Motif ID: Pax1_Pax9

Z-value: 0.456

Transcription factors associated with Pax1_Pax9:

Gene SymbolEntrez IDGene Name
Pax1 ENSMUSG00000037034.9 Pax1
Pax9 ENSMUSG00000001497.12 Pax9



Activity profile for motif Pax1_Pax9.

activity profile for motif Pax1_Pax9


Sorted Z-values histogram for motif Pax1_Pax9

Sorted Z-values for motif Pax1_Pax9



Network of associatons between targets according to the STRING database.



First level regulatory network of Pax1_Pax9

PNG image of the network

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Top targets:


Promoter Score Refseq Gene Symbol Gene Name
chr2_-_36105271 6.434 ENSMUST00000112960.1
ENSMUST00000112967.5
ENSMUST00000112963.1
 Lhx6


LIM homeobox protein 6


chr4_-_143299498 3.418 ENSMUST00000030317.7
 Pdpn
podoplanin
chr4_-_143299463 3.281 ENSMUST00000119654.1
 Pdpn
podoplanin
chr9_-_22389113 3.066 ENSMUST00000040912.7
 Anln
anillin, actin binding protein
chr12_-_90969768 2.112 ENSMUST00000181184.1
 4930544I03Rik
RIKEN cDNA 4930544I03 gene
chr4_+_115000156 1.732 ENSMUST00000030490.6
 Stil
Scl/Tal1 interrupting locus
chr4_+_11558914 1.534 ENSMUST00000178703.1
ENSMUST00000095145.5
ENSMUST00000108306.2
ENSMUST00000070755.6
 Rad54b



RAD54 homolog B (S. cerevisiae)



chr4_+_115000174 1.481 ENSMUST00000129957.1
 Stil
Scl/Tal1 interrupting locus
chr5_-_129787175 1.424 ENSMUST00000031399.6
 Psph
phosphoserine phosphatase
chr4_-_110286581 0.985 ENSMUST00000138972.1
 Elavl4
ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
chr19_-_29047847 0.832 ENSMUST00000025696.4
 Ak3
adenylate kinase 3
chr13_-_62607499 0.832 ENSMUST00000091563.4
 6720489N17Rik
RIKEN cDNA 6720489N17 gene
chr13_-_62520451 0.505 ENSMUST00000082203.6
ENSMUST00000101547.4
 Zfp934

zinc finger protein 934

chr17_-_27909206 0.487 ENSMUST00000114848.1
 Taf11
TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor
chr8_+_94838321 0.444 ENSMUST00000034234.8
ENSMUST00000159871.1
 Coq9

coenzyme Q9 homolog (yeast)

chr9_+_96196246 0.442 ENSMUST00000165120.2
ENSMUST00000034982.9
 Tfdp2

transcription factor Dp 2

chr17_+_27909337 0.422 ENSMUST00000114842.1
ENSMUST00000025058.7
ENSMUST00000088027.5
 Anks1


ankyrin repeat and SAM domain containing 1


chrX_+_74313014 0.417 ENSMUST00000114160.1
 Fam50a
family with sequence similarity 50, member A
chr18_-_10706688 0.391 ENSMUST00000002549.7
ENSMUST00000117726.1
ENSMUST00000117828.1
 Abhd3


abhydrolase domain containing 3


chr2_+_84734050 0.353 ENSMUST00000090729.2
 Ypel4
yippee-like 4 (Drosophila)
chr5_-_31291026 0.325 ENSMUST00000041565.7
 Ift172
intraflagellar transport 172
chr9_-_121839460 0.301 ENSMUST00000135986.2
 Ccdc13
coiled-coil domain containing 13
chr12_+_33957645 0.292 ENSMUST00000049089.5
 Twist1
twist basic helix-loop-helix transcription factor 1
chr13_-_62777089 0.282 ENSMUST00000167516.2
 Gm5141
predicted gene 5141
chr8_-_94838255 0.169 ENSMUST00000161762.1
ENSMUST00000162538.1
 Ciapin1

cytokine induced apoptosis inhibitor 1

chr18_+_69344503 0.119 ENSMUST00000114985.3
 Tcf4
transcription factor 4
chr9_+_21337828 0.091 ENSMUST00000034697.7
 Slc44a2
solute carrier family 44, member 2
chr10_+_77978524 0.074 ENSMUST00000105397.3
ENSMUST00000105398.1
 1810043G02Rik

