ISMARA results: Zkscan3

Motif ID: Zkscan3

Z-value: 0.296

Transcription factors associated with Zkscan3:

Gene Symbol	Entrez ID	Gene Name
Zkscan3	ENSMUSG00000021327.12	Zkscan3

Activity-expression correlation:

Gene Symbol	Promoter	Pearson corr. coef.	P-value	Plot
Zkscan3	mm10_v2_chr13_-_21402688_21402755	-0.10	3.8e-01	Click!

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Showing 1 to 20 of 70 entries

Promoter	Score	Refseq	Gene Symbol	Gene Name
chr5_+_24985840	0.994	ENSMUST00000075081.6	1500035N22Rik	RIKEN cDNA 1500035N22 gene
chr11_-_75422586	0.732	ENSMUST00000138661.1 ENSMUST00000000769.7	Serpinf1	serine (or cysteine) peptidase inhibitor, clade F, member 1
chr13_-_100786402	0.685	ENSMUST00000174038.1 ENSMUST00000091295.7 ENSMUST00000072119.8	Ccnb1	cyclin B1
chr18_+_61105844	0.624	ENSMUST00000115268.3	Csf1r	colony stimulating factor 1 receptor
chr11_-_75422524	0.578	ENSMUST00000125982.1 ENSMUST00000137103.1	Serpinf1	serine (or cysteine) peptidase inhibitor, clade F, member 1
chr2_+_104095796	0.570	ENSMUST00000040423.5 ENSMUST00000168176.1	Cd59a	CD59a antigen
chr3_+_146500071	0.511	ENSMUST00000119130.1	Gng5	guanine nucleotide binding protein (G protein), gamma 5
chr6_-_122856151	0.490	ENSMUST00000042081.8	C3ar1	complement component 3a receptor 1
chr8_+_31091593	0.396	ENSMUST00000161713.1	Dusp26	dual specificity phosphatase 26 (putative)
chr13_-_19395728	0.393	ENSMUST00000039694.7	Stard3nl	STARD3 N-terminal like
chr3_+_146499850	0.373	ENSMUST00000118280.1	Gng5	guanine nucleotide binding protein (G protein), gamma 5
chr1_+_180942452	0.355	ENSMUST00000027800.8	Tmem63a	transmembrane protein 63a
chr2_-_66634952	0.350	ENSMUST00000100064.2 ENSMUST00000100063.2	Scn9a	sodium channel, voltage-gated, type IX, alpha
chr3_+_79629074	0.340	ENSMUST00000029388.8	4930579G24Rik	RIKEN cDNA 4930579G24 gene
chr11_-_102365111	0.325	ENSMUST00000006749.9	Slc4a1	solute carrier family 4 (anion exchanger), member 1
chr7_+_101896340	0.319	ENSMUST00000035395.7 ENSMUST00000106973.1 ENSMUST00000144207.1	Anapc15	anaphase prompoting complex C subunit 15
chr5_-_88675613	0.317	ENSMUST00000113234.1 ENSMUST00000153565.1	Grsf1	G-rich RNA sequence binding factor 1
chr13_-_32851176	0.314	ENSMUST00000091668.5 ENSMUST00000076352.6	Serpinb1a	serine (or cysteine) peptidase inhibitor, clade B, member 1a
chr8_+_70616816	0.314	ENSMUST00000052437.3	Lrrc25	leucine rich repeat containing 25
chr8_+_94810446	0.301	ENSMUST00000034232.1	Ccl17	chemokine (C-C motif) ligand 17

Gene Ontology Analysis

Gene overrepresentation in biological_process category:

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Showing 1 to 20 of 27 entries

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	1.3	GO:0060770	negative regulation of epithelial cell proliferation involved in prostate gland development(GO:0060770)
0.1	0.9	GO:0072513	positive regulation of secondary heart field cardioblast proliferation(GO:0072513)
0.2	0.7	GO:0031660	regulation of cyclin-dependent protein serine/threonine kinase activity involved in G2/M transition of mitotic cell cycle(GO:0031660) positive regulation of cyclin-dependent protein serine/threonine kinase activity involved in G2/M transition of mitotic cell cycle(GO:0031662)
0.2	0.6	GO:0038145	macrophage colony-stimulating factor signaling pathway(GO:0038145)
0.1	0.6	GO:0090272	negative regulation of fibroblast growth factor production(GO:0090272)
0.2	0.5	GO:0002430	complement receptor mediated signaling pathway(GO:0002430)
0.0	0.5	GO:1903504	regulation of mitotic cell cycle spindle assembly checkpoint(GO:0090266) regulation of mitotic spindle checkpoint(GO:1903504)
0.1	0.4	GO:1902310	positive regulation of peptidyl-serine dephosphorylation(GO:1902310)
0.0	0.4	GO:0048266	behavioral response to pain(GO:0048266)
0.1	0.3	GO:1904207	chemokine (C-C motif) ligand 2 secretion(GO:0035926) regulation of chemokine (C-C motif) ligand 2 secretion(GO:1904207) positive regulation of chemokine (C-C motif) ligand 2 secretion(GO:1904209)
0.1	0.3	GO:2000774	positive regulation of cellular senescence(GO:2000774)
0.0	0.3	GO:0006968	cellular defense response(GO:0006968)
0.0	0.3	GO:0015701	bicarbonate transport(GO:0015701)
0.0	0.3	GO:0000028	ribosomal small subunit assembly(GO:0000028)
0.0	0.2	GO:0045918	negative regulation of cytolysis(GO:0045918)
0.0	0.2	GO:1900262	regulation of DNA-directed DNA polymerase activity(GO:1900262) positive regulation of DNA-directed DNA polymerase activity(GO:1900264)
0.0	0.2	GO:0035726	common myeloid progenitor cell proliferation(GO:0035726)
0.0	0.2	GO:0051490	negative regulation of filopodium assembly(GO:0051490)
0.0	0.2	GO:0051639	actin filament network formation(GO:0051639)
0.0	0.2	GO:0070816	phosphorylation of RNA polymerase II C-terminal domain(GO:0070816)

