Motif ID: Hoxd9

Z-value: 0.587


Transcription factors associated with Hoxd9:

Gene SymbolEntrez IDGene Name
Hoxd9 ENSMUSG00000043342.8 Hoxd9



Activity profile for motif Hoxd9.

activity profile for motif Hoxd9


Sorted Z-values histogram for motif Hoxd9

Sorted Z-values for motif Hoxd9



Network of associatons between targets according to the STRING database.



First level regulatory network of Hoxd9

PNG image of the network

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Top targets:


Showing 1 to 20 of 100 entries
PromoterScoreRefseqGene SymbolGene Name
chr6_-_36811361 2.730 ENSMUST00000101534.1
 Ptn
pleiotrophin
chr8_+_84723003 2.568 ENSMUST00000098571.4
 G430095P16Rik
RIKEN cDNA G430095P16 gene
chr3_-_116129615 2.488 ENSMUST00000029574.8
 Vcam1
vascular cell adhesion molecule 1
chr7_+_66365905 2.356 ENSMUST00000107486.1
 Gm10974
predicted gene 10974
chrX_+_82948861 2.256 ENSMUST00000114000.1
 Dmd
dystrophin, muscular dystrophy
chr7_-_103827922 1.819 ENSMUST00000023934.6
ENSMUST00000153218.1
 Hbb-bs

hemoglobin, beta adult s chain

chr3_-_49757257 1.672 ENSMUST00000035931.7
 Pcdh18
protocadherin 18
chr2_-_63184253 1.478 ENSMUST00000075052.3
ENSMUST00000112454.1
 Kcnh7

potassium voltage-gated channel, subfamily H (eag-related), member 7

chr5_-_77408034 1.459 ENSMUST00000163898.1
ENSMUST00000046746.6
 Igfbp7

insulin-like growth factor binding protein 7

chr13_-_105271039 1.371 ENSMUST00000069686.6
 Rnf180
ring finger protein 180
chr3_+_35754121 1.240 ENSMUST00000108186.1
ENSMUST00000029257.8
 Atp11b

ATPase, class VI, type 11B

chr17_-_78684262 1.238 ENSMUST00000145480.1
 Strn
striatin, calmodulin binding protein
chr3_+_114030532 1.145 ENSMUST00000123619.1
ENSMUST00000092155.5
 Col11a1

collagen, type XI, alpha 1

chrX_+_85048309 1.085 ENSMUST00000113991.1
ENSMUST00000113992.2
 Dmd

dystrophin, muscular dystrophy

chr15_-_65014904 1.084 ENSMUST00000110100.2
 Gm21961
predicted gene, 21961
chr5_-_62766153 1.079 ENSMUST00000076623.4
 Arap2
ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
chr2_-_63184170 1.061 ENSMUST00000112452.1
 Kcnh7
potassium voltage-gated channel, subfamily H (eag-related), member 7
chr7_+_120851183 0.997 ENSMUST00000106487.1
ENSMUST00000143322.1
ENSMUST00000106488.1
 Eef2k


eukaryotic elongation factor-2 kinase


chr13_-_74376566 0.960 ENSMUST00000091481.2
 Zfp72
zinc finger protein 72
chr2_+_67748212 0.949 ENSMUST00000180887.1
 B3galt1
UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1

Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Showing 1 to 20 of 46 entries
Log-likelihood per target Total log-likelihoodTermDescription
1.1 3.3 GO:0008065 establishment of blood-nerve barrier(GO:0008065) regulation of skeletal muscle contraction by regulation of release of sequestered calcium ion(GO:0014809)
0.9 2.7 GO:1904395 regulation of skeletal muscle acetylcholine-gated channel clustering(GO:1904393) positive regulation of skeletal muscle acetylcholine-gated channel clustering(GO:1904395)
0.2 2.5 GO:0061032 visceral serous pericardium development(GO:0061032)
0.0 2.5 GO:0051291 protein heterooligomerization(GO:0051291)
0.1 1.7 GO:0016339 calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules(GO:0016339)
0.0 1.5 GO:0050810 regulation of steroid biosynthetic process(GO:0050810)
0.1 1.4 GO:0042415 norepinephrine metabolic process(GO:0042415)
0.2 1.1 GO:0035989 tendon development(GO:0035989)
0.1 1.0 GO:0044791 modulation by host of viral release from host cell(GO:0044789) positive regulation by host of viral release from host cell(GO:0044791)
0.0 1.0 GO:0061003 positive regulation of dendritic spine morphogenesis(GO:0061003)
0.2 0.9 GO:0098915 membrane repolarization during ventricular cardiac muscle cell action potential(GO:0098915)
0.1 0.9 GO:0015840 urea transport(GO:0015840) urea transmembrane transport(GO:0071918)
0.1 0.9 GO:0009312 oligosaccharide biosynthetic process(GO:0009312)
0.0 0.9 GO:0002495 antigen processing and presentation of peptide antigen via MHC class II(GO:0002495)
0.0 0.9 GO:0071398 cellular response to fatty acid(GO:0071398)
0.0 0.9 GO:0008542 visual learning(GO:0008542)
0.1 0.8 GO:0031848 protection from non-homologous end joining at telomere(GO:0031848)
0.1 0.7 GO:0048664 neuron fate determination(GO:0048664)
0.0 0.7 GO:0032148 activation of protein kinase B activity(GO:0032148)
0.1 0.6 GO:0060648 mammary gland bud morphogenesis(GO:0060648)

