Motif ID: YY1.p2

Z-value: 3.976

Transcription factors associated with YY1.p2:

NameEntrezDescription
Yy1 22632 YY1 transcription factor

Activity-expression correlation:

GenePromoterPearsonP-valuePlot
Yy1chr12_+_1100311530.734.9e-07Click!


Activity profile for motif YY1.p2.

activity profile for motif YY1.p2


Sorted Z-values histogram for motif YY1.p2

Sorted Z-values for motif YY1.p2



Network of associatons between targets according to the STRING database.



First level regulatory network of YY1.p2

PNG image of the network

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Top targets:


Promoter Score Refseq Gene Description
chr7_-_111001598 48.038 NM_008221
Hbb-y
hemoglobin Y, beta-like embryonic chain
chr7_-_110991602 22.722 NM_008219
Hbb-bh1
hemoglobin Z, beta-like embryonic chain
chr7_-_56892061 17.797 NM_001005232
Dbx1
developing brain homeobox 1
chr4_+_154335029 15.104 NM_010419
Hes5
hairy and enhancer of split 5 (Drosophila)
chr9_+_74709673 13.006 NM_008262
Onecut1
one cut domain, family member 1
chr9_+_64988960 12.252 NM_008988
Igdcc3
immunoglobulin superfamily, DCC subclass, member 3
chr5_-_38215607 11.819 NM_010835
Msx1
homeobox, msh-like 1
chr10_+_79317409 11.202 Ptbp1
polypyrimidine tract binding protein 1
chr11_+_23978029 10.718 NM_001159289
NM_016707
Bcl11a

B-cell CLL/lymphoma 11A (zinc finger protein)

chr3_-_126701320 10.527 Ank2
ankyrin 2, brain
chr2_-_73613381 9.960 NM_001113246
NM_001166603
Chn1

chimerin (chimaerin) 1

chr14_-_104867215 9.681 NM_011143
Pou4f1
POU domain, class 4, transcription factor 1
chr7_+_30088984 9.577 NM_013874
Dpf1
D4, zinc and double PHD fingers family 1
chr5_-_67490295 8.809 NM_008888
Phox2b
paired-like homeobox 2b
chr4_-_43536296 8.512 Tpm2
tropomyosin 2, beta
chr6_-_83071206 8.447 Wbp1
WW domain binding protein 1
chr10_+_79144868 8.440 NM_177613
Cdc34
cell division cycle 34 homolog (S. cerevisiae)
chr16_-_22163035 8.318 Igf2bp2
insulin-like growth factor 2 mRNA binding protein 2
chr11_+_23978110 8.235 Bcl11a
B-cell CLL/lymphoma 11A (zinc finger protein)
chr13_+_23627286 8.138 NM_145073
Hist1h3g
histone cluster 1, H3g
chr11_+_32176599 8.113 NM_010405
Hba-x
hemoglobin X, alpha-like embryonic chain in Hba complex
chr14_-_69902984 7.811 Slc25a37
solute carrier family 25, member 37
chr2_+_13496013 7.796 Vim
vimentin
chr13_+_23844213 7.792 NM_178203
Hist1h3b
histone cluster 1, H3b
chr2_+_13495931 7.722 NM_011701
Vim
vimentin
chr18_+_67365012 7.698 NM_024190
Chmp1b
chromatin modifying protein 1B
chr16_+_55966458 7.665 Rpl24
ribosomal protein L24
chr19_-_41818111 7.662 Slit1
slit homolog 1 (Drosophila)
chr5_+_129526311 7.517 Ran
RAN, member RAS oncogene family
chr1_-_170361985 7.476 Pbx1
pre B-cell leukemia transcription factor 1
chr11_+_62366262 7.233 Ubb
ubiquitin B
chr1_+_182499091 7.128 NM_007415
Parp1
poly (ADP-ribose) polymerase family, member 1
chr14_-_19103447 7.107 NM_025586
Rpl15
ribosomal protein L15
chr6_-_38826156 7.082 NM_010433
Hipk2
homeodomain interacting protein kinase 2
chr13_-_23663006 7.069 NM_178187
Hist1h2ae
histone cluster 1, H2ae
chr3_+_145784635 7.050 NM_134160
Mcoln3
mucolipin 3
chr1_+_182499015 6.995 Parp1
poly (ADP-ribose) polymerase family, member 1
chr2_+_75670296 6.927 Agps
alkylglycerone phosphate synthase
chr18_-_6490828 6.901 Epc1
enhancer of polycomb homolog 1 (Drosophila)
chr11_-_50105794 6.844 NM_175334
Maml1
mastermind like 1 (Drosophila)
chr14_-_21000972 6.843 NM_021542
Kcnk5
potassium channel, subfamily K, member 5
chr2_-_179839111 6.773 Hrh3
histamine receptor H3
chr2_-_24775083 6.759 NM_001012518
NM_001109686
NM_001109687
NM_172545
Ehmt1



