• All motifs sorted by activity significance
• All samples sorted alphabetically

• Activities table
• Activity deltas table
• Regulatory interactions
• Motifs sorted by significance (text)

Motif ID: SOX2.p2

Z-value: 3.098

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Top targets:

Promoter	Score	Refseq	Gene	Description
chr7_-_56892061	43.525	NM_001005232	Dbx1	developing brain homeobox 1
chr1_-_42749940	35.230		2610017I09Rik	RIKEN cDNA 2610017I09 gene
chr8_+_46593141	30.431	NM_172752	Sorbs2	sorbin and SH3 domain containing 2
chr1_-_140739020	22.433	NM_001025565 NM_001042577	Lhx9	LIM homeobox protein 9
chr10_+_17516024	21.462	NM_138628	Txlnb	taxilin beta
chr2_-_65405546	21.046	NM_018732	Scn3a	sodium channel, voltage-gated, type III, alpha
chr10_+_43298969	20.984	NM_009846	Cd24a	CD24a antigen
chr6_-_12699189	20.610	NM_001164805	Thsd7a	thrombospondin, type I, domain containing 7A
chr18_-_46372017	19.849	NM_178872	Trim36	tripartite motif-containing 36
chr1_-_12980994	19.743	NM_172841	Slco5a1	solute carrier organic anion transporter family, member 5A1
chr12_+_30219982	19.268		Myt1l	myelin transcription factor 1-like
chrX_-_149078963	17.236		Shroom2	shroom family member 2
chr10_+_119256444	16.614	NM_028736 NM_130891	Grip1	glutamate receptor interacting protein 1
chr5_+_48374328	15.339	NM_178804	Slit2	slit homolog 2 (Drosophila)
chr18_-_43552694	15.076	NM_009468	Dpysl3	dihydropyrimidinase-like 3
chr2_+_181498036	14.389	NM_001171615	Myt1	myelin transcription factor 1
chrX_+_106290703	14.141	NM_019989	Sh3bgrl	SH3-binding domain glutamic acid-rich protein like
chr11_+_93905557	13.868		Spag9	sperm associated antigen 9
chr7_-_91827857	13.825	NM_022985	Zfand6	zinc finger, AN1-type domain 6
chr4_+_109015660	13.713	NM_001159964	Eps15	epidermal growth factor receptor pathway substrate 15
chr12_+_30213224	13.331	NM_001093775 NM_001093778 NM_008666	Myt1l	myelin transcription factor 1-like
chr2_-_59963586	13.071		Baz2b	bromodomain adjacent to zinc finger domain, 2B
chr5_-_135028197	12.853	NM_001039162 NM_009990	Clip2	CAP-GLY domain containing linker protein 2
chr10_+_101621491	12.428	NM_001162368	Mgat4c 4930402I19Rik	mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative) RIKEN cDNA 4930402I19 gene
chrX_+_139952975	12.303	NM_001195048	Pak3	p21 protein (Cdc42/Rac)-activated kinase 3
chr12_-_36769054	11.206	NM_025359	Tspan13	tetraspanin 13
chr4_+_129190877	11.145		Marcksl1	MARCKS-like 1
chr4_-_109960078	10.804	NM_001038698	Elavl4	ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
chr4_+_129190872	10.602		Marcksl1	MARCKS-like 1
chr8_+_63703064	10.541		Sh3rf1	SH3 domain containing ring finger 1
chr4_+_48598013	10.353	NM_021436	Tmeff1	transmembrane protein with EGF-like and two follistatin-like domains 1
chr3_-_107734481	10.058	NM_026672	Gstm7	glutathione S-transferase, mu 7
chr3_-_66100663	9.919	NM_145820	Veph1	ventricular zone expressed PH domain homolog 1 (zebrafish)
chr6_-_138371302	9.858		Lmo3	LIM domain only 3
chr10_+_28863801	9.767	NM_026138	6330407J23Rik	RIKEN cDNA 6330407J23 gene
chrX_+_130829929	9.662		Tmem35	transmembrane protein 35
chr2_+_157385835	9.601	NM_010923 NM_180960	Nnat	neuronatin
chr5_+_143722032	9.577	NM_007984	Fscn1	fascin homolog 1, actin bundling protein (Strongylocentrotus purpuratus)
