Motif ID: REST.p3

Z-value: 4.504

Transcription factors associated with REST.p3:

NameEntrezDescription
Rest 19712 RE1-silencing transcription factor

Activity-expression correlation:

GenePromoterPearsonP-valuePlot
Restchr5_+_77694506-0.733.7e-07Click!


Activity profile for motif REST.p3.

activity profile for motif REST.p3


Sorted Z-values histogram for motif REST.p3

Sorted Z-values for motif REST.p3



Network of associatons between targets according to the STRING database.



First level regulatory network of REST.p3

PNG image of the network

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Top targets:


Promoter Score Refseq Gene Description
chr6_+_113232319 105.171 Cpne9
copine family member IX
chr4_+_15808409 98.935 NM_009788
Calb1
calbindin 1
chr16_-_23890909 69.865 NM_009215
Sst
somatostatin
chr2_-_25174498 65.817 Grin1
glutamate receptor, ionotropic, NMDA1 (zeta 1)
chr2_-_25174662 60.277 NM_001177656
NM_001177657
NM_008169
Grin1


glutamate receptor, ionotropic, NMDA1 (zeta 1)


chr4_-_128798481 54.038 NM_010471
Hpca
hippocalcin
chrX_+_7215705 51.376 NM_009305
Syp
synaptophysin
chr3_-_80606500 49.212 Gria2
glutamate receptor, ionotropic, AMPA2 (alpha 2)
chr5_+_137506122 47.913 NM_001039385
Vgf
VGF nerve growth factor inducible
chr11_+_77744280 43.555 NM_021286
Sez6
seizure related gene 6
chr2_+_155601077 43.093 NM_010808
Mmp24
matrix metallopeptidase 24
chrX_-_20498021 41.811 NM_001110780
NM_013680
Syn1

synapsin I

chr1_-_84692750 39.431 NM_152915
Dner
delta/notch-like EGF-related receptor
chr1_-_84692352 37.187 Dner
delta/notch-like EGF-related receptor
chr7_+_28438881 36.475 NM_028417
Ttc9b
tetratricopeptide repeat domain 9B
chr2_+_132607013 36.413 NM_007694
Chgb
chromogranin B
chr3_-_80606598 34.878 Gria2
glutamate receptor, ionotropic, AMPA2 (alpha 2)
chr3_-_80606641 33.972 Gria2
glutamate receptor, ionotropic, AMPA2 (alpha 2)
chr1_+_81073778 32.971 NM_172849
9430031J16Rik
RIKEN cDNA 9430031J16 gene
chr16_-_37384915 32.831 Stxbp5l
syntaxin binding protein 5-like
chr18_-_31606908 31.712 NM_009308
Syt4
synaptotagmin IV
chr17_-_91492065 30.513 NM_020252
NM_177284
Nrxn1

neurexin I

chr11_+_80290509 29.976 NM_009871
Cdk5r1
cyclin-dependent kinase 5, regulatory subunit 1 (p35)
chr12_+_103793130 29.919 NM_007693
Chga
chromogranin A
chr9_+_40076800 28.631 NM_001083917
NM_153522
NM_178227
Scn3b


sodium channel, voltage-gated, type III, beta


chr2_-_181048957 28.368 Stmn3
stathmin-like 3
chr16_-_37385024 26.684 NM_001114611
NM_001114612
NM_001114613
NM_172440
Stxbp5l



syntaxin binding protein 5-like



chr9_-_57315800 26.275 NM_020270
Scamp5
secretory carrier membrane protein 5
chr13_+_54472705 25.955 NM_009946
Cplx2
complexin 2
chr6_-_121423633 25.743 Iqsec3
IQ motif and Sec7 domain 3
chr3_-_80606704 25.382 NM_001039195
NM_001083806
NM_013540
Gria2


glutamate receptor, ionotropic, AMPA2 (alpha 2)


chr5_-_121459496 23.985 NM_011286
Rph3a
rabphilin 3A
chr2_+_164793796 23.701 Slc12a5
solute carrier family 12, member 5
chr2_+_164793698 23.533 Slc12a5
solute carrier family 12, member 5
chr11_-_35612058 23.272 Fbll1
fibrillarin-like 1
chr2_-_92241357 21.517 NM_011162
Mapk8ip1
mitogen-activated protein kinase 8 interacting protein 1
chr11_+_80290571 20.854 Cdk5r1
cyclin-dependent kinase 5, regulatory subunit 1 (p35)
chr1_-_177422630 17.210 NM_001199003
NM_011880
Rgs7