euchromatic histone methyltransferase 1



chr2_-_144096518 6.677 Snx5
sorting nexin 5
chr11_+_48613820 6.571 NM_008143
Gnb2l1
guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1
chr6_-_12699189 6.562 NM_001164805
Thsd7a
thrombospondin, type I, domain containing 7A
chr19_+_39005433 6.513 NM_008234
Hells
helicase, lymphoid specific
chr18_+_70727897 6.491 NM_010773
Mbd2
methyl-CpG binding domain protein 2
chr9_+_122860175 6.459 NM_010620
Kif15
kinesin family member 15
chr11_+_102465839 6.450 Fzd2
frizzled homolog 2 (Drosophila)
chr16_+_55966387 6.400 NM_024218
Rpl24
ribosomal protein L24
chr19_+_6363686 6.348 NM_001110791
NM_011750
Sf1

splicing factor 1

chr6_+_15135505 6.329 NM_212435
Foxp2
forkhead box P2
chr11_-_63735652 6.323 NM_018805
Hs3st3b1
heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1
chr7_+_16986478 6.244 NM_198631
Zc3h4
zinc finger CCCH-type containing 4
chr1_-_170361525 6.216 Pbx1
pre B-cell leukemia transcription factor 1
chr11_-_70468061 6.208 Pfn1
profilin 1
chr16_-_22163264 6.155 NM_183029
Igf2bp2
insulin-like growth factor 2 mRNA binding protein 2
chr18_-_6490682 6.146 Epc1
enhancer of polycomb homolog 1 (Drosophila)
chr9_-_71743854 5.988 Tcf12
transcription factor 12
chr5_+_135663096 5.972 NM_011714
Baz1b
bromodomain adjacent to zinc finger domain, 1B
chr14_-_67691221 5.920 NM_028032
Ppp2r2a
protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), alpha isoform
chr12_-_47919695 5.859 NM_021361
Nova1
neuro-oncological ventral antigen 1
chr14_-_109313298 5.793 Slitrk1
SLIT and NTRK-like family, member 1
chr2_-_179777080 5.684 NM_011969
Psma7
proteasome (prosome, macropain) subunit, alpha type 7
chr4_+_41082861 5.668 Ube2r2
ubiquitin-conjugating enzyme E2R 2
chr2_-_44965603 5.540 Zeb2
zinc finger E-box binding homeobox 2
chr18_+_56867378 5.487 NM_010721
Lmnb1
lamin B1
chr12_-_28027272 5.484 Sox11
SRY-box containing gene 11
chr2_-_164705231 5.465 4930445K14Rik
RIKEN cDNA 4930445K14 gene
chr6_-_115626589 5.448 NM_029780
Raf1
v-raf-leukemia viral oncogene 1
chr11_+_44332878 5.378 NM_001166553
Rnf145
ring finger protein 145
chr12_+_53800369 5.378 NM_198111
Akap6
A kinase (PRKA) anchor protein 6
chr7_-_152125661 5.304 Ccnd1
cyclin D1
chr17_+_29169612 5.280 Srsf3
serine/arginine-rich splicing factor 3
chr13_-_21808011 5.258 NM_178199
Hist1h2bl
histone cluster 1, H2bl
chr6_+_47403899 5.249 Cul1
cullin 1
chr8_-_113370626 5.228 NM_133953
Sf3b3
splicing factor 3b, subunit 3
chr9_+_57351848 5.207 NM_133982
Rpp25
ribonuclease P 25 subunit (human)
chr1_+_42753970 5.193 NM_008900
Pou3f3
POU domain, class 3, transcription factor 3
chr13_+_23838602 5.084 NM_175664
Hist1h2bb
histone cluster 1, H2bb
chr7_-_110962416 5.075 NM_008220
NM_016956
Hbb-b1
Hbb-b2
hemoglobin, beta adult major chain
hemoglobin, beta adult minor chain
chr7_+_52973440 5.071 NM_009077
Rpl18
ribosomal protein L18
chr2_-_132078887 5.068 NM_011045
Pcna
proliferating cell nuclear antigen
chr10_-_61246611 5.063 NM_207000
H2afy2
H2A histone family, member Y2
chr3_+_68808879 5.060 NM_133786
Smc4
structural maintenance of chromosomes 4
chr19_+_40969176 5.059 NM_028319
E130314M14Rik
Zfp518a
RIKEN cDNA E130314M14 gene
zinc finger protein 518A
chr14_+_35487052 5.049 NM_001004436
Wapal
wings apart-like homolog (Drosophila)
chr5_+_89194155 4.999 Dck
deoxycytidine kinase
chr13_-_104968472 4.991 NM_001093759
NM_001093760
NM_025879
2410002O22Rik


