Motif ID: Tfeb_Usf1_Srebf1_Usf2_Bhlhe41_Srebf2
Z-value: 1.171






Transcription factors associated with Tfeb_Usf1_Srebf1_Usf2_Bhlhe41_Srebf2:
Gene Symbol | Entrez ID | Gene Name |
---|---|---|
Bhlhe41 | ENSMUSG00000030256.5 | Bhlhe41 |
Srebf1 | ENSMUSG00000020538.9 | Srebf1 |
Srebf2 | ENSMUSG00000022463.7 | Srebf2 |
Tfeb | ENSMUSG00000023990.12 | Tfeb |
Usf1 | ENSMUSG00000026641.7 | Usf1 |
Usf2 | ENSMUSG00000058239.7 | Usf2 |
Activity-expression correlation:
Gene Symbol | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Srebf1 | mm10_v2_chr11_-_60220550_60220632 | 0.49 | 6.6e-06 | Click! |
Srebf2 | mm10_v2_chr15_+_82147238_82147275 | -0.42 | 1.6e-04 | Click! |
Tfeb | mm10_v2_chr17_+_47785720_47785739 | 0.34 | 2.6e-03 | Click! |
Usf2 | mm10_v2_chr7_-_30956742_30956803 | -0.32 | 5.1e-03 | Click! |
Usf1 | mm10_v2_chr1_+_171411305_171411337 | -0.11 | 3.6e-01 | Click! |
First level regulatory network of Tfeb_Usf1_Srebf1_Usf2_Bhlhe41_Srebf2
View svg image
View png image
Top targets:
Showing 1 to 20 of 200 entries
Gene overrepresentation in biological_process category:
Showing 1 to 20 of 390 entries
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.6 | 36.0 | GO:0007157 | heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules(GO:0007157) |
0.4 | 35.9 | GO:0021510 | spinal cord development(GO:0021510) |
8.8 | 35.3 | GO:0070829 | heterochromatin maintenance(GO:0070829) |
0.5 | 28.5 | GO:0002011 | morphogenesis of an epithelial sheet(GO:0002011) |
6.6 | 26.3 | GO:0010288 | response to lead ion(GO:0010288) |
0.4 | 24.8 | GO:0070936 | protein K48-linked ubiquitination(GO:0070936) |
5.6 | 22.3 | GO:0016340 | calcium-dependent cell-matrix adhesion(GO:0016340) |
4.2 | 20.9 | GO:0014022 | neural plate elongation(GO:0014022) convergent extension involved in neural plate elongation(GO:0022007) |
0.8 | 19.1 | GO:1990126 | retrograde transport, endosome to plasma membrane(GO:1990126) |
5.6 | 16.9 | GO:1904170 | regulation of bleb assembly(GO:1904170) |
1.7 | 16.5 | GO:2000781 | positive regulation of double-strand break repair(GO:2000781) |
5.5 | 16.4 | GO:1904959 | elastin biosynthetic process(GO:0051542) copper ion export(GO:0060003) regulation of electron carrier activity(GO:1904732) regulation of cytochrome-c oxidase activity(GO:1904959) |
0.2 | 16.4 | GO:0043473 | pigmentation(GO:0043473) |
4.0 | 16.1 | GO:0060729 | intestinal epithelial structure maintenance(GO:0060729) |
5.1 | 15.2 | GO:0030421 | defecation(GO:0030421) |
0.7 | 15.1 | GO:0060009 | Sertoli cell development(GO:0060009) |
2.8 | 14.0 | GO:0090273 | regulation of somatostatin secretion(GO:0090273) |
0.2 | 13.3 | GO:0007492 | endoderm development(GO:0007492) |
4.4 | 13.1 | GO:0099547 | regulation of translation at synapse, modulating synaptic transmission(GO:0099547) regulation of translation at postsynapse, modulating synaptic transmission(GO:0099578) positive regulation of intracellular transport of viral material(GO:1901254) |
2.2 | 12.9 | GO:1903564 | regulation of protein localization to cilium(GO:1903564) |
Gene overrepresentation in cellular_component category:
Showing 1 to 20 of 172 entries
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
6.7 | 26.7 | GO:0031084 | BLOC-2 complex(GO:0031084) |
6.6 | 26.3 | GO:0097129 | cyclin D2-CDK4 complex(GO:0097129) |
0.0 | 25.6 | GO:0005887 | integral component of plasma membrane(GO:0005887) |
1.4 | 22.3 | GO:0043196 | varicosity(GO:0043196) |
0.4 | 22.2 | GO:0016235 | aggresome(GO:0016235) |
