|centromere protein L
hg18_v1_chr15_+_100163424_100163445	0.00870474	SOX2.p2	BC137002|OR4F6|390648|olfactory receptor, family 4, subfamily F, member 6	BC137003|OR4F6|390648|olfactory receptor, family 4, subfamily F, member 6	NM_001005326|OR4F6|390648|olfactory receptor, family 4, subfamily F, member 6
hg18_v1_chr4_-_39205316_39205489	0.00870369	SOX2.p2	AF061016|UGDH|7358|UDP-glucose 6-dehydrogenase	AJ007702|UGDH|7358|UDP-glucose 6-dehydrogenase	BC022781|UGDH|7358|UDP-glucose 6-dehydrogenase	AK097930|UGDH|7358|UDP-glucose 6-dehydrogenase	AK297737|UGDH|7358|UDP-glucose 6-dehydrogenase
hg18_v1_chr3_+_198961020_198961158	0.00869223	SOX2.p2	BC035006|FYTTD1|84248|forty-two-three domain containing 1	NM_032288|FYTTD1|84248|forty-two-three domain containing 1	BC039734|FYTTD1|84248|forty-two-three domain containing 1	AK027672|FYTTD1|84248|forty-two-three domain containing 1
hg18_v1_chr3_-_185218311_185218459	0.00868446	SOX2.p2	BC142670|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	CR619835|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	BC142719|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	CR590924|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	U83661|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	AF104942|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	AY754874|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	AY754875|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	AY754876|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	AB209454|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	BC051358|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	NM_001023587|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	NM_005688|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5
hg18_v1_chr12_+_120944174_120944378	0.00865711	SOX2.p2	AK296159|BCL7A|605|B-cell CLL/lymphoma 7A	NM_001024808|BCL7A|605|B-cell CLL/lymphoma 7A	NM_020993|BCL7A|605|B-cell CLL/lymphoma 7A	AK316486|BCL7A|605|B-cell CLL/lymphoma 7A	BC113627|BCL7A|605|B-cell CLL/lymphoma 7A	BC094723|BCL7A|605|B-cell CLL/lymphoma 7A
hg18_v1_chr4_-_113777470_113777521	0.00857903	SOX2.p2	BC044799|C4orf21|55345|chromosome 4 open reading frame 21	BC028584|C4orf21|55345|chromosome 4 open reading frame 21	AK002193|C4orf21|55345|chromosome 4 open reading frame 21
hg18_v1_chr1_-_45444812_45444865	0.00857317	SOX2.p2	AB040944|ZSWIM5|57643|zinc finger, SWIM-type containing 5	NM_020883|ZSWIM5|57643|zinc finger, SWIM-type containing 5
hg18_v1_chr11_+_72696963_72697141	0.00856219	SOX2.p2	AK074500|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17
hg18_v1_chr5_-_43432969_43432997	0.00853695	SOX2.p2	AK307307|CCL28|56477|chemokine (C-C motif) ligand 28
hg18_v1_chr7_+_27746334_27746334	0.00852609	SOX2.p2	
hg18_v1_chr1_-_245561613_245561667	0.00850481	SOX2.p2	BC007263|ZNF496|84838|zinc finger protein 496	NM_032752|ZNF496|84838|zinc finger protein 496
hg18_v1_chr7_+_44802834_44802848	0.00849821	SOX2.p2	Y00052|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	CR609623|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	CR613992|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	DQ892625|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	DQ895865|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AB451307|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AB451438|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	CR456707|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)
hg18_v1_chr11_+_71469029_71469029	0.00849776	SOX2.p2	NM_001145308|LRTOMT|220074|leucine rich transmembrane and 0-methyltransferase domain containing	NM_001145309|LRTOMT|220074|leucine rich transmembrane and 0-methyltransferase domain containing	NM_001145310|LRTOMT|220074|leucine rich transmembrane and 0-methyltransferase domain containing
hg18_v1_chr5_-_157011665_157011748	0.00847874	SOX2.p2	
hg18_v1_chr5_-_40871082_40871143	0.00847476	SOX2.p2	AK311827|RPL37|6167|ribosomal protein L37	NM_000997|RPL37|6167|ribosomal protein L37
hg18_v1_chr9_-_139202855_139202877	0.00846665	SOX2.p2	NM_013366|ANAPC2|29882|anaphase promoting complex subunit 2
hg18_v1_chr12_-_47868563_47868740	0.0084638	SOX2.p2	AK289483|TUBA1A|7846|tubulin, alpha 1a
hg18_v1_chr1_-_144322295_144322385	0.00843431	SOX2.p2	CR605615|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)
hg18_v1_chr8_-_133561738_133561872	0.00843227	SOX2.p2	AB208890|KCNQ3|3786|potassium voltage-gated channel, KQT-like subfamily, member 3	AF033347|KCNQ3|3786|potassium voltage-gated channel, KQT-like subfamily, member 3
hg18_v1_chrX_-_49008115_49008231	0.00842663	SOX2.p2	AK292052|FOXP3|50943|forkhead box P3	AK299988|FOXP3|50943|forkhead box P3	AF277993|FOXP3|50943|forkhead box P3	NM_001114377|FOXP3|50943|forkhead box P3	NM_014009|FOXP3|50943|forkhead box P3
hg18_v1_chr1_+_112740322_112740376	0.00837114	SOX2.p2	NM_018704|CTTNBP2NL|55917|CTTNBP2 N-terminal like	AK023340|CTTNBP2NL|55917|CTTNBP2 N-terminal like
hg18_v1_chr2_+_11213020_11213044	0.00833727	SOX2.p2	AK001091|PQLC3|130814|PQ loop repeat containing 3
hg18_v1_chr10_+_123912930_123913001	0.00833678	SOX2.p2	BC039311|TACC2|10579|transforming, acidic coiled-coil containing protein 2
hg18_v1_chr17_-_64649608_64649732	0.00827276	SOX2.p2	BC125231|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6	BC125232|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6	AY028898|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6	NM_080284|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6	BC070125|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6	AK308431|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6	BC029852|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6
hg18_v1_chr19_+_40830964_40831050	0.00826159	SOX2.p2	NM_001863|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)	BC001015|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)
hg18_v1_chrX_-_13248438_13248438	0.00822496	SOX2.p2	AK302365|ATXN3L|92552|ataxin 3-like	NM_001135995|ATXN3L|92552|ataxin 3-like
hg18_v1_chr14_-_44673418_44673495	0.0082137	SOX2.p2	CR590899|FKBP3|2287|FK506 binding protein 3, 25kDa	AK311915|FKBP3|2287|FK506 binding protein 3, 25kDa	BC020809|FKBP3|2287|FK506 binding protein 3, 25kDa	AK222993|FKBP3|2287|FK506 binding protein 3, 25kDa	M96256|FKBP3|2287|FK506 binding protein 3, 25kDa	NM_002013|FKBP3|2287|FK506 binding protein 3, 25kDa
hg18_v1_chr5_-_60493985_60494063	0.00821054	SOX2.p2	BC103711|C5orf43|643155|chromosome 5 open reading frame 43	BX648459|C5orf43|643155|chromosome 5 open reading frame 43	CR599620|C5orf43|643155|chromosome 5 open reading frame 43	BC066550|C5orf43|643155|chromosome 5 open reading frame 43	BX538015|C5orf43|643155|chromosome 5 open reading frame 43	AK291180|C5orf43|643155|chromosome 5 open reading frame 43	NM_001048249|C5orf43|643155|chromosome 5 open reading frame 43
hg18_v1_chr5_-_40871040_40871080	0.00820938	SOX2.p2	BC079477|RPL37|6167|ribosomal protein L37	D23661|RPL37|6167|ribosomal protein L37	AB055770|RPL37|6167|ribosomal protein L37	AK124098|SNORD72|619564|small nucleolar RNA, C/D box 72	BC067790|RPL37|6167|ribosomal protein L37	BX647123|RPL37|6167|ribosomal protein L37
hg18_v1_chr13_-_29067584_29067658	0.00819901	SOX2.p2	X59155|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1	X57303|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1	AK312818|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1	BC063303|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1
hg18_v1_chr5_-_172687798_172687935	0.00819773	SOX2.p2	CR597612|STC2|8614|stanniocalcin 2	AF031036|STC2|8614|stanniocalcin 2	BT019591|STC2|8614|stanniocalcin 2	CR541825|STC2|8614|stanniocalcin 2	EU832632|STC2|8614|stanniocalcin 2	EU832707|STC2|8614|stanniocalcin 2	BC006352|STC2|8614|stanniocalcin 2	BC013958|STC2|8614|stanniocalcin 2	AF055460|STC2|8614|stanniocalcin 2	AB012664|STC2|8614|stanniocalcin 2	AF098462|STC2|8614|stanniocalcin 2
hg18_v1_chr7_+_44802798_44802826	0.00818189	SOX2.p2	AK290851|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC005982|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AK130101|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AK293003|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC007104|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC013915|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AK026569|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AK297340|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AK316564|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC093076|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AK290085|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC005320|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC106030|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC073992|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	CR626590|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC003026|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	CR618683|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	CR603867|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC000689|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)
hg18_v1_chr11_-_55438633_55438633	0.00816508	SOX2.p2	NM_001001960|OR5W2|390148|olfactory receptor, family 5, subfamily W, member 2
hg18_v1_chr4_-_103485309_103485390	0.00815282	SOX2.p2	AB040120|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8	NM_022154|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8	AK304274|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8
hg18_v1_chr18_+_53862386_53862683	0.00808817	SOX2.p2	NM_001144967|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	NM_015277|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like
hg18_v1_chr19_+_63053031_63053218	0.00805996	SOX2.p2	AK027616|ZNF587|84914|zinc finger protein 587	NM_032828|ZNF587|84914|zinc finger protein 587	BC126237|ZNF587|84914|zinc finger protein 587	BC126239|ZNF587|84914|zinc finger protein 587	BC144112|ZNF587|84914|zinc finger protein 587	BC144113|ZNF587|84914|zinc finger protein 587
hg18_v1_chr3_+_23822481_23822531	0.0080593	SOX2.p2	CR622042|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1 (UBC4/5 homolog, yeast)
hg18_v1_chr15_+_89444185_89444242	0.00805232	SOX2.p2	NM_001167580|SV2B|9899|synaptic vesicle glycoprotein 2B	AK294902|SV2B|9899|synaptic vesicle glycoprotein 2B
hg18_v1_chr2_+_114390975_114390991	0.00802729	SOX2.p2	AB209353|ACTR3|10096|ARP3 actin-related protein 3 homolog (yeast)
hg18_v1_chr13_-_35818603_35818645	0.0079984	SOX2.p2	BC026284|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)	NM_001142296|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)	NM_015087|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)
hg18_v1_chr1_+_202031425_202031430	0.0079954	SOX2.p2	AK296983|ZC3H11A|9877|zinc finger CCCH-type containing 11A
hg18_v1_chr16_-_56038771_56038940	0.00798618	SOX2.p2	CR590040|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	CR613398|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	CR625987|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	AK074263|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	BC002568|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	AK292281|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	CR624651|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	CR605182|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	CR610264|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	CR604417|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	CR623944|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	AL136613|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	BC071740|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	CR597348|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	CR605775|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	CR622197|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	CR625926|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	BC024196|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	AF248964|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	NM_020313|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	BC067303|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1
hg18_v1_chr12_-_108399476_108399505	0.00797227	SOX2.p2	AF113208|KCTD10|83892|potassium channel tetramerisation domain containing 10	BC040062|KCTD10|83892|potassium channel tetramerisation domain containing 10	AK056912|KCTD10|83892|potassium channel tetramerisation domain containing 10	AK222548|KCTD10|83892|potassium channel tetramerisation domain containing 10
hg18_v1_chr7_+_2565238_2565308	0.00792922	SOX2.p2	AK092404|IQCE|23288|IQ motif containing E	BC061518|IQCE|23288|IQ motif containing E	AL136792|IQCE|23288|IQ motif containing E	AK293372|IQCE|23288|IQ motif containing E
hg18_v1_chr3_+_39423183_39423245	0.00792026	SOX2.p2	BC070263|RPSA|3921|ribosomal protein SA	NM_002295|RPSA|3921|ribosomal protein SA	BC066941|RPSA|3921|ribosomal protein SA	BC107567|RPSA|3921|ribosomal protein SA	BC005391|RPSA|3921|ribosomal protein SA	BC062714|RPSA|3921|ribosomal protein SA	CR595716|RPSA|3921|ribosomal protein SA	AF503367|RPSA|3921|ribosomal protein SA	CR625327|RPSA|3921|ribosomal protein SA	BC013827|RPSA|3921|ribosomal protein SA	CR624384|RPSA|3921|ribosomal protein SA	BC050688|RPSA|3921|ribosomal protein SA	CR594860|RPSA|3921|ribosomal protein SA	CR608513|RPSA|3921|ribosomal protein SA	CR611940|RPSA|3921|ribosomal protein SA	CR612802|RPSA|3921|ribosomal protein SA	CR593226|RPSA|3921|ribosomal protein SA	CR593481|RPSA|3921|ribosomal protein SA	CR601130|RPSA|3921|ribosomal protein SA	CR608117|RPSA|3921|ribosomal protein SA	CR609304|RPSA|3921|ribosomal protein SA	CR611471|RPSA|3921|ribosomal protein SA	CR614112|RPSA|3921|ribosomal protein SA	CR614218|RPSA|3921|ribosomal protein SA	CR614827|RPSA|3921|ribosomal protein SA	CR616655|RPSA|3921|ribosomal protein SA	CR618995|RPSA|3921|ribosomal protein SA	CR623213|RPSA|3921|ribosomal protein SA	CR623621|RPSA|3921|ribosomal protein SA	X15005|RPSA|3921|ribosomal protein SA	BC034537|RPSA|3921|ribosomal protein SA	BC053370|RPSA|3921|ribosomal protein SA	BC071968|RPSA|3921|ribosomal protein SA	BC010418|RPSA|3921|ribosomal protein SA	CR590550|RPSA|3921|ribosomal protein SA	CR609795|RPSA|3921|ribosomal protein SA	CR614557|RPSA|3921|ribosomal protein SA	CR625028|RPSA|3921|ribosomal protein SA	CR626563|RPSA|3921|ribosomal protein SA	CR599598|RPSA|3921|ribosomal protein SA	BC071693|RPSA|3921|ribosomal protein SA	CR600444|RPSA|3921|ribosomal protein SA	BC018867|RPSA|3921|ribosomal protein SA	BC071969|RPSA|3921|ribosomal protein SA	BC073863|RPSA|3921|ribosomal protein SA	CR626298|RPSA|3921|ribosomal protein SA
hg18_v1_chr7_+_44802691_44802793	0.00790474	SOX2.p2	BC137057|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC137058|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	NM_021130|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	CR594762|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)
hg18_v1_chr1_+_8928508_8928532	0.0078814	SOX2.p2	NM_001215|CA6|765|carbonic anhydrase VI	AK300652|CA6|765|carbonic anhydrase VI	BC034350|CA6|765|carbonic anhydrase VI	M57892|CA6|765|carbonic anhydrase VI	AB102863|CA6|765|carbonic anhydrase VI	AB103091|CA6|765|carbonic anhydrase VI
hg18_v1_chr1_+_183392991_183393047	0.00785587	SOX2.p2	AK291443|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)
hg18_v1_chr4_-_54625522_54625525	0.00783785	SOX2.p2	CR624224|CHIC2|26511|cysteine-rich hydrophobic domain 2
hg18_v1_chr1_-_196776697_196776697	0.00780643	SOX2.p2	NM_133262|ATP6V1G3|127124|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G3	NM_133326|ATP6V1G3|127124|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G3
hg18_v1_chr2_+_74914742_74914795	0.00779658	SOX2.p2	AF148513|HK2|3099|hexokinase 2	BC021116|HK2|3099|hexokinase 2	BC064369|HK2|3099|hexokinase 2	AK290357|HK2|3099|hexokinase 2
hg18_v1_chr6_-_15356865_15356895	0.00775524	SOX2.p2	
hg18_v1_chr15_-_40628284_40628309	0.0077467	SOX2.p2	AK094891|LRRC57|255252|leucine rich repeat containing 57	NM_153260|LRRC57|255252|leucine rich repeat containing 57
hg18_v1_chr7_-_108311872_108311872	0.00769315	SOX2.p2	NM_001024607|C7orf66|154907|chromosome 7 open reading frame 66
hg18_v1_chr9_-_138412709_138412709	0.0076713	SOX2.p2	NM_003086|SNAPC4|6621|small nuclear RNA activating complex, polypeptide 4, 190kDa
hg18_v1_chr3_-_50311666_50311906	0.00766401	SOX2.p2	AF502909|HYAL3|8372|hyaluronoglucosaminidase 3	AF502910|HYAL3|8372|hyaluronoglucosaminidase 3	AF502911|HYAL3|8372|hyaluronoglucosaminidase 3	AF502912|HYAL3|8372|hyaluronoglucosaminidase 3	BC004483|NAT6|24142|N-acetyltransferase 6 (GCN5-related)	NM_012191|NAT6|24142|N-acetyltransferase 6 (GCN5-related)	CR594453|NAT6|24142|N-acetyltransferase 6 (GCN5-related)	CR608020|HYAL3|8372|hyaluronoglucosaminidase 3	BC005896|HYAL3|8372|hyaluronoglucosaminidase 3	BC035689|NAT6|24142|N-acetyltransferase 6 (GCN5-related)	AK313455|HYAL3|8372|hyaluronoglucosaminidase 3	AF040710|HYAL3|8372|hyaluronoglucosaminidase 3	CR614993|NAT6|24142|N-acetyltransferase 6 (GCN5-related)	BC051750|NAT6|24142|N-acetyltransferase 6 (GCN5-related)	CR595994|NAT6|24142|N-acetyltransferase 6 (GCN5-related)	AK313803|NAT6|24142|N-acetyltransferase 6 (GCN5-related)	AF036035|HYAL3|8372|hyaluronoglucosaminidase 3	NM_003549|HYAL3|8372|hyaluronoglucosaminidase 3
hg18_v1_chr13_+_110565587_110565874	0.00765709	SOX2.p2	BC060776|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7	NM_001113511|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7	NM_001113512|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7	NM_145735|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7	BC033905|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7	AL834228|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7	EU832819|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7	GQ129214|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7
hg18_v1_chr6_-_35764588_35764608	0.00764899	SOX2.p2	HM245391|FKBP5|2289|FK506 binding protein 5	AB209893|FKBP5|2289|FK506 binding protein 5
hg18_v1_chr3_+_130641840_130641865	0.00764613	SOX2.p2	AK298526|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	CR614053|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	AK299903|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	EU832629|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	EU832704|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)
hg18_v1_chr1_-_108544261_108544325	0.00760032	SOX2.p2	AF123303|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24	EU832524|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24	EU832606|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24	AJ619987|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24	AK316506|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24
hg18_v1_chr18_-_72858037_72858074	0.0075902	SOX2.p2	AK314553|MBP|4155|myelin basic protein	NM_001025081|MBP|4155|myelin basic protein	NM_001025090|MBP|4155|myelin basic protein	NM_001025092|MBP|4155|myelin basic protein	NM_002385|MBP|4155|myelin basic protein	AK293922|MBP|4155|myelin basic protein
hg18_v1_chr15_-_48434677_48434692	0.00755285	SOX2.p2	D13317|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	AK301350|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	BC036080|GABPB1|2553|GA binding protein transcription factor, beta subunit 1
hg18_v1_chr18_-_31178415_31178423	0.00753933	SOX2.p2	AK291246|ZNF24|7572|zinc finger protein 24	NM_006965|ZNF24|7572|zinc finger protein 24
hg18_v1_chr9_+_132961683_132961715	0.00753072	SOX2.p2	NM_001185095|AIF1L|83543|allograft inflammatory factor 1-like	NM_001185096|AIF1L|83543|allograft inflammatory factor 1-like	NM_031426|AIF1L|83543|allograft inflammatory factor 1-like
hg18_v1_chr14_+_103099031_103099097	0.00752232	SOX2.p2	NM_032374|C14orf153|84334|chromosome 14 open reading frame 153	CR619996|C14orf153|84334|chromosome 14 open reading frame 153	AK223092|C14orf153|84334|chromosome 14 open reading frame 153	AK223103|C14orf153|84334|chromosome 14 open reading frame 153	BC007412|C14orf153|84334|chromosome 14 open reading frame 153
hg18_v1_chr3_+_45705918_45705961	0.00751189	SOX2.p2	BC016559|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)	AL136831|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)	AK296421|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)	AM393061|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)
hg18_v1_chr2_-_55131176_55131197	0.00750919	SOX2.p2	AB040462|RTN4|57142|reticulon 4	AB040463|RTN4|57142|reticulon 4	AY102277|RTN4|57142|reticulon 4	AY102278|RTN4|57142|reticulon 4	AY102279|RTN4|57142|reticulon 4	BC016165|RTN4|57142|reticulon 4	BC068991|RTN4|57142|reticulon 4	BC150182|RTN4|57142|reticulon 4	BC152555|RTN4|57142|reticulon 4
hg18_v1_chr19_-_42393225_42393290	0.00750684	SOX2.p2	BC051277|ZNF585B|92285|zinc finger protein 585B	BC067088|ZNF585B|92285|zinc finger protein 585B	BC080550|ZNF585B|92285|zinc finger protein 585B	AY147015|ZNF585B|92285|zinc finger protein 585B	NM_152279|ZNF585B|92285|zinc finger protein 585B
hg18_v1_chr16_+_1668257_1668282	0.00749898	SOX2.p2	AK309909|HN1L|90861|hematological and neurological expressed 1-like	AK296998|HN1L|90861|hematological and neurological expressed 1-like	NM_144570|HN1L|90861|hematological and neurological expressed 1-like	AK023154|HN1L|90861|hematological and neurological expressed 1-like
hg18_v1_chr5_-_54639158_54639279	0.0074689	SOX2.p2	BC056219|DHX29|54505|DEAH (Asp-Glu-Ala-His) box polypeptide 29	AY036974|DHX29|54505|DEAH (Asp-Glu-Ala-His) box polypeptide 29	AK308332|DHX29|54505|DEAH (Asp-Glu-Ala-His) box polypeptide 29	NM_019030|DHX29|54505|DEAH (Asp-Glu-Ala-His) box polypeptide 29	BX649135|DHX29|54505|DEAH (Asp-Glu-Ala-His) box polypeptide 29
hg18_v1_chr7_-_127833231_127833275	0.00746713	SOX2.p2	AK054640|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1	AK293413|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1	AK297943|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1	NM_001142573|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1	NM_001142574|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1	NM_001142575|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1
hg18_v1_chr1_-_24179419_24179539	0.00745316	SOX2.p2	AK222994|SRSF10|10772|serine/arginine-rich splicing factor 10	AK296175|SRSF10|10772|serine/arginine-rich splicing factor 10	BC001107|SRSF10|10772|serine/arginine-rich splicing factor 10	NM_001191005|SRSF10|10772|serine/arginine-rich splicing factor 10	NM_001191006|SRSF10|10772|serine/arginine-rich splicing factor 10	NM_001191007|SRSF10|10772|serine/arginine-rich splicing factor 10	NM_001191009|SRSF10|10772|serine/arginine-rich splicing factor 10	NM_006625|SRSF10|10772|serine/arginine-rich splicing factor 10	NM_054016|SRSF10|10772|serine/arginine-rich splicing factor 10
hg18_v1_chr3_+_99288706_99288706	0.00743839	SOX2.p2	NM_054106|OR5AC2|81050|olfactory receptor, family 5, subfamily AC, member 2
hg18_v1_chrX_+_71318250_71318351	0.00741226	SOX2.p2	NM_001170747|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	NM_006223|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	BC093700|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	BC112281|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	AB009690|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	BC005234|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	BC070288|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	BC111394|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	BC104653|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	AK127605|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	AF143096|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)
hg18_v1_chr3_+_184648089_184648153	0.00740329	SOX2.p2	CR603855|LOC100505687|100505687|hypothetical LOC100505687	AK057000|LOC100505687|100505687|hypothetical LOC100505687
hg18_v1_chr20_+_11846536_11846579	0.00740042	SOX2.p2	AK316256|BTBD3|22903|BTB (POZ) domain containing 3	NM_014962|BTBD3|22903|BTB (POZ) domain containing 3	AB023169|BTBD3|22903|BTB (POZ) domain containing 3	BC109315|BTBD3|22903|BTB (POZ) domain containing 3	BC109316|BTBD3|22903|BTB (POZ) domain containing 3
hg18_v1_chr2_-_70166903_70166922	0.00739349	SOX2.p2	AK056822|LOC400960|400960|hypothetical LOC400960
hg18_v1_chr3_-_48931821_48931821	0.00736818	SOX2.p2	AK097724|C3orf71|646450|chromosome 3 open reading frame 71	NM_001123040|C3orf71|646450|chromosome 3 open reading frame 71
hg18_v1_chr12_-_11230809_11230809	0.00733138	SOX2.p2	BC131742|TAS2R42|353164|taste receptor, type 2, member 42	NM_181429|TAS2R42|353164|taste receptor, type 2, member 42
hg18_v1_chr4_-_84150885_84150986	0.00731714	SOX2.p2	BC109278|LIN54|132660|lin-54 homolog (C. elegans)	BC109277|LIN54|132660|lin-54 homolog (C. elegans)	BX537919|LIN54|132660|lin-54 homolog (C. elegans)	AK294256|LIN54|132660|lin-54 homolog (C. elegans)
hg18_v1_chr17_+_7427849_7427863	0.00730215	SOX2.p2	AF059752|MPDU1|9526|mannose-P-dolichol utilization defect 1	CR623337|MPDU1|9526|mannose-P-dolichol utilization defect 1
hg18_v1_chr21_+_16024157_16024235	0.00730087	SOX2.p2	AF170562|USP25|29761|ubiquitin specific peptidase 25	BC075792|USP25|29761|ubiquitin specific peptidase 25
hg18_v1_chr7_+_2565202_2565229	0.00728011	SOX2.p2	AK309646|IQCE|23288|IQ motif containing E	BC043150|IQCE|23288|IQ motif containing E
hg18_v1_chr19_-_4293718_4293782	0.00726546	SOX2.p2	AK125774|STAP2|55620|signal transducing adaptor family member 2
hg18_v1_chr7_-_83108682_83108682	0.00723136	SOX2.p2	AK303925|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E	NM_001178129|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E
hg18_v1_chr6_+_88356503_88356610	0.00722107	SOX2.p2	NM_001197259|ORC3|23595|origin recognition complex, subunit 3	NM_012381|ORC3|23595|origin recognition complex, subunit 3	NM_181837|ORC3|23595|origin recognition complex, subunit 3	CR619723|ORC3|23595|origin recognition complex, subunit 3	AF125507|ORC3|23595|origin recognition complex, subunit 3	AK316298|ORC3|23595|origin recognition complex, subunit 3	AL080116|ORC3|23595|origin recognition complex, subunit 3	AK222795|ORC3|23595|origin recognition complex, subunit 3	AK303056|ORC3|23595|origin recognition complex, subunit 3	AF093535|ORC3|23595|origin recognition complex, subunit 3	AK303195|ORC3|23595|origin recognition complex, subunit 3	AK302750|ORC3|23595|origin recognition complex, subunit 3	BC047689|ORC3|23595|origin recognition complex, subunit 3	BC035494|ORC3|23595|origin recognition complex, subunit 3	AK315911|ORC3|23595|origin recognition complex, subunit 3	AK303182|ORC3|23595|origin recognition complex, subunit 3	EU446990|ORC3|23595|origin recognition complex, subunit 3	EU831634|ORC3|23595|origin recognition complex, subunit 3	AF135044|ORC3|23595|origin recognition complex, subunit 3
hg18_v1_chr4_+_41234944_41234981	0.0071932	SOX2.p2	BC023546|LIMCH1|22998|LIM and calponin homology domains 1
hg18_v1_chr17_+_71772875_71772884	0.00714552	SOX2.p2	BC060859|FAM100B|283991|family with sequence similarity 100, member B	NM_182565|FAM100B|283991|family with sequence similarity 100, member B
hg18_v1_chr1_-_210654862_210654889	0.00713767	SOX2.p2	AK297200|TMEM206|55248|transmembrane protein 206	NM_001198862|TMEM206|55248|transmembrane protein 206	AK024066|TMEM206|55248|transmembrane protein 206	NM_018252|TMEM206|55248|transmembrane protein 206
hg18_v1_chr6_-_38778900_38778931	0.00710401	SOX2.p2	NM_006708|GLO1|2739|glyoxalase I
hg18_v1_chr11_+_118394703_118394717	0.00708479	SOX2.p2	CR599720|TRAPPC4|51399|trafficking protein particle complex 4
hg18_v1_chr2_+_84986510_84986652	0.0070828	SOX2.p2	M92381|TMSB10|9168|thymosin beta 10	EU831614|TMSB10|9168|thymosin beta 10	EU831701|TMSB10|9168|thymosin beta 10	EU832349|TMSB10|9168|thymosin beta 10	EU832434|TMSB10|9168|thymosin beta 10
hg18_v1_chr17_+_53515725_53515844	0.00707281	SOX2.p2	AK312125|DYNLL2|140735|dynein, light chain, LC8-type 2	NM_080677|DYNLL2|140735|dynein, light chain, LC8-type 2	BC010744|DYNLL2|140735|dynein, light chain, LC8-type 2