RIKEN cDNA 2410002O22 gene


chr2_+_13495963 4.982 Vim
vimentin
chr16_-_4719058 4.899 NM_026393
Nmral1
NmrA-like family domain containing 1
chr1_-_157882999 4.842 Tor1aip1
torsin A interacting protein 1
chr5_+_123794508 4.838 Bcl7a
B-cell CLL/lymphoma 7A
chr16_+_33056538 4.834 NM_001130485
NM_001130484
NM_021338
Rpl35a


ribosomal protein L35A


chr10_+_110910277 4.802 Nap1l1
nucleosome assembly protein 1-like 1
chr8_-_73905523 4.799 Nr2f6
nuclear receptor subfamily 2, group F, member 6
chr3_+_146162758 4.777 NM_010318
Gng5
guanine nucleotide binding protein (G protein), gamma 5
chr7_+_133630844 4.728 NM_001163713
NM_172745
Tufm

Tu translation elongation factor, mitochondrial

chr9_-_96378951 4.725 NM_011279
Rnf7
ring finger protein 7
chr7_-_88974235 4.711 NM_146193
Btbd1
BTB (POZ) domain containing 1
chr4_-_61869287 4.685 Zfp37
zinc finger protein 37
chr3_+_151873407 4.672 NM_057172
Fubp1
far upstream element (FUSE) binding protein 1
chr2_+_84680479 4.669 NM_024497
Slc43a1
solute carrier family 43, member 1
chr1_+_131170034 4.652 Thsd7b
thrombospondin, type I, domain containing 7B
chr11_-_97048933 4.643 Kpnb1
karyopherin (importin) beta 1
chr3_-_151873242 4.639 NM_027287
Dnajb4
DnaJ (Hsp40) homolog, subfamily B, member 4
chr7_-_121261237 4.623 Rras2
related RAS viral (r-ras) oncogene homolog 2
chr11_-_97049143 4.622 Kpnb1
karyopherin (importin) beta 1
chr15_+_98620287 4.615 NM_021279
Wnt1
wingless-related MMTV integration site 1
chr10_-_93052348 4.601 NM_027246
Snrpf
small nuclear ribonucleoprotein polypeptide F
chr13_+_23663264 4.554 NM_178196
Hist1h2bg
histone cluster 1, H2bg
chr13_-_22134795 4.547 NM_178186
Hist1h2ag
Hist1h2ai
histone cluster 1, H2ag
histone cluster 1, H2ai
chr16_-_33056255 4.515 NM_178378
Iqcg
IQ motif containing G
chr11_-_70468130 4.510 NM_011072
Pfn1
profilin 1
chr2_+_75497282 4.499 NM_053263
NM_146130
NM_198090
Hnrnpa3


