ISMARA results for cerebellumRERUN
ISMARA - Integrated System for Motif Actitivity Response Analysis is a free online tool that recognizes most important transcription factors that are changing their activity in a set of samples.
All motifs sorted by activity significance
| Motif name | Z-value | Associated genes | Profile | Logo |
|---|---|---|---|---|
| NRF1.p2 | 4.952 |
Nrf1
(D6Ertd415e)
|
|
|
| E2F1..5.p2 | 4.553 |
E2f4
E2f5 (E2F-5) E2f2 E2f1 (E2F-1) E2f3 (E2F3b, E2f3a) |
|
|
| ELK1,4_GABP{A,B1}.p3 | 4.519 |
Gabpa
(GABPalpha)
Gabpb1 (NRF2B2, E4TF1-47, BABPB2, E4TF1, NRF2B1, E4Tf1B, GABPB1-1, GABPB1-2, E4TF1-53) Elk4 (Sap1) Elk1 (Elk-1) |
|
|
| REST.p3 | 4.504 |
Rest
(NRSF)
|
|
|
| RFX1..5_RFXANK_RFXAP.p2 | 4.419 |
Rfx1
Rfxap Rfx5 Rfxank (Tvl1) Rfx4 Rfx3 (MRFX3) Rfx2 |
|
|
| NFY{A,B,C}.p2 | 4.376 |
Nfyc
Nfyb (Cbf-A) Nfya (Sez10, Cbf-b) |
|
|
| ZNF143.p2 | 4.124 |
Zfp143
(KRAB14, Zfp80-rs1, Zfp79, Staf, D7Ertd805e, pHZ-1)
|
|
|
| YY1.p2 | 3.976 |
Yy1
(Yin Yang 1, delta transcription factor, UCRBP transcription factor, NF-E1)
|
|
|
| UGUGCUU | 3.382 | mmu-miR-218 |
|
|
| MYFfamily.p2 | 3.276 |
Myod1
(Myod-1, bHLHc1, MyoD, MYF3)
Myf6 (herculin, MRF4, bHLHc4) Myf5 (bHLHc2, Myf-5) Myog (bHLHc3, myo) |
|
|
| SOX17.p2 | 3.271 |
Sox17
|
|
|
| NR5A1,2.p2 | 3.134 |
Nr5a1
(Ad4BP, ELP, adrenal 4-binding protein, SF1, Ftz-F1, Ftzf1, SF-1, steroidogenic factor 1)
Nr5a2 (D1Ertd308e, Ftf, LRH-1) |
|
|
| SOX2.p2 | 3.098 |
Sox2
(ysb, Sox-2, lcc)
|
|
|
| GFI1.p2 | 2.985 |
Gfi1
(Pal-1, Gfi-1, Pal1)
|
|
|
| TFDP1.p2 | 2.945 |
Tfdp1
(Dp1, Drtf1)
|
|
|
| ZFP161.p2 | 2.927 |
Zfp161
(ZF5)
|
|
|
| ELF1,2,4.p2 | 2.876 |
Elf2
(NERF-2)
Elf1 (p70, Elf-1, mElf-1) Elf4 (myeloid elf-1 like factor, MEF) |
|
|
| MAFB.p2 | 2.855 |
Mafb
(Krml, Kreisler, Krml1)
|
|
|
| UAUUGCU | 2.839 | mmu-miR-137 |
|
|
| TEAD1.p2 | 2.838 |
Tead1
(Gtrgeo5, TEAD-1, TEF-1, mTEF-1, Tcf13)
Tead2 (Etdf, TEF-4, TEAD-2) Tead3 (TEAD-3, Tcf13r2, TEF-5, DTEF-1, ETFR-1) Tead4 (ETFR-2a, TEF-3, Tef3, TEAD-4, Etfr2, Tefr, Tcf13r1, Tefr1a) |
|
|
| ESRRA.p2 | 2.800 |
Esrra
(ERRalpha, Estrra, Err1, Nr3b1)
|
|
|
| HOX{A6,A7,B6,B7}.p2 | 2.761 |
Hoxb6
(Hox-2.2)
Hoxa7 (Hox-1.1) Hoxb7 (Hox-2.3) Hoxa6 (Hox-1.2) |
|
|
| AAGGCAC | 2.548 | mmu-miR-124 |
|
|
| EHF.p2 | 2.520 |
Ehf
|
|
|
| GAGGUAG | 2.456 | mmu-let-7a mmu-let-7b mmu-let-7c mmu-let-7d mmu-let-7e mmu-let-7f mmu-let-7g mmu-let-7i mmu-miR-98 mmu-miR-1961 |
|
|
| IRF1,2,7.p3 | 2.410 |
Irf1
(Irf-1)
Irf2 (Irf-2) Irf7 |
|
|
| TLX1..3_NFIC{dimer}.p2 | 2.383 |
Tlx1
(Hox-11, Hox11)
Tlx3 (Rnx, Tlx1l2, Hox11l2) |
|
|
| TBP.p2 | 2.383 |
Tbp
(Gtf2d)
|
|