hg18_v1_chr19_+_11327061_11327170	0.00706973	SOX2.p2	NM_001170635|LPPR2|64748|lipid phosphate phosphatase-related protein type 2	NM_022737|LPPR2|64748|lipid phosphate phosphatase-related protein type 2	AK023117|LPPR2|64748|lipid phosphate phosphatase-related protein type 2	AY304516|LPPR2|64748|lipid phosphate phosphatase-related protein type 2	AK225482|LPPR2|64748|lipid phosphate phosphatase-related protein type 2
hg18_v1_chr9_-_122382079_122382270	0.00705558	SOX2.p2	BC136275|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	BC143732|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	BC143734|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	BC143753|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	BC143755|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	BC143760|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	BC143762|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	BC143764|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	AF448860|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	AB046853|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	BC146782|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	BC019577|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	BX537421|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	AL833481|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	BX537759|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	AK122913|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	BX537708|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	NM_001011649|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2	NM_018249|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2
hg18_v1_chr2_-_89223666_89223742	0.00705493	SOX2.p2	BC073793|IGKC|3514|immunoglobulin kappa constant	BC032451|IGK@|50802|immunoglobulin kappa locus	BC092453|IGKC|3514|immunoglobulin kappa constant	AK129807|IGK@|50802|immunoglobulin kappa locus	BC016380|IGK@|50802|immunoglobulin kappa locus	BC062704|IGK@|50802|immunoglobulin kappa locus
hg18_v1_chr1_+_157676135_157676172	0.00704974	SOX2.p2	BC112290|OR10J1|26476|olfactory receptor, family 10, subfamily J, member 1	BC112292|OR10J1|26476|olfactory receptor, family 10, subfamily J, member 1	NM_012351|OR10J1|26476|olfactory receptor, family 10, subfamily J, member 1	BC069150|OR10J1|26476|olfactory receptor, family 10, subfamily J, member 1
hg18_v1_chr6_+_42639714_42639742	0.00704128	SOX2.p2	NM_001184801|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2	NM_015255|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2
hg18_v1_chr14_-_63830830_63830880	0.00701943	SOX2.p2	AF051427|ESR2|2100|estrogen receptor 2 (ER beta)	AF051428|ESR2|2100|estrogen receptor 2 (ER beta)	AF060555|ESR2|2100|estrogen receptor 2 (ER beta)	NM_001040275|ESR2|2100|estrogen receptor 2 (ER beta)	NM_001437|ESR2|2100|estrogen receptor 2 (ER beta)
hg18_v1_chr1_+_25537372_25537471	0.00700725	SOX2.p2	CR596941|TMEM50A|23585|transmembrane protein 50A	AK311092|TMEM50A|23585|transmembrane protein 50A	AF087880|TMEM50A|23585|transmembrane protein 50A	AL136627|TMEM50A|23585|transmembrane protein 50A	NM_014313|TMEM50A|23585|transmembrane protein 50A	AK299180|TMEM50A|23585|transmembrane protein 50A	AK311355|TMEM50A|23585|transmembrane protein 50A	AK312588|TMEM50A|23585|transmembrane protein 50A	AY358650|TMEM50A|23585|transmembrane protein 50A	AY071927|TMEM50A|23585|transmembrane protein 50A	BC007341|TMEM50A|23585|transmembrane protein 50A	BC066908|TMEM50A|23585|transmembrane protein 50A	CR592818|TMEM50A|23585|transmembrane protein 50A	AF081282|TMEM50A|23585|transmembrane protein 50A
hg18_v1_chr6_-_47385313_47385382	0.00699721	SOX2.p2	AB209394|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg18_v1_chr15_-_68177280_68177282	0.00699033	SOX2.p2	BC015729|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	AK304459|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)
hg18_v1_chrX_+_99785818_99785959	0.00695558	SOX2.p2	NM_014467|SRPX2|27286|sushi-repeat containing protein, X-linked 2	AK075462|SRPX2|27286|sushi-repeat containing protein, X-linked 2	AF060567|SRPX2|27286|sushi-repeat containing protein, X-linked 2	AF393649|SRPX2|27286|sushi-repeat containing protein, X-linked 2
hg18_v1_chr15_-_41000100_41000345	0.00693725	SOX2.p2	CR615164|TTBK2|146057|tau tubulin kinase 2	AF525400|TTBK2|146057|tau tubulin kinase 2	CR611465|TTBK2|146057|tau tubulin kinase 2	AK131372|TTBK2|146057|tau tubulin kinase 2	BC041876|TTBK2|146057|tau tubulin kinase 2	NM_173500|TTBK2|146057|tau tubulin kinase 2	BC071556|TTBK2|146057|tau tubulin kinase 2
hg18_v1_chr10_-_27483315_27483337	0.00691527	SOX2.p2	AK297973|YME1L1|10730|YME1-like 1 (S. cerevisiae)	AJ132637|YME1L1|10730|YME1-like 1 (S. cerevisiae)	NM_014263|YME1L1|10730|YME1-like 1 (S. cerevisiae)	NM_139312|YME1L1|10730|YME1-like 1 (S. cerevisiae)
hg18_v1_chr8_+_92330691_92330722	0.00691348	SOX2.p2	AJ413229|SLC26A7|115111|solute carrier family 26, member 7	NM_052832|SLC26A7|115111|solute carrier family 26, member 7	NM_134266|SLC26A7|115111|solute carrier family 26, member 7	AF331521|SLC26A7|115111|solute carrier family 26, member 7	AJ413228|SLC26A7|115111|solute carrier family 26, member 7	AJ413230|SLC26A7|115111|solute carrier family 26, member 7
hg18_v1_chr2_-_128285136_128285211	0.00690862	SOX2.p2	BC108671|WDR33|55339|WD repeat domain 33	AB044749|WDR33|55339|WD repeat domain 33	AK002156|WDR33|55339|WD repeat domain 33	BC013990|WDR33|55339|WD repeat domain 33	BC068484|WDR33|55339|WD repeat domain 33	CR591938|WDR33|55339|WD repeat domain 33	AK223319|WDR33|55339|WD repeat domain 33
hg18_v1_chr1_-_152445432_152445522	0.00690256	SOX2.p2	NM_001010979|C1orf189|388701|chromosome 1 open reading frame 189	BC127710|C1orf189|388701|chromosome 1 open reading frame 189	BC130509|C1orf189|388701|chromosome 1 open reading frame 189
hg18_v1_chr4_-_120769590_120769631	0.00687368	SOX2.p2	
hg18_v1_chr13_+_52500830_52500996	0.00687214	SOX2.p2	AK000683|OLFM4|10562|olfactomedin 4	BC117329|OLFM4|10562|olfactomedin 4	AY358567|OLFM4|10562|olfactomedin 4	NM_006418|OLFM4|10562|olfactomedin 4	AF097021|OLFM4|10562|olfactomedin 4	AK300947|OLFM4|10562|olfactomedin 4
hg18_v1_chr7_-_8268292_8268341	0.00685355	SOX2.p2	U26592|ICA1|3382|islet cell autoantigen 1, 69kDa	AK292106|ICA1|3382|islet cell autoantigen 1, 69kDa	NM_001136020|ICA1|3382|islet cell autoantigen 1, 69kDa	CR605198|ICA1|3382|islet cell autoantigen 1, 69kDa	CR620744|ICA1|3382|islet cell autoantigen 1, 69kDa
hg18_v1_chr6_-_38778882_38778890	0.00684989	SOX2.p2	BC011365|GLO1|2739|glyoxalase I	CR596001|GLO1|2739|glyoxalase I
hg18_v1_chr6_+_126112431_126112488	0.00681809	SOX2.p2	AF173901|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2
hg18_v1_chr10_+_85889164_85889311	0.00680849	SOX2.p2	NM_014394|GHITM|27069|growth hormone inducible transmembrane protein	AK299937|GHITM|27069|growth hormone inducible transmembrane protein	AF078863|GHITM|27069|growth hormone inducible transmembrane protein	AF131820|GHITM|27069|growth hormone inducible transmembrane protein	AL136713|GHITM|27069|growth hormone inducible transmembrane protein	AF161400|GHITM|27069|growth hormone inducible transmembrane protein	AK130094|GHITM|27069|growth hormone inducible transmembrane protein	CR613304|GHITM|27069|growth hormone inducible transmembrane protein	CR618105|GHITM|27069|growth hormone inducible transmembrane protein	BC022872|GHITM|27069|growth hormone inducible transmembrane protein	AK225318|GHITM|27069|growth hormone inducible transmembrane protein	AF060923|GHITM|27069|growth hormone inducible transmembrane protein	AK098770|GHITM|27069|growth hormone inducible transmembrane protein	AK298332|GHITM|27069|growth hormone inducible transmembrane protein	BC010354|GHITM|27069|growth hormone inducible transmembrane protein	AK130097|GHITM|27069|growth hormone inducible transmembrane protein	AK297960|GHITM|27069|growth hormone inducible transmembrane protein	AK292864|GHITM|27069|growth hormone inducible transmembrane protein	AY358824|GHITM|27069|growth hormone inducible transmembrane protein	CR607970|GHITM|27069|growth hormone inducible transmembrane protein
hg18_v1_chr3_+_120347686_120347687	0.00680547	SOX2.p2	AK057421|C3orf30|152405|chromosome 3 open reading frame 30	NM_152539|C3orf30|152405|chromosome 3 open reading frame 30	BC130475|C3orf30|152405|chromosome 3 open reading frame 30	BC144197|C3orf30|152405|chromosome 3 open reading frame 30
hg18_v1_chr15_-_32446537_32447207	0.00678767	SOX2.p2	AF529233|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	BC144236|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	CR617279|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	AK290273|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	AK308910|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	AL832237|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	BC092463|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	NM_153613|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	BC048430|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	AY734233|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	AF542964|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4
hg18_v1_chr11_-_82675024_82675082	0.00678397	SOX2.p2	AF271782|CCDC90B|60492|coiled-coil domain containing 90B	NM_021825|CCDC90B|60492|coiled-coil domain containing 90B	BC048795|CCDC90B|60492|coiled-coil domain containing 90B	AK304769|CCDC90B|60492|coiled-coil domain containing 90B	AK315787|CCDC90B|60492|coiled-coil domain containing 90B	BC107755|CCDC90B|60492|coiled-coil domain containing 90B
hg18_v1_chr19_-_57930102_57930118	0.00675395	SOX2.p2	BC028590|ZNF611|81856|zinc finger protein 611	AK091389|ZNF611|81856|zinc finger protein 611	NM_001161501|ZNF611|81856|zinc finger protein 611	NM_001161499|ZNF611|81856|zinc finger protein 611	NM_001161500|ZNF611|81856|zinc finger protein 611
hg18_v1_chr12_+_22090485_22090506	0.00674347	SOX2.p2	CR625607|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase	AF271388|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase	CR622845|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase	CR614682|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase	AF397212|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase
hg18_v1_chrX_+_48219344_48219638	0.00672375	SOX2.p2	AK024023|FTSJ1|24140|FtsJ homolog 1 (E. coli)	NM_012280|FTSJ1|24140|FtsJ homolog 1 (E. coli)	NM_177439|FTSJ1|24140|FtsJ homolog 1 (E. coli)	AJ005892|FTSJ1|24140|FtsJ homolog 1 (E. coli)	AK297486|FTSJ1|24140|FtsJ homolog 1 (E. coli)	CR595767|FTSJ1|24140|FtsJ homolog 1 (E. coli)	CR595180|FTSJ1|24140|FtsJ homolog 1 (E. coli)	CR600255|FTSJ1|24140|FtsJ homolog 1 (E. coli)	CR616099|FTSJ1|24140|FtsJ homolog 1 (E. coli)	CR590233|FTSJ1|24140|FtsJ homolog 1 (E. coli)	CR613129|FTSJ1|24140|FtsJ homolog 1 (E. coli)	CR616867|FTSJ1|24140|FtsJ homolog 1 (E. coli)	CR606907|FTSJ1|24140|FtsJ homolog 1 (E. coli)	AK315138|FTSJ1|24140|FtsJ homolog 1 (E. coli)	CR609653|FTSJ1|24140|FtsJ homolog 1 (E. coli)	BC021047|FTSJ1|24140|FtsJ homolog 1 (E. coli)	BC023584|FTSJ1|24140|FtsJ homolog 1 (E. coli)
hg18_v1_chr18_-_71050034_71050166	0.00667219	SOX2.p2	AK292880|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2	BC078661|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2	BC033780|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2
hg18_v1_chr1_-_157003095_157003115	0.00666087	SOX2.p2	NM_001005185|OR6N1|128372|olfactory receptor, family 6, subfamily N, member 1	BC146847|OR6N1|128372|olfactory receptor, family 6, subfamily N, member 1
hg18_v1_chr5_+_70232245_70232433	0.00664612	SOX2.p2	NM_021967|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	NM_022968|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC021174|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	NM_001178087|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	NM_022978|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	AF073519|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	AF073518|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC035932|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	CR626737|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC093880|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC171749|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC101970|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC103687|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC104738|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC143260|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC093882|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC143255|SERF1B|728492|small EDRK-rich factor 1B (centromeric)
hg18_v1_chr1_+_12757570_12757570	0.00663608	SOX2.p2	NM_001080830|PRAMEF12|390999|PRAME family member 12
hg18_v1_chr12_+_48765300_48765461	0.00662804	SOX2.p2	AK292700|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	AK293932|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	AK130517|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	EU447009|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	BC000063|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	AF109733|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
hg18_v1_chr1_+_153374900_153374966	0.0065763	SOX2.p2	AK289551|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1	NM_001122837|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1	NM_001122839|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1	NM_018845|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1	AF126023|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1	BC009621|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1	AF126024|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1	BC012378|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1
hg18_v1_chr1_-_91259601_91259625	0.00655122	SOX2.p2	BC050656|ZNF644|84146|zinc finger protein 644	AK024026|ZNF644|84146|zinc finger protein 644	NM_016620|ZNF644|84146|zinc finger protein 644
hg18_v1_chr3_+_134976965_134976967	0.00651882	SOX2.p2	U88581|TF|7018|transferrin
hg18_v1_chr1_+_218334041_218334110	0.00650413	SOX2.p2	AY267462|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial	NM_018060|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial	BC137438|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial
hg18_v1_chr5_+_177415181_177415187	0.00650188	SOX2.p2	
hg18_v1_chr7_-_100325209_100325274	0.00650058	SOX2.p2	BC017456|UFSP1|402682|UFM1-specific peptidase 1 (non-functional)	BC067904|UFSP1|402682|UFM1-specific peptidase 1 (non-functional)	AK292467|UFSP1|402682|UFM1-specific peptidase 1 (non-functional)	NM_001015072|UFSP1|402682|UFM1-specific peptidase 1 (non-functional)
hg18_v1_chr1_+_53253161_53253201	0.00649686	SOX2.p2	M55421|SCP2|6342|sterol carrier protein 2	NM_001007099|SCP2|6342|sterol carrier protein 2	NM_001007100|SCP2|6342|sterol carrier protein 2	NM_001007250|SCP2|6342|sterol carrier protein 2	S52450|SCP2|6342|sterol carrier protein 2
hg18_v1_chr4_-_111339201_111339268	0.00649315	SOX2.p2	BC001305|ELOVL6|79071|ELOVL family member 6, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)	AK027031|ELOVL6|79071|ELOVL family member 6, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)	NM_001130721|ELOVL6|79071|ELOVL family member 6, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)	NM_024090|ELOVL6|79071|ELOVL family member 6, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)
hg18_v1_chr6_+_37245860_37246341	0.00649165	SOX2.p2	NM_002648|PIM1|5292|pim-1 oncogene	M54915|PIM1|5292|pim-1 oncogene	BC020224|PIM1|5292|pim-1 oncogene	CR591847|PIM1|5292|pim-1 oncogene	M24779|PIM1|5292|pim-1 oncogene	M16750|PIM1|5292|pim-1 oncogene	AK301158|PIM1|5292|pim-1 oncogene
hg18_v1_chr8_+_80685931_80685985	0.00647148	SOX2.p2	AK292737|STMN2|11075|stathmin-like 2	CR619618|STMN2|11075|stathmin-like 2	CR623788|STMN2|11075|stathmin-like 2	BC006302|STMN2|11075|stathmin-like 2	NM_007029|STMN2|11075|stathmin-like 2	CR606122|STMN2|11075|stathmin-like 2	CR614957|STMN2|11075|stathmin-like 2	CR618733|STMN2|11075|stathmin-like 2	CR621424|STMN2|11075|stathmin-like 2	CR607233|STMN2|11075|stathmin-like 2	CR616668|STMN2|11075|stathmin-like 2	CR602351|STMN2|11075|stathmin-like 2	CR618208|STMN2|11075|stathmin-like 2	CR593049|STMN2|11075|stathmin-like 2	CR612959|STMN2|11075|stathmin-like 2	CR605650|STMN2|11075|stathmin-like 2	S82024|STMN2|11075|stathmin-like 2	CR599871|STMN2|11075|stathmin-like 2	CR598266|STMN2|11075|stathmin-like 2	CR608911|STMN2|11075|stathmin-like 2	BT020034|STMN2|11075|stathmin-like 2	CR456833|STMN2|11075|stathmin-like 2	DQ892719|STMN2|11075|stathmin-like 2	DQ895968|STMN2|11075|stathmin-like 2
hg18_v1_chr16_-_3008162_3008188	0.00647023	SOX2.p2	BC008934|CLDN6|9074|claudin 6	AK075329|CLDN6|9074|claudin 6	CR614114|CLDN6|9074|claudin 6	NM_021195|CLDN6|9074|claudin 6
hg18_v1_chr1_+_112740380_112740403	0.00646408	SOX2.p2	BC016029|CTTNBP2NL|55917|CTTNBP2 N-terminal like	AK022544|CTTNBP2NL|55917|CTTNBP2 N-terminal like	AK092791|LOC100129406|100129406|hypothetical protein LOC100129406
hg18_v1_chr12_-_55990512_55990512	0.00642636	SOX2.p2	NM_014925|R3HDM2|22864|R3H domain containing 2
hg18_v1_chr4_-_113777569_113777599	0.00641019	SOX2.p2	AK302613|C4orf21|55345|chromosome 4 open reading frame 21	AK299831|C4orf21|55345|chromosome 4 open reading frame 21	NM_018392|C4orf21|55345|chromosome 4 open reading frame 21
hg18_v1_chr3_+_10043123_10043129	0.00638766	SOX2.p2	AF230336|FANCD2|2177|Fanconi anemia, complementation group D2	AF340183|FANCD2|2177|Fanconi anemia, complementation group D2
hg18_v1_chr6_-_89730066_89730066	0.00637846	SOX2.p2	NM_003800|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase
hg18_v1_chr4_-_147662318_147662574	0.0063702	SOX2.p2	AM392861|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	BC146684|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	DQ122860|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	DQ122861|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	DQ871036|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	EU831657|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	EU831663|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	EU831740|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	EU831744|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	CR936751|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	BC120970|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	BC120971|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	BC127626|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	BC127627|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	BC148252|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	AK291046|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	BC063471|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	AL136728|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	BC023288|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	AY346324|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	BC150308|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	CR933647|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	NM_001029998|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	NM_032128|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7
hg18_v1_chrX_-_37916138_37916147	0.00636066	SOX2.p2	CR622289|SRPX|8406|sushi-repeat containing protein, X-linked
hg18_v1_chr9_+_109086154_109086220	0.00635508	SOX2.p2	AY313777|RAD23B|5887|RAD23 homolog B (S. cerevisiae)
hg18_v1_chr9_-_137938778_137939187	0.00634186	SOX2.p2	NM_015447|CAMSAP1|157922|calmodulin regulated spectrin-associated protein 1
hg18_v1_chr4_+_88075176_88075303	0.00633083	SOX2.p2	AK296149|AFF1|4299|AF4/FMR2 family, member 1	NM_001166693|AFF1|4299|AF4/FMR2 family, member 1	AK300364|AFF1|4299|AF4/FMR2 family, member 1	BC017432|AFF1|4299|AF4/FMR2 family, member 1
hg18_v1_chr9_-_138454095_138454169	0.00632556	SOX2.p2	BC110356|INPP5E|56623|inositol polyphosphate-5-phosphatase, 72 kDa
hg18_v1_chr10_+_29006530_29006554	0.00631809	SOX2.p2	CR592969|BAMBI|25805|BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)	CR616386|BAMBI|25805|BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)	CR598096|BAMBI|25805|BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)
hg18_v1_chr2_+_114363919_114364115	0.00631343	SOX2.p2	BC044590|ACTR3|10096|ARP3 actin-related protein 3 homolog (yeast)	NM_005721|ACTR3|10096|ARP3 actin-related protein 3 homolog (yeast)	AF127773|ACTR3|10096|ARP3 actin-related protein 3 homolog (yeast)
hg18_v1_chr12_-_109390390_109390436	0.00631335	SOX2.p2	AM992619|GPN3|51184|GPN-loop GTPase 3	AM992620|GPN3|51184|GPN-loop GTPase 3	AY364262|GPN3|51184|GPN-loop GTPase 3	AM393009|GPN3|51184|GPN-loop GTPase 3	AM393821|GPN3|51184|GPN-loop GTPase 3	AF117229|GPN3|51184|GPN-loop GTPase 3
hg18_v1_chr5_-_150118747_150118849	0.00629506	SOX2.p2	DQ892339|DCTN4|51164|dynactin 4 (p62)	DQ895544|DCTN4|51164|dynactin 4 (p62)	AF195120|DCTN4|51164|dynactin 4 (p62)	AK000299|DCTN4|51164|dynactin 4 (p62)	AK296787|DCTN4|51164|dynactin 4 (p62)	BC026323|DCTN4|51164|dynactin 4 (p62)	AK311693|DCTN4|51164|dynactin 4 (p62)	AK307757|DCTN4|51164|dynactin 4 (p62)	NM_001135643|DCTN4|51164|dynactin 4 (p62)	NM_016221|DCTN4|51164|dynactin 4 (p62)
hg18_v1_chr1_+_86943074_86943100	0.00629175	SOX2.p2	AF350371|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1
hg18_v1_chr10_-_27483285_27483310	0.00628622	SOX2.p2	BC007795|YME1L1|10730|YME1-like 1 (S. cerevisiae)	BC023507|YME1L1|10730|YME1-like 1 (S. cerevisiae)	BC024032|YME1L1|10730|YME1-like 1 (S. cerevisiae)
hg18_v1_chr19_-_14501048_14501121	0.00628589	SOX2.p2	AK301817|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1
hg18_v1_chr3_-_45242624_45242801	0.00626067	SOX2.p2	AB078417|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)	AF438313|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)	BC057390|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)	CR593631|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)	CR615050|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)	CR591255|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)	CR621614|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)
hg18_v1_chr1_+_202031445_202031458	0.00620916	SOX2.p2	BC014268|ZC3H11A|9877|zinc finger CCCH-type containing 11A	BC038513|ZC3H11A|9877|zinc finger CCCH-type containing 11A
hg18_v1_chr12_+_74014685_74014774	0.0062066	SOX2.p2	AY358731|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1	BC014603|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1	NM_152779|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1	DQ894020|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1	EU176187|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1
hg18_v1_chr9_-_94095734_94095785	0.00616344	SOX2.p2	AB209234|IARS|3376|isoleucyl-tRNA synthetase	D28473|IARS|3376|isoleucyl-tRNA synthetase	AK293014|IARS|3376|isoleucyl-tRNA synthetase
hg18_v1_chr10_+_104603956_104604026	0.00615338	SOX2.p2	NM_001136200|C10orf32|119032|chromosome 10 open reading frame 32	NM_144591|C10orf32|119032|chromosome 10 open reading frame 32	AL832477|C10orf32|119032|chromosome 10 open reading frame 32	AK098071|C10orf32|119032|chromosome 10 open reading frame 32	BC015994|C10orf32|119032|chromosome 10 open reading frame 32	BC040069|C10orf32-AS3MT|100528007|C10orf32-AS3MT read-through transcript	AK311742|C10orf32|119032|chromosome 10 open reading frame 32
hg18_v1_chr19_+_977582_977598	0.00615256	SOX2.p2	AK295271|CNN2|1265|calponin 2	CR603928|CNN2|1265|calponin 2
hg18_v1_chr19_+_40831073_40831112	0.00613908	SOX2.p2	CR600969|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)	D28426|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)	BC002478|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)	X54473|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)	X13923|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)
hg18_v1_chr19_-_12853140_12853234	0.00613389	SOX2.p2	FJ752529|DNASE2|1777|deoxyribonuclease II, lysosomal	BT007047|DNASE2|1777|deoxyribonuclease II, lysosomal	BC010419|DNASE2|1777|deoxyribonuclease II, lysosomal	CR616269|DNASE2|1777|deoxyribonuclease II, lysosomal	CR612006|DNASE2|1777|deoxyribonuclease II, lysosomal
hg18_v1_chr19_+_54884252_54884373	0.00611714	SOX2.p2	AL359598|C19orf76|199800|chromosome 19 open reading frame 76
hg18_v1_chr4_-_88531245_88531346	0.00610951	SOX2.p2	CR590939|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11	AF273056|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11	AY358553|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11	CR603100|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11	CR607201|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11	BC014327|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11	BC021673|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11
hg18_v1_chr3_+_110611526_110611526	0.00609539	SOX2.p2	AK058092|FLJ25363|401082|hypothetical LOC401082	NM_001145553|FLJ25363|401082|hypothetical LOC401082
hg18_v1_chr19_-_45416112_45416145	0.00607799	SOX2.p2	CR610812|TTC9B|148014|tetratricopeptide repeat domain 9B	CR626768|TTC9B|148014|tetratricopeptide repeat domain 9B	AK054935|TTC9B|148014|tetratricopeptide repeat domain 9B	AK289550|TTC9B|148014|tetratricopeptide repeat domain 9B	BC029539|TTC9B|148014|tetratricopeptide repeat domain 9B	CR596147|TTC9B|148014|tetratricopeptide repeat domain 9B	NM_152479|TTC9B|148014|tetratricopeptide repeat domain 9B
hg18_v1_chr4_-_54625528_54625581	0.00606017	SOX2.p2	AK312427|CHIC2|26511|cysteine-rich hydrophobic domain 2	NM_012110|CHIC2|26511|cysteine-rich hydrophobic domain 2	CR611915|CHIC2|26511|cysteine-rich hydrophobic domain 2
hg18_v1_chr5_-_60493903_60493967	0.0060588	SOX2.p2	BC146876|C5orf43|643155|chromosome 5 open reading frame 43	BC146881|C5orf43|643155|chromosome 5 open reading frame 43	BC014242|C5orf43|643155|chromosome 5 open reading frame 43	BC047489|C5orf43|643155|chromosome 5 open reading frame 43
hg18_v1_chrX_-_74659810_74659877	0.00605687	SOX2.p2	AK122885|ZDHHC15|158866|zinc finger, DHHC-type containing 15
hg18_v1_chr9_+_133259330_133259444	0.00603451	SOX2.p2	BC002872|PRRC2B|84726|proline-rich coiled-coil 2B
hg18_v1_chr3_-_48344834_48344834	0.00602089	SOX2.p2	NM_001080525|SPINK8|646424|serine peptidase inhibitor, Kazal type 8 (putative)
hg18_v1_chr2_+_176672775_176672775	0.00600741	SOX2.p2	BC069088|HOXD12|3238|homeobox D12	BC121103|HOXD12|3238|homeobox D12	BC121104|HOXD12|3238|homeobox D12	NM_021193|HOXD12|3238|homeobox D12
hg18_v1_chr1_-_153445592_153445610	0.00599613	SOX2.p2	AK311031|THBS3|7059|thrombospondin 3
hg18_v1_chr9_+_81377419_81377592	0.00599334	SOX2.p2	AB033087|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)	AK302709|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)	AK296342|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)
hg18_v1_chr6_-_88468667_88468668	0.00598448	SOX2.p2	AK222701|AKIRIN2|55122|akirin 2
hg18_v1_chr22_+_18485076_18485093	0.00597302	SOX2.p2	AK293502|RANBP1|5902|RAN binding protein 1	BC071998|RANBP1|5902|RAN binding protein 1
hg18_v1_chr10_-_43212166_43212284	0.00596679	SOX2.p2	NM_001098208|HNRNPF|3185|heterogeneous nuclear ribonucleoprotein F
hg18_v1_chr14_+_38719462_38719593	0.00595527	SOX2.p2	AK304622|PNN|5411|pinin, desmosome associated protein
hg18_v1_chr9_-_115142354_115142440	0.00595161	SOX2.p2	AK074891|WDR31|114987|WD repeat domain 31	AL833635|WDR31|114987|WD repeat domain 31	BC022982|WDR31|114987|WD repeat domain 31	AK093240|WDR31|114987|WD repeat domain 31	BC012352|WDR31|114987|WD repeat domain 31	AK313843|WDR31|114987|WD repeat domain 31	NM_001012361|WDR31|114987|WD repeat domain 31	NM_145241|WDR31|114987|WD repeat domain 31
hg18_v1_chrX_+_133334965_133335121	0.00594774	SOX2.p2	AY157622|PHF6|84295|PHD finger protein 6	NM_001015877|PHF6|84295|PHD finger protein 6	NM_032335|PHF6|84295|PHD finger protein 6	NM_032458|PHF6|84295|PHD finger protein 6	AL832725|PHF6|84295|PHD finger protein 6	AK290095|PHF6|84295|PHD finger protein 6	AK303369|PHF6|84295|PHD finger protein 6	BC005994|PHF6|84295|PHD finger protein 6	AB058726|PHF6|84295|PHD finger protein 6
hg18_v1_chr3_-_129023850_129024390	0.00594141	SOX2.p2	CR456835|MGLL|11343|monoglyceride lipase	AK304844|MGLL|11343|monoglyceride lipase	BC000551|MGLL|11343|monoglyceride lipase	U67963|MGLL|11343|monoglyceride lipase	CR622559|MGLL|11343|monoglyceride lipase	AK315529|MGLL|11343|monoglyceride lipase	BC006230|MGLL|11343|monoglyceride lipase	NM_007283|MGLL|11343|monoglyceride lipase