chr3_-_122322556	9.519	NM_001114665 NM_153118	Fnbp1l	formin binding protein 1-like
chr19_-_19185685	9.424	NM_001043354	Rorb	RAR-related orphan receptor beta
chr2_+_61642509	9.351	NM_009322	Tbr1	T-box brain gene 1
chr8_-_86760940	9.333	NM_172503	Zswim4	zinc finger, SWIM domain containing 4
chr13_-_56353523	9.183	NM_010896	Neurog1	neurogenin 1
chr14_-_20796411	8.881	NM_001038637 NM_010315	Gng2	guanine nucleotide binding protein (G protein), gamma 2
chr2_-_73613381	8.737	NM_001113246 NM_001166603	Chn1	chimerin (chimaerin) 1
chr4_+_13670582	8.664		Runx1t1	runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
chr16_-_17125198	8.606	NM_183287	2610318N02Rik	RIKEN cDNA 2610318N02 gene
chr18_+_59222034	8.572	NM_001167925 NM_173759	A730017C20Rik	RIKEN cDNA A730017C20 gene
chr14_-_20796199	8.551		Gng2	guanine nucleotide binding protein (G protein), gamma 2
chr10_+_68996455	8.479	NM_146005 NM_170688 NM_170689 NM_170690 NM_170728 NM_170729 NM_170730	Ank3	ankyrin 3, epithelial
chr17_-_35975148	8.360	NM_011655	Tubb5	tubulin, beta 5
chr5_+_89012547	8.319		Rufy3	RUN and FYVE domain containing 3
chrX_-_140367467	8.228	NM_001110222 NM_001110223 NM_001110224 NM_010025	Dcx	doublecortin
chr12_-_32398730	8.219	NM_175191	Gpr22	G protein-coupled receptor 22
chr1_-_195196423	8.192	NM_144817	Camk1g	calcium/calmodulin-dependent protein kinase I gamma
chr3_+_127336055	8.191	NM_009718	Neurog2	neurogenin 2
chr3_+_53959956	8.165	NM_016984	Trpc4	transient receptor potential cation channel, subfamily C, member 4
chr17_+_17539832	8.069		Lix1	limb expression 1 homolog (chicken)
chr3_+_94282235	8.061		Celf3	VCUGBP, Elav-like family member 3
chr19_-_46114019	8.060	NM_010697	Ldb1	LIM domain binding 1
chr5_-_92512683	8.043	NM_001080795 NM_011816	G3bp2	GTPase activating protein (SH3 domain) binding protein 2
chr10_+_79612410	8.000		Midn	midnolin
chr10_+_57206184	7.965	NM_008297	Hsf2	heat shock factor 2
chr2_+_37372112	7.912	NM_177383	Gpr21	G protein-coupled receptor 21
chr4_-_20705698	7.850	NM_172987	Nkain3	Na+/K+ transporting ATPase interacting 3
chr1_+_19198994	7.789	NM_009334	Tcfap2b	transcription factor AP-2 beta
chr16_-_44558929	7.768	NM_172506	Boc	biregional cell adhesion molecule-related/down-regulated by oncogenes (Cdon) binding protein
chr18_-_75120759	7.759	NM_010720	Lipg	lipase, endothelial
chr18_-_16966954	7.706		Cdh2	cadherin 2
chr14_-_109313298	7.674		Slitrk1	SLIT and NTRK-like family, member 1
chr19_+_4756524	7.660	NM_025717	Rbm4b	RNA binding motif protein 4B
chr2_-_56967331	7.631	NM_013613	Nr4a2	nuclear receptor subfamily 4, group A, member 2
chr5_+_67067477	7.539		Uchl1	ubiquitin carboxy-terminal hydrolase L1
chr11_+_93905443	7.477		Spag9	sperm associated antigen 9
chr4_-_91042997	7.443	NM_001177883	Elavl2	ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)
chr6_+_17015159	7.292		Tes	testis derived transcript
chr3_+_101814059	7.221	NM_178777	Nhlh2	nescient helix loop helix 2
chr3_-_143865162	7.168	NM_001161770 NM_001161769	Lmo4	LIM domain only 4
chr13_-_54789064	7.161		Rnf44	ring finger protein 44
chr3_-_83844042	7.123	NM_172681	D930015E06Rik	RIKEN cDNA D930015E06 gene
chr5_+_13399492	7.074		Sema3a	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
chr4_-_77857594	7.054		Ptprd	protein tyrosine phosphatase, receptor type, D