Gene overrepresentation in cellular_component category:

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Showing 1 to 20 of 22 entries

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	1.3	GO:0043203	axon hillock(GO:0043203)
0.3	0.9	GO:0031680	G-protein beta/gamma-subunit complex(GO:0031680)
0.2	0.7	GO:0000942	condensed nuclear chromosome outer kinetochore(GO:0000942)
0.2	0.6	GO:1990682	CSF1-CSF1R complex(GO:1990682)
0.0	0.5	GO:0042645	nucleoid(GO:0009295) mitochondrial nucleoid(GO:0042645)
0.0	0.4	GO:0044232	organelle membrane contact site(GO:0044232)
0.0	0.4	GO:0001518	voltage-gated sodium channel complex(GO:0001518)
0.0	0.4	GO:0031307	integral component of mitochondrial outer membrane(GO:0031307)
0.0	0.3	GO:0033269	internode region of axon(GO:0033269)
0.0	0.3	GO:0017101	aminoacyl-tRNA synthetase multienzyme complex(GO:0017101)
0.0	0.3	GO:0005614	interstitial matrix(GO:0005614)
0.1	0.2	GO:0005673	transcription factor TFIIE complex(GO:0005673)
0.1	0.2	GO:0000438	core TFIIH complex portion of holo TFIIH complex(GO:0000438)
0.0	0.2	GO:0071203	WASH complex(GO:0071203)
0.0	0.2	GO:0031390	Ctf18 RFC-like complex(GO:0031390)
0.0	0.2	GO:0031362	anchored component of external side of plasma membrane(GO:0031362)
0.0	0.2	GO:0016471	vacuolar proton-transporting V-type ATPase complex(GO:0016471)
0.0	0.1	GO:0020018	ciliary pocket(GO:0020016) ciliary pocket membrane(GO:0020018)
0.0	0.1	GO:0033093	Weibel-Palade body(GO:0033093)
0.0	0.1	GO:0030690	Noc1p-Noc2p complex(GO:0030690)

Gene overrepresentation in molecular_function category:

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Showing 1 to 16 of 16 entries

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	1.6	GO:0004867	serine-type endopeptidase inhibitor activity(GO:0004867)
0.2	0.7	GO:0061575	cyclin-dependent protein serine/threonine kinase activator activity(GO:0061575)
0.0	0.7	GO:0001848	complement binding(GO:0001848)
0.2	0.5	GO:0004875	complement receptor activity(GO:0004875)
0.1	0.4	GO:0004647	phosphoserine phosphatase activity(GO:0004647)
0.0	0.4	GO:0031402	sodium ion binding(GO:0031402)
0.0	0.3	GO:0019911	structural constituent of myelin sheath(GO:0019911)
0.0	0.3	GO:0008510	sodium:bicarbonate symporter activity(GO:0008510)
0.0	0.3	GO:0048020	CCR chemokine receptor binding(GO:0048020)
0.0	0.2	GO:0003689	DNA clamp loader activity(GO:0003689) protein-DNA loading ATPase activity(GO:0033170)
0.0	0.2	GO:0008553	hydrogen-exporting ATPase activity, phosphorylative mechanism(GO:0008553)
0.0	0.2	GO:0008353	RNA polymerase II carboxy-terminal domain kinase activity(GO:0008353)
0.0	0.1	GO:0005534	galactose binding(GO:0005534)
0.0	0.1	GO:0035877	death effector domain binding(GO:0035877)
0.0	0.1	GO:0019865	immunoglobulin binding(GO:0019865)
0.0	0.1	GO:0001226	RNA polymerase II transcription corepressor binding(GO:0001226)

Gene overrepresentation in C2:CP category:

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Showing 1 to 3 of 3 entries

Total log-likelihood	Term	Description
1.5	NABA_ECM_REGULATORS	Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix
0.7	PID_FOXM1_PATHWAY	FOXM1 transcription factor network
0.6	PID_PTP1B_PATHWAY	Signaling events mediated by PTP1B

Gene overrepresentation in C2:CP:REACTOME category:

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Showing 1 to 8 of 8 entries

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.9	REACTOME_G_BETA_GAMMA_SIGNALLING_THROUGH_PLC_BETA	Genes involved in G beta:gamma signalling through PLC beta
0.1	0.7	REACTOME_G2_M_DNA_DAMAGE_CHECKPOINT	Genes involved in G2/M DNA damage checkpoint
0.0	0.3	REACTOME_CHEMOKINE_RECEPTORS_BIND_CHEMOKINES	Genes involved in Chemokine receptors bind chemokines
0.0	0.3	REACTOME_CYTOSOLIC_TRNA_AMINOACYLATION	Genes involved in Cytosolic tRNA aminoacylation
0.0	0.2	REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING	Genes involved in RNA Polymerase II Transcription Pre-Initiation And Promoter Opening
0.0	0.2	REACTOME_FORMATION_OF_INCISION_COMPLEX_IN_GG_NER	Genes involved in Formation of incision complex in GG-NER
0.0	0.1	REACTOME_INTRINSIC_PATHWAY	Genes involved in Intrinsic Pathway
0.0	0.1	REACTOME_MRNA_DECAY_BY_3_TO_5_EXORIBONUCLEASE	Genes involved in mRNA Decay by 3' to 5' Exoribonuclease