hg18_v1_chr15_+_40628283_40628359	0.00594065	SOX2.p2	NM_001130447|HAUS2|55142|HAUS augmin-like complex, subunit 2	NM_018097|HAUS2|55142|HAUS augmin-like complex, subunit 2	AK022939|HAUS2|55142|HAUS augmin-like complex, subunit 2	BC010903|HAUS2|55142|HAUS augmin-like complex, subunit 2	AK001322|HAUS2|55142|HAUS augmin-like complex, subunit 2
hg18_v1_chr6_-_38778893_38778897	0.00591497	SOX2.p2	AK293345|GLO1|2739|glyoxalase I	D13315|GLO1|2739|glyoxalase I
hg18_v1_chr6_-_39390073_39390214	0.00590402	SOX2.p2	AF358910|KCNK17|89822|potassium channel, subfamily K, member 17	DQ891712|KCNK17|89822|potassium channel, subfamily K, member 17	DQ894889|KCNK17|89822|potassium channel, subfamily K, member 17	EU978944|KCNK17|89822|potassium channel, subfamily K, member 17	CR622971|KCNK17|89822|potassium channel, subfamily K, member 17	BC025726|KCNK17|89822|potassium channel, subfamily K, member 17	AY358853|KCNK17|89822|potassium channel, subfamily K, member 17	CR626629|KCNK17|89822|potassium channel, subfamily K, member 17	AF339912|KCNK17|89822|potassium channel, subfamily K, member 17	AK310582|KCNK17|89822|potassium channel, subfamily K, member 17	AK315273|KCNK17|89822|potassium channel, subfamily K, member 17	NM_031460|KCNK17|89822|potassium channel, subfamily K, member 17	CR613884|KCNK17|89822|potassium channel, subfamily K, member 17	NM_001135111|KCNK17|89822|potassium channel, subfamily K, member 17
hg18_v1_chr1_-_171286634_171286725	0.00590123	SOX2.p2	AF117713|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18	AF125303|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18	BC069111|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18	BC069319|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18	AY358868|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18	AK313273|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18	BC093986|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18	BC112032|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18	NM_005092|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18
hg18_v1_chr16_-_52295214_52295303	0.00586677	SOX2.p2	BC136433|RPGRIP1L|23322|RPGRIP1-like	AK096333|RPGRIP1L|23322|RPGRIP1-like	AK308390|RPGRIP1L|23322|RPGRIP1-like	BC017977|RPGRIP1L|23322|RPGRIP1-like	CR749645|RPGRIP1L|23322|RPGRIP1-like	AK307929|RPGRIP1L|23322|RPGRIP1-like	EF565106|RPGRIP1L|23322|RPGRIP1-like	NM_001127897|RPGRIP1L|23322|RPGRIP1-like	NM_015272|RPGRIP1L|23322|RPGRIP1-like	AK304790|RPGRIP1L|23322|RPGRIP1-like
hg18_v1_chr4_-_149582948_149583121	0.00586448	SOX2.p2	AJ315514|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2	M16801|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2	AK304318|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2	NM_000901|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2	NM_001166104|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2
hg18_v1_chr11_+_61032847_61032847	0.00586146	SOX2.p2	NM_001145077|LRRC10B|390205|leucine rich repeat containing 10B
hg18_v1_chr11_+_125208420_125208420	0.00586013	SOX2.p2	AK123042|PATE4|399968|prostate and testis expressed 4	AK311509|PATE4|399968|prostate and testis expressed 4	NM_001144874|PATE4|399968|prostate and testis expressed 4
hg18_v1_chr17_-_5312904_5312930	0.00585516	SOX2.p2	AK025625|DHX33|56919|DEAH (Asp-Glu-Ala-His) box polypeptide 33	NM_020162|DHX33|56919|DEAH (Asp-Glu-Ala-His) box polypeptide 33
hg18_v1_chr1_-_29348252_29348308	0.00583963	SOX2.p2	CR594929|SRSF4|6429|serine/arginine-rich splicing factor 4
hg18_v1_chr1_+_224064427_224064474	0.00583734	SOX2.p2	CR593306|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)	BC095430|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)	CR612904|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)	CR625608|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)	BC003567|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)	BC008291|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)
hg18_v1_chr4_-_149577404_149577461	0.00583023	SOX2.p2	
hg18_v1_chr11_-_77026406_77026519	0.00578819	SOX2.p2	AF026003|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	BT019907|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	AF005422|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	CR604322|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	BC119634|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	BC119635|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	CR605039|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	CR617856|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	U53454|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	AK315259|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	X91788|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	NM_001293|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A
hg18_v1_chr19_+_9799587_9799639	0.00578229	SOX2.p2	AK309258|UBL5|59286|ubiquitin-like 5	CR590001|UBL5|59286|ubiquitin-like 5	CR593093|UBL5|59286|ubiquitin-like 5	AF313915|UBL5|59286|ubiquitin-like 5	BC007053|UBL5|59286|ubiquitin-like 5	CR606232|UBL5|59286|ubiquitin-like 5	BC110839|UBL5|59286|ubiquitin-like 5
hg18_v1_chr6_+_125516499_125516778	0.00576265	SOX2.p2	NM_001003396|TPD52L1|7164|tumor protein D52-like 1	NM_001003397|TPD52L1|7164|tumor protein D52-like 1	NM_003287|TPD52L1|7164|tumor protein D52-like 1	AK291866|TPD52L1|7164|tumor protein D52-like 1	U44427|TPD52L1|7164|tumor protein D52-like 1	BC002375|TPD52L1|7164|tumor protein D52-like 1	AK291872|TPD52L1|7164|tumor protein D52-like 1	AF208012|TPD52L1|7164|tumor protein D52-like 1	AK291887|TPD52L1|7164|tumor protein D52-like 1
hg18_v1_chr19_+_45774620_45774622	0.0057473	SOX2.p2	CR590661|SHKBP1|92799|SH3KBP1 binding protein 1
hg18_v1_chr4_-_39655944_39656032	0.00574006	SOX2.p2	BC041361|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)	NM_001100399|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)	NM_001100400|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)
hg18_v1_chr6_-_38778860_38778880	0.005734	SOX2.p2	AK129573|GLO1|2739|glyoxalase I	L07837|GLO1|2739|glyoxalase I	BC001741|GLO1|2739|glyoxalase I	CR617753|GLO1|2739|glyoxalase I	CR623176|GLO1|2739|glyoxalase I	CR603414|GLO1|2739|glyoxalase I	AL833442|GLO1|2739|glyoxalase I	CR619737|GLO1|2739|glyoxalase I
hg18_v1_chr3_+_173240126_173240131	0.00570192	SOX2.p2	AK127826|FNDC3B|64778|fibronectin type III domain containing 3B
hg18_v1_chr1_-_144322271_144322287	0.00569371	SOX2.p2	CR608817|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)
hg18_v1_chr17_-_7996409_7996482	0.00568869	SOX2.p2	AB088477|PER1|5187|period homolog 1 (Drosophila)	AF022991|PER1|5187|period homolog 1 (Drosophila)	AK291061|PER1|5187|period homolog 1 (Drosophila)	NM_002616|PER1|5187|period homolog 1 (Drosophila)
hg18_v1_chr14_-_104333060_104333120	0.00566559	SOX2.p2	BC000479|AKT1|207|v-akt murine thymoma viral oncogene homolog 1	BC084538|AKT1|207|v-akt murine thymoma viral oncogene homolog 1
hg18_v1_chr6_-_38778898_38778899	0.00564873	SOX2.p2	AK312662|GLO1|2739|glyoxalase I
hg18_v1_chr12_-_11313907_11313907	0.00564476	SOX2.p2	BC096209|PRB3|5544|proline-rich protein BstNI subfamily 3	BC096210|PRB3|5544|proline-rich protein BstNI subfamily 3	BC096211|PRB3|5544|proline-rich protein BstNI subfamily 3	BC096212|PRB3|5544|proline-rich protein BstNI subfamily 3	NM_006249|PRB3|5544|proline-rich protein BstNI subfamily 3
hg18_v1_chr8_+_133856738_133856792	0.00563913	SOX2.p2	NM_016018|PHF20L1|51105|PHD finger protein 20-like 1	NM_032205|PHF20L1|51105|PHD finger protein 20-like 1	NM_198513|PHF20L1|51105|PHD finger protein 20-like 1
hg18_v1_chr1_+_12900031_12900099	0.00562808	SOX2.p2	BC144565|PRAMEF7|441871|PRAME family member 7	NM_001012277|PRAMEF7|441871|PRAME family member 7
hg18_v1_chr20_-_23755297_23755367	0.00562517	SOX2.p2	NM_001322|CST2|1470|cystatin SA	BC062679|CST2|1470|cystatin SA
hg18_v1_chr16_-_87878249_87878666	0.00562163	SOX2.p2	BC041585|ANKRD11|29123|ankyrin repeat domain 11
hg18_v1_chr16_+_79626817_79627211	0.00559495	SOX2.p2	CR624345|ATMIN|23300|ATM interactor	NM_015251|ATMIN|23300|ATM interactor	BC002701|ATMIN|23300|ATM interactor	AK290943|ATMIN|23300|ATM interactor
hg18_v1_chr17_+_44429748_44429911	0.00559304	SOX2.p2	NM_001160423|IGF2BP1|10642|insulin-like growth factor 2 mRNA binding protein 1	NM_006546|IGF2BP1|10642|insulin-like growth factor 2 mRNA binding protein 1	AF198254|IGF2BP1|10642|insulin-like growth factor 2 mRNA binding protein 1	AK313229|IGF2BP1|10642|insulin-like growth factor 2 mRNA binding protein 1
hg18_v1_chr1_+_246290586_246290606	0.00558311	SOX2.p2	BC137039|OR2L3|391192|olfactory receptor, family 2, subfamily L, member 3	BC137040|OR2L3|391192|olfactory receptor, family 2, subfamily L, member 3	NM_001004687|OR2L3|391192|olfactory receptor, family 2, subfamily L, member 3
hg18_v1_chr19_-_11477395_11477659	0.00556288	SOX2.p2	AY072704|ZNF653|115950|zinc finger protein 653	BC014187|ZNF653|115950|zinc finger protein 653	AK314986|ZNF653|115950|zinc finger protein 653	BC016816|ZNF653|115950|zinc finger protein 653
hg18_v1_chr4_+_48038095_48038242	0.00556244	SOX2.p2	BC040993|SLAIN2|57606|SLAIN motif family, member 2	AK291006|SLAIN2|57606|SLAIN motif family, member 2
hg18_v1_chrX_+_122821217_122822029	0.00553136	SOX2.p2	AK313883|XIAP|331|X-linked inhibitor of apoptosis	AK309704|XIAP|331|X-linked inhibitor of apoptosis	NM_001167|XIAP|331|X-linked inhibitor of apoptosis	U32974|XIAP|331|X-linked inhibitor of apoptosis	BC032729|XIAP|331|X-linked inhibitor of apoptosis
hg18_v1_chr6_+_3204133_3204182	0.0055264	SOX2.p2	NM_001128591|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4	NM_001128592|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4	NM_001135750|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4
hg18_v1_chr17_+_39280041_39280110	0.0054986	SOX2.p2	AK298112|CD300LG|146894|CD300 molecule-like family member g	AK309938|CD300LG|146894|CD300 molecule-like family member g	NM_001168322|CD300LG|146894|CD300 molecule-like family member g	NM_001168323|CD300LG|146894|CD300 molecule-like family member g	NM_001168324|CD300LG|146894|CD300 molecule-like family member g	NM_145273|CD300LG|146894|CD300 molecule-like family member g	AF427619|CD300LG|146894|CD300 molecule-like family member g	AF427620|CD300LG|146894|CD300 molecule-like family member g	BC025395|CD300LG|146894|CD300 molecule-like family member g	AY358364|CD300LG|146894|CD300 molecule-like family member g
hg18_v1_chr8_-_33577033_33577042	0.00549403	SOX2.p2	AB158288|DUSP26|78986|dual specificity phosphatase 26 (putative)	AK055704|DUSP26|78986|dual specificity phosphatase 26 (putative)
hg18_v1_chr3_+_150028130_150028300	0.00548389	SOX2.p2	CR623808|CPB1|1360|carboxypeptidase B1 (tissue)	NM_001871|CPB1|1360|carboxypeptidase B1 (tissue)	M81057|CPB1|1360|carboxypeptidase B1 (tissue)	AK313940|CPB1|1360|carboxypeptidase B1 (tissue)	AJ224866|CPB1|1360|carboxypeptidase B1 (tissue)	BC015338|CPB1|1360|carboxypeptidase B1 (tissue)	DQ890547|CPB1|1360|carboxypeptidase B1 (tissue)	DQ893706|CPB1|1360|carboxypeptidase B1 (tissue)	BT009910|CPB1|1360|carboxypeptidase B1 (tissue)
hg18_v1_chrX_-_48743561_48743624	0.00547428	SOX2.p2	AB032993|GRIPAP1|56850|GRIP1 associated protein 1	AK292158|GRIPAP1|56850|GRIP1 associated protein 1	BC101544|GRIPAP1|56850|GRIP1 associated protein 1	BC101546|GRIPAP1|56850|GRIP1 associated protein 1	BX647801|GRIPAP1|56850|GRIP1 associated protein 1	BX647804|GRIPAP1|56850|GRIP1 associated protein 1	NM_020137|GRIPAP1|56850|GRIP1 associated protein 1	NM_207672|GRIPAP1|56850|GRIP1 associated protein 1
hg18_v1_chr12_+_22669352_22669477	0.00547377	SOX2.p2	BC006111|ETNK1|55500|ethanolamine kinase 1	AL137750|ETNK1|55500|ethanolamine kinase 1	AK074425|ETNK1|55500|ethanolamine kinase 1
hg18_v1_chr1_-_144322291_144322294	0.00542672	SOX2.p2	BC004424|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)
hg18_v1_chr1_-_17637639_17637658	0.00533841	SOX2.p2	BC053908|RCC2|55920|regulator of chromosome condensation 2	NM_001136204|RCC2|55920|regulator of chromosome condensation 2
hg18_v1_chr1_+_112740378_112740378	0.00532826	SOX2.p2	
hg18_v1_chr1_-_201097253_201097358	0.00532203	SOX2.p2	
hg18_v1_chr4_-_103484841_103484942	0.00530902	SOX2.p2	DQ892212|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8	DQ895407|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8
hg18_v1_chr1_-_117465872_117465936	0.00527547	SOX2.p2	AK023243|TRIM45|80263|tripartite motif containing 45	AK222901|TRIM45|80263|tripartite motif containing 45	CR595070|TRIM45|80263|tripartite motif containing 45	BC034943|TRIM45|80263|tripartite motif containing 45	AY669488|TRIM45|80263|tripartite motif containing 45	NM_001145635|TRIM45|80263|tripartite motif containing 45	NM_025188|TRIM45|80263|tripartite motif containing 45	CR602755|TRIM45|80263|tripartite motif containing 45
hg18_v1_chrX_+_70669636_70669665	0.00526817	SOX2.p2	NM_181672|OGT|8473|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)	NM_181673|OGT|8473|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)	AL833085|OGT|8473|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)
hg18_v1_chr12_+_53901075_53901075	0.0052639	SOX2.p2	NM_001005280|OR10A7|121364|olfactory receptor, family 10, subfamily A, member 7
hg18_v1_chr1_-_53010929_53010933	0.00524698	SOX2.p2	
hg18_v1_chr19_-_63301418_63301541	0.00522527	SOX2.p2	AK022957|ZSCAN18|65982|zinc finger and SCAN domain containing 18	AY280799|ZSCAN18|65982|zinc finger and SCAN domain containing 18	NM_001145543|ZSCAN18|65982|zinc finger and SCAN domain containing 18	NM_001145544|ZSCAN18|65982|zinc finger and SCAN domain containing 18	NM_023926|ZSCAN18|65982|zinc finger and SCAN domain containing 18
hg18_v1_chr3_+_134985566_134985566	0.00522255	SOX2.p2	NM_021203|SRPRB|58477|signal recognition particle receptor, B subunit
hg18_v1_chr3_+_198961620_198961657	0.00518314	SOX2.p2	AK302546|FYTTD1|84248|forty-two-three domain containing 1
hg18_v1_chr8_-_27171814_27171844	0.00515331	SOX2.p2	CR591479|STMN4|81551|stathmin-like 4	BC011520|STMN4|81551|stathmin-like 4	NM_030795|STMN4|81551|stathmin-like 4	BC111001|STMN4|81551|stathmin-like 4	AK295329|STMN4|81551|stathmin-like 4	AK225142|STMN4|81551|stathmin-like 4	AK294023|STMN4|81551|stathmin-like 4	AK309207|STMN4|81551|stathmin-like 4	AL136568|STMN4|81551|stathmin-like 4
hg18_v1_chr15_+_76517623_76517734	0.00514242	SOX2.p2	AB209403|IREB2|3658|iron-responsive element binding protein 2	CR593632|IREB2|3658|iron-responsive element binding protein 2	BC017880|IREB2|3658|iron-responsive element binding protein 2	AK292992|IREB2|3658|iron-responsive element binding protein 2	BC117481|IREB2|3658|iron-responsive element binding protein 2	BC117483|IREB2|3658|iron-responsive element binding protein 2	BC143948|IREB2|3658|iron-responsive element binding protein 2	M58511|IREB2|3658|iron-responsive element binding protein 2
hg18_v1_chr1_+_28717234_28717346	0.00513457	SOX2.p2	X12654|RCC1|1104|regulator of chromosome condensation 1	NM_001048194|RCC1|1104|regulator of chromosome condensation 1	NM_001048195|RCC1|1104|regulator of chromosome condensation 1	NM_001269|RCC1|1104|regulator of chromosome condensation 1
hg18_v1_chr1_-_17637576_17637619	0.00508896	SOX2.p2	BC042141|RCC2|55920|regulator of chromosome condensation 2
hg18_v1_chr11_-_60885849_60885900	0.00507807	SOX2.p2	BC047710|CYBASC3|220002|cytochrome b, ascorbate dependent 3	AK297063|CYBASC3|220002|cytochrome b, ascorbate dependent 3	AK310976|CYBASC3|220002|cytochrome b, ascorbate dependent 3
hg18_v1_chr2_-_65210695_65210752	0.00507655	SOX2.p2	BC000905|RAB1A|5861|RAB1A, member RAS oncogene family	BX571747|RAB1A|5861|RAB1A, member RAS oncogene family	AL050268|RAB1A|5861|RAB1A, member RAS oncogene family	AK303678|RAB1A|5861|RAB1A, member RAS oncogene family	AK055927|RAB1A|5861|RAB1A, member RAS oncogene family	CR616184|RAB1A|5861|RAB1A, member RAS oncogene family	AK315495|RAB1A|5861|RAB1A, member RAS oncogene family
hg18_v1_chr7_-_148211533_148211559	0.00506261	SOX2.p2	AK302216|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)
hg18_v1_chr1_-_27099515_27099522	0.00505943	SOX2.p2	EU832444|GPATCH3|63906|G patch domain containing 3	EU832527|GPATCH3|63906|G patch domain containing 3
hg18_v1_chr21_+_26029602_26029672	0.00505904	SOX2.p2	U13044|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa
hg18_v1_chrX_+_122145776_122146067	0.00505799	SOX2.p2	NM_000828|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3	NM_007325|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3	BC032004|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3	BC117464|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3	U10301|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3	U10302|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3
hg18_v1_chr7_+_27746268_27746332	0.00504889	SOX2.p2	AK314292|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	AK296720|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	BC024600|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	AK301064|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	AF090891|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	AK000098|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	AL136586|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1
hg18_v1_chr7_-_136678999_136679023	0.0050163	SOX2.p2	CR620419|PTN|5764|pleiotrophin
hg18_v1_chr2_+_102719773_102719855	0.00499683	SOX2.p2	AL832688|TMEM182|130827|transmembrane protein 182	AK054856|TMEM182|130827|transmembrane protein 182	BC107694|TMEM182|130827|transmembrane protein 182	BC073844|TMEM182|130827|transmembrane protein 182
hg18_v1_chr8_+_32698892_32698977	0.00499423	SOX2.p2	NM_001159996|NRG1|3084|neuregulin 1	AK293270|NRG1|3084|neuregulin 1	AK293240|NRG1|3084|neuregulin 1
hg18_v1_chr9_-_124280025_124280055	0.00499084	SOX2.p2	NM_001004451|OR1J1|347168|olfactory receptor, family 1, subfamily J, member 1	BC136933|OR1J1|347168|olfactory receptor, family 1, subfamily J, member 1	BC136938|OR1J1|347168|olfactory receptor, family 1, subfamily J, member 1
hg18_v1_chr8_+_19841010_19841088	0.00498517	SOX2.p2	AK092286|LPL|4023|lipoprotein lipase	AK290290|LPL|4023|lipoprotein lipase	AK222464|LPL|4023|lipoprotein lipase	AK312311|LPL|4023|lipoprotein lipase	M15856|LPL|4023|lipoprotein lipase	X54516|LPL|4023|lipoprotein lipase
hg18_v1_chr2_+_73973640_73973651	0.00497209	SOX2.p2	AK124338|ACTG2|72|actin, gamma 2, smooth muscle, enteric	AK304523|ACTG2|72|actin, gamma 2, smooth muscle, enteric	AK310215|ACTG2|72|actin, gamma 2, smooth muscle, enteric	AK312955|ACTG2|72|actin, gamma 2, smooth muscle, enteric	BC012617|ACTG2|72|actin, gamma 2, smooth muscle, enteric	X16940|ACTG2|72|actin, gamma 2, smooth muscle, enteric
hg18_v1_chrX_+_141941369_141941466	0.00495874	SOX2.p2	BC130503|SPANXN4|441525|SPANX family, member N4	BC130505|SPANXN4|441525|SPANX family, member N4	NM_001009613|SPANXN4|441525|SPANX family, member N4	DQ336126|SPANXN4|441525|SPANX family, member N4	DQ336127|SPANXN4|441525|SPANX family, member N4
hg18_v1_chr1_+_16639753_16639790	0.00495021	SOX2.p2	NM_001145277|NECAP2|55707|NECAP endocytosis associated 2	NM_001145278|NECAP2|55707|NECAP endocytosis associated 2	NM_018090|NECAP2|55707|NECAP endocytosis associated 2
hg18_v1_chr13_+_30672087_30672119	0.00491689	SOX2.p2	NM_194318|B3GALTL|145173|beta 1,3-galactosyltransferase-like
hg18_v1_chr19_+_977555_977580	0.00491062	SOX2.p2	CR616871|CNN2|1265|calponin 2
hg18_v1_chr8_+_19840861_19841003	0.00489396	SOX2.p2	NM_000237|LPL|4023|lipoprotein lipase
hg18_v1_chr16_+_30326864_30326977	0.0048802	SOX2.p2	AF242768|ZNF771|51333|zinc finger protein 771
hg18_v1_chr5_+_109052984_109053008	0.00485019	SOX2.p2	
hg18_v1_chr5_-_110090264_110090348	0.00484111	SOX2.p2	AK296542|TMEM232|642987|transmembrane protein 232	BC042563|TMEM232|642987|transmembrane protein 232	BX648527|TMEM232|642987|transmembrane protein 232	NM_001039763|TMEM232|642987|transmembrane protein 232
hg18_v1_chrX_+_70420259_70420278	0.00483215	SOX2.p2	U02493|NONO|4841|non-POU domain containing, octamer-binding	U89867|NONO|4841|non-POU domain containing, octamer-binding
hg18_v1_chr21_-_31175722_31175744	0.00482252	SOX2.p2	AB096963|KRTAP11-1|337880|keratin associated protein 11-1	BC130555|KRTAP11-1|337880|keratin associated protein 11-1	BC130557|KRTAP11-1|337880|keratin associated protein 11-1	AJ457065|KRTAP11-1|337880|keratin associated protein 11-1	NM_175858|KRTAP11-1|337880|keratin associated protein 11-1
hg18_v1_chr17_-_77093603_77093659	0.00479565	SOX2.p2	CR612876|ACTG1|71|actin, gamma 1
hg18_v1_chr1_-_144322225_144322261	0.00477559	SOX2.p2	CR592330|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)	CR613712|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)	U93867|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)	BC002586|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)	NM_006468|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)
hg18_v1_chr4_+_38341982_38342461	0.00477216	SOX2.p2	NM_016531|KLF3|51274|Kruppel-like factor 3 (basic)	AK313459|KLF3|51274|Kruppel-like factor 3 (basic)	BC051687|KLF3|51274|Kruppel-like factor 3 (basic)	BC030662|KLF3|51274|Kruppel-like factor 3 (basic)	AF285837|KLF3|51274|Kruppel-like factor 3 (basic)	AB024523|KLF3|51274|Kruppel-like factor 3 (basic)
hg18_v1_chr19_+_54872304_54872363	0.00473781	SOX2.p2	AK295973|PRMT1|3276|protein arginine methyltransferase 1	CR595920|PRMT1|3276|protein arginine methyltransferase 1	NM_001536|PRMT1|3276|protein arginine methyltransferase 1	NM_198318|PRMT1|3276|protein arginine methyltransferase 1	CR594562|PRMT1|3276|protein arginine methyltransferase 1	CR615809|PRMT1|3276|protein arginine methyltransferase 1	CR618569|PRMT1|3276|protein arginine methyltransferase 1	CR614514|PRMT1|3276|protein arginine methyltransferase 1	CR625308|PRMT1|3276|protein arginine methyltransferase 1	CR593945|PRMT1|3276|protein arginine methyltransferase 1	CR606998|PRMT1|3276|protein arginine methyltransferase 1	CR593955|PRMT1|3276|protein arginine methyltransferase 1	CR608047|PRMT1|3276|protein arginine methyltransferase 1	CR607814|PRMT1|3276|protein arginine methyltransferase 1	BC019268|PRMT1|3276|protein arginine methyltransferase 1	CR597161|PRMT1|3276|protein arginine methyltransferase 1	CR597475|PRMT1|3276|protein arginine methyltransferase 1	CR620963|PRMT1|3276|protein arginine methyltransferase 1	AY775289|PRMT1|3276|protein arginine methyltransferase 1	D66904|PRMT1|3276|protein arginine methyltransferase 1	Y10805|PRMT1|3276|protein arginine methyltransferase 1	Y10806|PRMT1|3276|protein arginine methyltransferase 1	Y10807|PRMT1|3276|protein arginine methyltransferase 1	BC109282|PRMT1|3276|protein arginine methyltransferase 1	BC109283|PRMT1|3276|protein arginine methyltransferase 1
hg18_v1_chr1_-_153480980_153481276	0.00473464	SOX2.p2	AK311242|GBA|2629|glucosidase, beta, acid	CR616044|GBA|2629|glucosidase, beta, acid	CR609535|GBA|2629|glucosidase, beta, acid	AK312502|GBA|2629|glucosidase, beta, acid	BX648487|GBA|2629|glucosidase, beta, acid	AK300829|GBA|2629|glucosidase, beta, acid	AK291911|GBA|2629|glucosidase, beta, acid	AK300876|GBA|2629|glucosidase, beta, acid	NM_001005741|GBA|2629|glucosidase, beta, acid	NM_001005742|GBA|2629|glucosidase, beta, acid	NM_001171811|GBA|2629|glucosidase, beta, acid
hg18_v1_chr12_-_55405577_55405594	0.00473063	SOX2.p2	NM_001113202|NACA|4666|nascent polypeptide-associated complex alpha subunit	NM_001113203|NACA|4666|nascent polypeptide-associated complex alpha subunit
hg18_v1_chr7_+_74017015_74017018	0.00471125	SOX2.p2	BC147030|GATSL2|729438|GATS protein-like 2	BC147031|GATSL2|729438|GATS protein-like 2	NM_001145063|GATSL1|389523|GATS protein-like 1
hg18_v1_chr10_-_27483144_27483283	0.00467387	SOX2.p2	CR611030|YME1L1|10730|YME1-like 1 (S. cerevisiae)	BC019602|YME1L1|10730|YME1-like 1 (S. cerevisiae)	AY358484|YME1L1|10730|YME1-like 1 (S. cerevisiae)	AK314372|YME1L1|10730|YME1-like 1 (S. cerevisiae)	AK291292|YME1L1|10730|YME1-like 1 (S. cerevisiae)
hg18_v1_chr12_+_54132264_54132264	0.00466749	SOX2.p2	NM_054105|OR6C2|341416|olfactory receptor, family 6, subfamily C, member 2
hg18_v1_chr5_+_109053034_109053054	0.00465786	SOX2.p2	NM_002372|MAN2A1|4124|mannosidase, alpha, class 2A, member 1
hg18_v1_chr19_+_11569234_11569349	0.00463185	SOX2.p2	NM_145295|ZNF627|199692|zinc finger protein 627	BC098416|ZNF627|199692|zinc finger protein 627	AK095639|ZNF627|199692|zinc finger protein 627	BC006279|ZNF627|199692|zinc finger protein 627	AK074846|ZNF627|199692|zinc finger protein 627	BC069232|ZNF627|199692|zinc finger protein 627
hg18_v1_chr12_+_43896134_43896142	0.00463012	SOX2.p2	AK302819|ANO6|196527|anoctamin 6	NM_001142680|ANO6|196527|anoctamin 6
hg18_v1_chr6_-_31736488_31736545	0.00462907	SOX2.p2	AJ245433|C6orf47|57827|chromosome 6 open reading frame 47	BC063584|C6orf47|57827|chromosome 6 open reading frame 47	BC012950|C6orf47|57827|chromosome 6 open reading frame 47	NM_021184|C6orf47|57827|chromosome 6 open reading frame 47
hg18_v1_chr2_+_113015962_113016083	0.00461556	SOX2.p2	AK128044|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa	NM_001137604|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa	NM_019014|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa	AK302814|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa
hg18_v1_chr1_-_59022275_59022372	0.00461321	SOX2.p2	BC002646|JUN|3725|jun proto-oncogene	BC068522|JUN|3725|jun proto-oncogene	NM_002228|JUN|3725|jun proto-oncogene
hg18_v1_chr2_+_231629839_231629851	0.00460297	SOX2.p2	BC064398|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1
hg18_v1_chr17_-_2977594_2977708	0.00460124	SOX2.p2	BC069379|OR1G1|8390|olfactory receptor, family 1, subfamily G, member 1	NM_003555|OR1G1|8390|olfactory receptor, family 1, subfamily G, member 1	BC095520|OR1G1|8390|olfactory receptor, family 1, subfamily G, member 1
hg18_v1_chr9_+_129066576_129066681	0.00459505	SOX2.p2	NM_032293|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3	AK293732|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3	AK095679|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3
hg18_v1_chr6_+_57062944_57062967	0.00459483	SOX2.p2	BC098382|ZNF451|26036|zinc finger protein 451	AK225806|ZNF451|26036|zinc finger protein 451	AB011148|ZNF451|26036|zinc finger protein 451
hg18_v1_chr2_+_112749617_112749648	0.00457983	SOX2.p2	NM_198581|ZC3H6|376940|zinc finger CCCH-type containing 6
hg18_v1_chr5_+_172415891_172416089	0.00457141	SOX2.p2	BX647768|C5orf41|153222|chromosome 5 open reading frame 41	NM_001168393|C5orf41|153222|chromosome 5 open reading frame 41	NM_001168394|C5orf41|153222|chromosome 5 open reading frame 41	NM_153607|C5orf41|153222|chromosome 5 open reading frame 41	AK300043|C5orf41|153222|chromosome 5 open reading frame 41	AY139008|C5orf41|153222|chromosome 5 open reading frame 41	BC041709|C5orf41|153222|chromosome 5 open reading frame 41	AY174896|C5orf41|153222|chromosome 5 open reading frame 41	AK124117|C5orf41|153222|chromosome 5 open reading frame 41	BX647573|C5orf41|153222|chromosome 5 open reading frame 41	AK291677|C5orf41|153222|chromosome 5 open reading frame 41
hg18_v1_chr22_-_35233032_35233095	0.00456474	SOX2.p2	AK025714|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2	AK225347|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2	AK315555|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2	NM_024955|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2	BC040351|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2	NM_001102371|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2
hg18_v1_chr7_+_50106227_50106227	0.00453538	SOX2.p2	NM_001161834|C7orf72|100130988|chromosome 7 open reading frame 72
hg18_v1_chr9_-_127043436_127043453	0.00452112	SOX2.p2	AK293604|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)	X87949|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)
hg18_v1_chr15_+_48261649_48261916	0.0045059	SOX2.p2	AK290262|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2	NM_001159629|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2	NM_003645|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2	AF096290|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2	AK222859|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2	D88308|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2	AK223145|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2	BC057770|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2
