Motif ID: SRF.p3

Z-value: 1.213

Transcription factors associated with SRF.p3:

NameEntrezDescription
Srf 20807 serum response factor

Activity-expression correlation:

GenePromoterPearsonP-valuePlot
Srfchr17_-_466931100.183.0e-01Click!


Activity profile for motif SRF.p3.

activity profile for motif SRF.p3


Sorted Z-values histogram for motif SRF.p3

Sorted Z-values for motif SRF.p3



Network of associatons between targets according to the STRING database.



First level regulatory network of SRF.p3

PNG image of the network

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Top targets:


Promoter Score Refseq Gene Description
chr18_+_35020859 23.650 NM_007913
Egr1
early growth response 1
chr2_+_156601175 8.965 NM_172118
Myl9
myosin, light polypeptide 9, regulatory
chr2_+_156601150 6.754 Myl9
myosin, light polypeptide 9, regulatory
chr8_-_87297283 5.418 Nfix
nuclear factor I/X
chr19_-_34329804 5.182 NM_007392
Acta2
actin, alpha 2, smooth muscle, aorta
chr11_-_114657186 4.785 NM_028055
Btbd17
BTB (POZ) domain containing 17
chr13_+_23838602 3.858 NM_175664
Hist1h2bb
histone cluster 1, H2bb
chr9_-_45743950 3.817 Tagln
transgelin
chr8_-_73905790 3.629 NM_010150
Nr2f6
nuclear receptor subfamily 2, group F, member 6
chr15_-_99650502 3.556 NM_023063
Lima1
LIM domain and actin binding 1
chr12_+_31950097 3.452 NM_008482
Lamb1
laminin B1
chr2_-_147011990 3.305 NM_001077632
NM_010919
Nkx2-2

NK2 transcription factor related, locus 2 (Drosophila)

chr10_+_79451369 3.074 Cnn2
calponin 2
chr9_+_43851477 2.897 Thy1
thymus cell antigen 1, theta
chr15_-_77672472 2.893 NM_022410
Myh9
myosin, heavy polypeptide 9, non-muscle
chr12_+_86814822 2.883 NM_010234
Fos
FBJ osteosarcoma oncogene
chr9_+_7764067 2.727 NM_133739
Tmem123
transmembrane protein 123
chr7_-_149846916 2.706 NM_001122736
Igf2
insulin-like growth factor 2
chr13_+_51942043 2.519 NM_011817
Gadd45g
growth arrest and DNA-damage-inducible 45 gamma
chr10_+_79451332 2.472 NM_007725
Cnn2
calponin 2
chr6_+_42300005 2.450 Zyx
zyxin
chr3_-_57379600 2.226 NM_133784
Wwtr1
WW domain containing transcription regulator 1
chr12_+_7984451 2.200 NM_009693
Apob
apolipoprotein B
chr14_-_65035722 2.152 Msra
methionine sulfoxide reductase A
chr11_-_86400309 1.784 Tmem49
transmembrane protein 49
chr8_-_108467294 1.711 NM_008490
Lcat
lecithin cholesterol acyltransferase
chr2_+_131776596 1.688 NM_001126338
NM_023043
Prnd

prion protein dublet

chr3_+_14863507 1.588 NM_007606
Car3
carbonic anhydrase 3
chr16_+_57549340 1.517 NM_001177871
Filip1l
filamin A interacting protein 1-like
chr15_+_101097276 1.358 NM_010444
Nr4a1
nuclear receptor subfamily 4, group A, member 1
chr8_-_73905523 1.322 Nr2f6
nuclear receptor subfamily 2, group F, member 6
chr14_+_41918624 1.146 NM_133653
Mat1a
methionine adenosyltransferase I, alpha
chr1_-_167638156 1.132 NM_001038846
NM_178593
Rcsd1

