Motif ID: Prdm1

Z-value: 1.214


Transcription factors associated with Prdm1:

Gene SymbolEntrez IDGene Name
Prdm1 ENSMUSG00000038151.6 Prdm1



Activity profile for motif Prdm1.

activity profile for motif Prdm1


Sorted Z-values histogram for motif Prdm1

Sorted Z-values for motif Prdm1



Network of associatons between targets according to the STRING database.



First level regulatory network of Prdm1

PNG image of the network

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Top targets:


Showing 1 to 20 of 200 entries
PromoterScoreRefseqGene SymbolGene Name
chr8_-_84800024 7.335 ENSMUST00000126806.1
ENSMUST00000076715.6
 Nfix

nuclear factor I/X

chr8_-_84800344 7.266 ENSMUST00000099070.3
 Nfix
nuclear factor I/X
chr4_+_48049080 6.635 ENSMUST00000153369.1
 Nr4a3
nuclear receptor subfamily 4, group A, member 3
chr3_-_107760221 6.470 ENSMUST00000153114.1
ENSMUST00000118593.1
ENSMUST00000120243.1
 Csf1


colony stimulating factor 1 (macrophage)


chr4_-_154636831 6.065 ENSMUST00000030902.6
ENSMUST00000105637.1
ENSMUST00000070313.7
ENSMUST00000105636.1
ENSMUST00000105638.2
ENSMUST00000097759.2
ENSMUST00000124771.1
 Prdm16






PR domain containing 16






chr5_+_3343893 5.600 ENSMUST00000165117.1
 Cdk6
cyclin-dependent kinase 6
chr1_-_56978534 5.159 ENSMUST00000177282.1
 Satb2
special AT-rich sequence binding protein 2
chr1_-_156674290 4.924 ENSMUST00000079625.4
 Tor3a
torsin family 3, member A
chr11_-_77894096 4.193 ENSMUST00000017597.4
 Pipox
pipecolic acid oxidase
chr16_+_43363855 3.935 ENSMUST00000156367.1
 Zbtb20
zinc finger and BTB domain containing 20
chr2_+_116067213 3.892 ENSMUST00000152412.1
 G630016G05Rik
RIKEN cDNA G630016G05 gene
chr15_+_32920723 3.702 ENSMUST00000022871.5
 Sdc2
syndecan 2
chr9_-_107668967 3.642 ENSMUST00000177567.1
 Slc38a3
solute carrier family 38, member 3
chr16_+_43364145 3.398 ENSMUST00000148775.1
 Zbtb20
zinc finger and BTB domain containing 20
chr4_-_96591555 3.337 ENSMUST00000055693.8
 Cyp2j9
cytochrome P450, family 2, subfamily j, polypeptide 9
chr6_+_117168535 3.320 ENSMUST00000112866.1
ENSMUST00000112871.1
ENSMUST00000073043.4
 Cxcl12


chemokine (C-X-C motif) ligand 12


chr13_-_23430826 3.140 ENSMUST00000153753.1
ENSMUST00000141543.1
 C230035I16Rik

RIKEN cDNA C230035I16 gene

chr3_-_101604580 2.871 ENSMUST00000036493.6
 Atp1a1
ATPase, Na+/K+ transporting, alpha 1 polypeptide
chr3_-_9833617 2.664 ENSMUST00000108384.2
 Pag1
phosphoprotein associated with glycosphingolipid microdomains 1
chr12_+_83987854 2.646 ENSMUST00000021649.7
 Acot2
acyl-CoA thioesterase 2

Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Showing 1 to 20 of 94 entries
Log-likelihood per target Total log-likelihoodTermDescription
1.0 14.6 GO:0021684 cerebellar granular layer formation(GO:0021684) cerebellar granule cell differentiation(GO:0021707)
1.0 7.3 GO:0090336 positive regulation of brown fat cell differentiation(GO:0090336)
0.2 7.3 GO:0032728 positive regulation of interferon-beta production(GO:0032728)
2.4 7.2 GO:0032765 positive regulation of mast cell cytokine production(GO:0032765)
2.2 6.5 GO:1904139 microglial cell migration(GO:1904124) regulation of microglial cell migration(GO:1904139)
1.9 5.6 GO:0043696 dedifferentiation(GO:0043696) cell dedifferentiation(GO:0043697)
0.3 5.2 GO:0021902 commitment of neuronal cell to specific neuron type in forebrain(GO:0021902)
0.1 4.4 GO:0050868 negative regulation of T cell activation(GO:0050868)
1.4 4.2 GO:0006553 lysine metabolic process(GO:0006553)
0.0 3.7 GO:0048814 regulation of dendrite morphogenesis(GO:0048814)
0.9 3.6 GO:0006867 asparagine transport(GO:0006867) glutamine transport(GO:0006868)
0.2 3.5 GO:2001275 positive regulation of glucose import in response to insulin stimulus(GO:2001275)
1.1 3.4 GO:0042196 dichloromethane metabolic process(GO:0018900) chlorinated hydrocarbon metabolic process(GO:0042196) halogenated hydrocarbon metabolic process(GO:0042197)
0.8 3.3 GO:1903237 negative regulation of leukocyte tethering or rolling(GO:1903237)
0.2 3.3 GO:0019369 arachidonic acid metabolic process(GO:0019369)
1.0 3.1 GO:0006001 fructose catabolic process(GO:0006001) fructose catabolic process to hydroxyacetone phosphate and glyceraldehyde-3-phosphate(GO:0061624) glycolytic process through fructose-1-phosphate(GO:0061625)
0.7 2.9 GO:1903416 response to glycoside(GO:1903416)
0.3 2.6 GO:0042760 very long-chain fatty acid catabolic process(GO:0042760)
0.0 2.6 GO:0008654 phospholipid biosynthetic process(GO:0008654)
0.3 2.4 GO:0043553 negative regulation of phosphatidylinositol 3-kinase activity(GO:0043553)