|
| HNF1A.p2 | 2.351 |
Hnf1a
(hepatocyte nuclear factor 1, HNF1, Hnf-1, Hnf1alpha, HNF1-alpha, LFB1, Tcf1, HNF1[a])
|
|
|
| KLF12.p2 | 2.318 |
Klf12
(AP-2rep)
|
|
|
| HNF4A_NR2F1,2.p2 | 2.256 |
Nr2f1
(COUP-TF1, Tcfcoup1, Erbal3, COUP-TFI)
Nr2f2 (Tcfcoup2, COUP-TFII, ARP-1, EAR3, COUP-TF2, Aporp1) Hnf4a (Tcf4, Hnf4, Tcf14, Nuclear receptor 2A1, Nr2a1, HNF4 alpha, HNF-4, MODY1) |
|
|
| SOX{8,9,10}.p2 | 2.248 |
Sox9
Sox8 Sox10 (Sox21) |
|
|
| MTF1.p2 | 2.186 |
Mtf1
(MTF-1, metal response element-binding transcription factor 1, metalloregulatory transcription factor, Thyls)
|
|
|
| TFAP2{A,C}.p2 | 2.131 |
Tcfap2c
(AP2gamma, Ap-2.2, Stra2)
Tcfap2a (AP-2 alpha, AP2alpha, Ap2tf, Ap-2 (a), Ap2) |
|
|
| bHLH_family.p2 | 2.129 |
Arntl
(Bmal1, MOP3, bHLHe5, Arnt3)
Mitf (bHLHe32, wh, mi) Mxi1 (Mad2, bHLHc11) Tcfe3 (Tfe-3, bHLHe33, Tfe3) Clock (bHLHe8, KAT13D) Olig2 (Olg-2, Bhlhb1, bHLHe19, RK17) Mxd4 (Mad4, bHLHc12) Hey2 (Hrt2, bHLHb32, Hesr2, Herp1, CHF1) Hey1 (bHLHb31, Hesr1, hesr-1, Herp2, HRT1) Heyl (Hey3, Hrt3, bHLHb33, Hesr3) Mlxipl (bHLHd14, Wbscr14, ChREBP, WS-bHLH) Hes6 (bHLHb41) Mxd3 (bHLHc13, Mad3) Arntl2 (MOP9, bHLHe6, BMAL2) Id1 (Idb1, D2Wsu140e, bHLHb24) Mnt (Rox, bHLHd3) Olig1 (Olg-1, Bhlhb6, bHLHe21) Npas2 (bHLHe9, MOP4) |
|
|
| MYOD1.p2 | 2.111 |
Myod1
(Myod-1, bHLHc1, MyoD, MYF3)
|
|
|
| SNAI1..3.p2 | 2.099 |
Snai2
(Snail2, Slugh, Slug)
Snai1 (Sna, Snail1, Snail, Sna1) Snai3 (Smuc, Snail-related gene from muscle cells, Zfp293) |
|
|
| CCCUGAG | 2.083 | mmu-miR-125a-5p mmu-miR-125b-5p mmu-miR-351 |
|
|
| ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2 | 2.057 |
Arnt
(D3Ertd557e, bHLHe2, ESTM42, Hif1b)
Max (bHLHd7, bHLHd5, bHLHd8, bHLHd6, bHLHd4) Myc (Niard, Nird, bHLHe39, Myc2, c-myc) Usf1 (bHLHb11, upstream stimulatory factor) Bhlhe40 (eip1 (E47 interaction protein 1), Stra13, DEC1, Clast5, Bhlhb2, cytokine response gene 8, Stra14, CR8, Sharp2) Arnt2 (bHLHe1) |
|
|
| HBP1_HMGB_SSRP1_UBTF.p2 | 2.035 |
Hmgb2
(Hmg2, HMG-2)
Hmgb3 (Hmg2a, Hmg4) Ssrp1 (Hmg1-rs1, Hmgox, Hmgi-rs3, T160) Ubtf (UBF1, UBF, Tcfubf) Hbp1 (C86454) |
|
|
| ZNF148.p2 | 2.027 |
Zfp148
(beta enolase repressor factor 1, ZBP-89, BFCOL1, BERF-1)
|
|
|
| NHLH1,2.p2 | 1.954 |
Nhlh1
(bHLHa35, Hen1, Tal2, Nscl)
Nhlh2 (bHLHa34, NSCL2, Nscl-2, Hen2) |
|
|
| PITX1..3.p2 | 1.941 |
Pitx2
(solurshin, Munc30, Brx1, Brx1a, Pitx2a, Pitx2b, Brx1b, Pitx2c, Otlx2, Rieg, Ptx2)
Pitx3 (Ptx3) Pitx1 (P-OTX, Potx, Bft, Ptx1) |
|
|
| FOX{F1,F2,J1}.p2 | 1.938 |
Foxf2
(Fkh20, LUN, FREAC2)
Foxj1 (HFH-4, Hfh4, FKHL-13) Foxf1a (HFH-8, Hfh8, Freac-1, FREAC1, Foxf1) |
|
|