RCSD domain containing 1

chr14_-_46149660 1.106 NM_146054
Fermt2
fermitin family homolog 2 (Drosophila)
chr7_-_52252911 1.097 NM_029410
Bcl2l12
BCL2-like 12 (proline rich)
chr2_-_13192850 1.087 NM_009105
Rsu1
Ras suppressor protein 1
chr12_+_31950252 1.067 Lamb1
laminin B1
chr7_+_73007017 1.050 NM_011048
Pcsk6
proprotein convertase subtilisin/kexin type 6
chr1_-_95342228 1.028 Hdlbp
high density lipoprotein (HDL) binding protein
chr3_+_96073622 1.010 NM_175666
Hist2h2bb
histone cluster 2, H2bb
chr1_-_95342168 1.006 Hdlbp
high density lipoprotein (HDL) binding protein
chr2_-_181406313 0.927 NM_009236
Sox18
SRY-box containing gene 18
chr8_-_48760182 0.908 Ing2
inhibitor of growth family, member 2
chr11_-_70501430 0.890 Camta2
calmodulin binding transcription activator 2
chr15_+_10994444 0.879 NM_175501
Adamts12
a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 12
chr11_+_101286385 0.859 NM_172566
Rundc1
RUN domain containing 1
chr7_-_77511242 0.815 Nr2f2
nuclear receptor subfamily 2, group F, member 2
chr7_-_106501620 0.788 Serpinh1
serine (or cysteine) peptidase inhibitor, clade H, member 1
chr1_-_33814590 0.760 NM_145392
Bag2
BCL2-associated athanogene 2
chr9_+_72892614 0.697 NM_023635
Rab27a
RAB27A, member RAS oncogene family
chr4_+_43970559 0.674 NM_027450
Glipr2
GLI pathogenesis-related 2
chr18_-_56721860 0.669 Aldh7a1
aldehyde dehydrogenase family 7, member A1
chr18_-_56721902 0.639 NM_138600
Aldh7a1
aldehyde dehydrogenase family 7, member A1
chr1_-_33814537 0.614 Bag2
BCL2-associated athanogene 2
chr1_+_74438182 0.595 NM_153088
Ctdsp1
CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1
chrX_+_7341083 0.592 Tcfe3
transcription factor E3
chr14_-_122364309 0.591 NM_183031
Gpr183
G protein-coupled receptor 183
chr8_+_96910392 0.574 NM_022331
Herpud1
homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1
chr4_+_128404814 0.565 NM_001195083
Phc2
polyhomeotic-like 2 (Drosophila)
chr11_+_98724908 0.564 NM_197940
Wipf2
WAS/WASL interacting protein family, member 2
chr14_+_21748646 0.552 NM_009502
Vcl
vinculin
chr14_-_71041964 0.524 NM_008004
Fgf17
fibroblast growth factor 17
chr4_+_126700088 0.523 Sfpq
splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated)
chr7_-_144506112 0.522 NM_001113414
NM_001113415
NM_010096
Ebf3


early B-cell factor 3


chr1_-_43220725 0.521 Fhl2
four and a half LIM domains 2
chr14_+_21748602 0.507 Vcl
vinculin
chr7_-_133942605 0.471 NM_001177307
Aldoa
aldolase A, fructose-bisphosphate
chr7_+_135390456 0.445 Tgfb1i1
transforming growth factor beta 1 induced transcript 1
chr19_+_8963366 0.440 NM_025463
1810009A15Rik
RIKEN cDNA 1810009A15 gene
chr5_+_138696988 0.435 0910001L09Rik
RIKEN cDNA 0910001L09 gene
chr16_+_14705932 0.433 NM_011415
Snai2
snail homolog 2 (Drosophila)
chr4_+_129985957 0.427 NM_010174
Fabp3
fatty acid binding protein 3, muscle and heart
chr5_-_143667004 0.422 Actb
actin, beta
chr19_-_4989865 0.419 NM_153553
Npas4
neuronal PAS domain protein 4
chr9_-_45744036 0.404 NM_011526
Tagln
transgelin
chr17_+_5941279 0.389 NM_001113352
NM_001113353
Synj2