regulator of G protein signaling 7

chr6_-_121423682 15.479 NM_001033354
Iqsec3
IQ motif and Sec7 domain 3
chr7_-_88638789 14.303 NM_021492
Ap3b2
adaptor-related protein complex 3, beta 2 subunit
chr17_-_25377052 14.081 NM_172529
Gnptg
N-acetylglucosamine-1-phosphotransferase, gamma subunit
chr2_-_92241282 13.316 Mapk8ip1
mitogen-activated protein kinase 8 interacting protein 1
chr15_-_76552594 12.898 NM_198119
Lrrc24
leucine rich repeat containing 24
chr1_+_34636537 12.404 NM_213727
Fam123c
family with sequence similarity 123, member C
chr10_-_3557441 11.850 NM_001039652
Oprm1
opioid receptor, mu 1
chr12_-_113749363 11.764 NM_178915
Tmem179
transmembrane protein 179
chr12_-_71448300 11.747 Trim9
tripartite motif-containing 9
chr12_+_117724239 11.604 Ptprn2
protein tyrosine phosphatase, receptor type, N polypeptide 2
chr2_+_22478062 11.565 Gad2
glutamic acid decarboxylase 2
chr7_-_88638540 11.230 Ap3b2
adaptor-related protein complex 3, beta 2 subunit
chr1_+_161453899 10.807 NM_022312
Tnr
tenascin R
chr3_+_114606995 10.306 NM_153458
Olfm3
olfactomedin 3
chr6_+_113232300 9.817 NM_170673
Cpne9
copine family member IX
chr12_-_113749313 9.144 Tmem179
transmembrane protein 179
chr12_-_86039703 9.018 NM_001033334
Tmem90a
transmembrane protein 90a
chr2_+_132607432 8.985 Chgb
chromogranin B
chr2_-_79294977 8.554 Neurod1
neurogenic differentiation 1
chr9_+_122026378 8.231 NM_001164572
NM_133741
Snrk

SNF related kinase

chr13_-_105844882 7.447 NM_029879
Rgs7bp
regulator of G-protein signalling 7 binding protein
chr4_+_128814102 7.406 NM_027402
Fndc5
fibronectin type III domain containing 5
chr13_-_54850954 7.006 NM_012014
Gprin1
G protein-regulated inducer of neurite outgrowth 1
chr6_+_117118552 6.982 NM_001012477
NM_013655
NM_021704
Cxcl12


chemokine (C-X-C motif) ligand 12


chr17_+_70318387 6.950 Dlgap1
discs, large (Drosophila) homolog-associated protein 1
chr12_+_117724182 6.902 NM_011215
Ptprn2
protein tyrosine phosphatase, receptor type, N polypeptide 2
chr14_+_66587319 6.882 NM_013492
Clu
clusterin
chr1_-_75176703 6.777 NM_023732
Abcb6
ATP-binding cassette, sub-family B (MDR/TAP), member 6
chr19_+_22213516 6.759 NM_001035239
NM_001035240
NM_001035241
NM_001035242
NM_001035243
Trpm3




transient receptor potential cation channel, subfamily M, member 3




chr11_+_74433092 6.661 NM_001013784
E130309D14Rik
RIKEN cDNA E130309D14 gene
chr10_+_90292388 6.463 Anks1b
ankyrin repeat and sterile alpha motif domain containing 1B
chr17_+_70318707 5.979 Dlgap1
discs, large (Drosophila) homolog-associated protein 1
chr7_-_88638744 5.627 Ap3b2
adaptor-related protein complex 3, beta 2 subunit
chr2_+_139996381 5.567 NM_027093
2310003L22Rik
RIKEN cDNA 2310003L22 gene
chr5_-_121459315 4.907 Rph3a
rabphilin 3A
chr11_+_102254699 4.409 NM_016759
Rundc3a
RUN domain containing 3A
chr14_-_50145396 4.295 NM_029238
Slc35f4
solute carrier family 35, member F4
chr8_+_18846262 4.278 NM_026792
Agpat5
1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)
chr12_+_121184294 3.980 NM_001160385
Tmem196
transmembrane protein 196
chr17_+_70318530 3.851 Dlgap1
discs, large (Drosophila) homolog-associated protein 1
chr17_-_71339826 3.776 NM_023402
Myl12b
myosin, light chain 12B, regulatory
chr19_+_5038825 3.639 NM_175383
B3gnt1
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1
chr10_+_90292453 3.417 Anks1b
ankyrin repeat and sterile alpha motif domain containing 1B
chr2_+_22478131 2.829 Gad2
glutamic acid decarboxylase 2
chr16_-_17576750 2.821 NM_144852
Slc7a4
solute carrier family 7 (cationic amino acid transporter, y+ system), member 4
chr6_+_8898613 2.652 Nxph1
neurexophilin 1
chr17_-_23877115 2.565 NM_023824
Paqr4
progestin and adipoQ receptor family member IV
chr7_-_20189709 2.500 NM_016680
Clasrp
CLK4-associating serine/arginine rich protein
chr11_-_117734712 2.475 NM_027919
Tha1
threonine aldolase 1
chr9_-_21889841 2.461 Ecsit
ECSIT homolog (Drosophila)
chr12_+_117724251 2.398 Ptprn2
protein tyrosine phosphatase, receptor type, N polypeptide 2
chr19_+_47253484 2.378 Neurl1a
neuralized homolog 1A (Drosophila)
chr8_+_18846471 2.321 Agpat5
1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)
chr17_+_70318760 2.127 Dlgap1
discs, large (Drosophila) homolog-associated protein 1
chr13_+_45602938 2.103