4.8 | 19.1 | GO:0030906 | retromer, cargo-selective complex(GO:0030906) |
1.5 | 18.2 | GO:0005641 | nuclear envelope lumen(GO:0005641) |
0.6 | 18.1 | GO:0030140 | trans-Golgi network transport vesicle(GO:0030140) |
3.4 | 16.9 | GO:0005826 | actomyosin contractile ring(GO:0005826) |
0.8 | 15.0 | GO:0005671 | Ada2/Gcn5/Ada3 transcription activator complex(GO:0005671) |
0.1 | 14.1 | GO:0017053 | transcriptional repressor complex(GO:0017053) |
4.7 | 14.0 | GO:0005899 | insulin receptor complex(GO:0005899) |
0.9 | 13.2 | GO:0048188 | Set1C/COMPASS complex(GO:0048188) |
3.3 | 13.1 | GO:1902737 | dendritic filopodium(GO:1902737) |
1.8 | 12.4 | GO:0033503 | HULC complex(GO:0033503) |
0.6 | 12.0 | GO:0010369 | chromocenter(GO:0010369) |
0.6 | 11.7 | GO:0097431 | mitotic spindle pole(GO:0097431) |
1.1 | 11.5 | GO:0071141 | SMAD protein complex(GO:0071141) |
0.1 | 10.5 | GO:0001669 | acrosomal vesicle(GO:0001669) |
0.1 | 10.5 | GO:0090575 | RNA polymerase II transcription factor complex(GO:0090575) |
Gene overrepresentation in molecular_function category:
Showing 1 to 20 of 264 entries
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 79.4 | GO:0005096 | GTPase activator activity(GO:0005096) |
0.2 | 73.0 | GO:0001077 | transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding(GO:0001077) |
11.8 | 35.3 | GO:0004489 | methylenetetrahydrofolate reductase (NAD(P)H) activity(GO:0004489) |
0.6 | 29.0 | GO:0030332 | cyclin binding(GO:0030332) |
0.5 | 21.8 | GO:0005109 | frizzled binding(GO:0005109) |
2.8 | 19.7 | GO:0033592 | RNA strand annealing activity(GO:0033592) |
0.3 | 19.1 | GO:0017022 | myosin binding(GO:0017022) |
0.3 | 16.7 | GO:0001105 | RNA polymerase II transcription coactivator activity(GO:0001105) |
5.5 | 16.4 | GO:0043682 | copper-exporting ATPase activity(GO:0004008) copper-transporting ATPase activity(GO:0043682) |
2.3 | 16.1 | GO:0031419 | cobalamin binding(GO:0031419) |
0.1 | 14.1 | GO:0061630 | ubiquitin protein ligase activity(GO:0061630) |
1.6 | 14.0 | GO:0005068 | transmembrane receptor protein tyrosine kinase adaptor activity(GO:0005068) |
0.1 | 13.7 | GO:0008565 | protein transporter activity(GO:0008565) |
0.1 | 13.3 | GO:0001228 | transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001228) |
0.1 | 12.9 | GO:0008083 | growth factor activity(GO:0008083) |
0.4 | 12.1 | GO:0070064 | proline-rich region binding(GO:0070064) |
0.6 | 11.7 | GO:0032454 | histone demethylase activity (H3-K9 specific)(GO:0032454) |
0.8 | 11.6 | GO:0003688 | DNA replication origin binding(GO:0003688) |
0.3 | 11.4 | GO:0017134 | fibroblast growth factor binding(GO:0017134) |
3.8 | 11.3 | GO:0035500 | MH2 domain binding(GO:0035500) |
Gene overrepresentation in C2:CP category:
Showing 1 to 20 of 49 entries
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
2.0 | 28.4 | SA_REG_CASCADE_OF_CYCLIN_EXPR | Expression of cyclins regulates progression through the cell cycle by activating cyclin-dependent kinases. |
0.8 | 22.7 | PID_BETA_CATENIN_DEG_PATHWAY | Degradation of beta catenin |
0.5 | 19.1 | PID_FOXM1_PATHWAY | FOXM1 transcription factor network |
0.5 | 12.4 | PID_S1P_S1P2_PATHWAY | S1P2 pathway |
0.4 | 11.8 | PID_SYNDECAN_4_PATHWAY | Syndecan-4-mediated signaling events |
0.2 | 11.8 | PID_PLK1_PATHWAY | PLK1 signaling events |
0.1 | 10.7 | PID_AR_PATHWAY | Coregulation of Androgen receptor activity |
0.1 | 9.7 | NABA_ECM_GLYCOPROTEINS | Genes encoding structural ECM glycoproteins |