| BPTF.p2 | 1.935 |
Bptf
(Falz)
|
|
|
| AHR_ARNT_ARNT2.p2 | 1.920 |
Arnt
(D3Ertd557e, bHLHe2, ESTM42, Hif1b)
Ahr (Ahre, dioxin receptor, bHLHe76, Ahh, In, Ah) Arnt2 (bHLHe1) |
|
|
| SPZ1.p2 | 1.848 |
Spz1
|
|
|
| ZNF384.p2 | 1.832 |
Zfp384
(Nmp4, Ciz)
|
|
|
| FOXA2.p3 | 1.824 |
Foxa2
(Hnf3b, HNF3beta, HNF3-beta, Tcf3b, Hnf-3b, Tcf-3b)
|
|
|
| GTF2I.p2 | 1.771 |
Gtf2i
(TFII-I, BAP-135)
|
|
|
| NFE2L1.p2 | 1.769 |
Nfe2l1
(TCF-11, TCF11, NRF1, LCR-F1, Lcrf1)
|
|
|
| DBP.p2 | 1.764 |
Dbp
|
|
|
| ZEB1.p2 | 1.748 |
Zeb1
(Zfx1a, Zfhx1a, MEB1, AREB6, [delta]EF1, ZEB, Tcf8, Zfhep, Tcf18, Nil2)
|
|
|
| EWSR1-FLI1.p2 | 1.744 |
Fli1
(EWSR2, Sic1, SIC-1, Fli-1)
Ewsr1 (Ews) |
|
|
| CREB1.p2 | 1.739 |
Creb1
(Creb-1, Creb)
|
|
|
| TGIF1.p2 | 1.734 |
Tgif1
(Tgif)
|
|
|
| AGCAGCA | 1.723 | mmu-miR-15a mmu-miR-15b mmu-miR-16 mmu-miR-195 mmu-miR-322 mmu-miR-497 mmu-miR-1907 |
|
|
| GATA1..3.p2 | 1.702 |
Gata1
(Gata-1, Gf-1)
Gata2 (Gata-2) Gata3 (Gata-3) |
|
|
| ATF4.p2 | 1.699 |
Atf4
(CREB2, Atf-4, C/ATF, TAXREB67)
|
|
|
| LEF1_TCF7_TCF7L1,2.p2 | 1.687 |
Tcf7
(TCF-1, T-cell factor 1, Tcf1, T cell factor-1)
Tcf7l2 (mTcf-4E, Tcf4, mTcf-4B, TCF4E, Tcf-4, TCF4B) Lef1 (Lef-1, lymphoid enhancer factor 1) Tcf7l1 (Tcf3) |
|
|
| NFIL3.p2 | 1.682 |
Nfil3
(E4BP4)
|
|
|
| EVI1.p2 | 1.671 |
Mecom
(MDS1-EVI1, Prdm3, Jbo, Mds1, ZNFPR1B1, Evi-1, Evi1)
|
|
|
| TFAP2B.p2 | 1.649 |
Tcfap2b
(AP-2(beta))
|
|
|
| FOXQ1.p2 | 1.627 |
Foxq1
(Hfh1l, HFH-1, Hfh1, sa)
|
|
|
| CUUUGGU | 1.621 | mmu-miR-9 |
|
|
| STAT2,4,6.p2 | 1.608 |
Stat2
Stat4 Stat6 |
|
|
| POU2F1..3.p2 | 1.605 |
Pou2f2
(Otf-2, Oct2b, Oct2a, Oct-2, Otf2)
Pou2f1 (Oct-1C, Oct-1z, Oct1, Otf1, Oct-1A, Otf-1, oct-1, Oct-1B) Pou2f3 (Skin-1a, Skn-li, Skn-1a, Skin, Oct11, Otf11, Oct-11a, Otf-11, Epoc-1) |
|
|
| SMAD1..7,9.p2 | 1.582 |
Smad5
(MusMLP, Madh5, Smad 5)
Smad1 (Smad 1, Madh1, Madr1) Smad3 (Smad 3, Madh3) Smad4 (Smad 4, DPC4, Dpc4, Madh4, D18Wsu70e) Smad2 (Smad 2, Madh2, Madr2) Smad6 (Smad 6, Madh6) Smad7 (Madh7) Smad9 (SMAD8A, SMAD8B, Madh9, MADH6) |
|
|
| NR1H4.p2 | 1.568 |
Nr1h4
(RIP14, Rxrip14, HRR1, Fxr, FXR)
|
|
|
| GUAAACA | 1.563 | mmu-miR-30a mmu-miR-30b mmu-miR-30c mmu-miR-30d mmu-miR-30e mmu-miR-384-5p |
|
|
| ATF2.p2 | 1.560 |
Atf2
(Creb2, ATF-2, mXBP, CRE-BP)
|
|
|
| MZF1.p2 | 1.543 |
Mzf1
(Znf42, Mzf2, Zfp121, Zfp98)
|
|
|
| EGR1..3.p2 | 1.537 |
Egr3
(Pilot)
Egr1 (NGF1-A, NGFIA, Zenk, Egr-1, Krox-1, ETR103, TIS8, Krox-24, Zif268, Zfp-6, NGFI-A, Krox24) Egr2 (Egr-2, Krox-20, Zfp-25, NGF1-B, Krox20) |
|
|
| RXR{A,B,G}.p2 | 1.508 |
Rxra
(RXR alpha 1, RXRalpha1)
Rxrb (Nr2b2, H-2RIIBP, RCoR-1, Rub) Rxrg (Nr2b3) |