RIKEN cDNA 1810043G02 gene

chr7_-_24299310 0.059 ENSMUST00000145131.1
 Zfp61
zinc finger protein 61
chr5_+_112255813 0.034 ENSMUST00000031286.6
ENSMUST00000131673.1
ENSMUST00000112375.1
 Crybb1


crystallin, beta B1



Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Log-likelihood per target  Total log-likelihood Term Description
1.1 6.4 GO:1904936 cerebral cortex GABAergic interneuron migration(GO:0021853) interneuron migration(GO:1904936)
0.7 6.7 GO:0010572 positive regulation of platelet activation(GO:0010572)
0.4 3.2 GO:0033504 floor plate development(GO:0033504)
0.3 1.4 GO:0006564 L-serine biosynthetic process(GO:0006564)
0.1 0.8 GO:0006172 ADP biosynthetic process(GO:0006172)
0.1 0.4 GO:1901187 regulation of ephrin receptor signaling pathway(GO:1901187)
0.1 0.3 GO:0033128 negative regulation of histone phosphorylation(GO:0033128)
0.1 1.5 GO:0008340 determination of adult lifespan(GO:0008340)
0.1 3.1 GO:0000281 mitotic cytokinesis(GO:0000281)
0.0 0.5 GO:0043923 positive regulation by host of viral transcription(GO:0043923)
0.0 0.4 GO:0006120 mitochondrial electron transport, NADH to ubiquinone(GO:0006120)
0.0 0.3 GO:0070986 left/right axis specification(GO:0070986)
0.0 0.1 GO:0042118 endothelial cell activation(GO:0042118)
0.0 1.0 GO:0043488 regulation of mRNA stability(GO:0043488)
0.0 0.4 GO:0046470 phosphatidylcholine metabolic process(GO:0046470)

Gene overrepresentation in cellular_component category:

Log-likelihood per target  Total log-likelihood Term Description
0.6 3.1 GO:0005826 actomyosin contractile ring(GO:0005826)
0.1 6.7 GO:0030175 filopodium(GO:0030175)
0.1 0.7 GO:0042788 polysomal ribosome(GO:0042788)
0.0 3.2 GO:0005814 centriole(GO:0005814)
0.0 0.5 GO:0005669 transcription factor TFIID complex(GO:0005669)
0.0 0.3 GO:0097225 sperm midpiece(GO:0097225)
0.0 0.3 GO:0034451 centriolar satellite(GO:0034451)
0.0 0.8 GO:0005758 mitochondrial intermembrane space(GO:0005758)

Gene overrepresentation in molecular_function category:

Log-likelihood per target  Total log-likelihood Term Description
0.6 6.7 GO:0008517 folic acid transporter activity(GO:0008517) water channel activity(GO:0015250)
0.5 1.4 GO:0004647 phosphoserine phosphatase activity(GO:0004647)
0.3 0.8 GO:0046899 nucleoside triphosphate adenylate kinase activity(GO:0046899)
0.2 1.5 GO:0015616 DNA translocase activity(GO:0015616)
0.1 0.4 GO:0052740 phosphatidylserine 1-acylhydrolase activity(GO:0052739) 1-acyl-2-lysophosphatidylserine acylhydrolase activity(GO:0052740)
0.0 0.5 GO:0042809 vitamin D receptor binding(GO:0042809)
0.0 0.1 GO:0001011 transcription factor activity, sequence-specific DNA binding, RNA polymerase recruiting(GO:0001011) transcription factor activity, TFIIB-class binding(GO:0001087)
0.0 1.0 GO:0017091 AU-rich element binding(GO:0017091)