• All motifs sorted by activity significance
• All samples sorted alphabetically

• Activities table
• Activity deltas table
• Regulatory interactions
• Motifs sorted by significance (text)

Motif ID: HBP1_HMGB_SSRP1_UBTF.p2

Z-value: 2.035

---

Top targets:

Promoter	Score	Refseq	Gene	Description
chr1_-_140739020	52.269	NM_001025565 NM_001042577	Lhx9	LIM homeobox protein 9
chr7_-_56892061	46.218	NM_001005232	Dbx1	developing brain homeobox 1
chr3_+_133899454	25.676		Cxxc4	CXXC finger 4
chr1_-_42749940	24.058		2610017I09Rik	RIKEN cDNA 2610017I09 gene
chr13_+_95645581	21.064	NM_011021	Otp	orthopedia homolog (Drosophila)
chr6_-_12699189	19.769	NM_001164805	Thsd7a	thrombospondin, type I, domain containing 7A
chr6_+_15135505	17.567	NM_212435	Foxp2	forkhead box P2
chr4_-_6917628	12.757	NM_145711	Tox	thymocyte selection-associated high mobility group box
chr1_+_9591550	12.387		3110035E14Rik	RIKEN cDNA 3110035E14 gene
chr3_+_127336055	11.755	NM_009718	Neurog2	neurogenin 2
chr18_-_15309939	11.641	NM_134112	Kctd1	potassium channel tetramerisation domain containing 1
chr5_+_48374328	11.072	NM_178804	Slit2	slit homolog 2 (Drosophila)
chr13_-_56353523	10.788	NM_010896	Neurog1	neurogenin 1
chr10_+_17516024	10.592	NM_138628	Txlnb	taxilin beta
chr18_-_46372017	9.928	NM_178872	Trim36	tripartite motif-containing 36
chr2_-_59963586	9.465		Baz2b	bromodomain adjacent to zinc finger domain, 2B
chr2_-_65405546	9.398	NM_018732	Scn3a	sodium channel, voltage-gated, type III, alpha
chr1_-_176851949	8.747	NM_011825	Grem2	gremlin 2 homolog, cysteine knot superfamily (Xenopus laevis)
chr2_+_181498036	8.503	NM_001171615	Myt1	myelin transcription factor 1
chr2_-_56967331	8.107	NM_013613	Nr4a2	nuclear receptor subfamily 4, group A, member 2
chr11_+_93905557	7.887		Spag9	sperm associated antigen 9
chr1_-_12980994	7.881	NM_172841	Slco5a1	solute carrier organic anion transporter family, member 5A1
chr3_+_101814059	7.867	NM_178777	Nhlh2	nescient helix loop helix 2
chr13_-_60278723	7.864		Gas1	growth arrest specific 1
chr3_-_66100663	7.627	NM_145820	Veph1	ventricular zone expressed PH domain homolog 1 (zebrafish)
chr16_+_52031733	7.585		Cblb	Casitas B-lineage lymphoma b
chr9_-_82868992	7.513		Phip	pleckstrin homology domain interacting protein
chr17_+_17539832	7.463		Lix1	limb expression 1 homolog (chicken)
chr4_-_6917964	7.274		Tox	thymocyte selection-associated high mobility group box
chr8_+_46593141	7.250	NM_172752	Sorbs2	sorbin and SH3 domain containing 2
chr1_+_42752608	6.882
chr14_-_109313298	6.832		Slitrk1	SLIT and NTRK-like family, member 1
chr2_+_25036276	6.821	NM_025980	Nrarp	Notch-regulated ankyrin repeat protein
chr18_-_75120759	6.776	NM_010720	Lipg	lipase, endothelial
chr9_+_96159666	6.544	NM_001184710 NM_001184711	Tfdp2	transcription factor Dp 2
chrX_+_104115963	6.530	NM_175271	Lpar4	lysophosphatidic acid receptor 4
chrX_+_139952975	6.508	NM_001195048	Pak3	p21 protein (Cdc42/Rac)-activated kinase 3
chr16_+_52031704	6.388		Cblb	Casitas B-lineage lymphoma b
chr5_+_111846284	6.346		Mn1	meningioma 1
chr7_-_91827857	6.274	NM_022985	Zfand6	zinc finger, AN1-type domain 6
chr3_+_94282235	6.183		Celf3	VCUGBP, Elav-like family member 3
chr10_-_86956393	6.123	NM_008553	Ascl1	achaete-scute complex homolog 1 (Drosophila)
chr6_-_71582871	6.068	NM_001038695	Kdm3a	lysine (K)-specific demethylase 3A
chr4_+_13670582	5.908		Runx1t1	runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
chr7_+_106614513	5.888	NM_028145	Klhl35	kelch-like 35 (Drosophila)