|
|
| GATA6.p2 | 1.485 |
Gata6
|
|
|
| HAND1,2.p2 | 1.484 |
Hand1
(Thing1, Hxt, eHAND, bHLHa27, Th1, Ehand1)
Hand2 (bHLHa26, Thing2, Hed, Ehand2, dHAND) |
|
|
| ZIC1..3.p2 | 1.477 |
Zic1
(odd-paired homolog)
Zic2 (odd-paired homolog, Ku, GENA 29) Zic3 |
|
|
| FOS_FOS{B,L1}_JUN{B,D}.p2 | 1.473 |
Fos
(cFos, c-fos, D12Rfj1)
Junb Fosl1 (fra-1, Fra1) Jund Fosb |
|
|
| NFKB1_REL_RELA.p2 | 1.469 |
Rela
(p65 NF kappaB, p65)
Rel (c-Rel) Nfkb1 (nuclear factor kappaB p50, NF-kappaB p50, p50, NF-kappaB, p50/p105, p50 subunit of NF kappaB, NF kappaB1) |
|
|
| HIF1A.p2 | 1.443 |
Hif1a
(MOP1, bHLHe78, HIF-1alpha, HIF1alpha)
|
|
|
| MYB.p2 | 1.442 |
Myb
(c-myb)
|
|
|
| FOXN1.p2 | 1.415 |
Foxn1
(Hfh11, D11Bhm185e, whn)
|
|
|
| SP1.p2 | 1.403 |
Sp1
(Sp1-1)
|
|
|
| HIC1.p2 | 1.402 |
Hic1
(HIC-1)
|
|
|
| GGCAGUG | 1.387 | mmu-miR-34a mmu-miR-34b-5p mmu-miR-34c mmu-miR-449a mmu-miR-449b mmu-miR-449c |
|
|
| NFIX.p2 | 1.376 |
Nfix
|
|
|
| CAGCAGG | 1.372 | mmu-miR-214 mmu-miR-761 |
|
|
| SRY.p2 | 1.372 |
Sry
(Tdf, Tdy)
|
|
|
| ZBTB6.p2 | 1.370 |
Zbtb6
(Zfp482)
|
|
|
| UGCAUAG | 1.367 | mmu-miR-153 |
|
|
| EN1,2.p2 | 1.357 |
En1
(engrailed-1, Mo-en.1, En-1)
En2 (En-2) |
|
|
| ESR1.p2 | 1.347 |
Esr1
(ER-alpha, ERalpha, ESR, ER[a], Nr3a1, ERa, Estra, Estr)
|
|
|
| PRRX1,2.p2 | 1.335 |
Prrx2
(S8, Prx2)
Prrx1 (Pmx1, Prx1, mHox, K-2) |
|
|
| HES1.p2 | 1.329 |
Hes1
(Hry, bHLHb39)
|
|
|
| TCF4_dimer.p2 | 1.307 |
Tcf4
(E2.2, bHLHb19, SEF-2, TFE, ME2, ITF-2b, ASP-I2, MITF-2A, SEF2-1, E2-2, ITF-2, MITF-2B)
|
|
|
| TFAP4.p2 | 1.287 |
Tcfap4
(bHLHc41, Tfap4, AP-4)
|
|
|
| PAX4.p2 | 1.286 |
Pax4
(Pax-4)
|
|
|
| LMO2.p2 | 1.275 |
Lmo2
(Rbtn-2, Rbtn2, Rhom-2)
|
|
|
| ATF5_CREB3.p2 | 1.271 |
Atf5
(Atf7, AFTA, Atfx, ODA-10)
Creb3 (LZIP-1, LZIP, Luman, LZIP-2) |
|
|
| NR6A1.p2 | 1.257 |
Nr6a1
(NCNF, Gcnf)
|
|
|
| UCAAGUA | 1.256 | mmu-miR-26a mmu-miR-26b |
|
|
| TLX2.p2 | 1.253 |
Tlx2
(Ncx1, Enx, Hox11L.1, Tlx1l1, NCX, Hox11l1)
|
|
|
| GLI1..3.p2 | 1.241 |
Gli1
(Zfp-5, Zfp5)
Gli2 Gli3 (Bph, brachyphalangy) |
|
|
| RBPJ.p2 | 1.219 |
Rbpj
(RBPjk, RBP-J kappa, Rbpsuh, Igkjrb, CBF1, Igkrsbp)
|
|
|
| SRF.p3 | 1.213 |
Srf
|
|
|
| AIRE.p2 | 1.209 |
Aire
|
|
|
| TFEB.p2 | 1.205 |
Tcfeb
(bHLHe35, TFEB)
|
|
|
| HMGA1,2.p2 | 1.201 |
Hmga1
(Hmga1b, Hmgi, HMGI(Y), Hmga1a, HMG-I(Y), HMGY, Hmgiy)
Hmga2 (HMGI-C, Hmgic) |
|
|
| FOXL1.p2 | 1.200 |
Foxl1
(fkh6, Fkh6, FREAC7, fkh-6)
|
|
|
| SPI1.p2 | 1.191 |
Sfpi1
(Sfpi-1, PU.1, Spi-1, Tcfpu1, Dis-1, Tfpu.1)
|
|
|
| NKX3-1.p2 | 1.189 |
Nkx3-1
(Nkx-3.1, bagpipe, NKX3.1, NKX3A, Bax)
|
|
|
| ETS1,2.p2 | 1.184 |
Ets2
(Ets-2)