chr4_-_6917628	6.919	NM_145711	Tox	thymocyte selection-associated high mobility group box
chr10_-_26095736	6.771		L3mbtl3	l(3)mbt-like 3 (Drosophila)
chr12_+_53800369	6.734	NM_198111	Akap6	A kinase (PRKA) anchor protein 6
chr2_-_59963796	6.628	NM_001001182	Baz2b	bromodomain adjacent to zinc finger domain, 2B
chr15_-_26825266	6.622	NM_176959	Fbxl7	F-box and leucine-rich repeat protein 7
chr12_+_3365147	6.620		Kif3c	kinesin family member 3C
chr12_+_96930429	6.609	NM_201518	Flrt2	fibronectin leucine rich transmembrane protein 2
chr8_+_63702967	6.596	NM_021506	Sh3rf1	SH3 domain containing ring finger 1
chr7_-_111001598	6.589	NM_008221	Hbb-y	hemoglobin Y, beta-like embryonic chain
chr9_+_96159666	6.561	NM_001184710 NM_001184711	Tfdp2	transcription factor Dp 2
chr2_-_165710128	6.516	NM_027230	Zmynd8	zinc finger, MYND-type containing 8
chr6_+_64992584	6.469	NM_007958	Smarcad1	SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
chr9_+_96159123	6.433	NM_001184709	Tfdp2	transcription factor Dp 2
chr7_+_69493148	6.431	NM_010882	Ndn	necdin
chr15_+_98465193	6.426	NM_007581	Cacnb3	calcium channel, voltage-dependent, beta 3 subunit
chr3_+_89019126	6.386		Thbs3	thrombospondin 3
chr9_+_74823917	6.386	NM_153584	BC031353	cDNA sequence BC031353
chr8_-_42140113	6.314	NM_001005864	Mtus1	mitochondrial tumor suppressor 1
chr1_+_9591550	6.302		3110035E14Rik	RIKEN cDNA 3110035E14 gene
chr12_+_30219769	6.282	NM_001093776	Myt1l	myelin transcription factor 1-like
chr1_+_155596555	6.267	NM_011882	Rnasel	ribonuclease L (2', 5'-oligoisoadenylate synthetase-dependent)
chr5_-_92566671	6.244
chr9_-_71743854	6.239		Tcf12	transcription factor 12
chr4_-_77857753	6.206		Ptprd	protein tyrosine phosphatase, receptor type, D
chr4_+_13670425	6.178	NM_001111026	Runx1t1	runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
chr1_+_62749850	6.139	NM_001077403 NM_001077404 NM_001077405 NM_001077406 NM_001077407 NM_010939	Nrp2	neuropilin 2
chr11_-_95867076	6.106	NM_009951	Igf2bp1	insulin-like growth factor 2 mRNA binding protein 1
chr11_+_93905501	6.102	NM_001025428 NM_001025429 NM_001025430	Spag9	sperm associated antigen 9
chr2_-_51004604	6.102	NM_028810	Rnd3	Rho family GTPase 3
chr4_+_111087610	6.029	NM_026279	Bend5	BEN domain containing 5
chr7_-_112936063	6.015	NM_001162943	Dchs1	dachsous 1 (Drosophila)
chr16_+_17070249	6.005	NM_023249	Ypel1	yippee-like 1 (Drosophila)
chr18_+_65048630	5.996		Nedd4l	neural precursor cell expressed, developmentally down-regulated gene 4-like
chr2_+_14976877	5.973	NM_029466	Arl5b	ADP-ribosylation factor-like 5B
chr5_+_89012600	5.919		Rufy3	RUN and FYVE domain containing 3
chr4_-_155571450	5.868		Agrn	agrin
chr7_-_134758707	5.846		Zfp629	zinc finger protein 629
chr5_+_19413335	5.826	NM_001170745 NM_015823	Magi2	membrane associated guanylate kinase, WW and PDZ domain containing 2
chr18_-_33623527	5.814		D0H4S114	DNA segment, human D4S114
chrX_-_103124651	5.773	NM_009530	Atrx	alpha thalassemia/mental retardation syndrome X-linked homolog (human)
chrX_+_104115963	5.768	NM_175271	Lpar4	lysophosphatidic acid receptor 4
chr5_+_111846284	5.734		Mn1	meningioma 1
chr9_-_117161564	5.714	NM_001172122 NM_001172123 NM_001172124 NM_001172126 NM_178660	Rbms3	RNA binding motif, single stranded interacting protein
chr1_-_135817945	5.702	NM_054077	Prelp	proline arginine-rich end leucine-rich repeat