chr12_+_104553168	5.881	NM_001195726	Fam181a	family with sequence similarity 181, member A
chr9_+_64988960	5.877	NM_008988	Igdcc3	immunoglobulin superfamily, DCC subclass, member 3
chr6_+_17699145	5.863	NM_001083315 NM_022332	St7	suppression of tumorigenicity 7
chr10_-_36855292	5.786		Marcks	myristoylated alanine rich protein kinase C substrate
chr14_-_34195326	5.758		Mapk8	mitogen-activated protein kinase 8
chr10_-_117252126	5.750
chr15_-_26825266	5.665	NM_176959	Fbxl7	F-box and leucine-rich repeat protein 7
chr5_+_28492235	5.662	NM_010134	En2	engrailed 2
chr5_-_135028197	5.658	NM_001039162 NM_009990	Clip2	CAP-GLY domain containing linker protein 2
chr5_-_67490295	5.554	NM_008888	Phox2b	paired-like homeobox 2b
chr1_+_19198994	5.552	NM_009334	Tcfap2b	transcription factor AP-2 beta
chr2_-_73613381	5.550	NM_001113246 NM_001166603	Chn1	chimerin (chimaerin) 1
chr16_-_17125198	5.505	NM_183287	2610318N02Rik	RIKEN cDNA 2610318N02 gene
chr19_-_46114019	5.494	NM_010697	Ldb1	LIM domain binding 1
chr4_+_48598013	5.426	NM_021436	Tmeff1	transmembrane protein with EGF-like and two follistatin-like domains 1
chr2_-_29701764	5.346		Gm3088	predicted gene 3088
chr10_+_57206184	5.330	NM_008297	Hsf2	heat shock factor 2
chr1_-_46910333	5.330	NM_172653	Slc39a10	solute carrier family 39 (zinc transporter), member 10
chr6_-_39156609	5.322		Jhdm1d	jumonji C domain-containing histone demethylase 1 homolog D (S. cerevisiae)
chr1_-_128634766	5.302		Nckap5	NCK-associated protein 5
chr12_+_30219982	5.301		Myt1l	myelin transcription factor 1-like
chr2_-_59963796	5.261	NM_001001182	Baz2b	bromodomain adjacent to zinc finger domain, 2B
chr3_+_34548916	5.254	NM_011443	Sox2	SRY-box containing gene 2
chr5_-_92512683	5.244	NM_001080795 NM_011816	G3bp2	GTPase activating protein (SH3 domain) binding protein 2
chr6_+_64992861	5.236		Smarcad1	SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
chr2_-_51004604	5.231	NM_028810	Rnd3	Rho family GTPase 3
chr3_+_5218545	5.228	NM_030708	Zfhx4	zinc finger homeodomain 4
chr16_-_44558929	5.221	NM_172506	Boc	biregional cell adhesion molecule-related/down-regulated by oncogenes (Cdon) binding protein
chr1_+_34062720	5.134		Dst	dystonin
chr4_-_21612991	5.128	NM_001080771	Prdm13	PR domain containing 13
chr6_+_64992810	5.111		Smarcad1	SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
chr4_-_109960078	5.108	NM_001038698	Elavl4	ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
chr8_-_64238879	5.004		Palld	palladin, cytoskeletal associated protein
chr15_+_98465193	4.962	NM_007581	Cacnb3	calcium channel, voltage-dependent, beta 3 subunit
chr14_-_104867215	4.938	NM_011143	Pou4f1	POU domain, class 4, transcription factor 1
chr18_-_43552694	4.924	NM_009468	Dpysl3	dihydropyrimidinase-like 3
chr11_-_40508405	4.903		Mat2b	methionine adenosyltransferase II, beta
chr7_+_87171113	4.889	NM_175433	Zfp710	zinc finger protein 710
chr10_+_43298969	4.787	NM_009846	Cd24a	CD24a antigen
chr9_+_61220162	4.776	NM_001083927 NM_001083928 NM_009389	Tle3	transducin-like enhancer of split 3, homolog of Drosophila E(spl)
chr10_+_79612410	4.756		Midn	midnolin
chr6_-_51416921	4.739		Hnrnpa2b1	heterogeneous nuclear ribonucleoprotein A2/B1
chr8_-_86760940	4.737	NM_172503	Zswim4	zinc finger, SWIM domain containing 4
chr4_+_122673318	4.733	NM_008506	Mycl1	v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)
chr16_-_96349292	4.685	NM_008251	Hmgn1	high mobility group nucleosomal binding domain 1
chr17_-_71199129	4.682	NM_001164076	Tgif1	TGFB-induced factor homeobox 1