hg18_v1_chr1_-_23567084_23567487	0.00450471	SOX2.p2	EU446536|ZNF436|80818|zinc finger protein 436	AK308173|ZNF436|80818|zinc finger protein 436	BC056400|ZNF436|80818|zinc finger protein 436	AK092364|ZNF436|80818|zinc finger protein 436	AL834485|ZNF436|80818|zinc finger protein 436	NM_030634|ZNF436|80818|zinc finger protein 436
hg18_v1_chr4_-_166253374_166253448	0.00448443	SOX2.p2	BC036301|TMEM192|201931|transmembrane protein 192	BX648915|TMEM192|201931|transmembrane protein 192	BX538029|TMEM192|201931|transmembrane protein 192
hg18_v1_chr6_-_33864883_33864894	0.00448279	SOX2.p2	BC039864|LEMD2|221496|LEM domain containing 2	NM_181336|LEMD2|221496|LEM domain containing 2
hg18_v1_chr1_-_223683141_223683141	0.00447352	SOX2.p2	NM_194442|LBR|3930|lamin B receptor
hg18_v1_chrX_-_15782842_15782858	0.00447251	SOX2.p2	AK296135|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit	AK299921|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit	AK312594|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit
hg18_v1_chrX_-_74660024_74660061	0.00446412	SOX2.p2	NM_001146256|ZDHHC15|158866|zinc finger, DHHC-type containing 15	NM_001146257|ZDHHC15|158866|zinc finger, DHHC-type containing 15	NM_144969|ZDHHC15|158866|zinc finger, DHHC-type containing 15
hg18_v1_chr1_-_21373816_21373837	0.00446272	SOX2.p2	BC030578|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3	NM_001198803|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3
hg18_v1_chr13_-_49597776_49597856	0.00445951	SOX2.p2	AF380424|DLEU2|8847|deleted in lymphocytic leukemia 2 (non-protein coding)
hg18_v1_chr1_+_118273887_118273916	0.00443103	SOX2.p2	NM_006784|WDR3|10885|WD repeat domain 3	AK292438|WDR3|10885|WD repeat domain 3	AF083217|WDR3|10885|WD repeat domain 3
hg18_v1_chrX_+_46289871_46289906	0.00443053	SOX2.p2	BC034616|LOC401588|401588|hypothetical LOC401588	AK056314|LOC401588|401588|hypothetical LOC401588	CR619110|LOC401588|401588|hypothetical LOC401588
hg18_v1_chr2_+_176724358_176724560	0.00441947	SOX2.p2	NM_014621|HOXD4|3233|homeobox D4	X04706|HOXD4|3233|homeobox D4	AK313885|HOXD4|3233|homeobox D4	BC016763|HOXD4|3233|homeobox D4	BC074797|HOXD4|3233|homeobox D4
hg18_v1_chr12_-_100979893_100979921	0.00440469	SOX2.p2	BC010889|CCDC53|51019|coiled-coil domain containing 53
hg18_v1_chr22_-_37382252_37382366	0.0043887	SOX2.p2	AK301819|LOC646851|646851|hypothetical LOC646851
hg18_v1_chr8_+_61592278_61592331	0.00438674	SOX2.p2	M28213|RAB2A|5862|RAB2A, member RAS oncogene family	CR605346|RAB2A|5862|RAB2A, member RAS oncogene family	AF498930|RAB2A|5862|RAB2A, member RAS oncogene family	BT019695|RAB2A|5862|RAB2A, member RAS oncogene family
hg18_v1_chr12_+_48047428_48047895	0.00437077	SOX2.p2	BC017767|SPATS2|65244|spermatogenesis associated, serine-rich 2	AL833614|SPATS2|65244|spermatogenesis associated, serine-rich 2	BC048299|SPATS2|65244|spermatogenesis associated, serine-rich 2	AK292334|SPATS2|65244|spermatogenesis associated, serine-rich 2	AK023202|SPATS2|65244|spermatogenesis associated, serine-rich 2	BX648916|SPATS2|65244|spermatogenesis associated, serine-rich 2	BC032441|SPATS2|65244|spermatogenesis associated, serine-rich 2
hg18_v1_chr12_-_55920741_55920793	0.00436198	SOX2.p2	BC011910|NDUFA4L2|56901|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2	NM_020142|NDUFA4L2|56901|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2	AK094275|NDUFA4L2|56901|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2
hg18_v1_chr6_-_75972473_75972528	0.00436075	SOX2.p2	AK307558|COL12A1|1303|collagen, type XII, alpha 1
hg18_v1_chr8_+_19841120_19841170	0.00434866	SOX2.p2	X14390|LPL|4023|lipoprotein lipase	BC011353|LPL|4023|lipoprotein lipase
hg18_v1_chr2_-_64224948_64225108	0.00433963	SOX2.p2	BC063611|PELI1|57162|pellino homolog 1 (Drosophila)	BC050533|PELI1|57162|pellino homolog 1 (Drosophila)	AK312441|PELI1|57162|pellino homolog 1 (Drosophila)	BC050019|PELI1|57162|pellino homolog 1 (Drosophila)	NM_020651|PELI1|57162|pellino homolog 1 (Drosophila)
hg18_v1_chr11_-_14336606_14336648	0.00432862	SOX2.p2	AK309550|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2	AK309683|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2	NM_001177315|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2	NM_001102669|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2
hg18_v1_chr19_-_9799469_9799539	0.00430998	SOX2.p2	CR592319|FBXL12|54850|F-box and leucine-rich repeat protein 12	CR614447|FBXL12|54850|F-box and leucine-rich repeat protein 12
hg18_v1_chr6_-_53321706_53321901	0.00430985	SOX2.p2	AK299674|ELOVL5|60481|ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)	AK302948|ELOVL5|60481|ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)	NM_021814|ELOVL5|60481|ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)	AF338241|ELOVL5|60481|ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)
hg18_v1_chr12_-_51001407_51001448	0.00430142	SOX2.p2	BC126935|KRT83|3889|keratin 83	BC128063|KRT83|3889|keratin 83	BC069546|KRT83|3889|keratin 83	X99141|KRT83|3889|keratin 83	AK314904|KRT83|3889|keratin 83	NM_002282|KRT83|3889|keratin 83
hg18_v1_chr14_+_71468902_71468911	0.00429228	SOX2.p2	AK294486|RGS6|9628|regulator of G-protein signaling 6
hg18_v1_chr19_-_52614151_52614194	0.00424011	SOX2.p2	AK289950|MEIS3|56917|Meis homeobox 3
hg18_v1_chr5_-_111121691_111121813	0.00423222	SOX2.p2	NM_001142477|C5orf13|9315|chromosome 5 open reading frame 13	NM_001142476|C5orf13|9315|chromosome 5 open reading frame 13
hg18_v1_chr14_-_37795001_37795066	0.00419399	SOX2.p2	CR594082|CLEC14A|161198|C-type lectin domain family 14, member A	AY573061|CLEC14A|161198|C-type lectin domain family 14, member A	BC031567|CLEC14A|161198|C-type lectin domain family 14, member A	AY606132|CLEC14A|161198|C-type lectin domain family 14, member A
hg18_v1_chr1_+_32600384_32600448	0.00418918	SOX2.p2	BC035354|TSSK3|81629|testis-specific serine kinase 3	NM_052841|TSSK3|81629|testis-specific serine kinase 3
hg18_v1_chr1_-_1613802_1613848	0.00418472	SOX2.p2	CR936618|SLC35E2B|728661|solute carrier family 35, member E2B	BC062371|SLC35E2|9906|solute carrier family 35, member E2
hg18_v1_chr20_+_34667590_34667596	0.00415979	SOX2.p2	CR624571|C20orf24|55969|chromosome 20 open reading frame 24
hg18_v1_chr3_+_4510030_4510033	0.00415448	SOX2.p2	NM_001099952|ITPR1|3708|inositol 1,4,5-triphosphate receptor, type 1	NM_001168272|ITPR1|3708|inositol 1,4,5-triphosphate receptor, type 1	NM_002222|ITPR1|3708|inositol 1,4,5-triphosphate receptor, type 1	AK311008|ITPR1|3708|inositol 1,4,5-triphosphate receptor, type 1
hg18_v1_chr3_-_185085352_185085361	0.00412296	SOX2.p2	AK024765|PARL|55486|presenilin associated, rhomboid-like
hg18_v1_chr14_-_37795290_37795324	0.00411318	SOX2.p2	AY358395|CLEC14A|161198|C-type lectin domain family 14, member A	BX248017|CLEC14A|161198|C-type lectin domain family 14, member A	NM_175060|CLEC14A|161198|C-type lectin domain family 14, member A
hg18_v1_chr11_-_74914066_74914246	0.00408161	SOX2.p2	BC090053|GDPD5|81544|glycerophosphodiester phosphodiesterase domain containing 5	AF318351|GDPD5|81544|glycerophosphodiester phosphodiesterase domain containing 5	NM_030792|GDPD5|81544|glycerophosphodiester phosphodiesterase domain containing 5
hg18_v1_chrX_+_151860870_151860900	0.00407536	SOX2.p2	NM_001178115|ZNF185|7739|zinc finger protein 185 (LIM domain)	AK095258|ZNF185|7739|zinc finger protein 185 (LIM domain)
hg18_v1_chr12_+_132167512_132167542	0.00403888	SOX2.p2	U09368|ZNF140|7699|zinc finger protein 140	AK303240|ZNF140|7699|zinc finger protein 140
hg18_v1_chr12_-_109390439_109390471	0.00403626	SOX2.p2	AK223209|GPN3|51184|GPN-loop GTPase 3	AK314946|GPN3|51184|GPN-loop GTPase 3	BC008416|GPN3|51184|GPN-loop GTPase 3	BC031024|GPN3|51184|GPN-loop GTPase 3	AY359078|GPN3|51184|GPN-loop GTPase 3	BX537973|GPN3|51184|GPN-loop GTPase 3	CR613385|GPN3|51184|GPN-loop GTPase 3	NM_001164373|GPN3|51184|GPN-loop GTPase 3	NM_016301|GPN3|51184|GPN-loop GTPase 3
hg18_v1_chr1_-_115070413_115070531	0.00403072	SOX2.p2	BC021692|CSDE1|7812|cold shock domain containing E1, RNA-binding	CR594529|CSDE1|7812|cold shock domain containing E1, RNA-binding
hg18_v1_chr11_+_44073674_44073827	0.00402832	SOX2.p2	NM_001178083|EXT2|2132|exostosin 2	NM_207122|EXT2|2132|exostosin 2	U62740|EXT2|2132|exostosin 2	AK312375|EXT2|2132|exostosin 2	BC010058|EXT2|2132|exostosin 2	AK296713|EXT2|2132|exostosin 2
hg18_v1_chr1_+_153445113_153445211	0.003999	SOX2.p2	NM_002455|MTX1|4580|metaxin 1	NM_198883|MTX1|4580|metaxin 1	AK313863|MTX1|4580|metaxin 1	BC001906|MTX1|4580|metaxin 1
hg18_v1_chr8_+_19841209_19841231	0.00399793	SOX2.p2	BT006726|LPL|4023|lipoprotein lipase	CR457054|LPL|4023|lipoprotein lipase	DQ893541|LPL|4023|lipoprotein lipase	DQ893751|LPL|4023|lipoprotein lipase
hg18_v1_chr9_+_116389814_116389911	0.00399626	SOX2.p2	NM_004888|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1	BC003564|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1	AF038954|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1	BC008452|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1	CR617444|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1	CR607789|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1
hg18_v1_chr21_+_26029393_26029402	0.00398851	SOX2.p2	AK313545|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa
hg18_v1_chr11_+_68124400_68124505	0.00398342	SOX2.p2	AK001920|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3
hg18_v1_chr7_-_26206891_26206943	0.00398001	SOX2.p2	BX537494|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1	NM_002137|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1	NM_031243|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1
hg18_v1_chr3_+_10043139_10043182	0.00397788	SOX2.p2	BC013582|FANCD2|2177|Fanconi anemia, complementation group D2	BC038666|FANCD2|2177|Fanconi anemia, complementation group D2
hg18_v1_chr6_-_52549774_52549847	0.00397765	SOX2.p2	AK291751|TRAM2|9697|translocation associated membrane protein 2	BC028121|TRAM2|9697|translocation associated membrane protein 2	NM_012288|TRAM2|9697|translocation associated membrane protein 2
hg18_v1_chr10_-_128199986_128199999	0.00397387	SOX2.p2	BC140898|C10orf90|118611|chromosome 10 open reading frame 90	BC146869|C10orf90|118611|chromosome 10 open reading frame 90	AK057500|C10orf90|118611|chromosome 10 open reading frame 90	NM_001004298|C10orf90|118611|chromosome 10 open reading frame 90
hg18_v1_chr15_-_89366689_89366859	0.00396796	SOX2.p2	BC016445|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	AK074863|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	AF201694|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	CR604260|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	AK315721|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	AF308803|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	AK027754|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	AK300608|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	AK293688|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	AK308480|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	NM_018668|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)
hg18_v1_chr6_+_126112417_126112424	0.00396273	SOX2.p2	NM_012259|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2
hg18_v1_chr15_+_38673734_38673778	0.00395832	SOX2.p2	AB022190|CASC5|57082|cancer susceptibility candidate 5	BC014306|CASC5|57082|cancer susceptibility candidate 5	NM_144508|CASC5|57082|cancer susceptibility candidate 5	NM_170589|CASC5|57082|cancer susceptibility candidate 5	AK307605|CASC5|57082|cancer susceptibility candidate 5	AK307996|CASC5|57082|cancer susceptibility candidate 5	AF248041|CASC5|57082|cancer susceptibility candidate 5	AF461041|CASC5|57082|cancer susceptibility candidate 5	BC029373|CASC5|57082|cancer susceptibility candidate 5
hg18_v1_chr3_+_10043097_10043121	0.00395303	SOX2.p2	AK307512|FANCD2|2177|Fanconi anemia, complementation group D2	NM_001018115|FANCD2|2177|Fanconi anemia, complementation group D2	NM_033084|FANCD2|2177|Fanconi anemia, complementation group D2
hg18_v1_chr12_-_90100710_90100715	0.00395188	SOX2.p2	AL355731|DCN|1634|decorin	CR613885|DCN|1634|decorin	CR616358|DCN|1634|decorin
hg18_v1_chr11_+_33236435_33236455	0.00395102	SOX2.p2	AK293009|HIPK3|10114|homeodomain interacting protein kinase 3
hg18_v1_chr13_-_27092538_27092670	0.00392782	SOX2.p2	BC036755|LNX2|222484|ligand of numb-protein X 2
hg18_v1_chr15_+_48434941_48435041	0.00391867	SOX2.p2	BX537481|LOC100129387|100129387|hypothetical LOC100129387	CR596421|LOC100129387|100129387|hypothetical LOC100129387
hg18_v1_chr2_+_231629852_231629868	0.00391771	SOX2.p2	BC014013|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC032445|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC112344|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC114434|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	AK312528|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC001053|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	AK307513|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1
hg18_v1_chr17_-_5344898_5345093	0.00391032	SOX2.p2	CR622361|LOC728392|728392|hypothetical protein LOC728392	AF217966|LOC728392|728392|hypothetical protein LOC728392	CR604079|LOC728392|728392|hypothetical protein LOC728392	CR619296|LOC728392|728392|hypothetical protein LOC728392	CR623524|LOC728392|728392|hypothetical protein LOC728392	CR608370|LOC728392|728392|hypothetical protein LOC728392	CR620539|LOC728392|728392|hypothetical protein LOC728392	CR612487|LOC728392|728392|hypothetical protein LOC728392	CR612489|LOC728392|728392|hypothetical protein LOC728392	AF131825|LOC728392|728392|hypothetical protein LOC728392	CR620726|LOC728392|728392|hypothetical protein LOC728392	NM_001162371|LOC728392|728392|hypothetical protein LOC728392	CR618493|LOC728392|728392|hypothetical protein LOC728392
hg18_v1_chr3_+_14964080_14964239	0.00390044	SOX2.p2	AK290590|NR2C2|7182|nuclear receptor subfamily 2, group C, member 2	L27586|NR2C2|7182|nuclear receptor subfamily 2, group C, member 2	NM_003298|NR2C2|7182|nuclear receptor subfamily 2, group C, member 2
hg18_v1_chr9_-_127043169_127043434	0.00388599	SOX2.p2	AF188611|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)	AF216292|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)	DQ892173|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)	DQ895368|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)	AJ271729|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)	BC020235|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)
hg18_v1_chr6_+_155579788_155579852	0.00388507	SOX2.p2	NM_001010927|TIAM2|26230|T-cell lymphoma invasion and metastasis 2	AK299723|TIAM2|26230|T-cell lymphoma invasion and metastasis 2	BC066979|TIAM2|26230|T-cell lymphoma invasion and metastasis 2	AF120324|TIAM2|26230|T-cell lymphoma invasion and metastasis 2	BC022469|TIAM2|26230|T-cell lymphoma invasion and metastasis 2
hg18_v1_chr4_+_47403107_47403116	0.00387957	SOX2.p2	
hg18_v1_chr22_+_18485068_18485075	0.0038574	SOX2.p2	X83617|RANBP1|5902|RAN binding protein 1
hg18_v1_chr11_-_105398118_105398221	0.00381873	SOX2.p2	AL834523|KIAA1826|84437|KIAA1826	BC041118|KIAA1826|84437|KIAA1826	AB058729|KIAA1826|84437|KIAA1826	NM_032424|KIAA1826|84437|KIAA1826
hg18_v1_chr3_-_10042989_10043077	0.00381741	SOX2.p2	BC006266|CIDECP|152302|cell death-inducing DFFA-like effector c pseudogene	BC069255|CIDECP|152302|cell death-inducing DFFA-like effector c pseudogene	BC043599|CIDECP|152302|cell death-inducing DFFA-like effector c pseudogene	BC090925|CIDECP|152302|cell death-inducing DFFA-like effector c pseudogene
hg18_v1_chrX_+_41078353_41078449	0.0037926	SOX2.p2	AK291153|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AK296906|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AK297159|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AK304689|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AK310891|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	BC055083|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AF086430|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	BC007668|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AF061337|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	BC011819|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AB208983|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AB451220|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AB451343|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked
hg18_v1_chrX_-_37964924_37965215	0.00379018	SOX2.p2	U61374|SRPX|8406|sushi-repeat containing protein, X-linked	U78093|SRPX|8406|sushi-repeat containing protein, X-linked	CR625902|SRPX|8406|sushi-repeat containing protein, X-linked	CR597663|SRPX|8406|sushi-repeat containing protein, X-linked	CR606094|SRPX|8406|sushi-repeat containing protein, X-linked	CR609268|SRPX|8406|sushi-repeat containing protein, X-linked	CR613384|SRPX|8406|sushi-repeat containing protein, X-linked	AK298802|SRPX|8406|sushi-repeat containing protein, X-linked	AK289430|SRPX|8406|sushi-repeat containing protein, X-linked	BC020684|SRPX|8406|sushi-repeat containing protein, X-linked	CR591734|SRPX|8406|sushi-repeat containing protein, X-linked	AK293127|SRPX|8406|sushi-repeat containing protein, X-linked	AK125542|SRPX|8406|sushi-repeat containing protein, X-linked	NM_001170750|SRPX|8406|sushi-repeat containing protein, X-linked	NM_001170751|SRPX|8406|sushi-repeat containing protein, X-linked	NM_001170752|SRPX|8406|sushi-repeat containing protein, X-linked	NM_006307|SRPX|8406|sushi-repeat containing protein, X-linked
hg18_v1_chrX_-_101284026_101284100	0.00378951	SOX2.p2	BC071675|TCEAL6|158931|transcription elongation factor A (SII)-like 6	NM_001006938|TCEAL6|158931|transcription elongation factor A (SII)-like 6
hg18_v1_chr6_+_96132064_96132181	0.00377968	SOX2.p2	BX640869|MANEA|79694|mannosidase, endo-alpha	NM_024641|MANEA|79694|mannosidase, endo-alpha	AY048774|MANEA|79694|mannosidase, endo-alpha	AY048775|MANEA|79694|mannosidase, endo-alpha	BC146671|MANEA|79694|mannosidase, endo-alpha	BC150199|MANEA|79694|mannosidase, endo-alpha	CR936827|MANEA|79694|mannosidase, endo-alpha	AK291940|MANEA|79694|mannosidase, endo-alpha	BX537398|MANEA|79694|mannosidase, endo-alpha
hg18_v1_chrX_-_130250880_130251007	0.00377745	SOX2.p2	Y10523|IGSF1|3547|immunoglobulin superfamily, member 1	AK057916|IGSF1|3547|immunoglobulin superfamily, member 1	BC063884|IGSF1|3547|immunoglobulin superfamily, member 1	AF034198|IGSF1|3547|immunoglobulin superfamily, member 1	CR614008|IGSF1|3547|immunoglobulin superfamily, member 1	AB058894|IGSF1|3547|immunoglobulin superfamily, member 1	AK226008|IGSF1|3547|immunoglobulin superfamily, member 1	AK307871|IGSF1|3547|immunoglobulin superfamily, member 1
hg18_v1_chr11_-_27637771_27637771	0.00374618	SOX2.p2	EF689009|BDNF|627|brain-derived neurotrophic factor	EF689010|BDNF|627|brain-derived neurotrophic factor	NM_001143816|BDNF|627|brain-derived neurotrophic factor	NM_170735|BDNF|627|brain-derived neurotrophic factor
hg18_v1_chr6_-_91063181_91063284	0.00373933	SOX2.p2	AJ271878|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2	NM_021813|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2
hg18_v1_chr6_-_89729989_89730065	0.00373527	SOX2.p2	AB012142|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase	AB012143|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase	BC019954|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase	AK295719|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase	AK312407|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase	AK299777|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase
hg18_v1_chr16_-_128258_128651	0.00373268	SOX2.p2	AK298795|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)	BC004185|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)	BC012825|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)	AK300736|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)	BC020392|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)	NM_001039476|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)
hg18_v1_chr6_-_89729846_89729974	0.00371469	SOX2.p2	AB009022|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase	AB009023|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase	AB009024|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase
hg18_v1_chr12_-_51233001_51233197	0.00370747	SOX2.p2	AJ308601|KRT71|112802|keratin 71	EU832765|KRT71|112802|keratin 71	GQ129308|KRT71|112802|keratin 71	AJ308600|KRT71|112802|keratin 71	BC103917|KRT71|112802|keratin 71	BC103918|KRT71|112802|keratin 71	AJ308599|KRT71|112802|keratin 71	AK122795|KRT71|112802|keratin 71	NM_033448|KRT71|112802|keratin 71
hg18_v1_chr1_-_167603623_167603809	0.00369807	SOX2.p2	CR605539|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	AB209049|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	CR599535|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	BC006983|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	AK290701|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	AF153191|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	AK094513|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	AK301917|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	NM_013330|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	NM_197972|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)
hg18_v1_chr4_-_87500398_87500398	0.00368883	SOX2.p2	NM_138980|MAPK10|5602|mitogen-activated protein kinase 10	NM_138982|MAPK10|5602|mitogen-activated protein kinase 10
hg18_v1_chr10_+_69314347_69314480	0.00366269	SOX2.p2	AF083106|SIRT1|23411|sirtuin 1	NM_012238|SIRT1|23411|sirtuin 1	AF235040|SIRT1|23411|sirtuin 1
hg18_v1_chr1_-_1157284_1157309	0.00365125	SOX2.p2	NM_016176|SDF4|51150|stromal cell derived factor 4	NM_016547|SDF4|51150|stromal cell derived factor 4
hg18_v1_chr6_+_18263514_18263755	0.0035976	SOX2.p2	BC113093|KDM1B|221656|lysine (K)-specific demethylase 1B	NM_153042|KDM1B|221656|lysine (K)-specific demethylase 1B	AK125318|KDM1B|221656|lysine (K)-specific demethylase 1B
hg18_v1_chr3_+_51837608_51837608	0.00359121	SOX2.p2	NM_001085479|IQCF3|401067|IQ motif containing F3
hg18_v1_chr9_+_124742932_124743167	0.00358084	SOX2.p2	AK131449|RABGAP1|23637|RAB GTPase activating protein 1	BC020609|RABGAP1|23637|RAB GTPase activating protein 1	NM_012197|RABGAP1|23637|RAB GTPase activating protein 1	AK022408|RABGAP1|23637|RAB GTPase activating protein 1	BC054492|RABGAP1|23637|RAB GTPase activating protein 1	AF161357|RABGAP1|23637|RAB GTPase activating protein 1	AJ011679|RABGAP1|23637|RAB GTPase activating protein 1
hg18_v1_chr15_-_48434567_48434617	0.00358019	SOX2.p2	BC016910|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	D13316|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	BC050702|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	AK303901|GABPB1|2553|GA binding protein transcription factor, beta subunit 1
hg18_v1_chr4_-_54625463_54625521	0.00355362	SOX2.p2	AF159423|CHIC2|26511|cysteine-rich hydrophobic domain 2	BC034691|CHIC2|26511|cysteine-rich hydrophobic domain 2
hg18_v1_chr11_+_34029764_34029814	0.00351732	SOX2.p2	BC001731|CAPRIN1|4076|cell cycle associated protein 1	NM_005898|CAPRIN1|4076|cell cycle associated protein 1	NM_203364|CAPRIN1|4076|cell cycle associated protein 1
hg18_v1_chr12_+_132167551_132167669	0.00348946	SOX2.p2	BC040561|ZNF140|7699|zinc finger protein 140	AK296572|ZNF140|7699|zinc finger protein 140	AK313145|ZNF140|7699|zinc finger protein 140	CR601967|ZNF140|7699|zinc finger protein 140	BC022291|ZNF140|7699|zinc finger protein 140
hg18_v1_chr6_-_47385599_47385599	0.00348926	SOX2.p2	AK001504|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg18_v1_chr1_+_153445629_153445679	0.00348027	SOX2.p2	CR605982|MTX1|4580|metaxin 1	CR614718|MTX1|4580|metaxin 1	BC035616|MTX1|4580|metaxin 1	CR591813|MTX1|4580|metaxin 1	CR619225|MTX1|4580|metaxin 1
hg18_v1_chr7_+_138675644_138675780	0.00346274	SOX2.p2	AK298166|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)
hg18_v1_chr9_+_103335941_103335962	0.00344529	SOX2.p2	AF265230|RNF20|56254|ring finger protein 20	NM_019592|RNF20|56254|ring finger protein 20	AK022532|RNF20|56254|ring finger protein 20	BC110584|RNF20|56254|ring finger protein 20	BC110585|RNF20|56254|ring finger protein 20	BC152309|RNF20|56254|ring finger protein 20
hg18_v1_chr19_+_49147219_49147236	0.00342207	SOX2.p2	AK314207|ZNF221|7638|zinc finger protein 221	AF187987|ZNF221|7638|zinc finger protein 221	NM_013359|ZNF221|7638|zinc finger protein 221
hg18_v1_chr6_+_12825022_12825037	0.00341941	SOX2.p2	AK290017|PHACTR1|221692|phosphatase and actin regulator 1
hg18_v1_chr9_-_138880530_138880589	0.00341899	SOX2.p2	BT009863|EDF1|8721|endothelial differentiation-related factor 1	CR541914|EDF1|8721|endothelial differentiation-related factor 1	DQ891577|EDF1|8721|endothelial differentiation-related factor 1	DQ894770|EDF1|8721|endothelial differentiation-related factor 1	AB002282|EDF1|8721|endothelial differentiation-related factor 1	AB002283|EDF1|8721|endothelial differentiation-related factor 1	BC015500|EDF1|8721|endothelial differentiation-related factor 1	NM_003792|EDF1|8721|endothelial differentiation-related factor 1	NM_153200|EDF1|8721|endothelial differentiation-related factor 1
hg18_v1_chr19_-_63301402_63301411	0.00341206	SOX2.p2	AK296417|ZSCAN18|65982|zinc finger and SCAN domain containing 18
hg18_v1_chr13_+_96884682_96884725	0.00337118	SOX2.p2	AF205602|RAP2A|5911|RAP2A, member of RAS oncogene family	BC070031|RAP2A|5911|RAP2A, member of RAS oncogene family	EU832309|RAP2A|5911|RAP2A, member of RAS oncogene family	EU832393|RAP2A|5911|RAP2A, member of RAS oncogene family	X12534|RAP2A|5911|RAP2A, member of RAS oncogene family	AF493914|RAP2A|5911|RAP2A, member of RAS oncogene family
hg18_v1_chr19_+_9295854_9296020	0.00336466	SOX2.p2	AK027700|ZNF559|84527|zinc finger protein 559	AK308517|ZNF559|84527|zinc finger protein 559	AK309952|ZNF559|84527|zinc finger protein 559	AK310117|ZNF559|84527|zinc finger protein 559	AK092348|ZNF559|84527|zinc finger protein 559	AK056489|ZNF559|84527|zinc finger protein 559	AK310020|ZNF559|84527|zinc finger protein 559	AK310781|ZNF559|84527|zinc finger protein 559	AK298169|ZNF559|84527|zinc finger protein 559	BC006436|ZNF559|84527|zinc finger protein 559	NM_032497|ZNF559|84527|zinc finger protein 559	AL389938|ZNF559|84527|zinc finger protein 559	BC034489|ZNF559-ZNF177|100529215|ZNF559-ZNF177 read-through transcript	NM_001172650|ZNF559-ZNF177|100529215|ZNF559-ZNF177 read-through transcript
hg18_v1_chr7_-_8268666_8268730	0.00335738	SOX2.p2	U38260|ICA1|3382|islet cell autoantigen 1, 69kDa	L01100|ICA1|3382|islet cell autoantigen 1, 69kDa	BC008640|ICA1|3382|islet cell autoantigen 1, 69kDa	BC005922|ICA1|3382|islet cell autoantigen 1, 69kDa	NM_004968|ICA1|3382|islet cell autoantigen 1, 69kDa
hg18_v1_chr19_+_3958690_3958768	0.00335333	SOX2.p2	BC066895|PIAS4|51588|protein inhibitor of activated STAT, 4	AK022481|PIAS4|51588|protein inhibitor of activated STAT, 4	BC029874|PIAS4|51588|protein inhibitor of activated STAT, 4	NM_015897|PIAS4|51588|protein inhibitor of activated STAT, 4	AK222726|PIAS4|51588|protein inhibitor of activated STAT, 4	AF077952|PIAS4|51588|protein inhibitor of activated STAT, 4	DQ892419|PIAS4|51588|protein inhibitor of activated STAT, 4	DQ895633|PIAS4|51588|protein inhibitor of activated STAT, 4	BC010047|PIAS4|51588|protein inhibitor of activated STAT, 4
hg18_v1_chr3_+_48931276_48931299	0.00335188	SOX2.p2	NM_006321|ARIH2|10425|ariadne homolog 2 (Drosophila)	BC000422|ARIH2|10425|ariadne homolog 2 (Drosophila)
hg18_v1_chr1_+_153374967_153375011	0.00331366	SOX2.p2	BC005943|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1	BC010869|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1	BC069245|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1	CR457148|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1