chr5_+_36236113	5.701		Afap1	actin filament associated protein 1
chr7_+_134376574	5.654		Zfp553	zinc finger protein 553
chr12_-_14158843	5.644	NM_029007	Fam84a	family with sequence similarity 84, member A
chr13_-_55589377	5.633	NM_001177371 NM_001177372 NM_019813	Dbn1	drebrin 1
chr6_-_31513817	5.549	NM_013723	Podxl	podocalyxin-like
chr9_-_49606959	5.544		Ncam1	neural cell adhesion molecule 1
chr1_+_59969845	5.543	NM_001037725	Fam117b	family with sequence similarity 117, member B
chr15_-_76983985	5.529	NM_001110828 NM_001110829 NM_001110830	Rbfox2	RNA binding protein, fox-1 homolog (C. elegans) 2
chr9_+_55388955	5.512	NM_027397	Isl2	insulin related protein 2 (islet 2)
chr15_-_98783909	5.511	NM_011653	Tuba1a	tubulin, alpha 1A
chr16_+_19760300	5.460	NM_001159407 NM_001159408 NM_054052	B3gnt5	UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
chr6_+_17015148	5.432	NM_207176	Tes	testis derived transcript
chr5_+_28492235	5.417	NM_010134	En2	engrailed 2
chr10_-_25798768	5.374	NM_029881	Tmem200a	transmembrane protein 200A
chr10_-_61246611	5.344	NM_207000	H2afy2	H2A histone family, member Y2
chr1_-_33871349	5.339		Zfp451	zinc finger protein 451
chr13_+_88961161	5.326		Edil3	EGF-like repeats and discoidin I-like domains 3
chr6_+_64992810	5.301		Smarcad1	SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
chr3_-_84024766	5.296	NM_030706	Trim2	tripartite motif-containing 2
chr7_+_90015842	5.215	NM_175366	Mex3b	mex3 homolog B (C. elegans)
chr3_+_5218545	5.163	NM_030708	Zfhx4	zinc finger homeodomain 4
chr16_+_93608058	5.157	NM_007620	Cbr1	carbonyl reductase 1
chrX_+_140098931	5.157
chr5_+_67067497	5.150		Uchl1	ubiquitin carboxy-terminal hydrolase L1
chrY_-_582062	5.079	NM_009484	Uty	ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome
chr7_-_91558468	5.072	NM_007488	Arnt2	aryl hydrocarbon receptor nuclear translocator 2
chr5_-_103640272	5.042	NM_001081567 NM_009158	Mapk10	mitogen-activated protein kinase 10
chr2_+_65683823	4.925	NM_153409 NM_178634	Csrnp3	cysteine-serine-rich nuclear protein 3
chr8_-_64238879	4.916		Palld	palladin, cytoskeletal associated protein
chr19_-_47036782	4.877	NM_029810	Nt5c2	5'-nucleotidase, cytosolic II
chr10_+_27794664	4.865		Ptprk	protein tyrosine phosphatase, receptor type, K
chr1_-_97564064	4.860		St8sia4	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4
chr12_-_15822792	4.847		Trib2	tribbles homolog 2 (Drosophila)
chr5_-_115750940	4.833		Dynll1	dynein light chain LC8-type 1
chr10_-_93498449	4.831		Vezt	vezatin, adherens junctions transmembrane protein
chr3_-_95032039	4.826		Mllt11	myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11
chr16_+_78301923	4.806	NM_001025192 NM_009988	Cxadr	coxsackie virus and adenovirus receptor
chr1_+_139795165	4.763		A630083H20Rik	RIKEN cDNA A630083H20 gene
chr13_-_111070344	4.738		Rab3c	RAB3C, member RAS oncogene family
chr5_+_31014229	4.736	NM_023047	Dpysl5	dihydropyrimidinase-like 5
chr8_-_87461251	4.727	NM_019945	Mast1	microtubule associated serine/threonine kinase 1
chr3_+_121129396	4.711	NM_028044	Cnn3	calponin 3, acidic
chr7_+_103358652	4.688		Odz4	odd Oz/ten-m homolog 4 (Drosophila)
chr3_+_7503409	4.671	NM_173181	Fam164a	family with sequence similarity 164, member A
chr10_+_17443024	4.627	NM_010828	Cited2	Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