synaptojanin 2

chr12_-_111934580 0.381 NM_010480
Hsp90aa1
heat shock protein 90, alpha (cytosolic), class A member 1
chr11_+_96164825 0.380 NM_008268
Hoxb5
homeobox B5
chr16_+_24393435 0.379 NM_178665
Lpp
LIM domain containing preferred translocation partner in lipoma
chr7_-_108080671 0.378 NM_001081116
Arhgef17
Rho guanine nucleotide exchange factor (GEF) 17
chr11_+_50191220 0.375 NM_021510
Hnrnph1
heterogeneous nuclear ribonucleoprotein H1
chr5_+_91197542 0.368 NM_023785
Ppbp
pro-platelet basic protein
chr10_-_5913894 0.367 NM_024261
1700052N19Rik
RIKEN cDNA 1700052N19 gene
chr9_+_44143931 0.364


chr2_-_127346987 0.359 Kcnip3
Kv channel interacting protein 3, calsenilin
chrX_-_45388010 0.350 NM_013912
Apln
apelin
chr11_+_3883638 0.347 NM_001177703
NM_016922
Gal3st1

galactose-3-O-sulfotransferase 1

chr5_+_138696947 0.328 0910001L09Rik
RIKEN cDNA 0910001L09 gene
chr5_+_44260035 0.322 NM_007646
Cd38
CD38 antigen
chr5_-_5514787 0.317 NM_001193660
NM_001193659
NM_001193661
NM_022890
Cldn12



claudin 12



chr7_-_19856882 0.316 Vasp
vasodilator-stimulated phosphoprotein
chr9_+_55889639 0.309 NM_011992
Rcn2
reticulocalbin 2
chr9_-_43047862 0.296 NM_178644
Oaf
OAF homolog (Drosophila)
chr16_+_55966458 0.295 Rpl24
ribosomal protein L24
chr16_+_55966387 0.292 NM_024218
Rpl24
ribosomal protein L24
chr3_+_89240625 0.271 NM_146131
Pbxip1
pre-B-cell leukemia transcription factor interacting protein 1
chr11_-_101285982 0.267 1700113I22Rik
RIKEN cDNA 1700113I22 gene
chr4_-_40226373 0.258 NM_001033305
Ndufb6
NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6
chr9_+_43851466 0.258 NM_009382
Thy1
thymus cell antigen 1, theta
chr11_-_120593289 0.256 Cbr2
carbonyl reductase 2
chr10_-_93052348 0.237 NM_027246
Snrpf
small nuclear ribonucleoprotein polypeptide F
chr1_+_63223728 0.230 Eef1b2
eukaryotic translation elongation factor 1 beta 2
chr2_+_84680479 0.224 NM_024497
Slc43a1
solute carrier family 43, member 1
chr12_+_21322219 0.223 NM_026347
Iah1
isoamyl acetate-hydrolyzing esterase 1 homolog (S. cerevisiae)
chr4_-_63064369 0.220 NM_001045514
Akna
AT-hook transcription factor
chr19_-_8963245 0.218 5730408K05Rik
RIKEN cDNA 5730408K05 gene
chr11_+_96164905 0.214 Hoxb5
homeobox B5
chr5_-_38952777 0.214 NM_011715
Wdr1
WD repeat domain 1
chr8_-_48760040 0.193 Ing2
inhibitor of growth family, member 2
chr10_-_6080145 0.193 NM_031185
Akap12
A kinase (PRKA) anchor protein (gravin) 12
chr7_-_29164215 0.191 NM_011756
Zfp36
zinc finger protein 36
chr10_-_80024245 0.186 NM_025852
Rexo1
REX1, RNA exonuclease 1 homolog (S. cerevisiae)
chr8_+_28153013 0.180 NM_001039077
NM_001039078
NM_054057
Prosc


