Motif ID: Arid5b

Z-value: 0.263


Transcription factors associated with Arid5b:

Gene SymbolEntrez IDGene Name
Arid5b ENSMUSG00000019947.9 Arid5b

Activity-expression correlation:

Gene SymbolPromoterPearson corr. coef.P-valuePlot
Arid5bmm10_v2_chr10_-_68278713_68278735-0.132.6e-01Click!


Activity profile for motif Arid5b.

activity profile for motif Arid5b


Sorted Z-values histogram for motif Arid5b

Sorted Z-values for motif Arid5b



Network of associatons between targets according to the STRING database.



First level regulatory network of Arid5b

PNG image of the network

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Top targets:


Showing 1 to 20 of 73 entries
PromoterScoreRefseqGene SymbolGene Name
chr10_-_6980376 1.572 ENSMUST00000105617.1
 Ipcef1
interaction protein for cytohesin exchange factors 1
chr9_+_21196705 1.245 ENSMUST00000003395.9
 Pde4a
phosphodiesterase 4A, cAMP specific
chr10_-_109010955 1.063 ENSMUST00000105276.1
ENSMUST00000064054.7
 Syt1

synaptotagmin I

chr3_-_95882031 0.765 ENSMUST00000161994.1
 Gm129
predicted gene 129
chr9_+_112227443 0.706 ENSMUST00000161216.1
 2310075C17Rik
RIKEN cDNA 2310075C17 gene
chr9_+_87022014 0.663 ENSMUST00000168529.2
ENSMUST00000174724.1
ENSMUST00000173126.1
 Cyb5r4


cytochrome b5 reductase 4


chr15_-_13173607 0.662 ENSMUST00000036439.4
 Cdh6
cadherin 6
chr18_+_62662108 0.662 ENSMUST00000163259.1
 Gm17732
predicted gene, 17732
chr8_-_119840522 0.615 ENSMUST00000168698.1
ENSMUST00000034285.6
 Cotl1

coactosin-like 1 (Dictyostelium)

chr12_-_24680890 0.543 ENSMUST00000156453.2
 Cys1
cystin 1
chr3_-_19264959 0.523 ENSMUST00000121951.1
 Pde7a
phosphodiesterase 7A
chr5_-_31697598 0.494 ENSMUST00000031018.7
 Rbks
ribokinase
chr3_-_95882193 0.470 ENSMUST00000159863.1
ENSMUST00000159739.1
ENSMUST00000036418.3
 Gm129


predicted gene 129


chr7_-_67645195 0.456 ENSMUST00000032775.5
ENSMUST00000053950.2
 Lrrc28

leucine rich repeat containing 28

chr9_-_45984816 0.445 ENSMUST00000172450.1
 Pafah1b2
platelet-activating factor acetylhydrolase, isoform 1b, subunit 2
chr13_+_21735055 0.431 ENSMUST00000087714.4
 Hist1h4j
histone cluster 1, H4j
chr1_+_180568913 0.421 ENSMUST00000027777.6
 Parp1
poly (ADP-ribose) polymerase family, member 1
chrX_-_157492280 0.413 ENSMUST00000112529.1
 Sms
spermine synthase
chr8_-_79399513 0.409 ENSMUST00000066091.7
ENSMUST00000109885.1
ENSMUST00000066081.3
 Smad1


SMAD family member 1


chr16_+_32431225 0.391 ENSMUST00000115140.1
 Pcyt1a
phosphate cytidylyltransferase 1, choline, alpha isoform

Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Showing 1 to 20 of 22 entries
Log-likelihood per target Total log-likelihoodTermDescription
0.0 1.5 GO:0006198 cAMP catabolic process(GO:0006198)
0.1 1.1 GO:0005513 detection of calcium ion(GO:0005513)
0.0 0.7 GO:0006739 NADP metabolic process(GO:0006739)
0.0 0.6 GO:0050832 defense response to fungus(GO:0050832)
0.1 0.5 GO:0006014 D-ribose metabolic process(GO:0006014)
0.1 0.4 GO:1904760 myofibroblast differentiation(GO:0036446) regulation of myofibroblast differentiation(GO:1904760)
0.1 0.4 GO:0006597 spermine biosynthetic process(GO:0006597)
0.1 0.4 GO:0006657 CDP-choline pathway(GO:0006657)
0.1 0.4 GO:0002051 osteoblast fate commitment(GO:0002051)
0.0 0.4 GO:0016576 histone dephosphorylation(GO:0016576)
0.0 0.4 GO:0001842 neural fold formation(GO:0001842)
0.0 0.4 GO:0045653 negative regulation of megakaryocyte differentiation(GO:0045653)
0.1 0.3 GO:0060672 epithelial cell differentiation involved in embryonic placenta development(GO:0060671) epithelial cell morphogenesis involved in placental branching(GO:0060672)
0.1 0.3 GO:0072382 minus-end-directed vesicle transport along microtubule(GO:0072382)
0.0 0.3 GO:0002036 regulation of L-glutamate transport(GO:0002036)
0.0 0.3 GO:1900194 negative regulation of oocyte maturation(GO:1900194)
0.1 0.2 GO:2000620 positive regulation of histone H4-K16 acetylation(GO:2000620)
0.1 0.2 GO:0038128 ERBB2 signaling pathway(GO:0038128)
0.0 0.2 GO:0030854 positive regulation of granulocyte differentiation(GO:0030854)
0.0 0.1 GO:0046101 hypoxanthine metabolic process(GO:0046100) hypoxanthine biosynthetic process(GO:0046101)

