Motif ID: Sox13

Z-value: 0.329


Transcription factors associated with Sox13:

Gene SymbolEntrez IDGene Name
Sox13 ENSMUSG00000070643.5 Sox13

Activity-expression correlation:

Gene SymbolPromoterPearson corr. coef.P-valuePlot
Sox13mm10_v2_chr1_-_133424377_1334244040.381.1e-03Click!


Activity profile for motif Sox13.

activity profile for motif Sox13


Sorted Z-values histogram for motif Sox13

Sorted Z-values for motif Sox13



Network of associatons between targets according to the STRING database.



First level regulatory network of Sox13

PNG image of the network

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Top targets:


Showing 1 to 20 of 31 entries
PromoterScoreRefseqGene SymbolGene Name
chr8_-_84773381 2.770 ENSMUST00000109764.1
 Nfix
nuclear factor I/X
chr3_+_34649987 2.454 ENSMUST00000099151.2
 Sox2
SRY-box containing gene 2
chr2_+_25180737 2.328 ENSMUST00000104999.2
 Nrarp
Notch-regulated ankyrin repeat protein
chr1_+_135729147 1.401 ENSMUST00000027677.7
 Csrp1
cysteine and glycine-rich protein 1
chr2_-_36104060 1.179 ENSMUST00000112961.3
ENSMUST00000112966.3
 Lhx6

LIM homeobox protein 6

chr7_+_96210107 0.949 ENSMUST00000138760.1
 Tenm4
teneurin transmembrane protein 4
chr8_-_11008458 0.948 ENSMUST00000040514.6
 Irs2
insulin receptor substrate 2
chr1_+_19103022 0.917 ENSMUST00000037294.7
 Tfap2d
transcription factor AP-2, delta
chr4_-_58499398 0.900 ENSMUST00000107570.1
 Lpar1
lysophosphatidic acid receptor 1
chr18_+_69593361 0.879 ENSMUST00000114978.2
ENSMUST00000114977.1
 Tcf4

transcription factor 4

chr7_-_121035096 0.561 ENSMUST00000065740.2
 Gm9905
predicted gene 9905
chr7_-_132813095 0.540 ENSMUST00000106165.1
 Fam53b
family with sequence similarity 53, member B
chr19_-_19001099 0.510 ENSMUST00000040153.8
ENSMUST00000112828.1
 Rorb

RAR-related orphan receptor beta

chr15_-_50890396 0.507 ENSMUST00000185183.1
 Trps1
trichorhinophalangeal syndrome I (human)
chr3_-_141982224 0.493 ENSMUST00000029948.8
 Bmpr1b
bone morphogenetic protein receptor, type 1B
chr12_+_24708984 0.431 ENSMUST00000154588.1
 Rrm2
ribonucleotide reductase M2
chr10_+_53596936 0.404 ENSMUST00000020004.6
 Asf1a
ASF1 anti-silencing function 1 homolog A (S. cerevisiae)
chr3_+_60501252 0.394 ENSMUST00000099087.2
 Mbnl1
muscleblind-like 1 (Drosophila)
chr1_+_39900883 0.356 ENSMUST00000163854.2
ENSMUST00000168431.1
 Map4k4

mitogen-activated protein kinase kinase kinase kinase 4

chr14_+_79515618 0.315 ENSMUST00000110835.1
 Elf1
E74-like factor 1

Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Showing 1 to 20 of 20 entries
Log-likelihood per target Total log-likelihoodTermDescription
0.2 2.8 GO:0021684 cerebellar granular layer formation(GO:0021684) cerebellar granule cell differentiation(GO:0021707)
0.4 2.5 GO:0071699 olfactory placode formation(GO:0030910) olfactory placode development(GO:0071698) olfactory placode morphogenesis(GO:0071699)
0.2 2.3 GO:0014807 regulation of somitogenesis(GO:0014807)
0.0 1.4 GO:0070527 platelet aggregation(GO:0070527)
0.2 1.2 GO:1904936 cerebral cortex GABAergic interneuron migration(GO:0021853) interneuron migration(GO:1904936)
0.2 0.9 GO:0032289 central nervous system myelin formation(GO:0032289) cardiac cell fate specification(GO:0060912)
0.2 0.9 GO:1904565 response to 1-oleoyl-sn-glycerol 3-phosphate(GO:1904565) cellular response to 1-oleoyl-sn-glycerol 3-phosphate(GO:1904566)
0.1 0.9 GO:0002903 negative regulation of B cell apoptotic process(GO:0002903)
0.1 0.9 GO:0042118 endothelial cell activation(GO:0042118)
0.0 0.9 GO:0030901 midbrain development(GO:0030901)
0.1 0.5 GO:0001550 ovarian cumulus expansion(GO:0001550) fused antrum stage(GO:0048165)
0.1 0.5 GO:0046549 retinal cone cell development(GO:0046549)
0.0 0.5 GO:1902043 positive regulation of extrinsic apoptotic signaling pathway via death domain receptors(GO:1902043)
0.0 0.4 GO:0009186 deoxyribonucleoside diphosphate metabolic process(GO:0009186)
0.0 0.4 GO:0061179 negative regulation of insulin secretion involved in cellular response to glucose stimulus(GO:0061179)
0.0 0.4 GO:0034723 DNA replication-dependent nucleosome assembly(GO:0006335) DNA replication-independent nucleosome assembly(GO:0006336) DNA replication-dependent nucleosome organization(GO:0034723) DNA replication-independent nucleosome organization(GO:0034724)
0.1 0.3 GO:0003192 mitral valve formation(GO:0003192) cell migration involved in endocardial cushion formation(GO:0003273) condensed mesenchymal cell proliferation(GO:0072137)
0.0 0.3 GO:0050860 negative regulation of T cell receptor signaling pathway(GO:0050860)
0.0 0.2 GO:0031937 positive regulation of chromatin silencing(GO:0031937)
0.0 0.1 GO:0060648 mammary gland bud morphogenesis(GO:0060648)

Gene overrepresentation in cellular_component category:

Showing 1 to 2 of 2 entries
Log-likelihood per target Total log-likelihoodTermDescription
0.0 2.5 GO:0044798 nuclear transcription factor complex(GO:0044798)
0.1 0.4 GO:0005971 ribonucleoside-diphosphate reductase complex(GO:0005971)

Gene overrepresentation in molecular_function category:

Showing 1 to 9 of 9 entries
Log-likelihood per target Total log-likelihoodTermDescription
0.1 2.5 GO:0035198 miRNA binding(GO:0035198)
0.2 0.9 GO:0001011 transcription factor activity, sequence-specific DNA binding, RNA polymerase recruiting(GO:0001011) transcription factor activity, TFIIB-class binding(GO:0001087)
0.2 0.9 GO:0035727 lysophosphatidic acid binding(GO:0035727) lysophosphatidic acid receptor activity(GO:0070915)
0.0 0.9 GO:0071889 14-3-3 protein binding(GO:0071889)
0.2 0.5 GO:0008502 melatonin receptor activity(GO:0008502)
0.1 0.5 GO:0005025 transforming growth factor beta receptor activity, type I(GO:0005025)
0.1 0.4 GO:0001069 regulatory region RNA binding(GO:0001069)
0.1 0.4 GO:0004111 creatine kinase activity(GO:0004111)
0.1 0.4 GO:0061731 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor(GO:0004748) oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor(GO:0016728) ribonucleoside-diphosphate reductase activity(GO:0061731)