hg18_v1_chr2_+_61146542_61146622	0.00330821	SOX2.p2	AL833595|KIAA1841|84542|KIAA1841	BX647395|KIAA1841|84542|KIAA1841
hg18_v1_chr5_-_36036883_36036886	0.00330548	SOX2.p2	BC035012|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1	NM_001171873|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1
hg18_v1_chr6_-_47385605_47385703	0.00326369	SOX2.p2	NM_014452|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg18_v1_chr1_-_201422450_201422458	0.00326366	SOX2.p2	AK225266|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	AK225584|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	AK130142|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	AK130200|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)
hg18_v1_chr20_+_34667566_34667589	0.00325805	SOX2.p2	NM_018840|C20orf24|55969|chromosome 20 open reading frame 24	NM_199483|C20orf24|55969|chromosome 20 open reading frame 24	AF112213|C20orf24|55969|chromosome 20 open reading frame 24
hg18_v1_chr4_+_189297591_189297638	0.00325667	SOX2.p2	AK093499|TRIML1|339976|tripartite motif family-like 1	NM_178556|TRIML1|339976|tripartite motif family-like 1	BC113860|TRIML1|339976|tripartite motif family-like 1	BC114469|TRIML1|339976|tripartite motif family-like 1
hg18_v1_chr8_+_104452961_104453097	0.00325556	SOX2.p2	BC014245|CTHRC1|115908|collagen triple helix repeat containing 1	NM_138455|CTHRC1|115908|collagen triple helix repeat containing 1	AY136825|CTHRC1|115908|collagen triple helix repeat containing 1	CR596030|CTHRC1|115908|collagen triple helix repeat containing 1	CR605392|CTHRC1|115908|collagen triple helix repeat containing 1	CR594803|CTHRC1|115908|collagen triple helix repeat containing 1	CR612318|CTHRC1|115908|collagen triple helix repeat containing 1	CR592899|CTHRC1|115908|collagen triple helix repeat containing 1
hg18_v1_chr1_+_28936030_28936219	0.00322793	SOX2.p2	AK303833|YTHDF2|51441|YTH domain family, member 2	NM_001172828|YTHDF2|51441|YTH domain family, member 2	CR599207|YTHDF2|51441|YTH domain family, member 2	AF432214|YTHDF2|51441|YTH domain family, member 2	CR593745|YTHDF2|51441|YTH domain family, member 2	CR595878|YTHDF2|51441|YTH domain family, member 2	AF155095|YTHDF2|51441|YTH domain family, member 2	AF192968|YTHDF2|51441|YTH domain family, member 2	DQ892157|YTHDF2|51441|YTH domain family, member 2	DQ895352|YTHDF2|51441|YTH domain family, member 2	AB451335|YTHDF2|51441|YTH domain family, member 2	AB451484|YTHDF2|51441|YTH domain family, member 2
hg18_v1_chr4_+_42590038_42590039	0.00322044	SOX2.p2	NM_001080476|GRXCR1|389207|glutaredoxin, cysteine rich 1
hg18_v1_chr6_-_52549673_52549761	0.00317994	SOX2.p2	DQ891068|TRAM2|9697|translocation associated membrane protein 2	DQ894250|TRAM2|9697|translocation associated membrane protein 2	D31762|TRAM2|9697|translocation associated membrane protein 2
hg18_v1_chr12_+_67489063_67489073	0.00317988	SOX2.p2	EU076746|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)	EU076747|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)	EU076748|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)	EU076749|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)
hg18_v1_chr11_+_55554470_55554470	0.00317485	SOX2.p2	NM_001001921|OR5AS1|219447|olfactory receptor, family 5, subfamily AS, member 1
hg18_v1_chr19_+_54872220_54872303	0.00316745	SOX2.p2	AK304660|PRMT1|3276|protein arginine methyltransferase 1
hg18_v1_chr21_+_16024241_16024583	0.0031667	SOX2.p2	NM_013396|USP25|29761|ubiquitin specific peptidase 25	AF134213|USP25|29761|ubiquitin specific peptidase 25	BC015930|USP25|29761|ubiquitin specific peptidase 25	FJ763652|USP25|29761|ubiquitin specific peptidase 25
hg18_v1_chr7_+_99613282_99613318	0.00316257	SOX2.p2	AJ007798|STAG3|10734|stromal antigen 3
hg18_v1_chr19_-_44214972_44215174	0.00314942	SOX2.p2	BC030060|FBXO27|126433|F-box protein 27	AF436061|FBXO27|126433|F-box protein 27	BC014527|FBXO27|126433|F-box protein 27	NM_178820|FBXO27|126433|F-box protein 27	CR615928|FBXO27|126433|F-box protein 27
hg18_v1_chr6_-_108688860_108688914	0.00314299	SOX2.p2	CR595428|SNX3|8724|sorting nexin 3	CR606126|SNX3|8724|sorting nexin 3	BC008444|SNX3|8724|sorting nexin 3
hg18_v1_chr11_+_114054409_114054507	0.00311844	SOX2.p2	NM_182495|FAM55B|120406|family with sequence similarity 55, member B	AK057953|FAM55B|120406|family with sequence similarity 55, member B	BC111797|FAM55B|120406|family with sequence similarity 55, member B
hg18_v1_chr9_-_32540818_32540908	0.00311536	SOX2.p2	U82939|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase
hg18_v1_chr1_+_148521852_148521882	0.00311048	SOX2.p2	BC047238|C1orf51|148523|chromosome 1 open reading frame 51	NM_144697|C1orf51|148523|chromosome 1 open reading frame 51	AK098755|C1orf51|148523|chromosome 1 open reading frame 51	AK315397|C1orf51|148523|chromosome 1 open reading frame 51
hg18_v1_chr8_+_38877909_38878027	0.00309615	SOX2.p2	AK098787|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2	NM_021623|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2	AK296068|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2	AK291842|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2	AF286164|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2
hg18_v1_chr9_-_127043455_127043615	0.00308402	SOX2.p2	NM_005347|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)
hg18_v1_chr1_+_178867744_178867777	0.00307924	SOX2.p2	BC028576|XPR1|9213|xenotropic and polytropic retrovirus receptor 1	NM_001135669|XPR1|9213|xenotropic and polytropic retrovirus receptor 1	NM_004736|XPR1|9213|xenotropic and polytropic retrovirus receptor 1
hg18_v1_chr3_-_187138527_187138617	0.00305603	SOX2.p2	AK315632|TRA2B|6434|transformer 2 beta homolog (Drosophila)	NM_004593|TRA2B|6434|transformer 2 beta homolog (Drosophila)
hg18_v1_chr22_+_18484810_18485027	0.00304814	SOX2.p2	D38076|RANBP1|5902|RAN binding protein 1	NM_002882|RANBP1|5902|RAN binding protein 1	AK223506|RANBP1|5902|RAN binding protein 1
hg18_v1_chr6_-_30748597_30748759	0.00303989	SOX2.p2	DQ895906|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16	BC002789|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16	AB001601|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16	AK312264|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16	BC008825|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16	BC009392|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16
hg18_v1_chr12_-_44948976_44949044	0.00303313	SOX2.p2	BC010620|SLC38A1|81539|solute carrier family 38, member 1	BX648676|SLC38A1|81539|solute carrier family 38, member 1
hg18_v1_chr19_+_9593136_9593217	0.00301033	SOX2.p2	CR598956|LOC284385|284385|hypothetical LOC284385	AK097685|LOC284385|284385|hypothetical LOC284385	BC143540|LOC284385|284385|hypothetical LOC284385
hg18_v1_chr3_-_62334229_62334229	0.00299247	SOX2.p2	AK290464|FEZF2|55079|FEZ family zinc finger 2	NM_018008|FEZF2|55079|FEZ family zinc finger 2
hg18_v1_chr15_-_63069146_63069229	0.00296038	SOX2.p2	AK172849|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	AK225527|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	AK312943|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	CR592296|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	CR605959|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	CR593134|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	CR613754|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	BC000244|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)
hg18_v1_chr1_-_1157216_1157219	0.00295505	SOX2.p2	CR625758|SDF4|51150|stromal cell derived factor 4
hg18_v1_chr6_+_3204184_3204292	0.00295276	SOX2.p2	AK126623|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4	AK095683|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4
hg18_v1_chr13_-_51631996_51631996	0.00295107	SOX2.p2	NM_001146099|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3	NM_002498|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3
hg18_v1_chr4_+_81475897_81475946	0.00294301	SOX2.p2	BC034296|C4orf22|255119|chromosome 4 open reading frame 22	NM_152770|C4orf22|255119|chromosome 4 open reading frame 22	AK128642|C4orf22|255119|chromosome 4 open reading frame 22	AY349359|C4orf22|255119|chromosome 4 open reading frame 22	DQ893197|C4orf22|255119|chromosome 4 open reading frame 22	DQ893198|C4orf22|255119|chromosome 4 open reading frame 22	DQ896152|C4orf22|255119|chromosome 4 open reading frame 22	DQ896153|C4orf22|255119|chromosome 4 open reading frame 22	DQ896154|C4orf22|255119|chromosome 4 open reading frame 22	DQ896534|C4orf22|255119|chromosome 4 open reading frame 22	DQ896535|C4orf22|255119|chromosome 4 open reading frame 22
hg18_v1_chr1_-_152847301_152847347	0.00293546	SOX2.p2	AK304153|ADAR|103|adenosine deaminase, RNA-specific	X79449|ADAR|103|adenosine deaminase, RNA-specific	NM_001111|ADAR|103|adenosine deaminase, RNA-specific	NM_015840|ADAR|103|adenosine deaminase, RNA-specific	NM_015841|ADAR|103|adenosine deaminase, RNA-specific
hg18_v1_chr1_+_179164195_179164213	0.00292455	SOX2.p2	
hg18_v1_chr4_+_76868830_76868849	0.00290469	SOX2.p2	AK314289|USO1|8615|USO1 vesicle docking protein homolog (yeast)
hg18_v1_chr3_+_9826643_9826643	0.00288886	SOX2.p2	NM_001025930|TTLL3|26140|tubulin tyrosine ligase-like family, member 3
hg18_v1_chr7_-_105712646_105712873	0.00283541	SOX2.p2	BC072439|NAMPT|10135|nicotinamide phosphoribosyltransferase	BC106046|NAMPT|10135|nicotinamide phosphoribosyltransferase	CR593609|NAMPT|10135|nicotinamide phosphoribosyltransferase	NM_005746|NAMPT|10135|nicotinamide phosphoribosyltransferase
hg18_v1_chr1_+_167342149_167342306	0.0028337	SOX2.p2	CR596103|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide
hg18_v1_chr6_-_88356411_88356442	0.0028296	SOX2.p2	AK023550|RARS2|57038|arginyl-tRNA synthetase 2, mitochondrial	BC022341|RARS2|57038|arginyl-tRNA synthetase 2, mitochondrial	BC010420|RARS2|57038|arginyl-tRNA synthetase 2, mitochondrial
hg18_v1_chr1_-_27099524_27099552	0.00281199	SOX2.p2	BC007767|GPATCH3|63906|G patch domain containing 3	CR619450|GPATCH3|63906|G patch domain containing 3	AL833886|GPATCH3|63906|G patch domain containing 3	AK308100|GPATCH3|63906|G patch domain containing 3	AK022517|GPATCH3|63906|G patch domain containing 3	AK057930|GPATCH3|63906|G patch domain containing 3	AK303183|GPATCH3|63906|G patch domain containing 3	CR936767|GPATCH3|63906|G patch domain containing 3	NM_022078|GPATCH3|63906|G patch domain containing 3
hg18_v1_chr8_+_146248593_146248630	0.00279357	SOX2.p2	NM_023080|C8orf33|65265|chromosome 8 open reading frame 33	AK024642|C8orf33|65265|chromosome 8 open reading frame 33
hg18_v1_chr1_-_154988045_154988075	0.00278342	SOX2.p2	CR626656|HDGF|3068|hepatoma-derived growth factor
hg18_v1_chr11_-_45896144_45896249	0.00278048	SOX2.p2	AF118240|PEX16|9409|peroxisomal biogenesis factor 16	NM_004813|PEX16|9409|peroxisomal biogenesis factor 16	NM_057174|PEX16|9409|peroxisomal biogenesis factor 16
hg18_v1_chr3_-_36961539_36961610	0.00276827	SOX2.p2	NM_014831|TRANK1|9881|tetratricopeptide repeat and ankyrin repeat containing 1
hg18_v1_chr3_-_130195608_130195675	0.0027675	SOX2.p2	AK056377|KIAA1257|57501|KIAA1257	BC038736|KIAA1257|57501|KIAA1257	AB033083|KIAA1257|57501|KIAA1257	NM_020741|KIAA1257|57501|KIAA1257
hg18_v1_chr1_+_20081495_20081507	0.00276388	SOX2.p2	AB007928|OTUD3|23252|OTU domain containing 3
hg18_v1_chr17_+_25730086_25730098	0.00275287	SOX2.p2	D85390|CPD|1362|carboxypeptidase D	BC045624|CPD|1362|carboxypeptidase D
hg18_v1_chr9_-_124630630_124630755	0.00274004	SOX2.p2	BC017227|PDCL|5082|phosducin-like	CR623512|PDCL|5082|phosducin-like	AL117602|PDCL|5082|phosducin-like	CR618226|PDCL|5082|phosducin-like	CR618655|PDCL|5082|phosducin-like	AF031463|PDCL|5082|phosducin-like	AK313429|PDCL|5082|phosducin-like	NM_005388|PDCL|5082|phosducin-like
hg18_v1_chr14_-_59166976_59167061	0.00273282	SOX2.p2	CR457030|RTN1|6252|reticulon 1	L10335|RTN1|6252|reticulon 1	CR591662|RTN1|6252|reticulon 1
hg18_v1_chr3_+_130641765_130641777	0.00272989	SOX2.p2	AK124140|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	AK293852|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	AK023000|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	BC003045|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	BC004238|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)
hg18_v1_chr1_-_52116598_52116646	0.00271076	SOX2.p2	AK299271|NRD1|4898|nardilysin (N-arginine dibasic convertase)
hg18_v1_chr19_+_977624_977625	0.00270459	SOX2.p2	AK297774|CNN2|1265|calponin 2
hg18_v1_chr20_+_31219543_31219620	0.00268421	SOX2.p2	AK291854|C20orf70|140683|chromosome 20 open reading frame 70	BC065726|C20orf70|140683|chromosome 20 open reading frame 70	NM_080574|C20orf70|140683|chromosome 20 open reading frame 70
hg18_v1_chr11_-_61491643_61491683	0.00265632	SOX2.p2	BC020300|FTH1|2495|ferritin, heavy polypeptide 1	BC015946|FTH1|2495|ferritin, heavy polypeptide 1	CR610503|FTH1|2495|ferritin, heavy polypeptide 1	BC063514|FTH1|2495|ferritin, heavy polypeptide 1	BC011359|FTH1|2495|ferritin, heavy polypeptide 1	BC070494|FTH1|2495|ferritin, heavy polypeptide 1	AB062402|FTH1|2495|ferritin, heavy polypeptide 1	BC013724|FTH1|2495|ferritin, heavy polypeptide 1	BC073750|FTH1|2495|ferritin, heavy polypeptide 1	CR626495|FTH1|2495|ferritin, heavy polypeptide 1	BC000857|FTH1|2495|ferritin, heavy polypeptide 1	BC035441|FTH1|2495|ferritin, heavy polypeptide 1	CR599520|FTH1|2495|ferritin, heavy polypeptide 1	CR624378|FTH1|2495|ferritin, heavy polypeptide 1	CR619451|FTH1|2495|ferritin, heavy polypeptide 1	CR600685|FTH1|2495|ferritin, heavy polypeptide 1	AK307190|CPSF7|79869|cleavage and polyadenylation specific factor 7, 59kDa	AK311818|FTH1|2495|ferritin, heavy polypeptide 1	BC016009|FTH1|2495|ferritin, heavy polypeptide 1	BC066341|FTH1|2495|ferritin, heavy polypeptide 1	BC066961|FTH1|2495|ferritin, heavy polypeptide 1	BC104643|FTH1|2495|ferritin, heavy polypeptide 1	BC105802|FTH1|2495|ferritin, heavy polypeptide 1	L20941|FTH1|2495|ferritin, heavy polypeptide 1	D28463|FTH1|2495|ferritin, heavy polypeptide 1
hg18_v1_chr13_-_51922731_51922806	0.00265518	SOX2.p2	AF151903|VPS36|51028|vacuolar protein sorting 36 homolog (S. cerevisiae)	BC050439|VPS36|51028|vacuolar protein sorting 36 homolog (S. cerevisiae)	BC037279|VPS36|51028|vacuolar protein sorting 36 homolog (S. cerevisiae)	AK289740|VPS36|51028|vacuolar protein sorting 36 homolog (S. cerevisiae)	NM_016075|VPS36|51028|vacuolar protein sorting 36 homolog (S. cerevisiae)
hg18_v1_chr11_+_122806196_122806424	0.00263911	SOX2.p2	CR599196|LOC100128242|100128242|hypothetical LOC100128242
hg18_v1_chr1_+_178867787_178867795	0.00263873	SOX2.p2	BC041142|XPR1|9213|xenotropic and polytropic retrovirus receptor 1	AF089744|XPR1|9213|xenotropic and polytropic retrovirus receptor 1
hg18_v1_chrX_+_48934831_48934838	0.00263591	SOX2.p2	
hg18_v1_chr5_+_137716169_137716190	0.00262104	SOX2.p2	AF338242|KDM3B|51780|lysine (K)-specific demethylase 3B	NM_016604|KDM3B|51780|lysine (K)-specific demethylase 3B
hg18_v1_chr5_+_170779664_170779808	0.00261483	SOX2.p2	BC006245|FGF18|8817|fibroblast growth factor 18	AB007422|FGF18|8817|fibroblast growth factor 18	AF211188|FGF18|8817|fibroblast growth factor 18	AM393798|FGF18|8817|fibroblast growth factor 18	BT019570|FGF18|8817|fibroblast growth factor 18	BT019571|FGF18|8817|fibroblast growth factor 18	DQ892736|FGF18|8817|fibroblast growth factor 18	DQ895983|FGF18|8817|fibroblast growth factor 18
hg18_v1_chr4_-_153675602_153675886	0.00260747	SOX2.p2	BC117244|FBXW7|55294|F-box and WD repeat domain containing 7	BC117246|FBXW7|55294|F-box and WD repeat domain containing 7	BC143944|FBXW7|55294|F-box and WD repeat domain containing 7	NM_033632|FBXW7|55294|F-box and WD repeat domain containing 7	CR749305|FBXW7|55294|F-box and WD repeat domain containing 7
hg18_v1_chr14_+_64948332_64948414	0.00260537	SOX2.p2	BC142958|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	AK292413|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	AK294242|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	Y17976|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	Y17977|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)
hg18_v1_chr17_+_20970828_20970909	0.00259019	SOX2.p2	AL117567|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B	NM_015510|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B	AF151851|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B	BC004126|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B	BC009679|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B	CR457124|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B
hg18_v1_chr2_+_27652892_27652896	0.00253814	SOX2.p2	CR749335|C2orf16|84226|chromosome 2 open reading frame 16	NM_032266|C2orf16|84226|chromosome 2 open reading frame 16	BC140828|C2orf16|84226|chromosome 2 open reading frame 16
hg18_v1_chr6_-_53321658_53321702	0.00251712	SOX2.p2	AB209798|ELOVL5|60481|ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)	AL136939|ELOVL5|60481|ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)	BC074503|ELOVL5|60481|ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)	BC067123|ELOVL5|60481|ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)
hg18_v1_chr1_+_224064365_224064425	0.00249304	SOX2.p2	AK313436|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)	NM_001136018|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)
hg18_v1_chr14_+_54238581_54238697	0.00248072	SOX2.p2	AB028976|SAMD4A|23034|sterile alpha motif domain containing 4A
hg18_v1_chrX_+_108666891_108667130	0.00245436	SOX2.p2	AF246127|NXT2|55916|nuclear transport factor 2-like export factor 2	AJ277591|NXT2|55916|nuclear transport factor 2-like export factor 2	AJ278323|NXT2|55916|nuclear transport factor 2-like export factor 2
hg18_v1_chr10_+_103815114_103815152	0.00244532	SOX2.p2	BC014993|HPS6|79803|Hermansky-Pudlak syndrome 6	NM_024747|HPS6|79803|Hermansky-Pudlak syndrome 6	AF536238|HPS6|79803|Hermansky-Pudlak syndrome 6	BC011594|HPS6|79803|Hermansky-Pudlak syndrome 6
hg18_v1_chr15_-_75364387_75364387	0.00242617	SOX2.p2	NM_024776|PEAK1|79834|NKF3 kinase family member
hg18_v1_chr2_-_171998681_171998864	0.00242327	SOX2.p2	AK124092|METTL8|79828|methyltransferase like 8	BC025250|METTL8|79828|methyltransferase like 8	CR612022|METTL8|79828|methyltransferase like 8	AK024046|METTL8|79828|methyltransferase like 8
hg18_v1_chr15_-_63069280_63069318	0.00241511	SOX2.p2	CR597831|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	AK301362|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	NM_001127890|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	NM_016630|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	CR601212|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)
hg18_v1_chr11_-_8147111_8147168	0.00238661	SOX2.p2	AM422214|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AY326435|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AK315379|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AL832601|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AK293933|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AK296505|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AY358475|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	BC022455|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AY326436|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	BX647514|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	NM_001135109|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	NM_024557|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)
hg18_v1_chrX_-_32340291_32340291	0.00236037	SOX2.p2	NM_004011|DMD|1756|dystrophin	NM_004012|DMD|1756|dystrophin
hg18_v1_chr9_-_15500899_15501022	0.00234508	SOX2.p2	BC040032|PSIP1|11168|PC4 and SFRS1 interacting protein 1	BC013160|PSIP1|11168|PC4 and SFRS1 interacting protein 1	AF432220|PSIP1|11168|PC4 and SFRS1 interacting protein 1	BC064135|PSIP1|11168|PC4 and SFRS1 interacting protein 1	AF063020|PSIP1|11168|PC4 and SFRS1 interacting protein 1	BC022971|PSIP1|11168|PC4 and SFRS1 interacting protein 1	BC033817|PSIP1|11168|PC4 and SFRS1 interacting protein 1	BC044568|PSIP1|11168|PC4 and SFRS1 interacting protein 1	NM_001128217|PSIP1|11168|PC4 and SFRS1 interacting protein 1	NM_033222|PSIP1|11168|PC4 and SFRS1 interacting protein 1
hg18_v1_chr1_-_52116894_52116948	0.00233408	SOX2.p2	AY049784|NRD1|4898|nardilysin (N-arginine dibasic convertase)
hg18_v1_chr6_-_100123124_100123232	0.00232104	SOX2.p2	AB125137|CCNC|892|cyclin C	BC050726|CCNC|892|cyclin C	AK223247|CCNC|892|cyclin C	M74091|CCNC|892|cyclin C	AK291914|CCNC|892|cyclin C	AK222768|CCNC|892|cyclin C	BC026272|CCNC|892|cyclin C	BC030159|CCNC|892|cyclin C	BC056153|CCNC|892|cyclin C
hg18_v1_chr3_-_185085384_185085420	0.00230959	SOX2.p2	NM_001037639|PARL|55486|presenilin associated, rhomboid-like	NM_018622|PARL|55486|presenilin associated, rhomboid-like
hg18_v1_chr10_-_61335967_61336090	0.00229598	SOX2.p2	
hg18_v1_chr16_-_47872880_47872908	0.00229301	SOX2.p2	
hg18_v1_chr12_+_52132154_52132169	0.00227784	SOX2.p2	BC071942|PCBP2|5094|poly(rC) binding protein 2
hg18_v1_chr1_+_202031373_202031421	0.00226647	SOX2.p2	NM_014827|ZC3H11A|9877|zinc finger CCCH-type containing 11A	CR627439|ZC3H11A|9877|zinc finger CCCH-type containing 11A	AK095858|ZC3H11A|9877|zinc finger CCCH-type containing 11A
hg18_v1_chr1_+_117404467_117404487	0.00225776	SOX2.p2	AF073771|TTF2|8458|transcription termination factor, RNA polymerase II	NM_003594|TTF2|8458|transcription termination factor, RNA polymerase II	AF080255|TTF2|8458|transcription termination factor, RNA polymerase II	BC015341|TTF2|8458|transcription termination factor, RNA polymerase II	BC030058|TTF2|8458|transcription termination factor, RNA polymerase II
hg18_v1_chr1_-_17637398_17637500	0.00225453	SOX2.p2	BC142946|RCC2|55920|regulator of chromosome condensation 2
hg18_v1_chr19_+_61607194_61607194	0.00224583	SOX2.p2	NM_001159860|ZNF583|147949|zinc finger protein 583
hg18_v1_chr3_-_63824496_63824528	0.00223846	SOX2.p2	CR457373|THOC7|80145|THO complex 7 homolog (Drosophila)	BC065012|THOC7|80145|THO complex 7 homolog (Drosophila)	AK225110|THOC7|80145|THO complex 7 homolog (Drosophila)
hg18_v1_chr10_-_44775110_44775116	0.00222782	SOX2.p2	CR598948|LOC220980|220980|hypothetical LOC220980	CR614419|LOC220980|220980|hypothetical LOC220980
hg18_v1_chr1_+_243199906_243200064	0.00221169	SOX2.p2	AK090927|EFCAB2|84288|EF-hand calcium binding domain 2
hg18_v1_chr1_+_153560841_153560991	0.00219769	SOX2.p2	AK298730|RUSC1|23623|RUN and SH3 domain containing 1	NM_014328|RUSC1|23623|RUN and SH3 domain containing 1	AK093777|RUSC1|23623|RUN and SH3 domain containing 1	CR604047|RUSC1|23623|RUN and SH3 domain containing 1	BC001045|RUSC1|23623|RUN and SH3 domain containing 1	AK307736|RUSC1|23623|RUN and SH3 domain containing 1	AK074485|RUSC1|23623|RUN and SH3 domain containing 1	CR594338|RUSC1|23623|RUN and SH3 domain containing 1	AB026894|RUSC1|23623|RUN and SH3 domain containing 1	CR607256|RUSC1|23623|RUN and SH3 domain containing 1	AK074982|RUSC1|23623|RUN and SH3 domain containing 1	BC028055|RUSC1|23623|RUN and SH3 domain containing 1	CR594503|RUSC1|23623|RUN and SH3 domain containing 1	CR603792|RUSC1|23623|RUN and SH3 domain containing 1	BC004293|RUSC1|23623|RUN and SH3 domain containing 1	CR618456|RUSC1|23623|RUN and SH3 domain containing 1	BX640612|RUSC1|23623|RUN and SH3 domain containing 1
hg18_v1_chr13_-_29067795_29067846	0.00219374	SOX2.p2	NM_003045|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1
hg18_v1_chr3_+_52694975_52695148	0.00218585	SOX2.p2	AF191018|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	NM_014366|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	NM_206825|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	NM_206826|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	AK315484|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	AK027514|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	CR607914|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	CR598596|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	CR608648|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	AK027516|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	BC001024|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	EU831969|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	EU832062|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)
hg18_v1_chr3_+_130641639_130641761	0.00217729	SOX2.p2	AK022525|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	NM_018262|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	NM_052985|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	NM_052989|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	NM_052990|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	AF244930|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	AF244931|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	AK315103|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	AK001759|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	AK223095|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)
hg18_v1_chr5_-_140033310_140033354	0.00217381	SOX2.p2	AY321065|DND1|373863|dead end homolog 1 (zebrafish)	DQ892455|DND1|373863|dead end homolog 1 (zebrafish)	DQ895667|DND1|373863|dead end homolog 1 (zebrafish)	EU176217|DND1|373863|dead end homolog 1 (zebrafish)	BC033496|DND1|373863|dead end homolog 1 (zebrafish)	NM_194249|DND1|373863|dead end homolog 1 (zebrafish)
hg18_v1_chr4_+_6768682_6768797	0.00217198	SOX2.p2	CR625701|CNO|55330|cappuccino homolog (mouse)	CR626399|CNO|55330|cappuccino homolog (mouse)	AK002092|CNO|55330|cappuccino homolog (mouse)	NM_018366|CNO|55330|cappuccino homolog (mouse)	CR598245|CNO|55330|cappuccino homolog (mouse)
hg18_v1_chr7_+_153215316_153215351	0.00216855	SOX2.p2	BX647966|DPP6|1804|dipeptidyl-peptidase 6	NM_001039350|DPP6|1804|dipeptidyl-peptidase 6
hg18_v1_chr2_-_128285214_128285238	0.00216422	SOX2.p2	BC005401|WDR33|55339|WD repeat domain 33	NM_001006622|WDR33|55339|WD repeat domain 33	NM_001006623|WDR33|55339|WD repeat domain 33	NM_018383|WDR33|55339|WD repeat domain 33
hg18_v1_chr3_+_130641828_130641828	0.00216109	SOX2.p2	BC028353|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)
hg18_v1_chr12_+_6950204_6950336	0.00216077	SOX2.p2	NM_006331|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)	BC055314|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)	AK298207|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)
hg18_v1_chr16_+_57055049_57055113	0.00216016	SOX2.p2	NM_020465|NDRG4|65009|NDRG family member 4
hg18_v1_chr9_-_99724559_99724672	0.00214989	SOX2.p2	CR605882|C9orf156|51531|chromosome 9 open reading frame 156	DQ892983|C9orf156|51531|chromosome 9 open reading frame 156	DQ896231|C9orf156|51531|chromosome 9 open reading frame 156	AY189280|C9orf156|51531|chromosome 9 open reading frame 156	AF151053|C9orf156|51531|chromosome 9 open reading frame 156	CR620447|C9orf156|51531|chromosome 9 open reading frame 156	AK309270|C9orf156|51531|chromosome 9 open reading frame 156	BC002863|C9orf156|51531|chromosome 9 open reading frame 156	CR604210|C9orf156|51531|chromosome 9 open reading frame 156	AK000213|C9orf156|51531|chromosome 9 open reading frame 156	AK302701|C9orf156|51531|chromosome 9 open reading frame 156	NM_016481|C9orf156|51531|chromosome 9 open reading frame 156
hg18_v1_chr1_+_178867780_178867784	0.00213872	SOX2.p2	AK309750|XPR1|9213|xenotropic and polytropic retrovirus receptor 1
hg18_v1_chr1_+_20081424_20081478	0.00213524	SOX2.p2	NM_015207|OTUD3|23252|OTU domain containing 3
hg18_v1_chr11_+_6823458_6823489	0.00212965	SOX2.p2	BC093651|OR10A5|144124|olfactory receptor, family 10, subfamily A, member 5	BC093653|OR10A5|144124|olfactory receptor, family 10, subfamily A, member 5	AF324499|OR10A5|144124|olfactory receptor, family 10, subfamily A, member 5	NM_178168|OR10A5|144124|olfactory receptor, family 10, subfamily A, member 5
hg18_v1_chr6_-_2696152_2696198	0.00210833	SOX2.p2	BX647582|MYLK4|340156|myosin light chain kinase family, member 4	NM_001012418|MYLK4|340156|myosin light chain kinase family, member 4	AK096893|MYLK4|340156|myosin light chain kinase family, member 4