Gene overrepresentation in cellular_component category:

Showing 1 to 9 of 9 entries
Log-likelihood per target Total log-likelihoodTermDescription
0.1 1.1 GO:0031045 dense core granule(GO:0031045)
0.1 0.4 GO:0090537 CERF complex(GO:0090537)
0.0 0.4 GO:0042587 glycogen granule(GO:0042587)
0.0 0.4 GO:0000788 nuclear nucleosome(GO:0000788)
0.0 0.3 GO:0002177 manchette(GO:0002177)
0.0 0.3 GO:0008074 guanylate cyclase complex, soluble(GO:0008074)
0.0 0.2 GO:0031616 spindle pole centrosome(GO:0031616)
0.0 0.1 GO:1990075 kinesin II complex(GO:0016939) periciliary membrane compartment(GO:1990075)
0.0 0.1 GO:0002189 ribose phosphate diphosphokinase complex(GO:0002189)

Gene overrepresentation in molecular_function category:

Showing 1 to 14 of 14 entries
Log-likelihood per target Total log-likelihoodTermDescription
0.1 2.0 GO:0004115 3',5'-cyclic-AMP phosphodiesterase activity(GO:0004115)
0.3 1.1 GO:0030348 syntaxin-3 binding(GO:0030348)
0.1 0.7 GO:0004128 cytochrome-b5 reductase activity, acting on NAD(P)H(GO:0004128)
0.0 0.5 GO:0019200 carbohydrate kinase activity(GO:0019200)
0.1 0.4 GO:0047179 platelet-activating factor acetyltransferase activity(GO:0047179)
0.1 0.4 GO:0004105 choline-phosphate cytidylyltransferase activity(GO:0004105)
0.1 0.4 GO:0003910 DNA ligase activity(GO:0003909) DNA ligase (ATP) activity(GO:0003910)
0.0 0.4 GO:0017151 DEAD/H-box RNA helicase binding(GO:0017151)
0.1 0.3 GO:0016941 natriuretic peptide receptor activity(GO:0016941)
0.0 0.3 GO:0001161 intronic transcription regulatory region sequence-specific DNA binding(GO:0001161)
0.0 0.3 GO:0008569 ATP-dependent microtubule motor activity, minus-end-directed(GO:0008569)
0.1 0.2 GO:0019966 interleukin-1 binding(GO:0019966)
0.0 0.1 GO:0004749 ribose phosphate diphosphokinase activity(GO:0004749)
0.0 0.1 GO:0036470 tyrosine 3-monooxygenase activator activity(GO:0036470) L-dopa decarboxylase activator activity(GO:0036478)

Gene overrepresentation in C2:CP category:

Showing 1 to 5 of 5 entries
Log-likelihood per target Total log-likelihoodTermDescription
0.0 1.6 SA_PTEN_PATHWAY PTEN is a tumor suppressor that dephosphorylates the lipid messenger phosphatidylinositol triphosphate.
0.0 1.1 SIG_CD40PATHWAYMAP Genes related to CD40 signaling
0.0 0.7 PID_LIS1_PATHWAY Lissencephaly gene (LIS1) in neuronal migration and development
0.0 0.4 PID_ALK2_PATHWAY ALK2 signaling events
0.0 0.4 SA_CASPASE_CASCADE Apoptosis is mediated by caspases, cysteine proteases arranged in a proteolytic cascade.

Gene overrepresentation in C2:CP:REACTOME category:

Showing 1 to 7 of 7 entries
Log-likelihood per target Total log-likelihoodTermDescription
0.1 1.1 REACTOME_ACETYLCHOLINE_NEUROTRANSMITTER_RELEASE_CYCLE Genes involved in Acetylcholine Neurotransmitter Release Cycle
0.0 0.7 REACTOME_ADHERENS_JUNCTIONS_INTERACTIONS Genes involved in Adherens junctions interactions
0.0 0.4 REACTOME_METABOLISM_OF_POLYAMINES Genes involved in Metabolism of polyamines
0.0 0.4 REACTOME_SYNTHESIS_OF_PC Genes involved in Synthesis of PC
0.0 0.4 REACTOME_DOWNREGULATION_OF_SMAD2_3_SMAD4_TRANSCRIPTIONAL_ACTIVITY Genes involved in Downregulation of SMAD2/3:SMAD4 transcriptional activity
0.0 0.4 REACTOME_SIGNALING_BY_BMP Genes involved in Signaling by BMP
0.0 0.4 REACTOME_PACKAGING_OF_TELOMERE_ENDS Genes involved in Packaging Of Telomere Ends