chr4_-_135050358 1.891 NM_028995
Nipal3
NIPA-like domain containing 3
chr2_-_26997965 1.878 NM_175427
Fam163b
family with sequence similarity 163, member B
chr9_+_40609317 1.779 NM_031165
Hspa8
heat shock protein 8
chr9_-_21889810 1.732 NM_012029
Ecsit
ECSIT homolog (Drosophila)
chr9_+_108728650 1.491 NM_080437
Celsr3
cadherin, EGF LAG seven-pass G-type receptor 3 (flamingo homolog, Drosophila)
chr19_+_42330170 1.475 NM_027694
Golga7b
golgi autoantigen, golgin subfamily a, 7B
chr3_-_89568552 1.408 NM_009602
Chrnb2
cholinergic receptor, nicotinic, beta polypeptide 2 (neuronal)
chr11_+_76485971 1.303 NM_177182
Bhlha9
basic helix-loop-helix family, member a9
chr3_-_89568525 1.289 Chrnb2
cholinergic receptor, nicotinic, beta polypeptide 2 (neuronal)
chr2_+_32502186 1.160 Eng
endoglin
chr4_+_12833983 1.055 NM_001171801
NM_173746
Gm11818

predicted gene 11818

chr19_+_47253626 1.050 Neurl1a
neuralized homolog 1A (Drosophila)
chr2_+_132607398 1.032 Chgb
chromogranin B
chr8_+_18846524 0.949 Agpat5
1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)
chr10_-_126558207 0.853 NM_001171026
NM_177614
Os9

amplified in osteosarcoma

chr18_-_33373324 0.772 Stard4
StAR-related lipid transfer (START) domain containing 4
chr17_+_24686778 0.709 NM_013630
Pkd1
polycystic kidney disease 1 homolog
chr5_+_117570113 0.693 Taok3
TAO kinase 3
chr4_-_4065205 0.652 Penk
preproenkephalin
chr1_-_177422520 0.639 Rgs7
regulator of G protein signaling 7
chr1_-_164478475 0.501 NM_144877
Mettl13
methyltransferase like 13
chr5_-_122915995 0.398 Atp2a2
ATPase, Ca++ transporting, cardiac muscle, slow twitch 2
chr2_+_139996419 0.290 2310003L22Rik
RIKEN cDNA 2310003L22 gene
chr9_-_113562893 0.285 Pdcd6ip
programmed cell death 6 interacting protein
chr11_-_115465172 0.242 NM_173048
Gga3
golgi associated, gamma adaptin ear containing, ARF binding protein 3
chr11_-_74710462 0.147 Sgsm2
small G protein signaling modulator 2
chr3_-_89568298 0.142 Chrnb2
cholinergic receptor, nicotinic, beta polypeptide 2 (neuronal)
chr1_-_177555593 0.044 NM_010209
Fh1
fumarate hydratase 1

