Motif ID: Rarb

Z-value: 0.347


Transcription factors associated with Rarb:

Gene SymbolEntrez IDGene Name
Rarb ENSMUSG00000017491.8 Rarb

Activity-expression correlation:

Gene SymbolPromoterPearson corr. coef.P-valuePlot
Rarbmm10_v2_chr14_-_16575456_16575501-0.666.4e-04Click!


Activity profile for motif Rarb.

activity profile for motif Rarb


Sorted Z-values histogram for motif Rarb

Sorted Z-values for motif Rarb



Network of associatons between targets according to the STRING database.



First level regulatory network of Rarb

PNG image of the network

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Top targets:


Promoter Score Refseq Gene Symbol Gene Name
chr1_+_90203980 2.357 ENSMUST00000065587.4
ENSMUST00000159654.1
 Ackr3

atypical chemokine receptor 3

chr11_+_83409655 0.654 ENSMUST00000175848.1
ENSMUST00000108140.3
 Rasl10b

RAS-like, family 10, member B

chr11_+_83409137 0.641 ENSMUST00000021022.3
 Rasl10b
RAS-like, family 10, member B
chr3_+_88081997 0.560 ENSMUST00000071812.5
 Iqgap3
IQ motif containing GTPase activating protein 3
chr11_-_45944910 0.510 ENSMUST00000129820.1
 Lsm11
U7 snRNP-specific Sm-like protein LSM11
chr5_+_92897981 0.472 ENSMUST00000113051.2
 Shroom3
shroom family member 3
chr1_+_191821444 0.461 ENSMUST00000027931.7
 Nek2
NIMA (never in mitosis gene a)-related expressed kinase 2
chr16_+_38346986 0.418 ENSMUST00000050273.8
ENSMUST00000120495.1
ENSMUST00000119704.1
 Cox17

Gm21987
cytochrome c oxidase assembly protein 17

predicted gene 21987
chr13_-_25270076 0.302 ENSMUST00000057866.6
 Nrsn1
neurensin 1
chr10_+_43524080 0.281 ENSMUST00000057649.6
 Gm9803
predicted gene 9803
chr15_-_98662858 0.267 ENSMUST00000162384.1
ENSMUST00000003450.8
 Ddx23

DEAD (Asp-Glu-Ala-Asp) box polypeptide 23

chr2_+_30281043 0.199 ENSMUST00000143119.2
 RP23-395P6.9
RP23-395P6.9
chr8_+_106683052 0.184 ENSMUST00000048359.4
 Tango6
transport and golgi organization 6
chr1_+_24177610 0.180 ENSMUST00000054588.8
 Col9a1
collagen, type IX, alpha 1
chr19_-_8786272 0.180 ENSMUST00000176610.1
ENSMUST00000177056.1
 Taf6l

TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor

chr7_-_116031047 0.180 ENSMUST00000106612.1
 Sox6
SRY-box containing gene 6
chr19_-_8786245 0.166 ENSMUST00000177216.1
 Taf6l
TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor
chr2_-_163417092 0.165 ENSMUST00000127038.1
 Oser1
oxidative stress responsive serine rich 1
chr7_+_108934405 0.160 ENSMUST00000033342.6
 Eif3f
eukaryotic translation initiation factor 3, subunit F
chr19_-_8786408 0.149 ENSMUST00000176496.1
 Taf6l
TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor
chr18_+_65582390 0.145 ENSMUST00000169679.1
ENSMUST00000183326.1
 Zfp532

zinc finger protein 532

chr1_+_4807823 0.075 ENSMUST00000027036.4
ENSMUST00000119612.2
ENSMUST00000137887.1
ENSMUST00000115529.1
ENSMUST00000150971.1
 Lypla1




lysophospholipase 1




chr17_+_37045963 0.071 ENSMUST00000025338.9
 Gabbr1
gamma-aminobutyric acid (GABA) B receptor, 1
chr9_+_56937462 0.058 ENSMUST00000034827.8
 Imp3
IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)
chr10_-_92722356 0.056 ENSMUST00000020163.6
 Nedd1
neural precursor cell expressed, developmentally down-regulated gene 1
chr8_+_36489191 0.020 ENSMUST00000171777.1
 6430573F11Rik
RIKEN cDNA 6430573F11 gene

Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.5 GO:0030997 regulation of centriole-centriole cohesion(GO:0030997)
0.1 0.6 GO:0033601 positive regulation of mammary gland epithelial cell proliferation(GO:0033601)
0.1 2.4 GO:1902230 negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage(GO:1902230)
0.1 0.5 GO:0006398 mRNA 3'-end processing by stem-loop binding and cleavage(GO:0006398)
0.0 1.0 GO:0001990 regulation of systemic arterial blood pressure by hormone(GO:0001990)
0.0 0.2 GO:0075522 IRES-dependent viral translational initiation(GO:0075522)
0.0 0.2 GO:2000741 positive regulation of mesenchymal stem cell differentiation(GO:2000741)
0.0 0.1 GO:0042997 negative regulation of Golgi to plasma membrane protein transport(GO:0042997)

Gene overrepresentation in cellular_component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.5 GO:0005683 U7 snRNP(GO:0005683)
0.0 0.2 GO:0005594 collagen type IX trimer(GO:0005594)
0.0 2.4 GO:0005905 clathrin-coated pit(GO:0005905)
0.0 0.5 GO:0030914 STAGA complex(GO:0030914)
0.0 0.1 GO:0034457 Mpp10 complex(GO:0034457)
0.0 0.3 GO:0005682 U5 snRNP(GO:0005682)
0.0 0.2 GO:0071541 eukaryotic translation initiation factor 3 complex, eIF3m(GO:0071541)
0.0 0.1 GO:0000931 gamma-tubulin large complex(GO:0000931) gamma-tubulin ring complex(GO:0008274)

Gene overrepresentation in molecular_function category:

Log-likelihood per target  Total log-likelihood Term Description
0.8 2.4 GO:0016494 C-X-C chemokine receptor activity(GO:0016494) C-X-C chemokine binding(GO:0019958)
0.2 0.5 GO:0071209 U7 snRNA binding(GO:0071209)
0.1 0.6 GO:0032027 myosin light chain binding(GO:0032027)
0.0 0.1 GO:0030519 snoRNP binding(GO:0030519)