Motif ID: Chd1_Pml
Z-value: 2.911


Transcription factors associated with Chd1_Pml:
Gene Symbol | Entrez ID | Gene Name |
---|---|---|
Chd1 | ENSMUSG00000023852.7 | Chd1 |
Pml | ENSMUSG00000036986.10 | Pml |
Activity-expression correlation:
Gene Symbol | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Chd1 | mm10_v2_chr17_+_15704963_15704994 | 0.72 | 1.1e-04 | Click! |
Pml | mm10_v2_chr9_-_58249702_58249791 | -0.37 | 8.2e-02 | Click! |
Top targets:
Showing 1 to 20 of 200 entries
Gene overrepresentation in biological_process category:
Showing 1 to 20 of 1,032 entries
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.5 | 21.4 | GO:0002087 | regulation of respiratory gaseous exchange by neurological system process(GO:0002087) |
0.1 | 19.9 | GO:0042787 | protein ubiquitination involved in ubiquitin-dependent protein catabolic process(GO:0042787) |
1.3 | 19.4 | GO:0035563 | positive regulation of chromatin binding(GO:0035563) |
2.8 | 16.6 | GO:0060024 | rhythmic synaptic transmission(GO:0060024) |
1.7 | 15.0 | GO:0046499 | S-adenosylmethioninamine metabolic process(GO:0046499) |
1.8 | 14.1 | GO:0035726 | common myeloid progenitor cell proliferation(GO:0035726) |
1.4 | 12.7 | GO:0060059 | embryonic retina morphogenesis in camera-type eye(GO:0060059) |
0.9 | 11.8 | GO:0015732 | prostaglandin transport(GO:0015732) |
2.9 | 11.4 | GO:0051643 | endoplasmic reticulum localization(GO:0051643) |
0.9 | 11.4 | GO:0060213 | regulation of nuclear-transcribed mRNA poly(A) tail shortening(GO:0060211) positive regulation of nuclear-transcribed mRNA poly(A) tail shortening(GO:0060213) |
3.7 | 11.1 | GO:0003221 | right ventricular cardiac muscle tissue morphogenesis(GO:0003221) |
2.2 | 10.9 | GO:0002182 | cytoplasmic translational elongation(GO:0002182) regulation of cytoplasmic translational elongation(GO:1900247) negative regulation of cytoplasmic translational elongation(GO:1900248) |
0.6 | 10.1 | GO:1902857 | positive regulation of nonmotile primary cilium assembly(GO:1902857) |
1.3 | 10.0 | GO:2000301 | negative regulation of synaptic vesicle exocytosis(GO:2000301) |
0.5 | 10.0 | GO:0007064 | mitotic sister chromatid cohesion(GO:0007064) |
1.0 | 9.9 | GO:0008063 | Toll signaling pathway(GO:0008063) |
0.7 | 9.5 | GO:0061000 | negative regulation of dendritic spine development(GO:0061000) |
0.6 | 9.5 | GO:0042492 | gamma-delta T cell differentiation(GO:0042492) |
0.3 | 9.3 | GO:0001709 | cell fate determination(GO:0001709) |
2.3 | 9.2 | GO:0044861 | protein transport into plasma membrane raft(GO:0044861) |
Gene overrepresentation in cellular_component category:
Showing 1 to 20 of 339 entries
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 227.6 | GO:0005634 | nucleus(GO:0005634) |
0.6 | 24.7 | GO:0005891 | voltage-gated calcium channel complex(GO:0005891) |
0.1 | 24.2 | GO:0000151 | ubiquitin ligase complex(GO:0000151) |
0.8 | 18.9 | GO:0001741 | XY body(GO:0001741) |
0.3 | 16.7 | GO:0000932 | cytoplasmic mRNA processing body(GO:0000932) |
0.3 | 14.8 | GO:0005881 | cytoplasmic microtubule(GO:0005881) |