chr7_+_106614513	4.602	NM_028145	Klhl35	kelch-like 35 (Drosophila)
chr1_-_128634766	4.572		Nckap5	NCK-associated protein 5
chr14_-_20796255	4.571		Gng2	guanine nucleotide binding protein (G protein), gamma 2
chr15_-_95358674	4.568		Nell2	NEL-like 2 (chicken)
chr10_-_93498482	4.529		Vezt	vezatin, adherens junctions transmembrane protein
chr6_+_64992861	4.513		Smarcad1	SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
chr10_-_93498488	4.512	NM_172538	Vezt	vezatin, adherens junctions transmembrane protein
chrX_+_35542969	4.509	NM_001079513 NM_020256	Zbtb33	zinc finger and BTB domain containing 33
chr9_-_49607017	4.479		Ncam1	neural cell adhesion molecule 1
chr11_+_117193732	4.468
chr5_+_89012537	4.449		Rufy3	RUN and FYVE domain containing 3
chr18_-_15309939	4.417	NM_134112	Kctd1	potassium channel tetramerisation domain containing 1
chr4_+_11083585	4.358	NM_021897	Trp53inp1	transformation related protein 53 inducible nuclear protein 1
chr4_+_122673318	4.314	NM_008506	Mycl1	v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)
chr5_+_37637027	4.304	NM_007765	Crmp1	collapsin response mediator protein 1
chr3_+_8509479	4.280	NM_025285	Stmn2	stathmin-like 2
chr13_-_111070225	4.277		Rab3c	RAB3C, member RAS oncogene family
chr6_+_71657791	4.275	NM_178608	Reep1	receptor accessory protein 1
chr6_+_15135505	4.273	NM_212435	Foxp2	forkhead box P2
chr1_-_167865030	4.212	NM_198933 NM_198934	Pou2f1	POU domain, class 2, transcription factor 1
chr1_-_135817867	4.199
chrX_-_131285919	4.199	NM_001007578	Armcx6	armadillo repeat containing, X-linked 6
chr11_-_107655777	4.168	NM_019431	Cacng4	calcium channel, voltage-dependent, gamma subunit 4
chr5_+_73398142	4.166	NM_173403	Slc10a4	solute carrier family 10 (sodium/bile acid cotransporter family), member 4
chr17_-_35975075	4.161		Tubb5	tubulin, beta 5
chr11_+_23978110	4.152		Bcl11a	B-cell CLL/lymphoma 11A (zinc finger protein)
chr9_+_61220162	4.136	NM_001083927 NM_001083928 NM_009389	Tle3	transducin-like enhancer of split 3, homolog of Drosophila E(spl)
chr13_-_40829082	4.125	NM_011547	Tcfap2a	transcription factor AP-2, alpha
chr5_+_34326081	4.123	NM_001033458	Gm1673	predicted gene 1673

Gene overrepresentation in process category:

enrichment	p-value	GO term	description
3.02	1.04e-22	GO:0007399	nervous system development
3.47	3.09e-20	GO:0048699	generation of neurons
2.13	3.25e-20	GO:0010468	regulation of gene expression
3.37	3.42e-20	GO:0022008	neurogenesis
2.21	5.76e-20	GO:0051252	regulation of RNA metabolic process
2.14	4.24e-19	GO:2000112	regulation of cellular macromolecule biosynthetic process
2.19	1.08e-18	GO:0006355	regulation of transcription, DNA-dependent
2.10	2.27e-18	GO:0010556	regulation of macromolecule biosynthetic process
3.77	1.46e-16	GO:0030182	neuron differentiation
2.01	1.57e-16	GO:0019219	regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
2.00	1.87e-16	GO:0051171	regulation of nitrogen compound metabolic process
1.85	6.06e-16	GO:0060255	regulation of macromolecule metabolic process
1.98	7.48e-16	GO:0031326	regulation of cellular biosynthetic process
4.58	1.50e-15	GO:0031175	neuron projection development
1.92	2.02e-15	GO:0007275	multicellular organismal development
4.07	2.26e-15	GO:0048666	neuron development