chr13_-_54789064	4.680		Rnf44	ring finger protein 44
chr6_-_31513817	4.630	NM_013723	Podxl	podocalyxin-like
chr4_-_91042997	4.608	NM_001177883	Elavl2	ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)
chr1_+_155596555	4.597	NM_011882	Rnasel	ribonuclease L (2', 5'-oligoisoadenylate synthetase-dependent)
chr18_-_16966954	4.562		Cdh2	cadherin 2
chr9_+_55388955	4.529	NM_027397	Isl2	insulin related protein 2 (islet 2)
chr3_+_89019126	4.510		Thbs3	thrombospondin 3
chr2_+_61642509	4.494	NM_009322	Tbr1	T-box brain gene 1
chr18_+_35758269	4.446	NM_026420	Paip2	polyadenylate-binding protein-interacting protein 2
chr9_-_49606959	4.436		Ncam1	neural cell adhesion molecule 1
chr2_+_34631124	4.428		Hspa5	heat shock protein 5
chr8_+_63703064	4.405		Sh3rf1	SH3 domain containing ring finger 1
chr11_-_77707282	4.400	NM_008952	Pipox	pipecolic acid oxidase
chr10_+_68996455	4.383	NM_146005 NM_170688 NM_170689 NM_170690 NM_170728 NM_170729 NM_170730	Ank3	ankyrin 3, epithelial
chr18_+_65048630	4.286		Nedd4l	neural precursor cell expressed, developmentally down-regulated gene 4-like
chr12_+_53800369	4.175	NM_198111	Akap6	A kinase (PRKA) anchor protein 6
chr16_-_32079317	4.092	NM_177326	Pak2	p21 protein (Cdc42/Rac)-activated kinase 2
chr16_+_19760300	4.090	NM_001159407 NM_001159408 NM_054052	B3gnt5	UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
chr3_-_145312928	4.076	NM_010516	Cyr61	cysteine rich protein 61
chr10_-_61246611	4.064	NM_207000	H2afy2	H2A histone family, member Y2
chr7_-_134758707	4.030		Zfp629	zinc finger protein 629
chr6_+_64992584	3.982	NM_007958	Smarcad1	SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
chr9_-_110526866	3.945	NM_026012	Nradd	neurotrophin receptor associated death domain
chr4_-_3865501	3.880	NM_019969	Plag1	pleiomorphic adenoma gene 1
chr9_-_69608633	3.874	NM_022378	Foxb1	forkhead box B1
chr1_-_33871349	3.855		Zfp451	zinc finger protein 451
chr15_-_95358674	3.846		Nell2	NEL-like 2 (chicken)
chr5_-_138721164	3.833	NM_172412	Gpc2	glypican 2 (cerebroglycan)
chr7_+_134376574	3.754		Zfp553	zinc finger protein 553
chr17_-_28046158	3.695		Taf11	TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor
chr8_+_130882920	3.690	NM_008737	Nrp1	neuropilin 1
chr12_+_82049290	3.663		Srsf5	serine/arginine-rich splicing factor 5
chr4_+_111087610	3.652	NM_026279	Bend5	BEN domain containing 5
chr14_+_73637697	3.642	NM_175116	Lpar6	lysophosphatidic acid receptor 6
chr13_-_54788995	3.632		Rnf44	ring finger protein 44
chr19_+_40905768	3.553	NM_172839	Ccnj	cyclin J
chr16_+_17070249	3.537	NM_023249	Ypel1	yippee-like 1 (Drosophila)
chr5_+_90889913	3.507	NM_009654	Alb	albumin
chrX_+_93651684	3.489	NM_001159627 NM_181273	Heph	hephaestin
chr5_+_93696566	3.478	NM_007635	Ccng2	cyclin G2
chr4_-_20705698	3.435	NM_172987	Nkain3	Na+/K+ transporting ATPase interacting 3
chr13_+_88961161	3.385		Edil3	EGF-like repeats and discoidin I-like domains 3
chr11_+_20125239	3.370		Rab1	RAB1, member RAS oncogene family
chr1_+_174412343	3.369	NM_001145800 NM_033608	Igsf9	immunoglobulin superfamily, member 9
chr5_-_89104575	3.359	NM_001098476	Grsf1	G-rich RNA sequence binding factor 1
chr5_+_77694506	3.353	NM_011263	Rest	RE1-silencing transcription factor
chr2_+_78709363	3.318		Ube2e3	ubiquitin-conjugating enzyme E2E 3, UBC4/5 homolog (yeast)
chr6_-_49164469	3.318		Igf2bp3	insulin-like growth factor 2 mRNA binding protein 3
chrX_-_137077133	3.317		Tsc22d3	TSC22 domain family, member 3