Gene Ontology Analysis

Gene overrepresentation in process category:

enrichment p-value GO term description
13.91 2.92e-09 GO:0007268 synaptic transmission
10.38 3.97e-09 GO:0007267 cell-cell signaling
11.01 5.41e-08 GO:0019226 transmission of nerve impulse
11.01 5.41e-08 GO:0035637 multicellular organismal signaling
10.62 4.50e-07 GO:0046903 secretion
6.69 1.74e-06 GO:0007154 cell communication
20.25 2.19e-06 GO:0003001 generation of a signal involved in cell-cell signaling
20.25 2.19e-06 GO:0023061 signal release
12.21 3.27e-06 GO:0032940 secretion by cell
25.41 4.27e-06 GO:0001505 regulation of neurotransmitter levels
37.61 4.58e-06 GO:0007269 neurotransmitter secretion
2.67 7.09e-05 GO:0051179 localization
18.19 3.79e-04 GO:0006836 neurotransmitter transport
2.66 1.42e-03 GO:0006810 transport
2.62 1.91e-03 GO:0051234 establishment of localization
4.47 2.09e-03 GO:0051649 establishment of localization in cell
11.83 4.65e-03 GO:0007626 locomotory behavior
275.73 5.36e-03 GO:0007158 neuron cell-cell adhesion
26.27 6.46e-03 GO:0048489 synaptic vesicle transport
8.59 6.74e-03 GO:0031644 regulation of neurological system process
4.27 7.90e-03 GO:0022008 neurogenesis
2.96 8.18e-03 GO:0065008 regulation of biological quality
3.74 1.37e-02 GO:0051641 cellular localization
3.50 1.39e-02 GO:0007399 nervous system development
4.78 1.66e-02 GO:0016192 vesicle-mediated transport
4.18 2.23e-02 GO:0048699 generation of neurons
3.57 2.25e-02 GO:0010646 regulation of cell communication
8.63 2.75e-02 GO:0050804 regulation of synaptic transmission
11.70 2.77e-02 GO:0006887 exocytosis
35.98 3.14e-02 GO:0016079 synaptic vesicle exocytosis
35.98 3.14e-02 GO:0017158 regulation of calcium ion-dependent exocytosis
137.87 3.20e-02 GO:0001661 conditioned taste aversion
5.47 4.09e-02 GO:0048666 neuron development
8.01 4.17e-02 GO:0051969 regulation of transmission of nerve impulse
31.83 4.57e-02 GO:0050807 regulation of synapse organization

Gene overrepresentation in compartment category:

enrichment p-value GO term description
9.84 8.52e-11 GO:0045202 synapse
7.96 1.05e-08 GO:0043005 neuron projection
10.78 1.89e-08 GO:0044456 synapse part
22.29 2.73e-07 GO:0008021 synaptic vesicle
17.01 2.89e-07 GO:0030136 clathrin-coated vesicle
4.99 3.74e-07 GO:0042995 cell projection
14.96 8.93e-07 GO:0030135 coated vesicle
7.15 2.66e-06 GO:0016023 cytoplasmic membrane-bounded vesicle
6.78 5.03e-06 GO:0031988 membrane-bounded vesicle
5.58 1.58e-05 GO:0031410 cytoplasmic vesicle
1.78 1.65e-05 GO:0016020 membrane
5.89 2.55e-05 GO:0030054 cell junction
5.25 3.34e-05 GO:0031982 vesicle
8.17 3.84e-05 GO:0044297 cell body
8.72 9.06e-05 GO:0030425 dendrite
25.54 1.61e-04 GO:0030665 clathrin coated vesicle membrane
7.72 2.48e-04 GO:0043025 neuronal cell body
38.04 3.82e-04 GO:0030672 synaptic vesicle membrane
19.71 5.88e-04 GO:0030662 coated vesicle membrane
17.03 1.21e-03 GO:0030426 growth cone
2.24 1.28e-03 GO:0005886 plasma membrane
16.43 1.44e-03 GO:0030427 site of polarized growth
1.76 1.62e-03 GO:0044425 membrane part
2.19 1.91e-03 GO:0071944 cell periphery
10.55 2.40e-03 GO:0030659 cytoplasmic vesicle membrane
10.23 2.86e-03 GO:0044433 cytoplasmic vesicle part
9.58 4.14e-03 GO:0012506 vesicle membrane
7.44 4.57e-03 GO:0030424 axon
3.40 5.05e-03 GO:0000267 cell fraction
2.73 1.13e-02 GO:0044459 plasma membrane part
5.39 1.22e-02 GO:0044463 cell projection part
3.57 2.41e-02 GO:0005624 membrane fraction
8.58 3.20e-02 GO:0045211 postsynaptic membrane
3.41 3.57e-02 GO:0005626 insoluble fraction
68.94 3.98e-02 GO:0061200 clathrin sculpted gamma-aminobutyric acid transport vesicle
68.94 3.98e-02 GO:0061202 clathrin sculpted gamma-aminobutyric acid transport vesicle membrane

Gene overrepresentation in function category:

enrichment p-value GO term description
6.06 1.44e-04 GO:0005509 calcium ion binding