proline synthetase co-transcribed


chr2_-_84316891 0.178 NM_001177319
NM_001177320
Tfpi

tissue factor pathway inhibitor

chr8_-_48760457 0.171 NM_023503
Ing2
inhibitor of growth family, member 2
chr8_+_48760744 0.170 AA386476
expressed sequence AA386476
chr17_-_45710161 0.161 NM_008302
Hsp90ab1
heat shock protein 90 alpha (cytosolic), class B member 1
chr5_+_17080553 0.155 NM_013657
Sema3c
sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C
chr19_+_8911956 0.150 NM_001136064
Bscl2
Bernardinelli-Seip congenital lipodystrophy 2 homolog (human)
chr7_-_116925058 0.144 NM_020610
Nrip3
nuclear receptor interacting protein 3
chr10_-_39451648 0.139 E130307A14Rik
RIKEN cDNA E130307A14 gene
chr9_-_42913797 0.137 NM_027144
Arhgef12
Rho guanine nucleotide exchange factor (GEF) 12
chr14_-_21167269 0.135 Ecd
ecdysoneless homolog (Drosophila)
chr2_+_5058794 0.130 NM_028804
Ccdc3
coiled-coil domain containing 3
chr5_-_77544147 0.129 NM_175606
Hopx
HOP homeobox
chr15_-_31297286 0.126 NM_001164441
NM_026153
NM_027496
Ankrd33b


ankyrin repeat domain 33B


chr13_+_46060591 0.124 5033430I15Rik
RIKEN cDNA 5033430I15 gene
chr1_+_182872588 0.123 NM_144794
Tmem63a
transmembrane protein 63a
chr7_+_3293008 0.123 NM_001093766
Myadm
myeloid-associated differentiation marker
chr5_+_104183148 0.120 NM_133919
Aff1
AF4/FMR2 family, member 1
chr11_+_101286411 0.118 Rundc1
RUN domain containing 1
chr5_+_124357243 0.116 NM_026603
Denr
density-regulated protein
chr6_+_3954225 0.115 Gng11
guanine nucleotide binding protein (G protein), gamma 11
chr1_+_63223689 0.111 Eef1b2
eukaryotic translation elongation factor 1 beta 2
chr17_+_89025866 0.109 NM_029858
Ston1
stonin 1
chr1_-_78193381 0.108 NM_001159520
NM_008781
Pax3

paired box gene 3

chr11_+_75469516 0.107 NM_001080775
Myo1c
myosin IC
chr10_-_30375572 0.106 NM_001111267
Ncoa7
nuclear receptor coactivator 7
chr11_+_75327028 0.106 NM_001004157
Scarf1
scavenger receptor class F, member 1
chr16_+_24393797 0.104 Lpp
LIM domain containing preferred translocation partner in lipoma
chr6_+_3954259 0.102 Gng11
guanine nucleotide binding protein (G protein), gamma 11
chr12_+_82960953 0.086 NM_018814
Pcnx
pecanex homolog (Drosophila)
chr16_+_34921598 0.081 Mylk
myosin, light polypeptide kinase
chr6_-_52154325 0.081 Hoxa5
homeobox A5
chr10_+_127832280 0.073


chr7_-_19857121 0.068 Vasp
vasodilator-stimulated phosphoprotein
chr7_-_106501584 0.067 Serpinh1
serine (or cysteine) peptidase inhibitor, clade H, member 1
chr5_-_135422795 0.067 NM_009903
Cldn4
claudin 4
chr5_-_107125783 0.061 NM_026856
Zfp644
zinc finger protein 644
chr2_-_127347102 0.061 NM_019789
Kcnip3
Kv channel interacting protein 3, calsenilin
chr13_+_112476509 0.059 Mier3
mesoderm induction early response 1, family member 3
chr8_-_108467275 0.058 Lcat
lecithin cholesterol acyltransferase
chr9_+_7764285 0.057