0.3 | 14.8 | GO:0031463 | Cul3-RING ubiquitin ligase complex(GO:0031463) |
0.1 | 14.4 | GO:0005874 | microtubule(GO:0005874) |
0.2 | 13.5 | GO:0016605 | PML body(GO:0016605) |
0.7 | 13.2 | GO:1990124 | messenger ribonucleoprotein complex(GO:1990124) |
0.8 | 13.0 | GO:0097470 | ribbon synapse(GO:0097470) |
0.1 | 12.1 | GO:0005681 | spliceosomal complex(GO:0005681) |
3.8 | 11.4 | GO:0042642 | actomyosin, myosin complex part(GO:0042642) |
0.2 | 11.4 | GO:0005814 | centriole(GO:0005814) |
1.0 | 11.2 | GO:0005892 | acetylcholine-gated channel complex(GO:0005892) |
0.1 | 11.1 | GO:0016604 | nuclear body(GO:0016604) |
0.1 | 10.8 | GO:0009898 | cytoplasmic side of plasma membrane(GO:0009898) |
0.3 | 10.7 | GO:0090544 | BAF-type complex(GO:0090544) |
0.2 | 10.7 | GO:0005844 | polysome(GO:0005844) |
0.6 | 9.9 | GO:0030014 | CCR4-NOT complex(GO:0030014) |
Gene overrepresentation in molecular_function category:
Showing 1 to 20 of 524 entries
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 46.8 | GO:0044822 | poly(A) RNA binding(GO:0044822) |
0.2 | 44.1 | GO:0043774 | UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity(GO:0008766) ribosomal S6-glutamic acid ligase activity(GO:0018169) coenzyme F420-0 gamma-glutamyl ligase activity(GO:0043773) coenzyme F420-2 alpha-glutamyl ligase activity(GO:0043774) protein-glycine ligase activity(GO:0070735) protein-glycine ligase activity, initiating(GO:0070736) protein-glycine ligase activity, elongating(GO:0070737) tubulin-glycine ligase activity(GO:0070738) |
0.2 | 29.3 | GO:0008017 | microtubule binding(GO:0008017) |
1.1 | 28.6 | GO:0008187 | poly-pyrimidine tract binding(GO:0008187) |
0.6 | 26.7 | GO:0005245 | voltage-gated calcium channel activity(GO:0005245) |
0.2 | 24.3 | GO:0061659 | ubiquitin-like protein ligase activity(GO:0061659) |
0.1 | 23.6 | GO:0001077 | transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding(GO:0001077) |
0.3 | 23.3 | GO:0035064 | methylated histone binding(GO:0035064) |
0.4 | 21.7 | GO:0005546 | phosphatidylinositol-4,5-bisphosphate binding(GO:0005546) |
0.2 | 17.2 | GO:0042393 | histone binding(GO:0042393) |
0.4 | 15.1 | GO:0001205 | transcriptional activator activity, RNA polymerase II distal enhancer sequence-specific binding(GO:0001205) |
1.9 | 15.0 | GO:0051718 | DNA (cytosine-5-)-methyltransferase activity(GO:0003886) DNA (cytosine-5-)-methyltransferase activity, acting on CpG substrates(GO:0051718) |
0.1 | 13.5 | GO:0003714 | transcription corepressor activity(GO:0003714) |
1.4 | 12.6 | GO:0001972 | retinoic acid binding(GO:0001972) |
1.2 | 12.4 | GO:0048027 | mRNA 5'-UTR binding(GO:0048027) |
0.3 | 12.2 | GO:0046875 | ephrin receptor binding(GO:0046875) |
0.1 | 12.2 | GO:0017137 | Rab GTPase binding(GO:0017137) |
1.3 | 12.1 | GO:0001206 | transcriptional repressor activity, RNA polymerase II distal enhancer sequence-specific binding(GO:0001206) |
0.6 | 12.0 | GO:0070577 | lysine-acetylated histone binding(GO:0070577) |
1.5 | 11.8 | GO:0046790 | virion binding(GO:0046790) |