1.96	2.67e-15	GO:0009889	regulation of biosynthetic process
1.83	3.86e-14	GO:0032502	developmental process
5.33	3.88e-14	GO:0007409	axonogenesis
1.77	6.01e-14	GO:0031323	regulation of cellular metabolic process
2.00	6.23e-14	GO:0048731	system development
4.98	1.55e-13	GO:0048667	cell morphogenesis involved in neuron differentiation
2.20	2.17e-13	GO:0006351	transcription, DNA-dependent
1.91	2.47e-13	GO:0048856	anatomical structure development
2.19	2.49e-13	GO:0032774	RNA biosynthetic process
2.11	2.96e-13	GO:0030154	cell differentiation
1.75	6.09e-13	GO:0080090	regulation of primary metabolic process
2.06	1.25e-12	GO:0048869	cellular developmental process
2.81	1.30e-12	GO:0048468	cell development
3.51	1.52e-12	GO:0030030	cell projection organization
1.67	2.46e-12	GO:0019222	regulation of metabolic process
4.64	4.30e-12	GO:0048812	neuron projection morphogenesis
4.14	1.86e-11	GO:0048858	cell projection morphogenesis
4.13	2.09e-11	GO:0000904	cell morphogenesis involved in differentiation
1.98	2.69e-11	GO:0071842	cellular component organization at cellular level
1.91	3.28e-11	GO:0016070	RNA metabolic process
4.06	3.69e-11	GO:0032990	cell part morphogenesis
1.89	5.73e-10	GO:0071841	cellular component organization or biogenesis at cellular level
3.34	1.35e-09	GO:0000902	cell morphogenesis
2.18	1.60e-09	GO:0009653	anatomical structure morphogenesis
1.76	4.50e-09	GO:0090304	nucleic acid metabolic process
1.67	7.89e-09	GO:0006139	nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
2.84	1.35e-08	GO:0040011	locomotion
3.07	2.62e-08	GO:0032989	cellular component morphogenesis
1.70	3.07e-08	GO:0016043	cellular component organization
1.75	3.39e-08	GO:0010467	gene expression
1.49	7.33e-08	GO:0044260	cellular macromolecule metabolic process
3.08	1.12e-07	GO:0007417	central nervous system development
3.75	1.22e-07	GO:0045664	regulation of neuron differentiation
3.29	1.27e-07	GO:0051960	regulation of nervous system development
5.40	1.69e-07	GO:0007411	axon guidance
1.75	1.88e-07	GO:0034645	cellular macromolecule biosynthetic process
1.73	3.26e-07	GO:0009059	macromolecule biosynthetic process
1.64	4.17e-07	GO:0071840	cellular component organization or biogenesis
3.32	5.25e-07	GO:0007420	brain development
2.32	8.62e-07	GO:2000026	regulation of multicellular organismal development
2.19	1.05e-06	GO:0050793	regulation of developmental process
3.30	1.11e-06	GO:0050767	regulation of neurogenesis
3.05	1.15e-06	GO:0060284	regulation of cell development
2.39	1.31e-06	GO:0045595	regulation of cell differentiation
1.55	1.81e-06	GO:0034641	cellular nitrogen compound metabolic process
1.29	2.01e-06	GO:0050789	regulation of biological process
1.28	2.37e-06	GO:0065007	biological regulation
1.53	2.38e-06	GO:0006807	nitrogen compound metabolic process
2.87	4.12e-06	GO:0006928	cellular component movement
1.30	4.63e-06	GO:0050794	regulation of cellular process
3.01	7.58e-06	GO:0016477	cell migration
2.15	8.49e-06	GO:0006357	regulation of transcription from RNA polymerase II promoter
1.58	4.15e-05	GO:0048518	positive regulation of biological process
1.38	4.35e-05	GO:0043170	macromolecule metabolic process
2.77	4.39e-05	GO:0048870	cell motility
2.77	4.39e-05	GO:0051674	localization of cell
2.14	5.82e-05	GO:0010557	positive regulation of macromolecule biosynthetic process