Gene overrepresentation in cellular_component category:

Showing 1 to 20 of 45 entries
Log-likelihood per target Total log-likelihoodTermDescription
0.0 6.7 GO:0005925 focal adhesion(GO:0005925)
2.2 6.5 GO:1990682 CSF1-CSF1R complex(GO:1990682)
0.1 6.1 GO:0005788 endoplasmic reticulum lumen(GO:0005788)
0.0 5.2 GO:0000118 histone deacetylase complex(GO:0000118)
0.0 5.0 GO:0045121 membrane raft(GO:0045121) membrane microdomain(GO:0098857)
0.1 4.8 GO:0017053 transcriptional repressor complex(GO:0017053)
0.0 4.7 GO:0005667 transcription factor complex(GO:0005667)
0.0 4.4 GO:0005777 peroxisome(GO:0005777) microbody(GO:0042579)
0.1 3.7 GO:0000307 cyclin-dependent protein kinase holoenzyme complex(GO:0000307)
0.0 3.6 GO:0016363 nuclear matrix(GO:0016363)
0.0 3.5 GO:0009897 external side of plasma membrane(GO:0009897)
0.4 2.9 GO:0005890 sodium:potassium-exchanging ATPase complex(GO:0005890)
0.0 2.7 GO:0016323 basolateral plasma membrane(GO:0016323)
0.6 1.9 GO:0005588 collagen type V trimer(GO:0005588)
0.0 1.6 GO:0005834 heterotrimeric G-protein complex(GO:0005834)
0.2 1.1 GO:0030870 Mre11 complex(GO:0030870)
0.0 1.1 GO:0031941 filamentous actin(GO:0031941)
0.0 1.0 GO:0033270 paranode region of axon(GO:0033270)
0.0 1.0 GO:0005811 lipid particle(GO:0005811)
0.0 1.0 GO:0031519 PcG protein complex(GO:0031519)

Gene overrepresentation in molecular_function category:

Showing 1 to 20 of 77 entries
Log-likelihood per target Total log-likelihoodTermDescription
0.0 16.3 GO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001228)
0.1 8.2 GO:0001078 transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding(GO:0001078)
0.4 6.4 GO:0001223 transcription coactivator binding(GO:0001223)
0.1 6.0 GO:0033613 activating transcription factor binding(GO:0033613)
0.1 5.6 GO:0030332 cyclin binding(GO:0030332)
0.1 5.0 GO:0008083 growth factor activity(GO:0008083)
0.5 4.8 GO:0005068 transmembrane receptor protein tyrosine kinase adaptor activity(GO:0005068)
1.0 4.2 GO:0016647 oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor(GO:0016647)
0.2 4.0 GO:0003950 NAD+ ADP-ribosyltransferase activity(GO:0003950)
0.7 3.6 GO:0015186 L-asparagine transmembrane transporter activity(GO:0015182) L-glutamine transmembrane transporter activity(GO:0015186)
0.3 3.5 GO:0016443 bidentate ribonuclease III activity(GO:0016443)
1.1 3.4 GO:0019120 hydrolase activity, acting on acid halide bonds(GO:0016824) hydrolase activity, acting on acid halide bonds, in C-halide compounds(GO:0019120) alkylhalidase activity(GO:0047651)
0.7 3.3 GO:0008392 arachidonic acid monooxygenase activity(GO:0008391) arachidonic acid epoxygenase activity(GO:0008392)
0.3 3.3 GO:0045236 CXCR chemokine receptor binding(GO:0045236)
1.0 3.1 GO:0004454 ketohexokinase activity(GO:0004454)
0.0 3.1 GO:0016836 hydro-lyase activity(GO:0016836)
0.4 2.9 GO:0103116 alpha-D-galactofuranose transporter activity(GO:0103116) steroid hormone binding(GO:1990239)
0.2 2.6 GO:0016290 palmitoyl-CoA hydrolase activity(GO:0016290)
0.1 2.6 GO:0003841 1-acylglycerol-3-phosphate O-acyltransferase activity(GO:0003841)
0.0 2.6 GO:0030165 PDZ domain binding(GO:0030165)