chr4_-_131604821	3.312	NM_001128606	Epb4.1	erythrocyte protein band 4.1
chrX_-_6765768	3.311	NM_016691	Clcn5	chloride channel 5
chr18_+_73732352	3.285	NM_001039214	Mex3c	mex3 homolog C (C. elegans)
chr3_+_121129396	3.284	NM_028044	Cnn3	calponin 3, acidic
chr5_+_13399492	3.281		Sema3a	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
chr2_+_34631438	3.272		Hspa5	heat shock protein 5
chr3_-_83844042	3.260	NM_172681	D930015E06Rik	RIKEN cDNA D930015E06 gene
chr6_+_120314442	3.253		Kdm5a	lysine (K)-specific demethylase 5A
chr14_-_111154292	3.223	NM_175499	Slitrk6	SLIT and NTRK-like family, member 6
chr4_-_77857594	3.209		Ptprd	protein tyrosine phosphatase, receptor type, D
chr6_-_148893155	3.181		Fam60a	family with sequence similarity 60, member A
chr1_-_195196423	3.173	NM_144817	Camk1g	calcium/calmodulin-dependent protein kinase I gamma
chr4_-_91066674	3.168	NM_207685	Elavl2	ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)
chr5_+_73398142	3.161	NM_173403	Slc10a4	solute carrier family 10 (sodium/bile acid cotransporter family), member 4
chr4_+_129190877	3.154		Marcksl1	MARCKS-like 1
chr19_-_14672540	3.152		Tle4	transducin-like enhancer of split 4, homolog of Drosophila E(spl)
chr3_-_122322556	3.151	NM_001114665 NM_153118	Fnbp1l	formin binding protein 1-like
chr4_+_13670425	3.139	NM_001111026	Runx1t1	runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
chr15_-_76983985	3.118	NM_001110828 NM_001110829 NM_001110830	Rbfox2	RNA binding protein, fox-1 homolog (C. elegans) 2
chr3_-_49561168	3.108	NM_130448	Pcdh18	protocadherin 18
chr16_+_5086296	3.102
chr5_+_36236113	3.092		Afap1	actin filament associated protein 1
chr6_+_107479719	3.084	NM_008516	Lrrn1	leucine rich repeat protein 1, neuronal
chr12_-_32398730	3.067	NM_175191	Gpr22	G protein-coupled receptor 22
chr11_+_60513191	3.050	NM_001159404 NM_001159405 NM_008502	Llgl1	lethal giant larvae homolog 1 (Drosophila)
chr2_+_44966657	3.037	NM_001177394	Gm13476	predicted gene 13476
chrX_-_140261831	3.029		Capn6	calpain 6
chr2_+_14976877	3.021	NM_029466	Arl5b	ADP-ribosylation factor-like 5B
chr19_-_14672472	3.005	NM_011600	Tle4	transducin-like enhancer of split 4, homolog of Drosophila E(spl)
chr13_+_22036962	3.004	NM_183014	Zfp184	zinc finger protein 184 (Kruppel-like)
chr3_+_17695743	3.001		6430547I21Rik	RIKEN cDNA 6430547I21 gene
chr12_-_35213738	2.995	NM_024124	Hdac9	histone deacetylase 9
chr1_-_153347884	2.995	NM_011277	Rnf2	ring finger protein 2
chrX_-_9793824	2.974	NM_001177950 NM_001177951 NM_001177953 NM_001177954 NM_011285	Rpgr	retinitis pigmentosa GTPase regulator
chr9_-_50535949	2.947	NM_178118	Dixdc1	DIX domain containing 1
chrX_+_98624989	2.926	NM_023144	Nono	non-POU-domain-containing, octamer binding protein
chr2_-_74497475	2.922	NM_007967	Evx2	even skipped homeotic gene 2 homolog
chr4_-_133309484	2.921	NM_001080819	Arid1a	AT rich interactive domain 1A (SWI-like)
chr6_+_17015159	2.920		Tes	testis derived transcript
chr2_+_154262114	2.878	NM_009823 NM_172860	Cbfa2t2	core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)
chr6_-_3444484	2.867	NM_178899	Hepacam2	HEPACAM family member 2
chr8_-_8667108	2.853		Arglu1	arginine and glutamate rich 1
chr7_+_103358652	2.851		Odz4	odd Oz/ten-m homolog 4 (Drosophila)
chr12_-_86113948	2.850	NM_023409	Npc2	Niemann Pick type C2
chr13_-_40829082	2.839	NM_011547	Tcfap2a	transcription factor AP-2, alpha
chr11_+_93905443	2.835		Spag9	sperm associated antigen 9
chr17_+_17539908	2.834		Lix1	limb expression 1 homolog (chicken)