2.23	7.24e-05	GO:0045893	positive regulation of transcription, DNA-dependent
3.94	7.41e-05	GO:0010975	regulation of neuron projection development
1.67	7.42e-05	GO:0048523	negative regulation of cellular process
3.52	8.63e-05	GO:0030900	forebrain development
2.20	1.18e-04	GO:0051254	positive regulation of RNA metabolic process
2.06	1.36e-04	GO:0031328	positive regulation of cellular biosynthetic process
2.78	1.43e-04	GO:0051093	negative regulation of developmental process
2.99	1.68e-04	GO:0045596	negative regulation of cell differentiation
2.13	2.05e-04	GO:0010628	positive regulation of gene expression
2.02	2.71e-04	GO:0009891	positive regulation of biosynthetic process
3.53	2.76e-04	GO:0031344	regulation of cell projection organization
1.58	3.07e-04	GO:0048522	positive regulation of cellular process
2.34	5.83e-04	GO:0045944	positive regulation of transcription from RNA polymerase II promoter
1.30	7.75e-04	GO:0044237	cellular metabolic process
2.17	9.89e-04	GO:2000113	negative regulation of cellular macromolecule biosynthetic process
2.02	1.04e-03	GO:0045935	positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
1.48	1.23e-03	GO:0044249	cellular biosynthetic process
2.24	1.25e-03	GO:0045892	negative regulation of transcription, DNA-dependent
2.13	1.30e-03	GO:0010558	negative regulation of macromolecule biosynthetic process
2.10	1.42e-03	GO:0031327	negative regulation of cellular biosynthetic process
2.77	1.42e-03	GO:0016568	chromatin modification
2.21	1.87e-03	GO:0051253	negative regulation of RNA metabolic process
2.98	2.07e-03	GO:0006935	chemotaxis
2.98	2.07e-03	GO:0042330	taxis
1.97	2.26e-03	GO:0051173	positive regulation of nitrogen compound metabolic process
1.55	2.45e-03	GO:0048519	negative regulation of biological process
2.05	2.78e-03	GO:0009890	negative regulation of biosynthetic process
1.65	2.83e-03	GO:0048513	organ development
1.97	2.98e-03	GO:0009888	tissue development
19.01	3.32e-03	GO:0006208	pyrimidine base catabolic process
2.12	3.39e-03	GO:0010629	negative regulation of gene expression
1.45	3.95e-03	GO:0009058	biosynthetic process
1.72	4.35e-03	GO:0006996	organelle organization
2.07	5.96e-03	GO:0051172	negative regulation of nitrogen compound metabolic process
1.75	6.47e-03	GO:0010604	positive regulation of macromolecule metabolic process
1.27	6.98e-03	GO:0044238	primary metabolic process
1.87	7.22e-03	GO:0031324	negative regulation of cellular metabolic process
16.89	7.27e-03	GO:0046113	nucleobase catabolic process
4.60	7.57e-03	GO:0050770	regulation of axonogenesis
2.49	7.78e-03	GO:0006325	chromatin organization
1.70	8.57e-03	GO:0009893	positive regulation of metabolic process
2.06	9.21e-03	GO:0045934	negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
2.12	9.52e-03	GO:0007155	cell adhesion
2.37	1.05e-02	GO:0000122	negative regulation of transcription from RNA polymerase II promoter
2.10	1.17e-02	GO:0022610	biological adhesion
4.68	1.46e-02	GO:0001764	neuron migration
1.14	1.71e-02	GO:0009987	cellular process
4.56	1.91e-02	GO:0030902	hindbrain development
1.69	2.29e-02	GO:0031325	positive regulation of cellular metabolic process
2.16	2.31e-02	GO:0051094	positive regulation of developmental process
2.32	2.37e-02	GO:0040008	regulation of growth
1.80	3.34e-02	GO:0010605	negative regulation of macromolecule metabolic process