chr6_-_85463535 0.057 NM_020596
Egr4
early growth response 4
chr4_-_138648762 0.055 NM_008675
Nbl1
neuroblastoma, suppression of tumorigenicity 1
chr11_+_20124648 0.055 Rab1
RAB1, member RAS oncogene family
chr6_+_136756804 0.039 H2afj
H2A histone family, member J
chr1_+_74438416 0.037 Ctdsp1
CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1
chr17_+_26792701 0.036 Ergic1
endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
chr18_+_37120093 0.036 NM_009959
Pcdha5
protocadherin alpha 5
chr5_-_135028113 0.035 Clip2
CAP-GLY domain containing linker protein 2
chr13_+_42776161 0.035 Phactr1
phosphatase and actin regulator 1
chr11_-_70501586 0.035 NM_001190376
NM_001190378
NM_001190379
NM_178116
Camta2



calmodulin binding transcription activator 2



chr5_+_30890610 0.033 Kcnk3
potassium channel, subfamily K, member 3
chr19_-_7114388 0.033 NM_016737
Stip1
stress-induced phosphoprotein 1
chr1_-_95375363 0.032 Hdlbp
high density lipoprotein (HDL) binding protein
chr2_+_31543895 0.031 NM_001112703
Abl1
c-abl oncogene 1, non-receptor tyrosine kinase
chr3_+_95462705 0.031 Mcl1
myeloid cell leukemia sequence 1
chr5_+_138635541 0.030 NM_177878
Mblac1
metallo-beta-lactamase domain containing 1
chr10_-_33816255 0.026 NM_178908
Fam26e
family with sequence similarity 26, member E
chr17_+_26792031 0.024 Ergic1
endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
chr7_+_130337876 0.020 Tnrc6a
trinucleotide repeat containing 6a
chr4_+_34497840 0.019 NM_001007589
Akirin2
akirin 2
chr15_+_78765348 0.019 NM_133800
Nol12
nucleolar protein 12
chr1_+_159436875 0.016 NM_033354
Sec16b
SEC16 homolog B (S. cerevisiae)
chr8_-_87417600 0.015 Gcdh
glutaryl-Coenzyme A dehydrogenase
chr17_+_37006518 0.012 NM_011280
Trim10
tripartite motif-containing 10
chr7_+_52253028 0.011 NM_016849
Irf3
interferon regulatory factor 3
chr5_+_98609872 0.011 NM_029947
Prdm8
PR domain containing 8
chr15_+_78707972 0.010 Gga1
golgi associated, gamma adaptin ear containing, ARF binding protein 1
chr4_+_108000728 0.010 NM_027250
2010305A19Rik
RIKEN cDNA 2010305A19 gene
chr6_-_122806122 0.008 NM_009779
C3ar1
complement component 3a receptor 1
chr14_+_13116767 0.007 3830406C13Rik
RIKEN cDNA 3830406C13 gene
chr14_+_37881214 0.006 NM_173418
Lrit2
leucine-rich repeat, immunoglobulin-like and transmembrane domains 2
chr2_-_113057189 0.004 Ryr3
ryanodine receptor 3

Gene Ontology Analysis

Gene overrepresentation in process category:

enrichment p-value GO term description
7.28 1.06e-02 GO:0045944 positive regulation of transcription from RNA polymerase II promoter
5.79 1.39e-02 GO:0010628 positive regulation of gene expression
3.28 1.67e-02 GO:0048731 system development
2.83 1.99e-02 GO:0032502 developmental process
2.87 3.35e-02 GO:0007275 multicellular organismal development
4.96 4.12e-02 GO:0006357 regulation of transcription from RNA polymerase II promoter

Gene overrepresentation in compartment category:

enrichment p-value GO term description
69.14 5.22e-07 GO:0001725 stress fiber
64.43 7.54e-07 GO:0032432 actin filament bundle
61.63 9.50e-07 GO:0042641 actomyosin
14.15 2.79e-05 GO:0015629 actin cytoskeleton
53.16 1.46e-03 GO:0032994 protein-lipid complex
53.16 1.46e-03 GO:0034358 plasma lipoprotein particle
51.55 4.27e-02 GO:0034364 high-density lipoprotein particle

Nothing significant found in function category.