ISMARA results

All motifs sorted by activity significance

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Show 50100All entries

Showing 1 to 50 of 503 entries

Motif name	Z-value	Associated genes	Profile	Logo
Ybx1_Nfya_Nfyb_Nfyc_Cebpz	8.624	Ybx1 Nfya Nfyb Nfyc Cebpz
Hdx	7.518	Hdx
Nfatc1	6.529	Nfatc1
Irf2_Irf1_Irf8_Irf9_Irf7	4.245	Irf2 Irf1 Irf8 Irf9 Irf7
Chd1_Pml	4.114	Chd1 Pml
Wrnip1_Mta3_Rcor1	3.978	Wrnip1 Mta3 Rcor1
Taf1	3.780	Taf1
E2f2_E2f5	3.768	E2f2 E2f5
Sox2	3.633	Sox2
Nrf1	3.624	Nrf1
Hoxb7	3.443	Hoxb7
Rfx3_Rfx1_Rfx4	3.419	Rfx3 Rfx1 Rfx4
Yy1_Yy2	3.402	Yy1 Yy2
Zfx_Zfp711	3.150	Zfx Zfp711
Sp100	3.149	Sp100
Zfp110	3.137	Zfp110
Elf1_Elf2_Etv2_Elf4	3.010	Elf1 Elf2 Etv2 Elf4
Foxi1_Foxo1	2.992	Foxi1 Foxo1
Egr1	2.903	Egr1
Hcfc1_Six5_Smarcc2_Zfp143	2.873	Hcfc1 Six5 Smarcc2 Zfp143
Klf1	2.866	Klf1
Zbtb33_Chd2	2.827	Zbtb33 Chd2
Rest	2.772	Rest
Mecp2	2.742	Mecp2
Bptf	2.711	Bptf
Stat2	2.664	Stat2
Myf6	2.650	Myf6
E2f1	2.598	E2f1
E2f4	2.514	E2f4
Esr2	2.353	Esr2
Spib	2.326	Spib
Epas1_Bcl3	2.277	Epas1 Bcl3
Tbp	2.213	Tbp
Tcf4_Mesp1	2.181	Tcf4 Mesp1
Mybl2	2.116	Mybl2
Cpeb1	2.061	Cpeb1
Nfia	2.010	Nfia
Sox5_Sry	1.991	Sox5 Sry
Snai1_Zeb1_Snai2	1.973	Snai1 Zeb1 Snai2
Rela_Rel_Nfkb1	1.911	Rela Rel Nfkb1
Myb	1.885	Myb
Hic2	1.871	Hic2
Pparg_Rxrg	1.842	Pparg Rxrg
Max_Mycn	1.831	Max Mycn
Gata3	1.829	Gata3
Ppara	1.825	Ppara
Sp1	1.820	Sp1
Tcf7_Tcf7l2	1.817	Tcf7 Tcf7l2
Tfcp2	1.807	Tfcp2
Ahr	1.768	Ahr

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In order to use ARMADA for infering putative regulatory networks from timecourse data, please set for every sample a timepoint, gap from previous timepoint and replicate. If you have only one replicate per sample you can leave replicate field unset.