3.36	3.98e-02	GO:0010769	regulation of cell morphogenesis involved in differentiation
3.36	3.98e-02	GO:0022604	regulation of cell morphogenesis
3.95	4.06e-02	GO:0021953	central nervous system neuron differentiation
2.16	4.20e-02	GO:0051276	chromosome organization
12.67	4.21e-02	GO:0006206	pyrimidine base metabolic process
1.75	4.23e-02	GO:0009892	negative regulation of metabolic process

Gene overrepresentation in compartment category:

enrichment	p-value	GO term	description
1.71	6.95e-20	GO:0005634	nucleus
1.32	1.89e-16	GO:0005622	intracellular
1.32	3.95e-15	GO:0044424	intracellular part
1.34	2.40e-12	GO:0043229	intracellular organelle
1.34	4.00e-12	GO:0043226	organelle
1.30	6.70e-08	GO:0043231	intracellular membrane-bounded organelle
1.30	8.80e-08	GO:0043227	membrane-bounded organelle
1.97	1.24e-07	GO:0005856	cytoskeleton
1.85	1.67e-07	GO:0044428	nuclear part
1.13	8.89e-07	GO:0005623	cell
1.13	8.89e-07	GO:0044464	cell part
1.65	2.10e-06	GO:0043228	non-membrane-bounded organelle
1.65	2.10e-06	GO:0043232	intracellular non-membrane-bounded organelle
2.47	7.15e-06	GO:0043005	neuron projection
2.00	9.17e-06	GO:0042995	cell projection
1.80	3.60e-05	GO:0031981	nuclear lumen
2.37	4.74e-05	GO:0015630	microtubule cytoskeleton
5.26	9.65e-05	GO:0030426	growth cone
5.07	1.53e-04	GO:0030427	site of polarized growth
1.51	1.73e-04	GO:0043234	protein complex
2.15	2.69e-04	GO:0044451	nucleoplasm part
1.95	3.40e-04	GO:0044430	cytoskeletal part
2.88	6.19e-04	GO:0005874	microtubule
2.52	2.10e-03	GO:0044297	cell body
2.55	2.44e-03	GO:0043025	neuronal cell body
1.35	2.68e-03	GO:0044422	organelle part
1.60	2.93e-03	GO:0070013	intracellular organelle lumen
1.60	3.14e-03	GO:0043233	organelle lumen
1.59	3.82e-03	GO:0031974	membrane-enclosed lumen
13.82	4.02e-03	GO:0071565	nBAF complex
1.34	4.40e-03	GO:0044446	intracellular organelle part
1.76	7.58e-03	GO:0005654	nucleoplasm
2.00	7.81e-03	GO:0030054	cell junction
2.57	1.41e-02	GO:0030424	axon
2.49	1.61e-02	GO:0015629	actin cytoskeleton
1.19	1.71e-02	GO:0005737	cytoplasm
1.36	1.92e-02	GO:0032991	macromolecular complex
3.76	2.16e-02	GO:0000790	nuclear chromatin
3.94	2.82e-02	GO:0030027	lamellipodium
2.04	3.20e-02	GO:0045202	synapse
13.52	3.47e-02	GO:0071564	npBAF complex

Gene overrepresentation in function category:

enrichment	p-value	GO term	description
1.35	2.60e-19	GO:0005488	binding
1.56	1.04e-14	GO:0005515	protein binding
1.77	8.67e-10	GO:0003676	nucleic acid binding
2.05	3.09e-08	GO:0008270	zinc ion binding
1.85	2.50e-07	GO:0003677	DNA binding
1.81	5.43e-06	GO:0046914	transition metal ion binding
2.11	1.11e-05	GO:0030528	transcription regulator activity
3.60	2.37e-05	GO:0003682	chromatin binding
2.16	6.15e-05	GO:0001071	nucleic acid binding transcription factor activity
2.16	6.15e-05	GO:0003700	sequence-specific DNA binding transcription factor activity
1.43	6.40e-04	GO:0046872	metal ion binding
1.41	1.26e-03	GO:0043169	cation binding
1.41	1.55e-03	GO:0043167	ion binding
16.89	1.62e-03	GO:0016812	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
5.96	1.97e-03	GO:0008013	beta-catenin binding
1.89	4.24e-03	GO:0019899	enzyme binding
2.10	1.22e-02	GO:0008092	cytoskeletal protein binding
1.49	1.30e-02	GO:0000166	nucleotide binding
15.20	2.77e-02	GO:0045294	alpha-catenin binding