hg18_v1_chr1_+_171950684_171950754	0.0021029	SOX2.p2	NM_014458|KLHL20|27252|kelch-like 20 (Drosophila)	AK308048|KLHL20|27252|kelch-like 20 (Drosophila)	AK300755|KLHL20|27252|kelch-like 20 (Drosophila)	AK001430|KLHL20|27252|kelch-like 20 (Drosophila)
hg18_v1_chr8_+_118032370_118032398	0.00210051	SOX2.p2	AK298294|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8	NM_001172813|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8	NM_001172815|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8	AL713790|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8
hg18_v1_chr18_-_42956730_42956732	0.00209621	SOX2.p2	AK027108|IER3IP1|51124|immediate early response 3 interacting protein 1
hg18_v1_chr1_+_74473672_74473693	0.00207952	SOX2.p2	AF116826|TNNI3K|51086|TNNI3 interacting kinase	NM_015978|TNNI3K|51086|TNNI3 interacting kinase	AK307984|TNNI3K|51086|TNNI3 interacting kinase	BC113539|TNNI3K|51086|TNNI3 interacting kinase	BC117262|TNNI3K|51086|TNNI3 interacting kinase	AY303691|TNNI3K|51086|TNNI3 interacting kinase
hg18_v1_chr7_-_33047042_33047046	0.00207893	SOX2.p2	BC015856|NT5C3|51251|5'-nucleotidase, cytosolic III	NM_001166118|NT5C3|51251|5'-nucleotidase, cytosolic III	NM_016489|NT5C3|51251|5'-nucleotidase, cytosolic III
hg18_v1_chr22_-_37043163_37043312	0.00206526	SOX2.p2	BC006490|CSNK1E|1454|casein kinase 1, epsilon	AB091043|CSNK1E|1454|casein kinase 1, epsilon	CR591261|CSNK1E|1454|casein kinase 1, epsilon	CR596620|CSNK1E|1454|casein kinase 1, epsilon	CR601194|CSNK1E|1454|casein kinase 1, epsilon	AK223498|CSNK1E|1454|casein kinase 1, epsilon	CR618321|CSNK1E|1454|casein kinase 1, epsilon	CR601968|CSNK1E|1454|casein kinase 1, epsilon	CR614988|CSNK1E|1454|casein kinase 1, epsilon
hg18_v1_chr20_+_56989690_56989714	0.00206516	SOX2.p2	AK293410|TH1L|51497|TH1-like (Drosophila)	AK304310|TH1L|51497|TH1-like (Drosophila)	CR616677|TH1L|51497|TH1-like (Drosophila)	NM_198976|TH1L|51497|TH1-like (Drosophila)
hg18_v1_chr3_+_133801670_133801670	0.00206403	SOX2.p2	NM_178445|CCRL1|51554|chemokine (C-C motif) receptor-like 1
hg18_v1_chr2_+_167468220_167468220	0.00205152	SOX2.p2	NM_001079810|XIRP2|129446|xin actin-binding repeat containing 2	NM_152381|XIRP2|129446|xin actin-binding repeat containing 2
hg18_v1_chr11_-_65082705_65082828	0.0020333	SOX2.p2	AK299351|LTBP3|4054|latent transforming growth factor beta binding protein 3
hg18_v1_chr4_-_2233606_2233637	0.0020072	SOX2.p2	BC002713|MXD4|10608|MAX dimerization protein 4
hg18_v1_chr12_+_52960798_52960857	0.00200666	SOX2.p2	AK129814|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	AK303303|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	AK308679|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC070315|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC108266|HNRNPA1L2|144983|heterogeneous nuclear ribonucleoprotein A1-like 2	CR618488|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR622443|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	AK291113|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR590129|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR590800|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR593319|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR593400|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR596532|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR597068|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR598845|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR598960|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR600314|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR601721|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR602906|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR603477|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR604435|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR604458|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR605772|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR608892|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR610851|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR610890|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR611042|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR611985|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR612776|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR614407|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR615846|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR616053|HNRNPA1P10|664709|heterogeneous nuclear ribonucleoprotein A1 pseudogene 10	CR617360|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR617756|HNRNPA1P10|664709|heterogeneous nuclear ribonucleoprotein A1 pseudogene 10	CR617885|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR618573|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR620105|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR620193|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR622067|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR622713|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR624282|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR624664|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR625195|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR625490|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR625937|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR626448|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR626484|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR626498|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR605048|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC071945|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR610363|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR597174|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR598050|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR603757|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR611088|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR607943|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC078165|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC073162|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC121133|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC074502|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR595283|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR600495|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR601024|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR607779|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR609019|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR611182|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR613694|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR616984|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR618106|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR618772|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR619770|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR620719|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR620988|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR622095|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR626543|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR626585|HNRNPA1P10|664709|heterogeneous nuclear ribonucleoprotein A1 pseudogene 10	CR591763|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR595244|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR612285|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR612903|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR616623|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR618174|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR624419|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC002355|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC033714|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR590581|HNRNPA1P10|664709|heterogeneous nuclear ribonucleoprotein A1 pseudogene 10	CR605418|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR611606|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR619167|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR590877|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR621589|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR624350|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR598479|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC052296|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR621950|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC020442|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC103707|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	X79536|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC012158|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	U00947|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1
hg18_v1_chr6_+_88174408_88174462	0.00200308	SOX2.p2	NM_001031743|C6orf165|154313|chromosome 6 open reading frame 165	BC035083|C6orf165|154313|chromosome 6 open reading frame 165	AK093830|C6orf165|154313|chromosome 6 open reading frame 165	BC045171|C6orf165|154313|chromosome 6 open reading frame 165
hg18_v1_chrX_-_72215949_72216075	0.00200251	SOX2.p2	BC136492|PABPC1L2B|645974|poly(A) binding protein, cytoplasmic 1-like 2B	NM_001012977|PABPC1L2A|340529|poly(A) binding protein, cytoplasmic 1-like 2A
hg18_v1_chrX_-_106846684_106846886	0.00200132	SOX2.p2	CR533450|TSC22D3|1831|TSC22 domain family, member 3	EU831656|TSC22D3|1831|TSC22 domain family, member 3	EU831739|TSC22D3|1831|TSC22 domain family, member 3	AK311834|TSC22D3|1831|TSC22 domain family, member 3	AY007119|TSC22D3|1831|TSC22 domain family, member 3	CR599119|TSC22D3|1831|TSC22 domain family, member 3	AK127938|TSC22D3|1831|TSC22 domain family, member 3
hg18_v1_chr11_-_65871592_65871742	0.00199696	SOX2.p2	DQ892706|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	DQ895957|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	CR623114|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK075354|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK098779|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK225182|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	CR591559|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK294604|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	BC021965|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK293715|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AF029893|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK098389|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	CR617432|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	NM_006876|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1
hg18_v1_chr7_+_27746231_27746267	0.0019968	SOX2.p2	NM_001079864|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	NM_006024|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1
hg18_v1_chr17_+_78009895_78009968	0.00199463	SOX2.p2	BC016440|NARF|26502|nuclear prelamin A recognition factor	CR611448|NARF|26502|nuclear prelamin A recognition factor
hg18_v1_chr1_+_160734259_160734414	0.00199454	SOX2.p2	AJ536197|UHMK1|127933|U2AF homology motif (UHM) kinase 1	AK292369|UHMK1|127933|U2AF homology motif (UHM) kinase 1	AB384827|UHMK1|127933|U2AF homology motif (UHM) kinase 1
hg18_v1_chr1_-_152422304_152422308	0.00199094	SOX2.p2	AK301674|TPM3|7170|tropomyosin 3	AK315504|TPM3|7170|tropomyosin 3	BX648485|TPM3|7170|tropomyosin 3
hg18_v1_chr6_-_88468591_88468665	0.00197108	SOX2.p2	BC000764|AKIRIN2|55122|akirin 2	BC003042|AKIRIN2|55122|akirin 2	CR599380|AKIRIN2|55122|akirin 2
hg18_v1_chr12_+_122762835_122762863	0.00195768	SOX2.p2	BC022300|ATP6V0A2|23545|ATPase, H+ transporting, lysosomal V0 subunit a2
hg18_v1_chr11_-_85053807_85053874	0.00195241	SOX2.p2	BC060807|CREBZF|58487|CREB/ATF bZIP transcription factor	NM_001039618|CREBZF|58487|CREB/ATF bZIP transcription factor
hg18_v1_chr10_-_64248932_64248932	0.00194793	SOX2.p2	AK312813|EGR2|1959|early growth response 2	NM_001136178|EGR2|1959|early growth response 2
hg18_v1_chr19_-_12641448_12641464	0.00194642	SOX2.p2	AF078861|C19orf56|51398|chromosome 19 open reading frame 56	AF151898|C19orf56|51398|chromosome 19 open reading frame 56	NM_016145|C19orf56|51398|chromosome 19 open reading frame 56
hg18_v1_chr8_+_12914143_12914143	0.00193283	SOX2.p2	AB040889|KIAA1456|57604|KIAA1456	NM_001099677|KIAA1456|57604|KIAA1456
hg18_v1_chr10_+_90414125_90414195	0.00192895	SOX2.p2	NM_001198828|LIPF|8513|lipase, gastric	NM_001198829|LIPF|8513|lipase, gastric	NM_001198830|LIPF|8513|lipase, gastric	NM_004190|LIPF|8513|lipase, gastric	AK301310|LIPF|8513|lipase, gastric	AK301320|LIPF|8513|lipase, gastric	AK308224|LIPF|8513|lipase, gastric	AK310128|LIPF|8513|lipase, gastric	AK312940|LIPF|8513|lipase, gastric	AK223468|LIPF|8513|lipase, gastric	AL833751|LIPF|8513|lipase, gastric	X05997|LIPF|8513|lipase, gastric
hg18_v1_chr7_+_71937980_71938091	0.00191655	SOX2.p2	CR607512|SBDSP1|155370|Shwachman-Bodian-Diamond syndrome pseudogene 1	CR607679|SBDSP1|155370|Shwachman-Bodian-Diamond syndrome pseudogene 1	CR599716|SBDSP1|155370|Shwachman-Bodian-Diamond syndrome pseudogene 1	BC010183|SBDSP1|155370|Shwachman-Bodian-Diamond syndrome pseudogene 1	CR610804|SBDSP1|155370|Shwachman-Bodian-Diamond syndrome pseudogene 1
hg18_v1_chr19_-_48815572_48815607	0.00191602	SOX2.p2	BC015950|ZNF428|126299|zinc finger protein 428	AY257197|ZNF428|126299|zinc finger protein 428	BC045799|ZNF428|126299|zinc finger protein 428
hg18_v1_chr15_+_36331411_36331963	0.0019123	SOX2.p2	AK091222|SPRED1|161742|sprouty-related, EVH1 domain containing 1	BC137480|SPRED1|161742|sprouty-related, EVH1 domain containing 1	BC137481|SPRED1|161742|sprouty-related, EVH1 domain containing 1
hg18_v1_chr3_-_95264756_95264756	0.00190657	SOX2.p2	AK122674|DHFRL1|200895|dihydrofolate reductase-like 1	NM_001195643|DHFRL1|200895|dihydrofolate reductase-like 1
hg18_v1_chr12_-_100748640_100748794	0.00190579	SOX2.p2	AK056137|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	BC131787|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	BC071687|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	AY687932|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	BC002779|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	BC094884|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	AM085438|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	NM_024312|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits
hg18_v1_chr1_-_1667123_1667353	0.0019031	SOX2.p2	BC062371|SLC35E2|9906|solute carrier family 35, member E2	CR591109|SLC35E2|9906|solute carrier family 35, member E2	AL049665|SLC35E2|9906|solute carrier family 35, member E2	NM_182838|SLC35E2|9906|solute carrier family 35, member E2	BC110653|SLC35E2B|728661|solute carrier family 35, member E2B
hg18_v1_chr3_-_130641470_130641506	0.00190004	SOX2.p2	AF114784|MBD4|8930|methyl-CpG binding domain protein 4
hg18_v1_chr7_-_130443379_130443425	0.00189634	SOX2.p2	BC047367|FLJ43663|378805|hypothetical LOC378805	CR622681|FLJ43663|378805|hypothetical LOC378805
hg18_v1_chr6_-_30748760_30748808	0.00188274	SOX2.p2	AK302721|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16	NM_001164239|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16	NM_003587|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16
hg18_v1_chr2_-_210888010_210888158	0.00187914	SOX2.p2	CR456869|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast	NM_079420|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast	AK311942|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast
hg18_v1_chr5_+_86599800_86599845	0.00187608	SOX2.p2	AB209106|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1	BC033015|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1
hg18_v1_chr18_+_66107222_66107260	0.00187478	SOX2.p2	BC020082|SOCS6|9306|suppressor of cytokine signaling 6
hg18_v1_chr2_+_61146866_61146866	0.001865	SOX2.p2	BC070104|KIAA1841|84542|KIAA1841	NM_032506|KIAA1841|84542|KIAA1841
hg18_v1_chr3_+_198961160_198961246	0.00184908	SOX2.p2	AL136558|FYTTD1|84248|forty-two-three domain containing 1	AK315019|FYTTD1|84248|forty-two-three domain containing 1	AJ344094|FYTTD1|84248|forty-two-three domain containing 1	AK296283|FYTTD1|84248|forty-two-three domain containing 1	AM393053|FYTTD1|84248|forty-two-three domain containing 1	CR533502|FYTTD1|84248|forty-two-three domain containing 1
hg18_v1_chr5_+_70980724_70980762	0.00184071	SOX2.p2	AK025591|MCCC2|64087|methylcrotonoyl-CoA carboxylase 2 (beta)
hg18_v1_chr7_-_135083906_135084133	0.0018399	SOX2.p2	BC137311|FAM180A|389558|family with sequence similarity 180, member A	BC137312|FAM180A|389558|family with sequence similarity 180, member A	AK297754|FAM180A|389558|family with sequence similarity 180, member A	AY358803|FAM180A|389558|family with sequence similarity 180, member A	AK290250|FAM180A|389558|family with sequence similarity 180, member A	AK310180|FAM180A|389558|family with sequence similarity 180, member A	NM_205855|FAM180A|389558|family with sequence similarity 180, member A
hg18_v1_chr14_-_106084085_106084503	0.00183948	SOX2.p2	AY623427|IGHV4-31|28396|immunoglobulin heavy variable 4-31	BC090938|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)
hg18_v1_chr19_+_18391211_18391240	0.00183771	SOX2.p2	NM_001009998|SSBP4|170463|single stranded DNA binding protein 4	NM_032627|SSBP4|170463|single stranded DNA binding protein 4	BC000274|SSBP4|170463|single stranded DNA binding protein 4	CR608876|SSBP4|170463|single stranded DNA binding protein 4	AK098429|SSBP4|170463|single stranded DNA binding protein 4
hg18_v1_chr15_-_40570585_40570648	0.00182747	SOX2.p2	AK226132|ZFP106|64397|zinc finger protein 106 homolog (mouse)	AK302735|ZFP106|64397|zinc finger protein 106 homolog (mouse)
hg18_v1_chr15_-_81006240_81006342	0.00182632	SOX2.p2	BC009407|RPS17|6218|ribosomal protein S17	BC020453|RPS17|6218|ribosomal protein S17	BC019899|RPS17|6218|ribosomal protein S17	CR618357|RPS17|6218|ribosomal protein S17	BC071928|RPS17|6218|ribosomal protein S17	M13932|RPS17|6218|ribosomal protein S17	AK311951|RPS17|6218|ribosomal protein S17	BC070222|RPS17|6218|ribosomal protein S17	BC022370|RPS17|6218|ribosomal protein S17	NM_001021|RPS17|6218|ribosomal protein S17	BC062715|RPS17|6218|ribosomal protein S17
hg18_v1_chr19_+_3831617_3831653	0.0018232	SOX2.p2	NM_033064|ATCAY|85300|ataxia, cerebellar, Cayman type
hg18_v1_chrX_-_74659572_74659590	0.00182127	SOX2.p2	
hg18_v1_chr1_+_10995265_10995330	0.00181954	SOX2.p2	NM_007375|TARDBP|23435|TAR DNA binding protein	AK299454|TARDBP|23435|TAR DNA binding protein	AK312416|TARDBP|23435|TAR DNA binding protein	BC001487|TARDBP|23435|TAR DNA binding protein	BC095435|TARDBP|23435|TAR DNA binding protein	BC071657|TARDBP|23435|TAR DNA binding protein	AL050265|TARDBP|23435|TAR DNA binding protein	AK222754|TARDBP|23435|TAR DNA binding protein	AK295920|TARDBP|23435|TAR DNA binding protein
hg18_v1_chr1_-_153560532_153560600	0.00181902	SOX2.p2	BC080538|C1orf104|284618|chromosome 1 open reading frame 104	NM_001039517|C1orf104|284618|chromosome 1 open reading frame 104	BC062571|C1orf104|284618|chromosome 1 open reading frame 104
hg18_v1_chr4_-_120769275_120769428	0.00179584	SOX2.p2	AM393036|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AM393270|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AM393448|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AK290189|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	BC126233|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AJ004865|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AF155192|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AF043731|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	NM_001083|PDE5A|8654|phosphodiesterase 5A, cGMP-specific
hg18_v1_chr2_-_86276015_86276101	0.00179521	SOX2.p2	CR456793|IMMT|10989|inner membrane protein, mitochondrial	EU831472|IMMT|10989|inner membrane protein, mitochondrial	EU831559|IMMT|10989|inner membrane protein, mitochondrial	AY232292|IMMT|10989|inner membrane protein, mitochondrial	AK300017|IMMT|10989|inner membrane protein, mitochondrial	BC002412|IMMT|10989|inner membrane protein, mitochondrial	AK296676|IMMT|10989|inner membrane protein, mitochondrial	AY921637|IMMT|10989|inner membrane protein, mitochondrial	AK312251|IMMT|10989|inner membrane protein, mitochondrial	AK299014|IMMT|10989|inner membrane protein, mitochondrial	AK309004|IMMT|10989|inner membrane protein, mitochondrial	CR610445|IMMT|10989|inner membrane protein, mitochondrial	AK225780|IMMT|10989|inner membrane protein, mitochondrial	AK304197|IMMT|10989|inner membrane protein, mitochondrial	BC005983|IMMT|10989|inner membrane protein, mitochondrial	BC107419|IMMT|10989|inner membrane protein, mitochondrial	D21091|IMMT|10989|inner membrane protein, mitochondrial	D21094|IMMT|10989|inner membrane protein, mitochondrial
hg18_v1_chr7_+_139124502_139124515	0.0017893	SOX2.p2	BC014117|TBXAS1|6916|thromboxane A synthase 1 (platelet)	NM_001130966|TBXAS1|6916|thromboxane A synthase 1 (platelet)	NM_001166254|TBXAS1|6916|thromboxane A synthase 1 (platelet)
hg18_v1_chr14_-_49652944_49653097	0.00178851	SOX2.p2	AK129564|METTL21D|79609|methyltransferase like 21D	CR597030|METTL21D|79609|methyltransferase like 21D	BX247997|METTL21D|79609|methyltransferase like 21D	BC027585|METTL21D|79609|methyltransferase like 21D	AK023982|METTL21D|79609|methyltransferase like 21D	NM_001040662|METTL21D|79609|methyltransferase like 21D	NM_024558|METTL21D|79609|methyltransferase like 21D	BC105118|METTL21D|79609|methyltransferase like 21D	BC143673|METTL21D|79609|methyltransferase like 21D	BC143674|METTL21D|79609|methyltransferase like 21D
hg18_v1_chr1_+_107400789_107400988	0.00178519	SOX2.p2	NM_018137|PRMT6|55170|protein arginine methyltransferase 6	BC073866|PRMT6|55170|protein arginine methyltransferase 6	AK226009|PRMT6|55170|protein arginine methyltransferase 6	AK295541|PRMT6|55170|protein arginine methyltransferase 6	AK297898|PRMT6|55170|protein arginine methyltransferase 6	AY043278|PRMT6|55170|protein arginine methyltransferase 6	CR621406|PRMT6|55170|protein arginine methyltransferase 6	BC013866|PRMT6|55170|protein arginine methyltransferase 6	AK001421|PRMT6|55170|protein arginine methyltransferase 6	BC002729|PRMT6|55170|protein arginine methyltransferase 6	BC063446|PRMT6|55170|protein arginine methyltransferase 6
hg18_v1_chr9_+_134884627_134884655	0.00177745	SOX2.p2	BC070500|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	X03689|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1
hg18_v1_chr17_+_632356_632415	0.00177251	SOX2.p2	BC011550|RNMTL1|55178|RNA methyltransferase like 1	BC050614|RNMTL1|55178|RNA methyltransferase like 1	AK225128|RNMTL1|55178|RNA methyltransferase like 1	CR606431|RNMTL1|55178|RNA methyltransferase like 1	CR606252|RNMTL1|55178|RNA methyltransferase like 1	CR610396|RNMTL1|55178|RNA methyltransferase like 1	CR598330|RNMTL1|55178|RNA methyltransferase like 1	CR626756|RNMTL1|55178|RNA methyltransferase like 1	CR610400|RNMTL1|55178|RNA methyltransferase like 1	CR593905|RNMTL1|55178|RNA methyltransferase like 1	CR590735|RNMTL1|55178|RNA methyltransferase like 1
hg18_v1_chr1_+_171950759_171950854	0.00177087	SOX2.p2	AB026190|KLHL20|27252|kelch-like 20 (Drosophila)	BC063418|KLHL20|27252|kelch-like 20 (Drosophila)
hg18_v1_chrX_+_53466529_53466614	0.0017556	SOX2.p2	AK304179|RIBC1|158787|RIB43A domain with coiled-coils 1	AK057345|RIBC1|158787|RIB43A domain with coiled-coils 1	NM_144968|RIBC1|158787|RIB43A domain with coiled-coils 1	AK292871|RIBC1|158787|RIB43A domain with coiled-coils 1	AK290346|RIBC1|158787|RIB43A domain with coiled-coils 1	BC036767|RIBC1|158787|RIB43A domain with coiled-coils 1	NM_001031745|RIBC1|158787|RIB43A domain with coiled-coils 1
hg18_v1_chr8_+_30072463_30072507	0.0017546	SOX2.p2	NM_001128208|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	NM_015344|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	BC000642|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	AF063605|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	AY277595|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	AY358674|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	CR605624|LEPROTL1|23484|leptin receptor overlapping transcript-like 1
hg18_v1_chr1_+_61315516_61315533	0.00175078	SOX2.p2	AK299289|NFIA|4774|nuclear factor I/A	NM_001145511|NFIA|4774|nuclear factor I/A
hg18_v1_chr7_+_156496360_156496374	0.00173284	SOX2.p2	BC022831|LOC645249|645249|hypothetical LOC645249	BC033117|LOC645249|645249|hypothetical LOC645249
hg18_v1_chr3_-_185085362_185085383	0.00171736	SOX2.p2	BC003653|PARL|55486|presenilin associated, rhomboid-like
hg18_v1_chr9_+_139202874_139203020	0.00171092	SOX2.p2	NM_003731|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1	BC000864|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1	BC004118|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1	Z96932|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1	CR620508|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1	BT006766|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1	CR542238|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1	CR611889|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1	BC015827|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1
hg18_v1_chr7_-_156495985_156496130	0.00170122	SOX2.p2	AF107457|MNX1|3110|motor neuron and pancreas homeobox 1	NM_005515|MNX1|3110|motor neuron and pancreas homeobox 1	CR623223|MNX1|3110|motor neuron and pancreas homeobox 1
hg18_v1_chr6_-_33864863_33864875	0.00169372	SOX2.p2	BC051803|LEMD2|221496|LEM domain containing 2
hg18_v1_chr1_+_44451698_44451762	0.00168721	SOX2.p2	NM_001034023|DMAP1|55929|DNA methyltransferase 1 associated protein 1	NM_001034024|DMAP1|55929|DNA methyltransferase 1 associated protein 1	NM_019100|DMAP1|55929|DNA methyltransferase 1 associated protein 1	AL136657|DMAP1|55929|DNA methyltransferase 1 associated protein 1	AK300372|DMAP1|55929|DNA methyltransferase 1 associated protein 1	BC002855|DMAP1|55929|DNA methyltransferase 1 associated protein 1	AK300442|DMAP1|55929|DNA methyltransferase 1 associated protein 1	AK293598|DMAP1|55929|DNA methyltransferase 1 associated protein 1	AK021605|DMAP1|55929|DNA methyltransferase 1 associated protein 1	AK289366|DMAP1|55929|DNA methyltransferase 1 associated protein 1	AK298793|DMAP1|55929|DNA methyltransferase 1 associated protein 1	AB037846|DMAP1|55929|DNA methyltransferase 1 associated protein 1	AL137200|DMAP1|55929|DNA methyltransferase 1 associated protein 1	BC008053|DMAP1|55929|DNA methyltransferase 1 associated protein 1	AK300217|DMAP1|55929|DNA methyltransferase 1 associated protein 1
hg18_v1_chr2_-_241408296_241408397	0.00167148	SOX2.p2	NM_004321|KIF1A|547|kinesin family member 1A	BC064906|KIF1A|547|kinesin family member 1A	AK307119|KIF1A|547|kinesin family member 1A	AB210029|KIF1A|547|kinesin family member 1A	AB290172|KIF1A|547|kinesin family member 1A
hg18_v1_chrX_-_119486874_119487030	0.00165727	SOX2.p2	AK304405|LAMP2|3920|lysosomal-associated membrane protein 2
hg18_v1_chr10_-_104252394_104252501	0.00162186	SOX2.p2	AM393135|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	DQ892689|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	DQ895934|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	BC026016|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	CR610318|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	BC000693|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	CR600058|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	Z14978|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	X82206|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK302072|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK312506|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK297362|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK297620|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	NM_005736|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)