chr10_-_26095736	2.830		L3mbtl3	l(3)mbt-like 3 (Drosophila)
chr9_-_49606862	2.806		Ncam1	neural cell adhesion molecule 1
chr11_-_94154354	2.806		Luc7l3	LUC7-like 3 (S. cerevisiae)
chr17_+_78907402	2.798	NM_001197028 NM_028813	Vit	vitrin
chr14_-_52723590	2.797	NM_001170981 NM_001170982 NM_001170983 NM_001170984 NM_016884	Hnrnpc	heterogeneous nuclear ribonucleoprotein C
chr11_+_44430784	2.763
chr14_-_109313333	2.749		Slitrk1	SLIT and NTRK-like family, member 1
chrX_+_137909951	2.738	NM_001163155 NM_007736	Col4a5	collagen, type IV, alpha 5
chrX_+_35542969	2.716	NM_001079513 NM_020256	Zbtb33	zinc finger and BTB domain containing 33
chr7_-_29086780	2.707	NM_007866	Dll3	delta-like 3 (Drosophila)
chr3_+_37538808	2.707	NM_011896	Spry1	sprouty homolog 1 (Drosophila)
chr1_-_152840432	2.699	NM_001024720	Hmcn1	hemicentin 1
chr4_-_155571450	2.697		Agrn	agrin

Gene overrepresentation in process category:

enrichment	p-value	GO term	description
2.69	2.00e-37	GO:0010468	regulation of gene expression
2.82	8.44e-37	GO:0051252	regulation of RNA metabolic process
2.67	4.50e-34	GO:2000112	regulation of cellular macromolecule biosynthetic process
2.75	2.54e-33	GO:0006355	regulation of transcription, DNA-dependent
2.62	3.60e-33	GO:0010556	regulation of macromolecule biosynthetic process
2.33	7.72e-33	GO:0060255	regulation of macromolecule metabolic process
2.70	3.75e-32	GO:0016070	RNA metabolic process
2.53	6.71e-32	GO:0019219	regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
2.50	2.75e-31	GO:0051171	regulation of nitrogen compound metabolic process
2.50	5.55e-31	GO:0031326	regulation of cellular biosynthetic process
2.24	1.29e-30	GO:0031323	regulation of cellular metabolic process
2.47	3.00e-30	GO:0009889	regulation of biosynthetic process
2.23	1.34e-29	GO:0080090	regulation of primary metabolic process
2.45	1.21e-28	GO:0090304	nucleic acid metabolic process
2.46	3.35e-27	GO:0010467	gene expression
2.88	5.68e-27	GO:0006351	transcription, DNA-dependent
2.87	6.84e-27	GO:0032774	RNA biosynthetic process
2.07	7.25e-27	GO:0019222	regulation of metabolic process
2.20	5.89e-25	GO:0006139	nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
1.89	3.03e-23	GO:0044260	cellular macromolecule metabolic process
2.11	1.42e-21	GO:0032502	developmental process
2.18	1.99e-21	GO:0007275	multicellular organismal development
2.03	7.28e-21	GO:0034641	cellular nitrogen compound metabolic process
1.99	2.65e-20	GO:0006807	nitrogen compound metabolic process
3.07	2.85e-20	GO:0007399	nervous system development
2.28	3.08e-19	GO:0034645	cellular macromolecule biosynthetic process
1.75	5.44e-19	GO:0043170	macromolecule metabolic process
2.26	6.95e-19	GO:0009059	macromolecule biosynthetic process
2.16	1.74e-18	GO:0048856	anatomical structure development
2.17	3.86e-16	GO:0048731	system development
2.28	5.57e-15	GO:0030154	cell differentiation
2.21	5.64e-14	GO:0048869	cellular developmental process
1.55	8.08e-14	GO:0044237	cellular metabolic process
3.18	1.23e-13	GO:0048699	generation of neurons
1.53	1.70e-13	GO:0044238	primary metabolic process
3.02	8.78e-13	GO:0022008	neurogenesis
1.44	1.62e-12	GO:0050794	regulation of cellular process
1.87	2.00e-12	GO:0044249	cellular biosynthetic process
1.41	8.56e-12	GO:0050789	regulation of biological process
1.82	2.64e-11	GO:0009058	biosynthetic process
1.38	5.16e-11	GO:0065007	biological regulation
3.63	2.51e-10	GO:0007417	central nervous system development
2.33	3.74e-10	GO:0009653	anatomical structure morphogenesis