Gene overrepresentation in cellular_component category:

Showing 1 to 16 of 16 entries
Log-likelihood per target Total log-likelihoodTermDescription
0.2 3.6 GO:0016010 dystrophin-associated glycoprotein complex(GO:0016010) glycoprotein complex(GO:0090665)
0.0 2.8 GO:0031594 neuromuscular junction(GO:0031594)
0.1 2.5 GO:0002102 podosome(GO:0002102)
0.5 1.8 GO:0031838 haptoglobin-hemoglobin complex(GO:0031838)
0.1 1.2 GO:0000159 protein phosphatase type 2A complex(GO:0000159)
0.1 1.1 GO:0098643 fibrillar collagen trimer(GO:0005583) banded collagen fibril(GO:0098643)
0.0 0.9 GO:0032588 trans-Golgi network membrane(GO:0032588)
0.0 0.9 GO:0008076 voltage-gated potassium channel complex(GO:0008076)
0.1 0.5 GO:0000120 RNA polymerase I transcription factor complex(GO:0000120)
0.0 0.5 GO:0033179 proton-transporting V-type ATPase, V0 domain(GO:0033179)
0.0 0.5 GO:0097539 ciliary transition fiber(GO:0097539)
0.0 0.4 GO:0000815 ESCRT III complex(GO:0000815)
0.0 0.3 GO:0002116 semaphorin receptor complex(GO:0002116)
0.0 0.3 GO:0017119 Golgi transport complex(GO:0017119)
0.1 0.2 GO:0005943 phosphatidylinositol 3-kinase complex, class IA(GO:0005943)
0.0 0.2 GO:0033269 internode region of axon(GO:0033269)

Gene overrepresentation in molecular_function category:

Showing 1 to 20 of 32 entries
Log-likelihood per target Total log-likelihoodTermDescription
0.2 3.3 GO:0017166 dystroglycan binding(GO:0002162) vinculin binding(GO:0017166)
0.9 2.7 GO:0035373 chondroitin sulfate proteoglycan binding(GO:0035373)
0.2 2.6 GO:0005242 inward rectifier potassium channel activity(GO:0005242)
0.6 2.5 GO:0008131 primary amine oxidase activity(GO:0008131)
0.5 1.8 GO:0031721 haptoglobin binding(GO:0031720) hemoglobin alpha binding(GO:0031721)
0.1 1.5 GO:0005520 insulin-like growth factor binding(GO:0005520)
0.0 1.4 GO:0031624 ubiquitin conjugating enzyme binding(GO:0031624)
0.0 1.3 GO:0005547 phosphatidylinositol-3,4,5-trisphosphate binding(GO:0005547)
0.1 1.2 GO:0004012 phospholipid-translocating ATPase activity(GO:0004012)
0.0 1.2 GO:0070016 armadillo repeat domain binding(GO:0070016)
0.0 1.1 GO:0005201 extracellular matrix structural constituent(GO:0005201)
0.3 1.0 GO:0004686 elongation factor-2 kinase activity(GO:0004686)
0.3 0.9 GO:1902282 voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization(GO:1902282)
0.2 0.9 GO:0015265 urea channel activity(GO:0015265)
0.1 0.9 GO:0008499 UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity(GO:0008499)
0.0 0.9 GO:0042287 MHC protein binding(GO:0042287)
0.0 0.9 GO:0005504 fatty acid binding(GO:0005504)
0.1 0.8 GO:0035312 5'-3' exodeoxyribonuclease activity(GO:0035312)
0.0 0.8 GO:0050136 NADH dehydrogenase (ubiquinone) activity(GO:0008137) NADH dehydrogenase (quinone) activity(GO:0050136)
0.0 0.7 GO:0043422 protein kinase B binding(GO:0043422)