hg18_v1_chr14_-_66896167_66896472	0.00160024	SOX2.p2	CR598234|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	BC001411|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	CR614271|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	AF104629|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	CR591270|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	CR590079|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	CR619369|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	CR621010|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	CR600453|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	BC031002|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	AK315784|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	CR613083|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	AK001155|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	CR626788|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	CR603153|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	AF145316|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	AF077614|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	AF100741|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	BC025373|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	NM_015994|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D
hg18_v1_chr1_+_78217510_78217611	0.00158412	SOX2.p2	AK297985|DNAJB4|11080|DnaJ (Hsp40) homolog, subfamily B, member 4
hg18_v1_chr2_+_12775336_12775398	0.00158269	SOX2.p2	AK313237|TRIB2|28951|tribbles homolog 2 (Drosophila)	BC002637|TRIB2|28951|tribbles homolog 2 (Drosophila)
hg18_v1_chr6_-_108688918_108688945	0.00157817	SOX2.p2	CR601831|SNX3|8724|sorting nexin 3	BC015179|SNX3|8724|sorting nexin 3	BC014580|SNX3|8724|sorting nexin 3	AK289476|SNX3|8724|sorting nexin 3
hg18_v1_chr6_-_88356445_88356472	0.00157486	SOX2.p2	NM_020320|RARS2|57038|arginyl-tRNA synthetase 2, mitochondrial
hg18_v1_chr14_+_66896824_66896829	0.00156318	SOX2.p2	CR618395|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
hg18_v1_chr12_-_70343656_70343699	0.00156082	SOX2.p2	
hg18_v1_chr1_+_61315378_61315510	0.00154705	SOX2.p2	
hg18_v1_chr19_+_18124998_18125066	0.00154684	SOX2.p2	BC070082|PIK3R2|5296|phosphoinositide-3-kinase, regulatory subunit 2 (beta)	NM_005027|PIK3R2|5296|phosphoinositide-3-kinase, regulatory subunit 2 (beta)	BC090249|PIK3R2|5296|phosphoinositide-3-kinase, regulatory subunit 2 (beta)
hg18_v1_chr16_+_31632065_31632068	0.00152823	SOX2.p2	AL832197|ZNF720|124411|zinc finger protein 720
hg18_v1_chr6_-_38778849_38778858	0.00151973	SOX2.p2	BC015934|GLO1|2739|glyoxalase I	CR625986|GLO1|2739|glyoxalase I
hg18_v1_chr6_-_42821815_42821892	0.00151748	SOX2.p2	NM_003192|TBCC|6903|tubulin folding cofactor C
hg18_v1_chr6_+_37895244_37895293	0.00151133	SOX2.p2	NM_021943|ZFAND3|60685|zinc finger, AN1-type domain 3
hg18_v1_chr6_-_74286876_74286906	0.00151008	SOX2.p2	AY043301|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1
hg18_v1_chr1_-_1614005_1614031	0.00150568	SOX2.p2	BC092507|SLC35E2B|728661|solute carrier family 35, member E2B	AK125619|SLC35E2B|728661|solute carrier family 35, member E2B
hg18_v1_chr1_-_222100296_222100338	0.00150471	SOX2.p2	NM_001031685|TP53BP2|7159|tumor protein p53 binding protein, 2	NM_005426|TP53BP2|7159|tumor protein p53 binding protein, 2
hg18_v1_chr3_+_48931248_48931272	0.00150312	SOX2.p2	AK223550|ARIH2|10425|ariadne homolog 2 (Drosophila)
hg18_v1_chr11_-_118477739_118477798	0.00147514	SOX2.p2	AK225994|DPAGT1|1798|dolichyl-phosphate (UDP-N-acetylglucosamine) N-acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)	BC000325|DPAGT1|1798|dolichyl-phosphate (UDP-N-acetylglucosamine) N-acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)	BC047771|DPAGT1|1798|dolichyl-phosphate (UDP-N-acetylglucosamine) N-acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)	CR603487|DPAGT1|1798|dolichyl-phosphate (UDP-N-acetylglucosamine) N-acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)	AK301973|DPAGT1|1798|dolichyl-phosphate (UDP-N-acetylglucosamine) N-acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)	AK312783|DPAGT1|1798|dolichyl-phosphate (UDP-N-acetylglucosamine) N-acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)
hg18_v1_chr10_-_14412813_14412900	0.00147354	SOX2.p2	AK289693|FRMD4A|55691|FERM domain containing 4A	NM_018027|FRMD4A|55691|FERM domain containing 4A	AB037715|FRMD4A|55691|FERM domain containing 4A	BC151244|FRMD4A|55691|FERM domain containing 4A
hg18_v1_chr12_-_9651748_9651778	0.00146878	SOX2.p2	BC027885|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1	BC113997|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1	BC114516|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1	U11276|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1	NM_002258|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1	AK292022|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1
hg18_v1_chr10_-_128067001_128067041	0.00146822	SOX2.p2	AY358878|ADAM12|8038|ADAM metallopeptidase domain 12	AF023476|ADAM12|8038|ADAM metallopeptidase domain 12	AF023477|ADAM12|8038|ADAM metallopeptidase domain 12	AK127856|ADAM12|8038|ADAM metallopeptidase domain 12
hg18_v1_chr5_+_137231458_137231472	0.00145093	SOX2.p2	AF133820|MYOT|9499|myotilin	AK300076|MYOT|9499|myotilin	AK307620|MYOT|9499|myotilin	AK312733|MYOT|9499|myotilin	BC005376|MYOT|9499|myotilin	AF144477|MYOT|9499|myotilin
hg18_v1_chr1_-_1614040_1614114	0.00144525	SOX2.p2	AB007916|SLC35E2B|728661|solute carrier family 35, member E2B	NM_001110781|SLC35E2B|728661|solute carrier family 35, member E2B
hg18_v1_chr1_+_166461881_166461953	0.00142877	SOX2.p2	BC068098|SFT2D2|375035|SFT2 domain containing 2
hg18_v1_chr11_-_92570626_92570645	0.00142871	SOX2.p2	
hg18_v1_chr12_+_100795213_100795286	0.00141555	SOX2.p2	NM_018370|DRAM1|55332|DNA-damage regulated autophagy modulator 1	BC018435|DRAM1|55332|DNA-damage regulated autophagy modulator 1
hg18_v1_chr16_+_30326386_30326699	0.00140789	SOX2.p2	BC026192|ZNF771|51333|zinc finger protein 771	BC011870|ZNF771|51333|zinc finger protein 771
hg18_v1_chr22_-_16637238_16637430	0.00140281	SOX2.p2	CR600376|BID|637|BH3 interacting domain death agonist	BC022072|BID|637|BH3 interacting domain death agonist	NM_001196|BID|637|BH3 interacting domain death agonist	NM_197967|BID|637|BH3 interacting domain death agonist	CR611157|BID|637|BH3 interacting domain death agonist	EU678293|BID|637|BH3 interacting domain death agonist	EU678294|BID|637|BH3 interacting domain death agonist
hg18_v1_chr16_-_626293_626374	0.00140116	SOX2.p2	AK294482|C16orf13|84326|chromosome 16 open reading frame 13	AK295628|C16orf13|84326|chromosome 16 open reading frame 13	BC047118|C16orf13|84326|chromosome 16 open reading frame 13	AK057077|C16orf13|84326|chromosome 16 open reading frame 13	BC007207|C16orf13|84326|chromosome 16 open reading frame 13	NM_001040160|C16orf13|84326|chromosome 16 open reading frame 13	NM_001040161|C16orf13|84326|chromosome 16 open reading frame 13	NM_001040162|C16orf13|84326|chromosome 16 open reading frame 13	NM_001040165|C16orf13|84326|chromosome 16 open reading frame 13	NM_032366|C16orf13|84326|chromosome 16 open reading frame 13
hg18_v1_chr19_-_6230927_6231004	0.00139372	SOX2.p2	D14539|MLLT1|4298|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1	NM_005934|MLLT1|4298|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1
hg18_v1_chr9_-_122516399_122516678	0.00139199	SOX2.p2	AY358370|MEGF9|1955|multiple EGF-like-domains 9	AK295380|MEGF9|1955|multiple EGF-like-domains 9	NM_001080497|MEGF9|1955|multiple EGF-like-domains 9
hg18_v1_chr15_-_58558410_58558722	0.00138373	SOX2.p2	BC020918|NARG2|79664|NMDA receptor regulated 2	CR612429|NARG2|79664|NMDA receptor regulated 2	BC151844|NARG2|79664|NMDA receptor regulated 2	BC140894|NARG2|79664|NMDA receptor regulated 2	AF502591|NARG2|79664|NMDA receptor regulated 2	AK055752|NARG2|79664|NMDA receptor regulated 2	CR749852|NARG2|79664|NMDA receptor regulated 2	AY358546|NARG2|79664|NMDA receptor regulated 2	AL832046|NARG2|79664|NMDA receptor regulated 2	AK095389|NARG2|79664|NMDA receptor regulated 2	BX647873|NARG2|79664|NMDA receptor regulated 2	NM_001018089|NARG2|79664|NMDA receptor regulated 2	NM_024611|NARG2|79664|NMDA receptor regulated 2
hg18_v1_chr10_-_44775142_44775164	0.00137869	SOX2.p2	AK056518|LOC220980|220980|hypothetical LOC220980
hg18_v1_chrX_+_136476353_136476514	0.0013736	SOX2.p2	EU532020|ZIC3|7547|Zic family member 3 (odd-paired homolog, Drosophila)	BC113393|ZIC3|7547|Zic family member 3 (odd-paired homolog, Drosophila)	BC113395|ZIC3|7547|Zic family member 3 (odd-paired homolog, Drosophila)
hg18_v1_chr3_-_157755603_157755671	0.0013729	SOX2.p2	CR597465|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)	AF087907|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)	AF110647|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)	BC017203|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)	NM_007107|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)
hg18_v1_chr13_+_23451919_23451948	0.00136209	SOX2.p2	BX648244|SPATA13|221178|spermatogenesis associated 13
hg18_v1_chr21_-_39607415_39607463	0.00135444	SOX2.p2	BC064602|BRWD1|54014|bromodomain and WD repeat domain containing 1	NM_001007246|BRWD1|54014|bromodomain and WD repeat domain containing 1	NM_018963|BRWD1|54014|bromodomain and WD repeat domain containing 1	NM_033656|BRWD1|54014|bromodomain and WD repeat domain containing 1	BC142986|BRWD1|54014|bromodomain and WD repeat domain containing 1
hg18_v1_chr1_-_156635879_156635879	0.0013502	SOX2.p2	NM_001004475|OR10T2|128360|olfactory receptor, family 10, subfamily T, member 2
hg18_v1_chr1_+_113417387_113417551	0.00133012	SOX2.p2	BC117368|LRIG2|9860|leucine-rich repeats and immunoglobulin-like domains 2	BC117370|LRIG2|9860|leucine-rich repeats and immunoglobulin-like domains 2
hg18_v1_chr19_+_57464659_57464678	0.00132239	SOX2.p2	BX538183|ZNF766|90321|zinc finger protein 766	EU832461|ZNF766|90321|zinc finger protein 766	EU832543|ZNF766|90321|zinc finger protein 766
hg18_v1_chr12_+_54721952_54721988	0.00129594	SOX2.p2	NM_001029|RPS26|6231|ribosomal protein S26	CR611958|RPS26|6231|ribosomal protein S26	BC002604|RPS26|6231|ribosomal protein S26
hg18_v1_chr13_+_33290254_33290315	0.00127929	SOX2.p2	AK296527|RFC3|5983|replication factor C (activator 1) 3, 38kDa	BC000149|RFC3|5983|replication factor C (activator 1) 3, 38kDa	AK222572|RFC3|5983|replication factor C (activator 1) 3, 38kDa	AK312544|RFC3|5983|replication factor C (activator 1) 3, 38kDa	L07541|RFC3|5983|replication factor C (activator 1) 3, 38kDa	DQ890955|RFC3|5983|replication factor C (activator 1) 3, 38kDa	DQ894118|RFC3|5983|replication factor C (activator 1) 3, 38kDa	BT019668|RFC3|5983|replication factor C (activator 1) 3, 38kDa
hg18_v1_chr7_-_26206845_26206888	0.00127137	SOX2.p2	BC000506|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1	M29064|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1	M29065|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1
hg18_v1_chr6_-_47385604_47385604	0.00125125	SOX2.p2	AK315560|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg18_v1_chr4_-_2233504_2233596	0.00124984	SOX2.p2	BT019969|MXD4|10608|MAX dimerization protein 4	BT019970|MXD4|10608|MAX dimerization protein 4	AF040963|MXD4|10608|MAX dimerization protein 4	AF082740|MXD4|10608|MAX dimerization protein 4	NM_006454|MXD4|10608|MAX dimerization protein 4	BC068060|MXD4|10608|MAX dimerization protein 4
hg18_v1_chr6_-_42821800_42821813	0.00123707	SOX2.p2	BC020170|TBCC|6903|tubulin folding cofactor C	AK312681|TBCC|6903|tubulin folding cofactor C	CR594940|TBCC|6903|tubulin folding cofactor C	CR609978|TBCC|6903|tubulin folding cofactor C	U61234|TBCC|6903|tubulin folding cofactor C
hg18_v1_chr14_+_66896813_66896822	0.00121794	SOX2.p2	D28379|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
hg18_v1_chrX_+_102078855_102078855	0.00120963	SOX2.p2	BC101169|RAB40AL|282808|RAB40A, member RAS oncogene family-like	BC101170|RAB40AL|282808|RAB40A, member RAS oncogene family-like	BC101171|RAB40AL|282808|RAB40A, member RAS oncogene family-like	BC101172|RAB40AL|282808|RAB40A, member RAS oncogene family-like	NM_001031834|RAB40AL|282808|RAB40A, member RAS oncogene family-like
hg18_v1_chr8_+_23442413_23442524	0.00119682	SOX2.p2	AK074708|SLC25A37|51312|solute carrier family 25, member 37	AK223194|SLC25A37|51312|solute carrier family 25, member 37	AF223466|SLC25A37|51312|solute carrier family 25, member 37	AY032628|SLC25A37|51312|solute carrier family 25, member 37	CR592142|SLC25A37|51312|solute carrier family 25, member 37	BC015013|SLC25A37|51312|solute carrier family 25, member 37	AK075313|SLC25A37|51312|solute carrier family 25, member 37	AL833186|SLC25A37|51312|solute carrier family 25, member 37
hg18_v1_chr2_-_3583793_3583799	0.00118594	SOX2.p2	BC002973|RNASEH1|246243|ribonuclease H1
hg18_v1_chrX_-_15782826_15782834	0.00118387	SOX2.p2	
hg18_v1_chr7_+_154943466_154943584	0.00118137	SOX2.p2	BC104970|EN2|2020|engrailed homeobox 2	BC104972|EN2|2020|engrailed homeobox 2	NM_001427|EN2|2020|engrailed homeobox 2
hg18_v1_chr6_-_90119329_90119684	0.00117328	SOX2.p2	NM_016021|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast)
hg18_v1_chr14_+_54046295_54046427	0.00116455	SOX2.p2	AK315318|CGRRF1|10668|cell growth regulator with ring finger domain 1	AK289478|CGRRF1|10668|cell growth regulator with ring finger domain 1	NM_006568|CGRRF1|10668|cell growth regulator with ring finger domain 1	BC015063|CGRRF1|10668|cell growth regulator with ring finger domain 1	CR601996|CGRRF1|10668|cell growth regulator with ring finger domain 1	U66469|CGRRF1|10668|cell growth regulator with ring finger domain 1	EU832831|CGRRF1|10668|cell growth regulator with ring finger domain 1	GQ129438|CGRRF1|10668|cell growth regulator with ring finger domain 1
hg18_v1_chr17_-_60088773_60088881	0.00116252	SOX2.p2	CR936721|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2	NM_022739|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2
hg18_v1_chr11_+_63463009_63463111	0.00114995	SOX2.p2	NM_024771|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)	AK023910|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)	AK300451|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)	AK303557|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)	BC041617|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)	BC052298|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)
hg18_v1_chr12_+_68265535_68265553	0.00114628	SOX2.p2	AF026293|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)
hg18_v1_chr1_+_28717349_28717390	0.00114322	SOX2.p2	BC069198|RCC1|1104|regulator of chromosome condensation 1
hg18_v1_chr3_+_185335503_185335519	0.00114278	SOX2.p2	BC053646|EIF2B5|8893|eukaryotic translation initiation factor 2B, subunit 5 epsilon, 82kDa	NM_003907|EIF2B5|8893|eukaryotic translation initiation factor 2B, subunit 5 epsilon, 82kDa	BC050476|EIF2B5|8893|eukaryotic translation initiation factor 2B, subunit 5 epsilon, 82kDa
hg18_v1_chr20_+_56989717_56989772	0.00113977	SOX2.p2	BC014952|TH1L|51497|TH1-like (Drosophila)	BX647417|TH1L|51497|TH1-like (Drosophila)	AJ238379|TH1L|51497|TH1-like (Drosophila)	AF161479|TH1L|51497|TH1-like (Drosophila)	AK023927|TH1L|51497|TH1-like (Drosophila)	AK023310|TH1L|51497|TH1-like (Drosophila)	CR615187|TH1L|51497|TH1-like (Drosophila)	AK001316|TH1L|51497|TH1-like (Drosophila)
hg18_v1_chr16_+_68353738_68353777	0.00113886	SOX2.p2	BC064531|WWP2|11060|WW domain containing E3 ubiquitin protein ligase 2	AJ001982|WWP2|11060|WW domain containing E3 ubiquitin protein ligase 2	NM_007014|WWP2|11060|WW domain containing E3 ubiquitin protein ligase 2	NM_199423|WWP2|11060|WW domain containing E3 ubiquitin protein ligase 2	U96114|WWP2|11060|WW domain containing E3 ubiquitin protein ligase 2
hg18_v1_chr15_+_53488014_53488160	0.00113369	SOX2.p2	NM_001198784|FLJ27352|145788|hypothetical LOC145788	AK130862|FLJ27352|145788|hypothetical LOC145788	BX648577|FLJ27352|145788|hypothetical LOC145788
hg18_v1_chr19_-_48815853_48815853	0.00112289	SOX2.p2	NM_182498|ZNF428|126299|zinc finger protein 428
hg18_v1_chr5_+_96296842_96296856	0.00110087	SOX2.p2	AK096804|LNPEP|4012|leucyl/cystinyl aminopeptidase
hg18_v1_chr10_-_123724698_123724802	0.00110083	SOX2.p2	AK308687|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	BC005212|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	AK000010|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	AK222487|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	AF258584|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	BC062427|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	NM_001167865|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	NM_017615|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)
hg18_v1_chr3_-_63984134_63984246	0.00110041	SOX2.p2	AF530062|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	CR591954|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	CR593438|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	CR606536|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	CR609059|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	BC000630|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	AK095059|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	AY568086|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	D14663|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	NM_014814|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	CR591399|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	CR614166|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	BC012369|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	BC000904|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	CR602355|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	AK290205|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	BX647742|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	AF215935|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	CR591251|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6
hg18_v1_chr6_-_42821790_42821799	0.00107955	SOX2.p2	CR591267|TBCC|6903|tubulin folding cofactor C
hg18_v1_chr2_-_86276102_86276231	0.0010778	SOX2.p2	BX537369|IMMT|10989|inner membrane protein, mitochondrial	L42572|IMMT|10989|inner membrane protein, mitochondrial
hg18_v1_chrX_-_74659596_74659604	0.00107376	SOX2.p2	AK128587|ZDHHC15|158866|zinc finger, DHHC-type containing 15	AK303896|ZDHHC15|158866|zinc finger, DHHC-type containing 15	AK056374|ZDHHC15|158866|zinc finger, DHHC-type containing 15	BC103980|ZDHHC15|158866|zinc finger, DHHC-type containing 15	BC103981|ZDHHC15|158866|zinc finger, DHHC-type containing 15	BC103982|ZDHHC15|158866|zinc finger, DHHC-type containing 15
hg18_v1_chr6_+_34312641_34312657	0.00106767	SOX2.p2	X14957|HMGA1|3159|high mobility group AT-hook 1	X14958|HMGA1|3159|high mobility group AT-hook 1	CR614979|HMGA1|3159|high mobility group AT-hook 1	AK308245|HMGA1|3159|high mobility group AT-hook 1
hg18_v1_chr12_-_48705427_48705573	0.00105044	SOX2.p2	BC024144|RACGAP1|29127|Rac GTPase activating protein 1	AB030251|RACGAP1|29127|Rac GTPase activating protein 1	AK000733|RACGAP1|29127|Rac GTPase activating protein 1	AL136794|RACGAP1|29127|Rac GTPase activating protein 1	BC032754|RACGAP1|29127|Rac GTPase activating protein 1	AK315785|RACGAP1|29127|Rac GTPase activating protein 1	NM_001126103|RACGAP1|29127|Rac GTPase activating protein 1	NM_001126104|RACGAP1|29127|Rac GTPase activating protein 1	NM_013277|RACGAP1|29127|Rac GTPase activating protein 1
hg18_v1_chr7_+_138676436_138676436	0.00104766	SOX2.p2	NM_197964|C7orf55|154791|chromosome 7 open reading frame 55
hg18_v1_chr12_+_43896099_43896133	0.00101337	SOX2.p2	AK303996|ANO6|196527|anoctamin 6
hg18_v1_chr5_-_172976196_172976210	0.00100895	SOX2.p2	BC003114|BOD1|91272|biorientation of chromosomes in cell division 1
hg18_v1_chr1_+_42920889_42920944	0.00100004	SOX2.p2	CR617953|YBX1|4904|Y box binding protein 1
hg18_v1_chr12_-_70343790_70343940	0.000967893	SOX2.p2	AB011118|ZFC3H1|196441|zinc finger, C3H1-type containing	BC073843|ZFC3H1|196441|zinc finger, C3H1-type containing	BC064336|ZFC3H1|196441|zinc finger, C3H1-type containing	BX647709|ZFC3H1|196441|zinc finger, C3H1-type containing	BC015679|ZFC3H1|196441|zinc finger, C3H1-type containing
hg18_v1_chr12_+_368774_368821	0.000963074	SOX2.p2	AK316029|CCDC77|84318|coiled-coil domain containing 77	NM_001130147|CCDC77|84318|coiled-coil domain containing 77	NM_001130148|CCDC77|84318|coiled-coil domain containing 77	AK308216|CCDC77|84318|coiled-coil domain containing 77
hg18_v1_chr8_-_95556460_95556531	0.000956908	SOX2.p2	BC001965|RAD54B|25788|RAD54 homolog B (S. cerevisiae)	CR602319|RAD54B|25788|RAD54 homolog B (S. cerevisiae)	AF112481|RAD54B|25788|RAD54 homolog B (S. cerevisiae)	BC020668|RAD54B|25788|RAD54 homolog B (S. cerevisiae)	NM_012415|RAD54B|25788|RAD54 homolog B (S. cerevisiae)	AK290437|RAD54B|25788|RAD54 homolog B (S. cerevisiae)
hg18_v1_chr19_+_45546369_45546492	0.000951859	SOX2.p2	CR595516|PLD3|23646|phospholipase D family, member 3	BC036327|PLD3|23646|phospholipase D family, member 3	CR623588|PLD3|23646|phospholipase D family, member 3	AK293690|PLD3|23646|phospholipase D family, member 3	BC096820|PLD3|23646|phospholipase D family, member 3
hg18_v1_chr7_-_93471463_93471638	0.000950913	SOX2.p2	BT009853|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	DQ894078|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	BC000899|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	CR749267|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	AF007551|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	CR605582|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	AK313984|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	BC012595|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	CR601371|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	NM_005868|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)
hg18_v1_chr14_+_95899541_95899594	0.000946934	SOX2.p2	CR608981|C14orf129|51527|chromosome 14 open reading frame 129
hg18_v1_chr7_-_42243142_42243142	0.000941052	SOX2.p2	NM_000168|GLI3|2737|GLI family zinc finger 3
hg18_v1_chr16_+_56054075_56054137	0.000938647	SOX2.p2	BC003159|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	AK300124|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	CR599625|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	CR620330|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	AK293112|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	BC028157|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	AJ224143|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	AJ224144|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	CR600374|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	CR615542|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	J05448|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	CR600258|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	CR606923|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	BC000409|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	CR620622|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	AF008443|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	CR542041|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	DQ891411|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	DQ894586|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	EU176305|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa
hg18_v1_chr15_-_97608922_97608957	0.000920724	SOX2.p2	AK023230|TTC23|64927|tetratricopeptide repeat domain 23	AK291690|TTC23|64927|tetratricopeptide repeat domain 23
hg18_v1_chr1_+_20081510_20081590	0.000903736	SOX2.p2	
hg18_v1_chr2_+_46779827_46779983	0.000892468	SOX2.p2	BC032862|SOCS5|9655|suppressor of cytokine signaling 5	AF073958|SOCS5|9655|suppressor of cytokine signaling 5	NM_144949|SOCS5|9655|suppressor of cytokine signaling 5
hg18_v1_chr12_+_68923043_68923076	0.000882603	SOX2.p2	NM_014515|CNOT2|4848|CCR4-NOT transcription complex, subunit 2	AK315715|CNOT2|4848|CCR4-NOT transcription complex, subunit 2
hg18_v1_chr1_+_234372454_234372545	0.000882344	SOX2.p2	BC012100|GPR137B|7107|G protein-coupled receptor 137B	NM_003272|GPR137B|7107|G protein-coupled receptor 137B	AK295408|GPR137B|7107|G protein-coupled receptor 137B	AK312908|GPR137B|7107|G protein-coupled receptor 137B	AK223632|GPR137B|7107|G protein-coupled receptor 137B	AK301552|GPR137B|7107|G protein-coupled receptor 137B	CR608564|GPR137B|7107|G protein-coupled receptor 137B	AF027826|GPR137B|7107|G protein-coupled receptor 137B	AY242135|GPR137B|7107|G protein-coupled receptor 137B	CR541770|GPR137B|7107|G protein-coupled receptor 137B
hg18_v1_chr3_-_18441763_18441840	0.000880879	SOX2.p2	AK127242|SATB1|6304|SATB homeobox 1	NM_001195470|SATB1|6304|SATB homeobox 1	NM_002971|SATB1|6304|SATB homeobox 1
hg18_v1_chr19_-_6410576_6410667	0.000874056	SOX2.p2	AK294514|SLC25A23|79085|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23
hg18_v1_chr12_+_132167057_132167119	0.000859235	SOX2.p2	NM_003440|ZNF140|7699|zinc finger protein 140
hg18_v1_chr12_+_97433462_97433535	0.000843891	SOX2.p2	NM_001032283|TMPO|7112|thymopoietin	NM_001032284|TMPO|7112|thymopoietin	NM_003276|TMPO|7112|thymopoietin	BC050383|TMPO|7112|thymopoietin	BC053675|TMPO|7112|thymopoietin
hg18_v1_chr17_-_44047299_44047299	0.000836367	SOX2.p2	AK096222|HOXB8|3218|homeobox B8	NM_024016|HOXB8|3218|homeobox B8
hg18_v1_chr17_+_26183074_26183148	0.000823592	SOX2.p2	AL832103|ATAD5|79915|ATPase family, AAA domain containing 5	BC015051|ATAD5|79915|ATPase family, AAA domain containing 5	AJ314648|ATAD5|79915|ATPase family, AAA domain containing 5	AY557611|ATAD5|79915|ATPase family, AAA domain containing 5	NM_024857|ATAD5|79915|ATPase family, AAA domain containing 5
hg18_v1_chr14_+_44674892_44674892	0.000798205	SOX2.p2	AK093422|FANCM|57697|Fanconi anemia, complementation group M
hg18_v1_chr1_+_87566738_87566752	0.000795845	SOX2.p2	NM_006769|LMO4|8543|LIM domain only 4	U24576|LMO4|8543|LIM domain only 4
hg18_v1_chr7_-_6832382_6832465	0.000793354	SOX2.p2	BC010130|C7orf28B|221960|chromosome 7 open reading frame 28B	CR595861|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	AK292326|C7orf28B|221960|chromosome 7 open reading frame 28B	BC132749|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	BC132751|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	BC067810|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	NM_198097|C7orf28B|221960|chromosome 7 open reading frame 28B
hg18_v1_chr22_-_16637221_16637225	0.00078874	SOX2.p2	BC009197|BID|637|BH3 interacting domain death agonist	AF087891|BID|637|BH3 interacting domain death agonist	AF042083|BID|637|BH3 interacting domain death agonist
hg18_v1_chr11_-_18566758_18566897	0.000786852	SOX2.p2	AK295501|UEVLD|55293|UEV and lactate/malate dehyrogenase domains	BC011011|UEVLD|55293|UEV and lactate/malate dehyrogenase domains	CR616778|UEVLD|55293|UEV and lactate/malate dehyrogenase domains	BC064566|UEVLD|55293|UEV and lactate/malate dehyrogenase domains	AF503350|UEVLD|55293|UEV and lactate/malate dehyrogenase domains	AK296835|UEVLD|55293|UEV and lactate/malate dehyrogenase domains	AK316191|UEVLD|55293|UEV and lactate/malate dehyrogenase domains	AK301537|UEVLD|55293|UEV and lactate/malate dehyrogenase domains	NM_001040697|UEVLD|55293|UEV and lactate/malate dehyrogenase domains	NM_018314|UEVLD|55293|UEV and lactate/malate dehyrogenase domains	AK314521|UEVLD|55293|UEV and lactate/malate dehyrogenase domains
hg18_v1_chr19_+_46595533_46595556	0.000786445	SOX2.p2	NM_000709|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	NM_001164783|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	CR626469|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide
hg18_v1_chr15_+_38648823_38649063	0.00076943	SOX2.p2	AK055971|RPUSD2|27079|RNA pseudouridylate synthase domain containing 2	AK301706|RPUSD2|27079|RNA pseudouridylate synthase domain containing 2	NM_152260|RPUSD2|27079|RNA pseudouridylate synthase domain containing 2	CR624718|RPUSD2|27079|RNA pseudouridylate synthase domain containing 2
hg18_v1_chr5_-_172976212_172976257	0.000767318	SOX2.p2	CR599483|BOD1|91272|biorientation of chromosomes in cell division 1	CR607873|BOD1|91272|biorientation of chromosomes in cell division 1	CR592937|BOD1|91272|biorientation of chromosomes in cell division 1	AK301982|BOD1|91272|biorientation of chromosomes in cell division 1
hg18_v1_chr15_-_63068824_63068900	0.000711913	SOX2.p2	AF212231|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	NM_001127889|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)