Gm6793
heterogeneous nuclear ribonucleoprotein A3


heterogeneous nuclear ribonucleoprotein A3 pseudogene
chr14_-_47407948 4.494 NM_009919
Cnih
cornichon homolog (Drosophila)
chr19_+_41557475 4.484 Lcor
ligand dependent nuclear receptor corepressor
chr12_-_102321835 4.472 Smek1
SMEK homolog 1, suppressor of mek1 (Dictyostelium)
chr13_+_21813912 4.463 NM_178200
Hist1h2bm
histone cluster 1, H2bm
chr13_-_23677831 4.446 Hist1h2be
histone cluster 1, H2be
chr14_-_55236828 4.418 NM_011186
Psmb5
proteasome (prosome, macropain) subunit, beta type 5
chr10_-_39977451 4.414 NM_026113
Gtf3c6
general transcription factor IIIC, polypeptide 6, alpha
chrX_-_71212314 4.391 Hcfc1
host cell factor C1
chr1_-_93295259 4.385 Ilkap
integrin-linked kinase-associated serine/threonine phosphatase 2C
chr8_+_107821562 4.355 NM_148952
E2f4
E2F transcription factor 4
chr11_+_44332426 4.335 NM_028862
Rnf145
ring finger protein 145
chr13_+_21808259 4.324 NM_178182
Hist1h2ai
histone cluster 1, H2ai
chr8_+_108384479 4.318 NM_026532
Nutf2
nuclear transport factor 2
chr11_+_75492764 4.283 NM_133656
Crk
v-crk sarcoma virus CT10 oncogene homolog (avian)
chr7_-_34953455 4.266 NM_016682
Uba2
ubiquitin-like modifier activating enzyme 2
chr11_-_120852554 4.244 Csnk1d
casein kinase 1, delta
chr2_+_136717938 4.241 NM_028834
2210009G21Rik
RIKEN cDNA 2210009G21 gene
chr2_-_63936044 4.234 NM_021716
Fign
fidgetin
chr13_-_3917356 4.229 NM_019671
Net1
neuroepithelial cell transforming gene 1
chr4_-_116300068 4.176 NM_001081475
Nasp
nuclear autoantigenic sperm protein (histone-binding)
chr11_-_120459646 4.173 NM_011568
Thoc4
THO complex 4
chr5_+_129526060 4.171 Ran
RAN, member RAS oncogene family
chr11_-_69182891 4.166 NM_146019
Chd3
chromodomain helicase DNA binding protein 3
chr2_+_29725034 4.162 Cercam
cerebral endothelial cell adhesion molecule
chr15_-_75751888 4.150 NM_025412
Pycrl
pyrroline-5-carboxylate reductase-like
chr3_+_101814059 4.134 NM_178777
Nhlh2
nescient helix loop helix 2
chr13_-_99696254 4.114 NM_178716
Tnpo1
transportin 1
chr4_+_125781197 4.106 NM_001145827
NM_028800
Stk40

serine/threonine kinase 40

chr6_+_64679118 4.096 NM_007500
Atoh1
atonal homolog 1 (Drosophila)
chr11_-_29447830 4.075 NM_001033865
NM_024277
Rps27a

ribosomal protein S27A

chr13_+_22135065 4.072 NM_178198
Hist1h2bj
histone cluster 1, H2bj
chr17_-_23965968 4.037 NM_026305
Tceb2
transcription elongation factor B (SIII), polypeptide 2
chr16_-_16560240 4.008 NM_139232
NM_139234
Fgd4