2.98	4.87e-10	GO:2000113	negative regulation of cellular macromolecule biosynthetic process
2.91	7.49e-10	GO:0010558	negative regulation of macromolecule biosynthetic process
1.84	7.82e-10	GO:0048518	positive regulation of biological process
2.87	8.85e-10	GO:0031327	negative regulation of cellular biosynthetic process
1.97	1.28e-09	GO:0048523	negative regulation of cellular process
3.07	2.01e-09	GO:0045892	negative regulation of transcription, DNA-dependent
1.41	2.11e-09	GO:0008152	metabolic process
2.80	2.37e-09	GO:0009890	negative regulation of biosynthetic process
2.93	2.71e-09	GO:0010629	negative regulation of gene expression
3.96	3.54e-09	GO:0016568	chromatin modification
3.02	3.58e-09	GO:0051253	negative regulation of RNA metabolic process
2.63	6.27e-09	GO:2000026	regulation of multicellular organismal development
3.67	8.65e-09	GO:0007389	pattern specification process
3.17	8.81e-09	GO:0030182	neuron differentiation
1.85	9.47e-09	GO:0048522	positive regulation of cellular process
3.83	9.61e-09	GO:0007420	brain development
3.64	1.11e-08	GO:0006325	chromatin organization
2.05	1.23e-08	GO:0048513	organ development
2.63	1.42e-08	GO:0048468	cell development
2.81	2.04e-08	GO:0051172	negative regulation of nitrogen compound metabolic process
1.23	2.59e-08	GO:0009987	cellular process
1.91	3.34e-08	GO:0071842	cellular component organization at cellular level
2.80	3.71e-08	GO:0045934	negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
3.14	5.95e-08	GO:0051276	chromosome organization
3.43	6.90e-08	GO:0060284	regulation of cell development
2.42	8.97e-08	GO:0031324	negative regulation of cellular metabolic process
2.38	9.73e-08	GO:0050793	regulation of developmental process
1.83	9.83e-08	GO:0048519	negative regulation of biological process
2.41	1.07e-07	GO:0010605	negative regulation of macromolecule metabolic process
4.08	1.20e-07	GO:0003002	regionalization
2.61	1.35e-07	GO:0045595	regulation of cell differentiation
1.85	1.66e-07	GO:0071841	cellular component organization or biogenesis at cellular level
2.40	1.72e-07	GO:0006357	regulation of transcription from RNA polymerase II promoter
3.58	4.25e-07	GO:0050767	regulation of neurogenesis
3.50	4.35e-07	GO:0016071	mRNA metabolic process
2.54	9.07e-07	GO:0051254	positive regulation of RNA metabolic process
2.26	1.07e-06	GO:0009892	negative regulation of metabolic process
3.30	1.14e-06	GO:0051093	negative regulation of developmental process
4.53	1.17e-06	GO:0009952	anterior/posterior pattern formation
2.53	1.53e-06	GO:0045893	positive regulation of transcription, DNA-dependent
3.56	1.70e-06	GO:0045596	negative regulation of cell differentiation
3.30	1.96e-06	GO:0051960	regulation of nervous system development
1.67	2.77e-06	GO:0016043	cellular component organization
2.72	3.40e-06	GO:0040011	locomotion
2.41	4.00e-06	GO:0010628	positive regulation of gene expression
2.35	4.52e-06	GO:0009888	tissue development
4.59	4.56e-06	GO:0016055	Wnt receptor signaling pathway
3.69	5.07e-06	GO:0008380	RNA splicing
4.04	5.67e-06	GO:0007409	axonogenesis
3.04	1.00e-05	GO:0048666	neuron development
2.25	1.12e-05	GO:0031328	positive regulation of cellular biosynthetic process
6.57	1.13e-05	GO:0030902	hindbrain development
1.63	1.19e-05	GO:0071840	cellular component organization or biogenesis
2.99	1.46e-05	GO:0000122	negative regulation of transcription from RNA polymerase II promoter
2.30	1.46e-05	GO:0010557	positive regulation of macromolecule biosynthetic process
3.51	1.58e-05	GO:0006397	mRNA processing
