avrg: A549 cells infected with IAV Analysis Results (GEO series: GSE147507)
ISMARA - Integrated System for Motif Actitivity Response Analysis is a free online tool that recognizes most important transcription factors that are changing their activity in a set of samples.
Sample | Condition |
---|---|
3-9-mock1-13_S20 | mock_A549 |
3-9-mock2-14_S1 | mock_A549 |
3-9-wt1-15_S2 | IAV_infected_A549 |
3-9-wt2-16_S16 | IAV_infected_A549 |
Motif name | Z-value | Associated genes | Profile | Logo |
---|---|---|---|---|
PATZ1_KLF4 | 3.82 |
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MYB | 3.78 |
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HIC2 | 3.52 |
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CTCF_CTCFL | 3.49 |
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ZNF711_TFAP2A_TFAP2D | 3.38 |
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IKZF1 | 3.33 |
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FOXM1_TBL1XR1 | 3.18 |
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E2F3 | 3.08 |
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NR3C1 | 3.02 |
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SIN3A_CHD1 | 3.02 |
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In order to use ARMADA for infering putative regulatory networks from timecourse data, please set for every sample a timepoint, gap from previous timepoint and replicate. If you have only one replicate per sample you can leave replicate field unset.