Ets1 (Tpl1, p51Ets-1, p42Ets-1, Ets-1) |
|
|
| TBX4,5.p2 | 1.180 |
Tbx5
Tbx4 |
|
|
| IKZF1.p2 | 1.178 |
Ikzf1
(Ikaros, Zfpn1a1, LyF-1)
|
|
|
| GAUUGUC | 1.172 | mmu-miR-219-5p |
|
|
| STAT5{A,B}.p2 | 1.169 |
Stat5b
Stat5a (STAT5) |
|
|
| ZNF423.p2 | 1.165 |
Zfp423
(ataxia1, Ebfaz, Zfp104, Roaz)
|
|
|
| PAX5.p2 | 1.164 |
Pax5
(Pax-5, EBB-1)
|
|
|
| JUN.p2 | 1.148 |
Jun
(c-jun, Junc)
Jund Junb |
|
|
| ZNF238.p2 | 1.146 |
Zfp238
(RP58)
|
|
|
| UUGGCAC | 1.125 | mmu-miR-96 |
|
|
| CCAGUGU | 1.120 | mmu-miR-199a-5p |
|
|
| FOX{D1,D2}.p2 | 1.117 |
Foxd2
(Mf2)
Foxd1 (FREAC4, BF-2, Hfh10, Hfhbf2) |
|
|
| AACACUG | 1.107 | mmu-miR-141 mmu-miR-200a |
|
|
| ADNP_IRX_SIX_ZHX.p2 | 1.107 |
Six5
(MDMAHP, TrexBF, Dmahp)
Zhx1 Irx4 Adnp Zhx3 (Tix1) Zhx2 (Raf, Afr-1, Afr1) Irx5 Six2 |
|
|
| NKX6-1,2.p2 | 1.105 |
Nkx6-1
(NKX6A, Nkx6.1)
Nkx6-2 (Nkx6.2, Gtx) |
|
|
| ACAUUCA | 1.098 | mmu-miR-181a mmu-miR-181b mmu-miR-181c mmu-miR-181d |
|
|
| HOX{A4,D4}.p2 | 1.095 |
Hoxa4
(Hox-1.4)
Hoxd4 (Hox-4.2, Hox-5.1) |
|
|
| NFATC1..3.p2 | 1.090 |
Nfatc3
(D8Ertd281e, NFATx, NFAT4)
Nfatc2 (NFAT1-D, NFAT1, NFATp) Nfatc1 (NFATc, NFAT2, NF-ATc) |
|
|
| HSF1,2.p2 | 1.087 |
Hsf1
(heat shock transcription factor 1)
Hsf2 |
|
|
| RORA.p2 | 1.074 |
Rora
(Nr1f1, tmgc26)
|
|
|
| NFE2L2.p2 | 1.069 |
Nfe2l2
(Nrf2)
|
|
|
| GCUGGUG | 1.054 | mmu-miR-138 |
|
|
| ONECUT1,2.p2 | 1.041 |
Onecut2
(OC-2, Oc2)
Onecut1 (OC-1, HNF6, Hfh12, Hnf6, Oc1, D9Ertd423e) |
|
|
| TFCP2.p2 | 1.022 |
Tcfcp2
(UBP-1, CP-2, CP2, LBP-1d, LBP1, LBP-1c, LSF)
|
|
|
| RUNX1..3.p2 | 1.020 |
Runx1
(AML1, runt domain, alpha subunit 2, Pebp2a2, Cbfa2)
Runx3 (Cbfa3, AML2) Runx2 (SL3-3 enhancer factor 1, AML3, polyomavirus enhancer binding factor 2 (PEBP2), PEBP2 alpha A, PEBP2aA, Cbfa1, Pebpa2a, Osf2) |
|
|
| KLF4.p3 | 1.008 |
Klf4
(EZF, Zie, Gklf)
|
|
|
| MAZ.p2 | 1.007 |
Maz
(Pur-1, SAF-1, PUR1, SAF-2)
|
|
|
| GGAAGAC | 1.004 | mmu-miR-7a mmu-miR-7b |
|
|
| XBP1.p3 | 1.003 |
Xbp1
(D11Ertd39e, TREB5, TREB-5, XBP-1)
|
|
|
| RREB1.p2 | 0.998 |
Rreb1
|
|
|
| GUGCAAA | 0.994 | mmu-miR-19a mmu-miR-19b |
|
|
| CTCF.p2 | 0.987 |
Ctcf
|
|
|
| AGCAGCG | 0.980 | mmu-miR-503 |
|
|
| POU5F1_SOX2{dimer}.p2 | 0.978 |
Pou5f1
(Otf3-rs7, Oct3/4, Otf-4, Oct-3, Oct4, Otf3, Oct-3/4, Otf3g, Otf-3, Otf4, Oct-4)
Sox2 (ysb, Sox-2, lcc) |
|
|
| MEF2{A,B,C,D}.p2 | 0.975 |
Mef2a
Mef2c Mef2d Mef2b |
|
|
| UGAAAUG | 0.968 | mmu-miR-203 |
|
|
| SOX5.p2 | 0.960 |
Sox5
|
|
|
| ZBTB16.p2 | 0.959 |
Zbtb16
(Zfp145, PLZF, Green's luxoid)
|
|
|
| ARID5B.p2 | 0.959 |
Arid5b
(Mrf2, Mrf2alpha, Desrt, Mrf2beta)
|
|
|
| GTF2A1,2.p2 | 0.957 |
Gtf2a1