3.30	1.95e-05	GO:0031175	neuron projection development
3.37	2.15e-05	GO:0000904	cell morphogenesis involved in differentiation
2.21	2.27e-05	GO:0009891	positive regulation of biosynthetic process
2.29	2.31e-05	GO:0045935	positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
1.43	2.41e-05	GO:0032501	multicellular organismal process
3.53	2.49e-05	GO:0045664	regulation of neuron differentiation
3.68	3.73e-05	GO:0048667	cell morphogenesis involved in neuron differentiation
2.31	4.12e-05	GO:0009790	embryo development
2.23	5.34e-05	GO:0051173	positive regulation of nitrogen compound metabolic process
1.91	5.67e-05	GO:0051239	regulation of multicellular organismal process
1.98	6.62e-05	GO:0010604	positive regulation of macromolecule metabolic process
2.85	7.86e-05	GO:0048598	embryonic morphogenesis
3.52	9.14e-05	GO:0048812	neuron projection morphogenesis
1.95	1.36e-04	GO:0031325	positive regulation of cellular metabolic process
1.91	1.55e-04	GO:0009893	positive regulation of metabolic process
2.08	2.44e-04	GO:0010941	regulation of cell death
2.56	3.22e-04	GO:0051094	positive regulation of developmental process
2.89	3.69e-04	GO:0016477	cell migration
3.57	4.48e-04	GO:0030900	forebrain development
4.53	8.23e-04	GO:0007411	axon guidance
2.05	8.72e-04	GO:0042981	regulation of apoptosis
2.65	1.05e-03	GO:0006928	cellular component movement
2.02	1.26e-03	GO:0043067	regulation of programmed cell death
2.67	1.29e-03	GO:0048870	cell motility
2.67	1.29e-03	GO:0051674	localization of cell
2.68	1.87e-03	GO:0060429	epithelium development
2.37	2.04e-03	GO:0045944	positive regulation of transcription from RNA polymerase II promoter
3.06	2.20e-03	GO:0002009	morphogenesis of an epithelium
2.60	2.40e-03	GO:0000902	cell morphogenesis
6.74	2.98e-03	GO:0045665	negative regulation of neuron differentiation
3.56	3.02e-03	GO:0016570	histone modification
2.91	3.28e-03	GO:0048858	cell projection morphogenesis
3.69	3.38e-03	GO:0045165	cell fate commitment
3.27	3.48e-03	GO:0035239	tube morphogenesis
3.51	3.83e-03	GO:0016569	covalent chromatin modification
2.64	3.87e-03	GO:0045597	positive regulation of cell differentiation
5.33	3.90e-03	GO:0009953	dorsal/ventral pattern formation
2.86	4.68e-03	GO:0032990	cell part morphogenesis
2.42	5.00e-03	GO:0043009	chordate embryonic development
2.46	5.01e-03	GO:0032989	cellular component morphogenesis
1.77	5.01e-03	GO:0006996	organelle organization
2.38	5.15e-03	GO:0048646	anatomical structure formation involved in morphogenesis
28.05	5.42e-03	GO:0070934	CRD-mediated mRNA stabilization
4.42	5.59e-03	GO:0021915	neural tube development
2.39	6.81e-03	GO:0009792	embryo development ending in birth or egg hatching
3.37	7.06e-03	GO:0032582	negative regulation of gene-specific transcription
2.34	7.27e-03	GO:0006396	RNA processing
3.22	7.89e-03	GO:0048732	gland development
2.61	1.04e-02	GO:0048729	tissue morphogenesis
6.44	1.47e-02	GO:0021536	diencephalon development
2.51	1.50e-02	GO:0032583	regulation of gene-specific transcription
4.95	2.14e-02	GO:0001764	neuron migration
4.53	2.21e-02	GO:0007369	gastrulation
2.32	2.27e-02	GO:0030030	cell projection organization
1.65	2.58e-02	GO:0006464	protein modification process
3.63	2.95e-02	GO:0010769	regulation of cell morphogenesis involved in differentiation
3.63	2.95e-02	GO:0022604	regulation of cell morphogenesis
2.41	2.99e-02	GO:0040008	regulation of growth
2.62	3.10e-02	GO:0035295	tube development
10.02	3.34e-02	GO:0048640	negative regulation of developmental growth