FYVE, RhoGEF and PH domain containing 4

chr5_+_93522440 4.008 NM_001009818
Sept11
septin 11
chr2_-_140497183 4.000 Flrt3
fibronectin leucine rich transmembrane protein 3
chr11_-_70468019 4.000 Pfn1
profilin 1
chr3_+_127336055 3.999 NM_009718
Neurog2
neurogenin 2
chr11_+_102465684 3.987 NM_020510
Fzd2
frizzled homolog 2 (Drosophila)
chr2_+_29643739 3.984 NM_178693
Coq4
coenzyme Q4 homolog (yeast)
chr4_-_155571450 3.983 Agrn
agrin
chr6_+_47827641 3.982 Zfp282
zinc finger protein 282
chr12_+_16817741 3.974 E2f6
E2F transcription factor 6
chr19_+_4962305 3.946 NM_025553
Mrpl11
mitochondrial ribosomal protein L11
chr3_+_95976435 3.943 NM_153053
Sf3b4
splicing factor 3b, subunit 4
chr13_-_21845695 3.928 NM_178183
Hist1h2ak
histone cluster 1, H2ak
chr11_+_72420705 3.896 NM_025985
Ube2g1
ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, C. elegans)
chr12_-_29320801 3.859 NM_011300
Rps7
ribosomal protein S7
chr9_+_44412931 3.847 NM_001110826
NM_007841
NM_181324
Ddx6


DEAD (Asp-Glu-Ala-Asp) box polypeptide 6


chr2_-_70663453 3.839 NM_172664
Tlk1
tousled-like kinase 1
chr11_+_69809250 3.833 NM_030064
Phf23
PHD finger protein 23
chr4_+_147415297 3.832 NM_001161798
Mthfr
5,10-methylenetetrahydrofolate reductase
chr11_-_95867076 3.830 NM_009951
Igf2bp1
insulin-like growth factor 2 mRNA binding protein 1
chr2_-_156005873 3.798 NM_133242
Rbm39
RNA binding motif protein 39
chr19_+_30105077 3.787 Uhrf2
ubiquitin-like, containing PHD and RING finger domains 2
chr6_-_127100954 3.776 NM_009829
Ccnd2
cyclin D2
chr4_-_61869471 3.776 Zfp37
zinc finger protein 37
chr4_+_41082993 3.756 NM_026275
Ube2r2
ubiquitin-conjugating enzyme E2R 2
chr4_-_123427465 3.752 NM_023423
Akirin1
akirin 1
chr1_+_173259513 3.746 Dedd
death effector domain-containing
chr6_+_38331516 3.735 NM_153600
Ttc26
tetratricopeptide repeat domain 26
chr9_-_37421173 3.735 NM_011449
Spa17
sperm autoantigenic protein 17
chr2_-_25066706 3.724 NM_021393
Cobra1
cofactor of BRCA1
chr11_+_51781124 3.712 NM_029976
Cdkn2aipnl
CDKN2A interacting protein N-terminal like
chr4_-_129012489 3.711 Rbbp4
retinoblastoma binding protein 4
chr8_-_127386864 3.702 NM_025615
2810004N23Rik
RIKEN cDNA 2810004N23 gene
chr7_+_134614507 3.695 Prr14
proline rich 14
chr3_+_32635988 3.687 Ndufb5
NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5
chr7_+_66484094 3.670 NM_173010
NM_001033962
NM_011668
Ube3a


ubiquitin protein ligase E3A


chr2_+_75670230 3.657 NM_172666
Agps
alkylglycerone phosphate synthase
chr14_+_25309938 3.643 Rps24
ribosomal protein S24
chr4_+_43071852 3.640 NM_001081413
NM_021468
Unc13b

unc-13 homolog B (C. elegans)

chr3_+_14578670 3.635 NM_007892
E2f5
E2F transcription factor 5
chr9_-_69608633 3.634 NM_022378
Foxb1
forkhead box B1
chr14_-_58283787 3.633 NM_020506
Xpo4
exportin 4
chr9_-_108469265 3.616 Ndufaf3
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 3
chr7_-_52147751 3.609 Med25
mediator of RNA polymerase II transcription, subunit 25 homolog (yeast)
chr12_+_16817772 3.596 E2f6
E2F transcription factor 6
chr9_-_44042043 3.586 NM_007619
Cbl
Casitas B-lineage lymphoma
chr5_-_134790544 3.575 NM_001080746
NM_001080747
NM_001080748
NM_001080749
NM_010365
Gtf2i




general transcription factor II I




chr1_+_74552794 3.566 Rqcd1
rcd1 (required for cell differentiation) homolog 1 (S. pombe)
chr10_-_62486581 3.562 NM_001079824
Hnrnph3
D10Bwg1070e
heterogeneous nuclear ribonucleoprotein H3
DNA segment, Chr 10, Brigham & Women's Genetics 1070 expressed
chr5_+_73305509 3.526 NM_001113423
NM_153567
Slain2