(37kDa, 19kDa, TfIIAa/b)
Gtf2a2 (TfIIg, 12kDa) |
|
|
| GFI1B.p2 | 0.956 |
Gfi1b
(Gfi-1B)
|
|
|
| PAX2.p2 | 0.955 |
Pax2
(Pax-2, Opdc)
|
|
|
| GGCUCAG | 0.954 | mmu-miR-24 |
|
|
| POU5F1.p2 | 0.953 |
Pou5f1
(Otf3-rs7, Oct3/4, Otf-4, Oct-3, Oct4, Otf3, Oct-3/4, Otf3g, Otf-3, Otf4, Oct-4)
|
|
|
| EP300.p2 | 0.944 |
Ep300
(KAT3B, p300)
|
|
|
| SPIB.p2 | 0.941 |
Spib
(Spi-B)
|
|
|
| CDX1,2,4.p2 | 0.940 |
Cdx1
(Cdx, Cdx-1)
Cdx2 (Cdx-2) Cdx4 (Cdx-3, Cdx-4, Cdx3) |
|
|
| AAUACUG | 0.939 | mmu-miR-200b mmu-miR-200c mmu-miR-429 |
|
|
| NKX2-3_NKX2-5.p2 | 0.930 |
Nkx2-5
(Nkx-2.5, Nkx2.5, Csx, tinman)
Nkx2-3 (Nkx-2.3, tinman, Nkx2.3) |
|
|
| PATZ1.p2 | 0.921 |
Patz1
(Zfp278, MAZR, POZ-AT hook-zinc finger protein)
|
|
|
| GCAGCAU | 0.908 | mmu-miR-103 mmu-miR-107 |
|
|
| NKX3-2.p2 | 0.904 |
Nkx3-2
(Nkx-3.2, Bapx1)
|
|
|
| EBF1.p2 | 0.892 |
Ebf1
(Olf-1, Olf1, O/E-1)
|
|
|
| ACAGUAU | 0.883 | mmu-miR-144 |
|
|
| ATF6.p2 | 0.882 |
Atf6
(ESTM49, Atf6alpha)
|
|
|
| CUX2.p2 | 0.878 |
Cux2
(ENSMUSG00000072641, Cux-2, Cutl2, Cux2)
|
|
|
| FOX{I1,J2}.p2 | 0.871 |
Foxi1
(HFH-3, Fkh10, Hfh3)
Foxj2 (Fhx) |
|
|
| PBX1.p2 | 0.862 |
Pbx1
(Pbx-1)
|
|
|
| NKX2-2,8.p2 | 0.861 |
Nkx2-2
(Nkx2.2, tinman, Nkx-2.2)
Nkx2-9 (tinman, Nkx-2.9, Nkx2.9) |
|
|
| AUUGCAC | 0.846 | mmu-miR-25 mmu-miR-32 mmu-miR-92a mmu-miR-92b mmu-miR-363-3p mmu-miR-367 |
|
|
| AAAGUGC | 0.842 | mmu-miR-17 mmu-miR-20a mmu-miR-20b mmu-miR-93 mmu-miR-106a mmu-miR-106b |
|
|
| CRX.p2 | 0.841 |
Crx
(Crx1)
|
|
|
| T.p2 | 0.837 |
T
(T1, Bra)
|
|
|
| HOX{A5,B5}.p2 | 0.837 |
Hoxb5
(Hox-2.1)
Hoxa5 (Hox-1.3) |
|
|
| GUAGUGU | 0.831 | mmu-miR-142-3p |
|
|
| FEV.p2 | 0.828 |
Fev
(Pet1, mPet-1)
|
|
|
| SREBF1,2.p2 | 0.825 |
Srebf1
(SREBP-1a, SREBP1, SREBP-1c, SREBP-1, bHLHd1, ADD-1, SREBP1c)
Srebf2 (bHLHd2, SREBP-2, SREBP2gc, SREBP2) |
|
|
| AUGGCAC | 0.822 | mmu-miR-183 |
|
|
| AGUGCAA | 0.815 | mmu-miR-130a mmu-miR-130b mmu-miR-301a mmu-miR-301b mmu-miR-721 |
|
|
| UCCAGUU | 0.795 | mmu-miR-145 |
|
|
| RXRA_VDR{dimer}.p2 | 0.794 |
Vdr
(Nr1i1)
|
|
|
| HMX1.p2 | 0.788 |
Hmx1
(Nkx5-3)
|
|
|
| UUGGUCC | 0.773 | mmu-miR-133a mmu-miR-133b |
|
|
| GGAAUGU | 0.772 | mmu-miR-1a mmu-miR-206 |
|
|
| ACCCUGU | 0.769 | mmu-miR-10a mmu-miR-10b |
|
|
| NANOG.p2 | 0.767 |
Nanog
(ecat4, ENK)
|
|
|
| PRDM1.p3 | 0.764 |
Prdm1
(PRDI-BF1, Blimp-1, Blimp1)
|
|
|
| DMAP1_NCOR{1,2}_SMARC.p2 | 0.757 |
Smarca1
(Snf2l)
Smarcc2 Smarca5 (Snf2h, MommeD4) Ncor1 (N-CoR, Rxrip13) Ncor2 (SMRTe, SMRT) Dmap1 |
|
|
| ALX1.p2 | 0.757 |
Alx1
(Cart1)
|
|
|
| IKZF2.p2 | 0.754 |
Ikzf2
(Zfpn1a2, Helios)
|
|
|
| UGCAUUG | 0.741 | mmu-miR-33 |
|
|