1.61	4.12e-02	GO:0043412	macromolecule modification
4.21	4.65e-02	GO:0021953	central nervous system neuron differentiation
2.23	4.89e-02	GO:0010942	positive regulation of cell death

Gene overrepresentation in compartment category:

enrichment	p-value	GO term	description
2.04	7.73e-36	GO:0005634	nucleus
1.40	1.61e-22	GO:0005622	intracellular
1.41	5.38e-22	GO:0044424	intracellular part
1.45	5.22e-19	GO:0043229	intracellular organelle
1.44	9.32e-19	GO:0043226	organelle
1.48	8.25e-18	GO:0043231	intracellular membrane-bounded organelle
1.48	1.20e-17	GO:0043227	membrane-bounded organelle
2.40	6.42e-17	GO:0044428	nuclear part
2.33	3.95e-12	GO:0031981	nuclear lumen
3.02	4.39e-11	GO:0044451	nucleoplasm part
2.51	4.59e-10	GO:0005654	nucleoplasm
2.07	1.44e-09	GO:0031974	membrane-enclosed lumen
2.07	2.32e-09	GO:0070013	intracellular organelle lumen
2.06	2.58e-09	GO:0043233	organelle lumen
1.15	1.77e-07	GO:0005623	cell
1.15	1.77e-07	GO:0044464	cell part
1.47	1.39e-05	GO:0044446	intracellular organelle part
3.22	1.50e-05	GO:0005667	transcription factor complex
1.46	1.81e-05	GO:0044422	organelle part
1.49	2.39e-04	GO:0032991	macromolecular complex
1.52	7.18e-04	GO:0043234	protein complex
28.05	8.09e-04	GO:0070937	CRD-mediated mRNA stability complex
23.37	2.37e-03	GO:0016342	catenin complex
1.53	2.54e-03	GO:0043228	non-membrane-bounded organelle
1.53	2.54e-03	GO:0043232	intracellular non-membrane-bounded organelle
35.06	5.84e-03	GO:0071664	catenin-TCF7L2 complex
2.15	6.65e-03	GO:0043005	neuron projection
17.53	1.06e-02	GO:0005915	zonula adherens
2.49	1.07e-02	GO:0044297	cell body
1.64	1.49e-02	GO:0005856	cytoskeleton
15.58	1.86e-02	GO:0071564	npBAF complex
1.73	2.06e-02	GO:0042995	cell projection
3.98	2.51e-02	GO:0000790	nuclear chromatin
9.74	2.95e-02	GO:0070603	SWI/SNF-type complex
2.40	3.84e-02	GO:0043025	neuronal cell body
9.23	3.91e-02	GO:0031519	PcG protein complex
12.75	4.66e-02	GO:0071565	nBAF complex

Gene overrepresentation in function category:

enrichment	p-value	GO term	description
2.44	6.02e-28	GO:0003676	nucleic acid binding
1.44	9.29e-27	GO:0005488	binding
2.52	1.17e-19	GO:0003677	DNA binding
1.61	2.13e-15	GO:0005515	protein binding
2.92	4.87e-14	GO:0030528	transcription regulator activity
3.02	1.42e-12	GO:0001071	nucleic acid binding transcription factor activity
3.02	1.42e-12	GO:0003700	sequence-specific DNA binding transcription factor activity
2.76	5.05e-09	GO:0003723	RNA binding
2.15	1.88e-08	GO:0008270	zinc ion binding
2.77	2.50e-08	GO:0043565	sequence-specific DNA binding
3.59	1.43e-07	GO:0016564	transcription repressor activity
1.98	1.52e-07	GO:0046914	transition metal ion binding
3.63	1.18e-04	GO:0003682	chromatin binding
1.49	1.87e-04	GO:0046872	metal ion binding
1.47	3.61e-04	GO:0043169	cation binding
1.46	4.43e-04	GO:0043167	ion binding
2.39	6.24e-04	GO:0019904	protein domain specific binding
28.05	9.91e-04	GO:0042153	RPTP-like protein binding
1.59	1.21e-03	GO:0000166	nucleotide binding
1.92	7.43e-03	GO:0019899	enzyme binding
5.08	7.59e-03	GO:0003704	specific RNA polymerase II transcription factor activity
2.55	8.90e-03	GO:0016563	transcription activator activity
2.80	1.14e-02	GO:0019901	protein kinase binding
2.82	1.55e-02	GO:0003712	transcription cofactor activity
2.81	1.64e-02	GO:0000989	transcription factor binding transcription factor activity
2.78	1.94e-02	GO:0000988	protein binding transcription factor activity
14.02	3.71e-02	GO:0045295	gamma-catenin binding
2.46	4.73e-02	GO:0019900	kinase binding