hg18_v1_chr11_-_61491684_61491763	0.000710041	SOX2.p2	CR608224|FTH1|2495|ferritin, heavy polypeptide 1	NM_002032|FTH1|2495|ferritin, heavy polypeptide 1
hg18_v1_chr11_+_94439703_94439929	0.000707541	SOX2.p2	NM_032102|SRSF8|10929|serine/arginine-rich splicing factor 8	AK312514|SRSF8|10929|serine/arginine-rich splicing factor 8	AK023379|SRSF8|10929|serine/arginine-rich splicing factor 8
hg18_v1_chr19_+_38263625_38263625	0.000704032	SOX2.p2	BC006108|GPATCH1|55094|G patch domain containing 1	NM_018025|GPATCH1|55094|G patch domain containing 1
hg18_v1_chr4_+_75242671_75242788	0.000679813	SOX2.p2	BC037529|MTHFD2L|441024|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like	NM_001144978|MTHFD2L|441024|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like	BC041943|MTHFD2L|441024|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like
hg18_v1_chr17_-_43328141_43328158	0.000676887	SOX2.p2	
hg18_v1_chr1_-_175400573_175400646	0.000664912	SOX2.p2	AK307820|ASTN1|460|astrotactin 1	AK295126|ASTN1|460|astrotactin 1	BC032870|ASTN1|460|astrotactin 1	BC049377|ASTN1|460|astrotactin 1	NM_004319|ASTN1|460|astrotactin 1	NM_207108|ASTN1|460|astrotactin 1
hg18_v1_chr12_+_27755028_27755055	0.000662397	SOX2.p2	BC015862|MRPS35|60488|mitochondrial ribosomal protein S35	AK075378|MRPS35|60488|mitochondrial ribosomal protein S35	AK075515|MRPS35|60488|mitochondrial ribosomal protein S35	BC109372|MRPS35|60488|mitochondrial ribosomal protein S35	CR612857|MRPS35|60488|mitochondrial ribosomal protein S35	BC063515|MRPS35|60488|mitochondrial ribosomal protein S35	CR595120|MRPS35|60488|mitochondrial ribosomal protein S35	CR624689|MRPS35|60488|mitochondrial ribosomal protein S35	BC028346|MRPS35|60488|mitochondrial ribosomal protein S35
hg18_v1_chrX_-_15782792_15782802	0.000645119	SOX2.p2	AF251295|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit
hg18_v1_chr16_+_31632031_31632064	0.000640121	SOX2.p2	NM_001130913|ZNF720|124411|zinc finger protein 720	BC055408|ZNF720|124411|zinc finger protein 720
hg18_v1_chr8_-_144313053_144313076	0.000636309	SOX2.p2	BC030192|LY6H|4062|lymphocyte antigen 6 complex, locus H	AB012293|LY6H|4062|lymphocyte antigen 6 complex, locus H
hg18_v1_chr3_+_171183203_171183212	0.000634647	SOX2.p2	CR596837|SEC62|7095|SEC62 homolog (S. cerevisiae)
hg18_v1_chr19_+_62483093_62483243	0.000630547	SOX2.p2	AK298106|ZNF460|10794|zinc finger protein 460
hg18_v1_chr9_-_85512311_85512427	0.000628152	SOX2.p2	CR612259|UBQLN1|29979|ubiquilin 1	AF176069|UBQLN1|29979|ubiquilin 1	AF293384|UBQLN1|29979|ubiquilin 1
hg18_v1_chr15_-_32833980_32834073	0.000626231	SOX2.p2	BC069131|GJD2|57369|gap junction protein, delta 2, 36kDa	BC069339|GJD2|57369|gap junction protein, delta 2, 36kDa	NM_020660|GJD2|57369|gap junction protein, delta 2, 36kDa	BC112110|GJD2|57369|gap junction protein, delta 2, 36kDa	BC112114|GJD2|57369|gap junction protein, delta 2, 36kDa	BC143788|GJD2|57369|gap junction protein, delta 2, 36kDa
hg18_v1_chr1_-_78217360_78217366	0.000606317	SOX2.p2	NM_003902|FUBP1|8880|far upstream element (FUSE) binding protein 1
hg18_v1_chr12_+_27754972_27755027	0.000598654	SOX2.p2	NM_001190864|MRPS35|60488|mitochondrial ribosomal protein S35	NM_021821|MRPS35|60488|mitochondrial ribosomal protein S35	AF182422|MRPS35|60488|mitochondrial ribosomal protein S35
hg18_v1_chr19_-_47155340_47155381	0.000588812	SOX2.p2	NM_006423|RABAC1|10567|Rab acceptor 1 (prenylated)
hg18_v1_chr14_+_66896840_66896900	0.000586867	SOX2.p2	J02645|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
hg18_v1_chr9_-_35062596_35062636	0.000586575	SOX2.p2	BC096751|VCP|7415|valosin containing protein	AK312310|VCP|7415|valosin containing protein	BC012195|VCP|7415|valosin containing protein	BC017171|VCP|7415|valosin containing protein
hg18_v1_chr1_+_149405128_149405257	0.000586423	SOX2.p2	AK301644|SCNM1|79005|sodium channel modifier 1	NM_024041|SCNM1|79005|sodium channel modifier 1	CR607615|SCNM1|79005|sodium channel modifier 1	AK056322|SCNM1|79005|sodium channel modifier 1	BC000264|SCNM1|79005|sodium channel modifier 1	DQ892531|SCNM1|79005|sodium channel modifier 1	DQ895742|SCNM1|79005|sodium channel modifier 1	CR620396|SCNM1|79005|sodium channel modifier 1
hg18_v1_chr16_+_65196031_65196119	0.000580177	SOX2.p2	BC047701|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3	NM_181553|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3	CR611794|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3	BC036042|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3	BC040227|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3
hg18_v1_chr5_+_137716285_137716383	0.000560138	SOX2.p2	BC146788|KDM3B|51780|lysine (K)-specific demethylase 3B	AB029005|KDM3B|51780|lysine (K)-specific demethylase 3B
hg18_v1_chr12_+_109046522_109046686	0.000560132	SOX2.p2	NM_001143779|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)	NM_014055|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)	NM_031473|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)	CR608549|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)	AF139540|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)	AF332010|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)	BC005396|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)	AF250326|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)	AK291043|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)	BC004536|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)
hg18_v1_chr3_+_95264513_95264555	0.000557045	SOX2.p2	CR594640|NSUN3|63899|NOP2/Sun domain family, member 3	AF169972|NSUN3|63899|NOP2/Sun domain family, member 3	BC018432|NSUN3|63899|NOP2/Sun domain family, member 3	BC020602|NSUN3|63899|NOP2/Sun domain family, member 3	BC057238|NSUN3|63899|NOP2/Sun domain family, member 3	NM_022072|NSUN3|63899|NOP2/Sun domain family, member 3	AK026262|NSUN3|63899|NOP2/Sun domain family, member 3
hg18_v1_chr19_+_46595563_46595584	0.000556939	SOX2.p2	AK313300|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	CR595459|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	AK298188|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	BC007878|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	CR601175|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	CR625376|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	BC008933|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	CR591555|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	CR620134|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	CR625203|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	AB209828|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	CR612929|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	CR592963|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	CR592078|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	CR626152|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	J04474|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	CR598478|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	CR604642|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	CR610394|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	CR618519|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	CR592674|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide
hg18_v1_chrX_+_24621964_24621978	0.000552795	SOX2.p2	BX648513|POLA1|5422|polymerase (DNA directed), alpha 1, catalytic subunit
hg18_v1_chrX_-_15782859_15782859	0.000548564	SOX2.p2	AK130075|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit
hg18_v1_chr6_-_137582244_137582259	0.000543404	SOX2.p2	NM_000416|IFNGR1|3459|interferon gamma receptor 1
hg18_v1_chr19_+_57464635_57464657	0.000542415	SOX2.p2	BX648899|ZNF766|90321|zinc finger protein 766	NM_001010851|ZNF766|90321|zinc finger protein 766	BC136833|ZNF766|90321|zinc finger protein 766	BC136834|ZNF766|90321|zinc finger protein 766	AK024074|ZNF766|90321|zinc finger protein 766
hg18_v1_chr21_-_30791298_30791342	0.000533319	SOX2.p2	NM_181610|KRTAP19-4|337971|keratin associated protein 19-4	AB096945|KRTAP19-4|337971|keratin associated protein 19-4	BC117197|KRTAP19-4|337971|keratin associated protein 19-4	BC117199|KRTAP19-4|337971|keratin associated protein 19-4
hg18_v1_chr19_-_63353956_63353965	0.000532897	SOX2.p2	BC047501|ZNF329|79673|zinc finger protein 329	NM_024620|ZNF329|79673|zinc finger protein 329	AK095349|ZNF329|79673|zinc finger protein 329	AK096542|ZNF329|79673|zinc finger protein 329
hg18_v1_chr8_+_133856793_133856855	0.000518197	SOX2.p2	AK290506|PHF20L1|51105|PHD finger protein 20-like 1	CR623764|PHF20L1|51105|PHD finger protein 20-like 1	BC002822|PHF20L1|51105|PHD finger protein 20-like 1	BC015211|PHF20L1|51105|PHD finger protein 20-like 1
hg18_v1_chr1_-_152422261_152422264	0.000497882	SOX2.p2	BC015403|TPM3|7170|tropomyosin 3	CR589996|TPM3|7170|tropomyosin 3
hg18_v1_chr5_+_156625629_156626032	0.000492824	SOX2.p2	AL136549|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	NM_001037333|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	AK294220|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	AK295865|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	AK297401|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	AK303702|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	CR596909|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	AB032994|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	AF160973|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	NM_001037332|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2
hg18_v1_chr1_-_37792414_37792541	0.000476508	SOX2.p2	AY081909|SNIP1|79753|Smad nuclear interacting protein 1	AK297176|SNIP1|79753|Smad nuclear interacting protein 1	AK300796|SNIP1|79753|Smad nuclear interacting protein 1	AK027622|SNIP1|79753|Smad nuclear interacting protein 1	AK022615|SNIP1|79753|Smad nuclear interacting protein 1	BC027040|SNIP1|79753|Smad nuclear interacting protein 1	NM_024700|SNIP1|79753|Smad nuclear interacting protein 1	AK293229|SNIP1|79753|Smad nuclear interacting protein 1	AK315574|SNIP1|79753|Smad nuclear interacting protein 1
hg18_v1_chr14_+_66896830_66896838	0.000472775	SOX2.p2	BC002513|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa	CR600389|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa	CR604321|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
hg18_v1_chr3_+_23961739_23961899	0.000470606	SOX2.p2	NM_005126|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2	D16815|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2	AK313464|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2	BC045613|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2	CR602304|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2	BC070035|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2
hg18_v1_chr19_-_41601303_41601419	0.000466885	SOX2.p2	AK315709|ZFP82|284406|zinc finger protein 82 homolog (mouse)	GU388429|ZFP82|284406|zinc finger protein 82 homolog (mouse)	AL834267|ZFP82|284406|zinc finger protein 82 homolog (mouse)	NM_133466|ZFP82|284406|zinc finger protein 82 homolog (mouse)	AK074942|ZFP82|284406|zinc finger protein 82 homolog (mouse)
hg18_v1_chr7_-_26206889_26206890	0.000466459	SOX2.p2	AK129839|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1	AK289429|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1
hg18_v1_chr19_+_46595558_46595562	0.000465579	SOX2.p2	CR620302|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	AL833143|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	BC023983|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	Z14093|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide
hg18_v1_chr5_+_140780720_140780786	0.000445302	SOX2.p2	NM_018914|PCDHGA11|56105|protocadherin gamma subfamily A, 11	NM_032091|PCDHGA11|56105|protocadherin gamma subfamily A, 11	NM_032092|PCDHGA11|56105|protocadherin gamma subfamily A, 11
hg18_v1_chr2_+_152900076_152900362	0.000422594	SOX2.p2	BC113878|FMNL2|114793|formin-like 2	BC114438|FMNL2|114793|formin-like 2	AB067489|FMNL2|114793|formin-like 2	BC167159|FMNL2|114793|formin-like 2
hg18_v1_chr6_-_88356385_88356409	0.000417554	SOX2.p2	AF143874|RARS2|57038|arginyl-tRNA synthetase 2, mitochondrial	CR611793|RARS2|57038|arginyl-tRNA synthetase 2, mitochondrial	BC105784|RARS2|57038|arginyl-tRNA synthetase 2, mitochondrial	CR625441|RARS2|57038|arginyl-tRNA synthetase 2, mitochondrial	AK315669|RARS2|57038|arginyl-tRNA synthetase 2, mitochondrial
hg18_v1_chr15_+_72006015_72006173	0.000401959	SOX2.p2	DQ893331|LOXL1|4016|lysyl oxidase-like 1
hg18_v1_chr11_+_125678856_125678856	0.000399288	SOX2.p2	AF532613|DCPS|28960|decapping enzyme, scavenger	NM_014026|DCPS|28960|decapping enzyme, scavenger
hg18_v1_chr7_-_33068699_33068996	0.000399181	SOX2.p2	AF151067|NT5C3|51251|5'-nucleotidase, cytosolic III	BC013292|NT5C3|51251|5'-nucleotidase, cytosolic III	CR533518|NT5C3|51251|5'-nucleotidase, cytosolic III	AM393481|NT5C3|51251|5'-nucleotidase, cytosolic III	BC066914|NT5C3|51251|5'-nucleotidase, cytosolic III	AF312735|NT5C3|51251|5'-nucleotidase, cytosolic III	AK290118|NT5C3|51251|5'-nucleotidase, cytosolic III	AL136716|NT5C3|51251|5'-nucleotidase, cytosolic III	BC071652|NT5C3|51251|5'-nucleotidase, cytosolic III	AK314109|NT5C3|51251|5'-nucleotidase, cytosolic III	NM_001002010|NT5C3|51251|5'-nucleotidase, cytosolic III
hg18_v1_chr1_-_13204251_13204278	0.000393775	SOX2.p2	NM_001100631|PRAMEF22|653606|PRAME family member 22	NM_001013692|PRAMEF3|401940|PRAME family member 3
hg18_v1_chr11_-_6148131_6148213	0.000370654	SOX2.p2	NM_001004052|OR52B2|255725|olfactory receptor, family 52, subfamily B, member 2	BC136732|OR52B2|255725|olfactory receptor, family 52, subfamily B, member 2	BC136733|OR52B2|255725|olfactory receptor, family 52, subfamily B, member 2
hg18_v1_chr6_-_105414440_105414471	0.000368792	SOX2.p2	BC038119|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1	BC034982|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1
hg18_v1_chr3_+_42952855_42952887	0.000368113	SOX2.p2	BC062786|KRBOX1|100506243|KRAB box domain containing 1	AK130974|KRBOX1|100506243|KRAB box domain containing 1
hg18_v1_chr12_+_119647953_119648071	0.000361001	SOX2.p2	NM_000017|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain	CR596637|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain	BC025963|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain	CR608104|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain	CR615642|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain	CR613518|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain	CR600438|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain	CR607224|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain	CR606773|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain	AK300645|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain	M26393|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain	CR604877|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain	DQ892184|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain	DQ895378|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain	AB527081|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain
hg18_v1_chr4_-_149582754_149582825	0.000357333	SOX2.p2	BC111758|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2
hg18_v1_chr4_-_166253453_166253497	0.000353693	SOX2.p2	CR590819|TMEM192|201931|transmembrane protein 192	NM_001100389|TMEM192|201931|transmembrane protein 192
hg18_v1_chr2_-_3583801_3583833	0.000353331	SOX2.p2	AF039652|RNASEH1|246243|ribonuclease H1	CR596638|RNASEH1|246243|ribonuclease H1	NM_002936|RNASEH1|246243|ribonuclease H1	CR594242|RNASEH1|246243|ribonuclease H1
hg18_v1_chr6_+_126112588_126112615	0.00035186	SOX2.p2	AF311884|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2	BT020067|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2	BT020068|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2
hg18_v1_chrX_-_15782803_15782812	0.000344642	SOX2.p2	BC001117|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit	BC071867|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit
hg18_v1_chr10_+_103995297_103995417	0.000341027	SOX2.p2	AF068755|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1	NM_004193|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1	D87435|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1	BC117681|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1	BC117682|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1
hg18_v1_chr11_+_36572615_36572746	0.000334793	SOX2.p2	AK290833|C11orf74|119710|chromosome 11 open reading frame 74	DQ121386|C11orf74|119710|chromosome 11 open reading frame 74	CR618125|C11orf74|119710|chromosome 11 open reading frame 74	AK095997|C11orf74|119710|chromosome 11 open reading frame 74	AK299642|C11orf74|119710|chromosome 11 open reading frame 74	BC009561|C11orf74|119710|chromosome 11 open reading frame 74	CR612900|C11orf74|119710|chromosome 11 open reading frame 74	BC051031|C11orf74|119710|chromosome 11 open reading frame 74	NM_138787|C11orf74|119710|chromosome 11 open reading frame 74	AK302634|C11orf74|119710|chromosome 11 open reading frame 74
hg18_v1_chr12_-_70343943_70344015	0.000324243	SOX2.p2	NM_144982|ZFC3H1|196441|zinc finger, C3H1-type containing
hg18_v1_chr22_+_37740232_37740312	0.000312478	SOX2.p2	CR456394|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C	AB208979|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C	CU012952|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C	CU013240|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C
hg18_v1_chr14_+_49304533_49304641	0.000305913	SOX2.p2	NM_014315|KLHDC2|23588|kelch domain containing 2	CR594220|KLHDC2|23588|kelch domain containing 2	CR597789|KLHDC2|23588|kelch domain containing 2	CR622573|KLHDC2|23588|kelch domain containing 2	CR618882|KLHDC2|23588|kelch domain containing 2	AF244137|KLHDC2|23588|kelch domain containing 2	BC002335|KLHDC2|23588|kelch domain containing 2	BC024192|KLHDC2|23588|kelch domain containing 2	CR592955|KLHDC2|23588|kelch domain containing 2	CR617895|KLHDC2|23588|kelch domain containing 2	AK001771|KLHDC2|23588|kelch domain containing 2	CR609630|KLHDC2|23588|kelch domain containing 2	CR594509|KLHDC2|23588|kelch domain containing 2	CR614613|KLHDC2|23588|kelch domain containing 2	CR591808|KLHDC2|23588|kelch domain containing 2	CR592763|KLHDC2|23588|kelch domain containing 2	CR625292|KLHDC2|23588|kelch domain containing 2	BX161429|KLHDC2|23588|kelch domain containing 2
hg18_v1_chr14_+_64041170_64041223	0.000297939	SOX2.p2	AB023214|ZBTB1|22890|zinc finger and BTB domain containing 1
hg18_v1_chr19_+_62483606_62483793	0.000289937	SOX2.p2	AK292144|ZNF460|10794|zinc finger protein 460	NM_006635|ZNF460|10794|zinc finger protein 460	AK074582|ZNF460|10794|zinc finger protein 460	AY329492|ZNF460|10794|zinc finger protein 460
hg18_v1_chr9_-_88064338_88064369	0.000273852	SOX2.p2	NM_001010907|C9orf153|389766|chromosome 9 open reading frame 153	BC108665|C9orf153|389766|chromosome 9 open reading frame 153
hg18_v1_chr6_-_42821761_42821788	0.000273373	SOX2.p2	CR602269|TBCC|6903|tubulin folding cofactor C	CR590261|TBCC|6903|tubulin folding cofactor C	CR590736|TBCC|6903|tubulin folding cofactor C	CR604530|TBCC|6903|tubulin folding cofactor C	CR623339|TBCC|6903|tubulin folding cofactor C	BT007002|TBCC|6903|tubulin folding cofactor C
hg18_v1_chr11_-_18769703_18769980	0.000266497	SOX2.p2	AK294374|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)	BC064807|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)	AK316270|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)	AK294673|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)	BC039897|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)	AK295604|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)	AK090923|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)	AL832541|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)	NM_001039970|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)	NM_006906|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)	NM_032781|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)
hg18_v1_chr11_-_71469082_71469247	0.000264971	SOX2.p2	BC004165|NUMA1|4926|nuclear mitotic apparatus protein 1	BC103765|NUMA1|4926|nuclear mitotic apparatus protein 1	AB210007|NUMA1|4926|nuclear mitotic apparatus protein 1	BC027493|NUMA1|4926|nuclear mitotic apparatus protein 1	BC043499|NUMA1|4926|nuclear mitotic apparatus protein 1	AK307577|NUMA1|4926|nuclear mitotic apparatus protein 1	Z11583|NUMA1|4926|nuclear mitotic apparatus protein 1	Z11584|NUMA1|4926|nuclear mitotic apparatus protein 1	NM_006185|NUMA1|4926|nuclear mitotic apparatus protein 1
hg18_v1_chr13_+_57103789_57103789	0.000257359	SOX2.p2	NM_001040429|PCDH17|27253|protocadherin 17
hg18_v1_chr12_-_54938385_54938447	0.000225317	SOX2.p2	NM_173595|ANKRD52|283373|ankyrin repeat domain 52	AB190990|ANKRD52|283373|ankyrin repeat domain 52	AK125379|ANKRD52|283373|ankyrin repeat domain 52
hg18_v1_chr17_-_71580178_71580182	0.000225304	SOX2.p2	AK126258|SRP68|6730|signal recognition particle 68kDa
hg18_v1_chr17_-_71580192_71580226	0.000204689	SOX2.p2	AK002002|SRP68|6730|signal recognition particle 68kDa	NM_014230|SRP68|6730|signal recognition particle 68kDa
hg18_v1_chr2_-_108517028_108517127	0.000194669	SOX2.p2	BC004487|FLJ38668|644903|hypothetical LOC644903	AK095987|FLJ38668|644903|hypothetical LOC644903
hg18_v1_chr6_+_26128656_26128696	0.000188617	SOX2.p2	BC066245|HIST1H3A|8350|histone cluster 1, H3a	BC066246|HIST1H3A|8350|histone cluster 1, H3a	BC066247|HIST1H3A|8350|histone cluster 1, H3a	BC067490|HIST1H3A|8350|histone cluster 1, H3a	BC067491|HIST1H3A|8350|histone cluster 1, H3a	BC069303|HIST1H3A|8350|histone cluster 1, H3a	CR541858|HIST1H3A|8350|histone cluster 1, H3a	NM_003529|HIST1H3A|8350|histone cluster 1, H3a
hg18_v1_chr17_-_71580117_71580170	0.000186948	SOX2.p2	AL512708|SRP68|6730|signal recognition particle 68kDa	AF195951|SRP68|6730|signal recognition particle 68kDa
hg18_v1_chr17_-_71580171_71580172	0.000168222	SOX2.p2	BC020238|SRP68|6730|signal recognition particle 68kDa	AK301100|SRP68|6730|signal recognition particle 68kDa
hg18_v1_chr20_-_61039710_61039750	0.000157587	SOX2.p2	NM_022105|DIDO1|11083|death inducer-obliterator 1	NM_033081|DIDO1|11083|death inducer-obliterator 1	NM_080797|DIDO1|11083|death inducer-obliterator 1
hg18_v1_chr20_+_57612996_57613103	0.000142397	SOX2.p2	BC108303|PHACTR3|116154|phosphatase and actin regulator 3	AJ311122|PHACTR3|116154|phosphatase and actin regulator 3	NM_080672|PHACTR3|116154|phosphatase and actin regulator 3	BC117362|PHACTR3|116154|phosphatase and actin regulator 3	BC117364|PHACTR3|116154|phosphatase and actin regulator 3
hg18_v1_chr17_-_71580177_71580177	0.000135947	SOX2.p2	AK074698|SRP68|6730|signal recognition particle 68kDa
hg18_v1_chr16_+_65195435_65195560	0.000129426	SOX2.p2	AK056324|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3
hg18_v1_chr11_-_60886038_60886415	0.000128376	SOX2.p2	BC014045|CYBASC3|220002|cytochrome b, ascorbate dependent 3	BC004391|CYBASC3|220002|cytochrome b, ascorbate dependent 3	AK056751|CYBASC3|220002|cytochrome b, ascorbate dependent 3	NM_001161454|CYBASC3|220002|cytochrome b, ascorbate dependent 3	NM_153611|CYBASC3|220002|cytochrome b, ascorbate dependent 3
hg18_v1_chrX_+_24621984_24621988	0.000126297	SOX2.p2	NM_016937|POLA1|5422|polymerase (DNA directed), alpha 1, catalytic subunit	X06745|POLA1|5422|polymerase (DNA directed), alpha 1, catalytic subunit
hg18_v1_chr9_+_132558972_132559004	0.000114598	SOX2.p2	AK001916|EXOSC2|23404|exosome component 2	AK296605|EXOSC2|23404|exosome component 2	NM_014285|EXOSC2|23404|exosome component 2	CR622078|EXOSC2|23404|exosome component 2	AK022460|EXOSC2|23404|exosome component 2	AK090512|EXOSC2|23404|exosome component 2	AK303163|EXOSC2|23404|exosome component 2	BC000747|EXOSC2|23404|exosome component 2	DQ892753|EXOSC2|23404|exosome component 2	EU176744|EXOSC2|23404|exosome component 2	CR590387|EXOSC2|23404|exosome component 2
hg18_v1_chr5_-_172976259_172976299	0.000112411	SOX2.p2	BC007436|BOD1|91272|biorientation of chromosomes in cell division 1	NM_001159651|BOD1|91272|biorientation of chromosomes in cell division 1	NM_138369|BOD1|91272|biorientation of chromosomes in cell division 1
hg18_v1_chr11_+_72697310_72697316	0.000106264	SOX2.p2	BC137228|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17	NM_014786|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17	AF378754|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17
hg18_v1_chr9_+_129870416_129870464	0.00010361	SOX2.p2	AJ619990|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25
hg18_v1_chr20_-_43732291_43732322	9.91285e-05	SOX2.p2	AY047609|WFDC11|259239|WAP four-disulfide core domain 11	NM_147197|WFDC11|259239|WAP four-disulfide core domain 11	BC062670|WFDC11|259239|WAP four-disulfide core domain 11
hg18_v1_chr12_-_16321885_16321885	9.86993e-05	SOX2.p2	NM_001170798|SLC15A5|729025|solute carrier family 15, member 5
hg18_v1_chr16_+_87164311_87164312	9.06432e-05	SOX2.p2	AK300254|ZC3H18|124245|zinc finger CCCH-type containing 18	AK302716|ZC3H18|124245|zinc finger CCCH-type containing 18
hg18_v1_chr13_+_33290205_33290250	9.01618e-05	SOX2.p2	NM_002915|RFC3|5983|replication factor C (activator 1) 3, 38kDa	NM_181558|RFC3|5983|replication factor C (activator 1) 3, 38kDa	CR598980|RFC3|5983|replication factor C (activator 1) 3, 38kDa
hg18_v1_chr12_-_55686466_55686571	7.69982e-05	SOX2.p2	BC140890|ZBTB39|9880|zinc finger and BTB domain containing 39	BC146867|ZBTB39|9880|zinc finger and BTB domain containing 39	AB002350|ZBTB39|9880|zinc finger and BTB domain containing 39	BC152461|ZBTB39|9880|zinc finger and BTB domain containing 39	AK292468|ZBTB39|9880|zinc finger and BTB domain containing 39	NM_014830|ZBTB39|9880|zinc finger and BTB domain containing 39
hg18_v1_chr16_+_68015990_68016044	7.23771e-05	SOX2.p2	AB009282|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)	CR610358|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)	NM_030579|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)	CR605284|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)	BX647922|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)	CR621814|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)	CR622662|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)	CR625442|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)	CR623816|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)	BC014431|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)
hg18_v1_chr12_+_22669275_22669345	5.87939e-05	SOX2.p2	AF207600|ETNK1|55500|ethanolamine kinase 1	BC066907|ETNK1|55500|ethanolamine kinase 1	NM_001039481|ETNK1|55500|ethanolamine kinase 1	NM_018638|ETNK1|55500|ethanolamine kinase 1
hg18_v1_chr12_+_132217285_132217286	4.51881e-05	SOX2.p2	AK314784|ZNF10|7556|zinc finger protein 10	BC024182|ZNF10|7556|zinc finger protein 10	NM_015394|ZNF10|7556|zinc finger protein 10
hg18_v1_chr14_+_49304657_49304685	3.42662e-05	SOX2.p2	AF113131|KLHDC2|23588|kelch domain containing 2
hg18_v1_chr12_+_54498129_54498146	2.6052e-05	SOX2.p2	AK223180|ORMDL2|29095|ORM1-like 2 (S. cerevisiae)
hg18_v1_chr17_+_72244224_72244529	2.0003e-05	SOX2.p2	AF015190|MFSD11|79157|major facilitator superfamily domain containing 11	AF015186|MFSD11|79157|major facilitator superfamily domain containing 11	AF015187|MFSD11|79157|major facilitator superfamily domain containing 11
hg18_v1_chr9_-_32542573_32542632	1.79093e-05	SOX2.p2	NM_001195622|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase	NM_005802|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase
hg18_v1_chr1_-_1157221_1157234	9.93513e-06	SOX2.p2	AK223079|SDF4|51150|stromal cell derived factor 4	AK222521|SDF4|51150|stromal cell derived factor 4	CR597574|SDF4|51150|stromal cell derived factor 4	AK315517|SDF4|51150|stromal cell derived factor 4	AF132749|SDF4|51150|stromal cell derived factor 4	CR616274|SDF4|51150|stromal cell derived factor 4	CR624179|SDF4|51150|stromal cell derived factor 4	CR626225|SDF4|51150|stromal cell derived factor 4	CR612176|SDF4|51150|stromal cell derived factor 4	CR626721|SDF4|51150|stromal cell derived factor 4