| TP53.p2 | 0.738 |
Trp53
(p44, p53)
|
|
|
| AGCUGCC | 0.726 | mmu-miR-22 |
|
|
| UUUUUGC | 0.725 | mmu-miR-129-5p |
|
|
| FOXD3.p2 | 0.717 |
Foxd3
(Hfh2, Genesis, CWH3)
|
|
|
| ACAGUAC | 0.717 | mmu-miR-101a mmu-miR-101b |
|
|
| AGCACCA | 0.716 | mmu-miR-29a mmu-miR-29b mmu-miR-29c |
|
|
| MYBL2.p2 | 0.707 |
Mybl2
(Bmyb, B-Myb)
|
|
|
| UAAGACG | 0.705 | mmu-miR-208a-3p mmu-miR-208b |
|
|
| UUGUUCG | 0.704 | mmu-miR-375 |
|
|
| GUAACAG | 0.694 | mmu-miR-194 |
|
|
| AUGGCUU | 0.694 | mmu-miR-135a mmu-miR-135b |
|
|
| UUGGCAA | 0.693 | mmu-miR-182 |
|
|
| CDC5L.p2 | 0.686 |
Cdc5l
(PCDC5RP)
|
|
|
| EOMES.p2 | 0.676 |
Eomes
(Tbr2)
|
|
|
| CACAGUG | 0.670 | mmu-miR-128 |
|
|
| BACH2.p2 | 0.669 |
Bach2
|
|
|
| CCAGCAU | 0.669 | mmu-miR-338-3p |
|
|
| NFE2.p2 | 0.669 |
Nfe2
(p45nf-e2, p45NFE2, p45, NF-E2)
|
|
|
| AACAGUC | 0.667 | mmu-miR-132 mmu-miR-212-3p |
|
|
| UAAGACU | 0.641 | mmu-miR-499 |
|
|
| AGCUUAU | 0.637 | mmu-miR-21 mmu-miR-590-5p |
|
|
| NKX2-1,4.p2 | 0.625 |
Nkx2-1
(T/EBP, thyroid transcription factor-1, Titf1, thyroid-specific enhancer-binding protein, tinman, Ttf-1)
Nkx2-4 (Nkx-2.4, tinman) |
|
|
| NR3C1.p2 | 0.625 |
Nr3c1
(glucocorticoid receptor, GR, Grl1, Grl-1)
|
|
|
| POU6F1.p2 | 0.613 |
Pou6f1
(Emb, cns-1)
|
|
|
| HLF.p2 | 0.604 |
Hlf
|
|
|
| UCACAGU | 0.604 | mmu-miR-27a mmu-miR-27b |
|
|
| GUCAGUU | 0.595 | mmu-miR-223 |
|
|
| FOSL2.p2 | 0.592 |
Fosl2
(Fra-2)
|
|
|
| UCCCUUU | 0.587 | mmu-miR-204 mmu-miR-211 |
|
|
| NANOG{mouse}.p2 | 0.586 |
Nanog
(ecat4, ENK)
|
|
|
| GAGAACU | 0.583 | mmu-miR-146a mmu-miR-146b |
|
|
| CEBPA,B_DDIT3.p2 | 0.582 |
Ddit3
(CHOP-10, C/EBP homoologous protein 10, chop, gadd153, CHOP10)
Cebpa (C/ebpalpha, Cebp, C/EBP alpha) Cebpb (CRP2, C/EBPbeta, Nfil6, LAP, C/EBP BETA, LIP, NF-M, IL-6DBP, NF-IL6) |
|
|
| AAGUGCU | 0.576 | mmu-miR-291a-3p mmu-miR-294 mmu-miR-295 mmu-miR-302a mmu-miR-302b mmu-miR-302d |
|
|
| UCACAUU | 0.574 | mmu-miR-23a mmu-miR-23b |
|
|
| LHX3,4.p2 | 0.545 |
Lhx3
(P-LIM, mLim-3, Lim3)
Lhx4 (Gsh4, Gsh-4) |
|
|
| UAAUGCU | 0.533 | mmu-miR-155 |
|
|
| CCUUCAU | 0.510 | mmu-miR-205 |
|
|
| POU3F1..4.p2 | 0.482 |
Pou3f1
(Tst-1, Test1, Scip, Oct6, Oct-6, Tst1, Otf6)
Pou3f3 (Brn1, Brn-1, Otf8) Pou3f2 (Otf7, Brn2, Brn-2) Pou3f4 (BRN-4, Otf9, Brn4) |
|
|
| AGUGGUU | 0.476 | mmu-miR-140 mmu-miR-876-3p |
|
|
| GAGAUGA | 0.472 | mmu-miR-143 |
|
|
| TAL1_TCF{3,4,12}.p2 | 0.472 |
Tcf3
(ALF2, E12, bHLHb21, Tcfe2a, A1, E47, Pan1, E2A, Pan2)
Tcf4 (E2.2, bHLHb19, SEF-2, TFE, ME2, ITF-2b, ASP-I2, MITF-2A, SEF2-1, E2-2, ITF-2, MITF-2B) Tal1 (bHLHa17, Scl, SCL/tal-1) Tcf12 (HTF4, bHLHb20, HEB, HTF-4, REB, ALF1, HEBAlt, ME1) |