0.2 | 9.0 | PID_IL2_PI3K_PATHWAY | IL2 signaling events mediated by PI3K |
0.2 | 8.8 | PID_IL2_1PATHWAY | IL2-mediated signaling events |
0.2 | 8.7 | PID_ECADHERIN_NASCENT_AJ_PATHWAY | E-cadherin signaling in the nascent adherens junction |
0.9 | 8.2 | SA_G2_AND_M_PHASES | Cdc25 activates the cdc2/cyclin B complex to induce the G2/M transition. |
0.2 | 8.1 | PID_PS1_PATHWAY | Presenilin action in Notch and Wnt signaling |
0.2 | 7.4 | PID_HNF3B_PATHWAY | FOXA2 and FOXA3 transcription factor networks |
0.2 | 6.1 | PID_ATM_PATHWAY | ATM pathway |
0.3 | 6.0 | PID_RANBP2_PATHWAY | Sumoylation by RanBP2 regulates transcriptional repression |
0.1 | 6.0 | PID_AR_TF_PATHWAY | Regulation of Androgen receptor activity |
0.6 | 4.6 | PID_HDAC_CLASSII_PATHWAY | Signaling events mediated by HDAC Class II |
0.2 | 4.6 | PID_ANGIOPOIETIN_RECEPTOR_PATHWAY | Angiopoietin receptor Tie2-mediated signaling |
0.1 | 4.2 | PID_ILK_PATHWAY | Integrin-linked kinase signaling |
Gene overrepresentation in C2:CP:REACTOME category:
Showing 1 to 20 of 79 entries
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 32.0 | REACTOME_SIGNALING_BY_RHO_GTPASES | Genes involved in Signaling by Rho GTPases |
0.5 | 31.9 | REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS | Genes involved in Metabolism of vitamins and cofactors |
0.6 | 29.8 | REACTOME_G1_PHASE | Genes involved in G1 Phase |
0.2 | 29.6 | REACTOME_MRNA_SPLICING | Genes involved in mRNA Splicing |
0.3 | 28.7 | REACTOME_TRANSPORT_OF_INORGANIC_CATIONS_ANIONS_AND_AMINO_ACIDS_OLIGOPEPTIDES | Genes involved in Transport of inorganic cations/anions and amino acids/oligopeptides |
0.4 | 26.5 | REACTOME_LOSS_OF_NLP_FROM_MITOTIC_CENTROSOMES | Genes involved in Loss of Nlp from mitotic centrosomes |
0.8 | 25.7 | REACTOME_SIGNALING_BY_HIPPO | Genes involved in Signaling by Hippo |
0.2 | 23.3 | REACTOME_MITOTIC_PROMETAPHASE | Genes involved in Mitotic Prometaphase |
0.6 | 16.1 | REACTOME_REGULATION_OF_GENE_EXPRESSION_IN_BETA_CELLS | Genes involved in Regulation of gene expression in beta cells |
0.4 | 15.6 | REACTOME_ION_TRANSPORT_BY_P_TYPE_ATPASES | Genes involved in Ion transport by P-type ATPases |
0.7 | 11.7 | REACTOME_SOS_MEDIATED_SIGNALLING | Genes involved in SOS-mediated signalling |
0.1 | 11.2 | REACTOME_ANTIGEN_PROCESSING_UBIQUITINATION_PROTEASOME_DEGRADATION | Genes involved in Antigen processing: Ubiquitination & Proteasome degradation |
0.7 | 10.9 | REACTOME_ACYL_CHAIN_REMODELLING_OF_PC | Genes involved in Acyl chain remodelling of PC |
0.8 | 8.1 | REACTOME_G2_M_DNA_DAMAGE_CHECKPOINT | Genes involved in G2/M DNA damage checkpoint |
0.7 | 8.1 | REACTOME_RECEPTOR_LIGAND_BINDING_INITIATES_THE_SECOND_PROTEOLYTIC_CLEAVAGE_OF_NOTCH_RECEPTOR | Genes involved in Receptor-ligand binding initiates the second proteolytic cleavage of Notch receptor |
0.3 | 7.8 | REACTOME_GROWTH_HORMONE_RECEPTOR_SIGNALING | Genes involved in Growth hormone receptor signaling |
0.4 | 7.6 | REACTOME_IONOTROPIC_ACTIVITY_OF_KAINATE_RECEPTORS | Genes involved in Ionotropic activity of Kainate Receptors |
0.2 | 7.1 | REACTOME_VOLTAGE_GATED_POTASSIUM_CHANNELS | Genes involved in Voltage gated Potassium channels |
0.4 | 7.0 | REACTOME_TRAF3_DEPENDENT_IRF_ACTIVATION_PATHWAY | Genes involved in TRAF3-dependent IRF activation pathway |
0.5 | 6.9 | REACTOME_NEF_MEDIATED_DOWNREGULATION_OF_MHC_CLASS_I_COMPLEX_CELL_SURFACE_EXPRESSION | Genes involved in Nef mediated downregulation of MHC class I complex cell surface expression |