|
|
| AGGUAGU | 0.469 | mmu-miR-196a mmu-miR-196b |
|
|
| POU1F1.p2 | 0.464 |
Pou1f1
(Pit1-rs1, Hmp1, GHF-1, Pit1, Pit-1)
|
|
|
| FOX{C1,C2}.p2 | 0.461 |
Foxc1
(Mf1, frkhda, fkh-1, Mf4, FREAC3, fkh1, Fkh1)
Foxc2 (Hfhbf3, Fkh14, MFH-1, Mfh1) |
|
|
| CAGUGCA | 0.458 | mmu-miR-148a mmu-miR-148b mmu-miR-152 |
|
|
| CUCCCAA | 0.457 | mmu-miR-150 mmu-miR-5127 |
|
|
| RXRG_dimer.p3 | 0.429 |
Nr1h2
(LXRbeta, RIP15, Unr2, LXRB)
Rxra (RXR alpha 1, RXRalpha1) Pparg (Ppar-gamma2, PPAR-gamma, PPARgamma, PPARgamma2, Nr1c3) Ppara (PPAR-alpha, PPARalpha, Nr1c1, Ppar) Rxrb (Nr2b2, H-2RIIBP, RCoR-1, Rub) Rxrg (Nr2b3) |
|
|
| STAT1,3.p3 | 0.428 |
Stat1
Stat3 (Aprf) |
|
|
| GCUACAU | 0.423 | mmu-miR-221 mmu-miR-222 mmu-miR-1928 |
|
|
| VSX1,2.p2 | 0.406 |
Vsx2
(Hox10, Chx10, Hox-10)
Vsx1 (CHX10-like) |
|
|
| FOXO1,3,4.p2 | 0.397 |
Foxo1
(FKHR, Foxo1a, Fkhr1, Afxh)
Foxo4 (Mllt7, Foxo4, afx, Afxh) Foxo3 (FKHRL1, Foxo3a, Fkhr2) |
|
|
| AUGACAC | 0.356 | mmu-miR-425 mmu-miR-489 |
|
|
| PPARG.p2 | 0.346 |
Pparg
(Ppar-gamma2, PPAR-gamma, PPARgamma, PPARgamma2, Nr1c3)
|
|
|
| GZF1.p2 | 0.340 |
Gzf1
(Zfp336)
|
|
|
| FOXP3.p2 | 0.339 |
Foxp3
(scurfin, JM2)
|
|
|
| GGCAAGA | 0.316 | mmu-miR-31 |
|
|
| GAUCAGA | 0.311 | mmu-miR-383 |
|
|
| CUACAGU | 0.308 | mmu-miR-139-5p |
|
|
| AAUGCCC | 0.296 | mmu-miR-365 |
|
|
| HOXA9_MEIS1.p2 | 0.290 |
Meis1
Hoxa9 (Hox-1.7, D6a9) |
|
|
| ACUGGCC | 0.287 | mmu-miR-193 mmu-miR-193b |
|
|
| AAGGUGC | 0.271 | mmu-miR-18a mmu-miR-18b |
|
|
| AACGGAA | 0.249 | mmu-miR-191 |
|
|
| CGUGUCU | 0.247 | mmu-miR-187 |
|
|
| MSX1,2.p2 | 0.246 |
Msx1
(msh, Hox7.1, Hox7, muscle-segment homeobox, Hox-7)
Msx2 (Hox-8, Hox8, Hox8.1) |
|
|
| UGUGCGU | 0.234 | mmu-miR-210 |
|
|
| PDX1.p2 | 0.225 |
Pdx1
(Ipf1, IPF-1, pdx-1, STF-1, Mody4, IDX-1)
|
|
|
| PAX6.p2 | 0.222 |
Pax6
(Pax-6, Dickie's small eye, AEY11, Dey, Gsfaey11)
|
|
|
| AR.p2 | 0.220 |
Ar
|
|
|
| GGAGUGU | 0.218 | mmu-miR-122 |
|
|
| AACCUGG | 0.211 | mmu-miR-490-3p |
|
|
| GAUAUGU | 0.185 | mmu-miR-190 mmu-miR-190b |
|
|
| GGACGGA | 0.175 | mmu-miR-184 |
|
|
| ACUGCAU | 0.172 | mmu-miR-217 |
|
|
| AAUCUCA | 0.166 | mmu-miR-216a |
|
|
| AAUCUCU | 0.144 | mmu-miR-216b |
|
|
| UGACCUA | 0.144 | mmu-miR-192 mmu-miR-215 |
|
|
| CGUACCG | 0.132 | mmu-miR-126-3p |
|
|
| PAX3,7.p2 | 0.069 |
Pax7
(Pax-7)
Pax3 (Pax-3) |
|
|
| AACCGUU | 0.055 | mmu-miR-451 |
|
|
| PAX8.p2 | 0.045 |
Pax8
(Pax-8)
|
|
|
| ACCCGUA | 0.014 | mmu-miR-99a mmu-miR-99b mmu-miR-100 |
|
|
All samples sorted alphabetically
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