SLAIN motif family, member 2

chr6_+_125045998 3.525 NM_145979
Chd4
chromodomain helicase DNA binding protein 4
chr3_-_58329780 3.518 NM_030685
Serp1
stress-associated endoplasmic reticulum protein 1

Gene Ontology Analysis

Gene overrepresentation in process category:

enrichment p-value GO term description
1.94 1.49e-50 GO:0044260 cellular macromolecule metabolic process
2.40 4.23e-49 GO:0010467 gene expression
1.78 4.24e-41 GO:0043170 macromolecule metabolic process
2.30 5.80e-38 GO:0016070 RNA metabolic process
2.18 2.30e-37 GO:0090304 nucleic acid metabolic process
2.25 2.15e-36 GO:0034645 cellular macromolecule biosynthetic process
2.24 3.42e-36 GO:0009059 macromolecule biosynthetic process
1.63 4.43e-36 GO:0044237 cellular metabolic process
2.02 2.31e-35 GO:0006139 nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
1.58 2.74e-31 GO:0044238 primary metabolic process
1.95 4.52e-29 GO:0044249 cellular biosynthetic process
1.86 1.13e-28 GO:0034641 cellular nitrogen compound metabolic process
1.83 6.09e-28 GO:0006807 nitrogen compound metabolic process
1.91 6.70e-28 GO:0009058 biosynthetic process
1.85 3.85e-27 GO:0060255 regulation of macromolecule metabolic process
1.99 1.03e-26 GO:0010468 regulation of gene expression
1.82 3.41e-26 GO:0080090 regulation of primary metabolic process
1.81 5.61e-26 GO:0031323 regulation of cellular metabolic process
2.04 4.65e-25 GO:0051252 regulation of RNA metabolic process
1.99 1.02e-24 GO:2000112 regulation of cellular macromolecule biosynthetic process
1.46 2.29e-24 GO:0008152 metabolic process
1.96 7.63e-24 GO:0010556 regulation of macromolecule biosynthetic process
1.69 3.13e-22 GO:0019222 regulation of metabolic process
1.99 5.36e-22 GO:0006355 regulation of transcription, DNA-dependent
1.88 9.83e-22 GO:0019219 regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
1.86 4.60e-21 GO:0051171 regulation of nitrogen compound metabolic process
1.86 5.93e-21 GO:0031326 regulation of cellular biosynthetic process
1.85 1.67e-20 GO:0009889 regulation of biosynthetic process
2.11 8.00e-20 GO:0006351 transcription, DNA-dependent
2.11 9.86e-20 GO:0032774 RNA biosynthetic process
7.48 9.16e-19 GO:0006414 translational elongation
4.07 2.43e-17 GO:0006412 translation
2.58 6.03e-16 GO:0007049 cell cycle
2.99 1.87e-15 GO:0006396 RNA processing
1.82 1.16e-14 GO:0071841 cellular component organization or biogenesis at cellular level
1.79 3.47e-13 GO:0044267 cellular protein metabolic process
3.65 1.26e-12 GO:0008380 RNA splicing
3.12 6.74e-12 GO:0006325 chromatin organization
1.77 6.83e-12 GO:0071842 cellular component organization at cellular level
2.21 1.09e-11 GO:0006357 regulation of transcription from RNA polymerase II promoter
3.31 2.47e-11 GO:0034621 cellular macromolecular complex subunit organization
2.60 3.23e-11 GO:0022402 cell cycle process
2.73 5.00e-11 GO:0051276 chromosome organization
1.59 9.56e-11 GO:0071840 cellular component organization or biogenesis
3.07 1.96e-10 GO:0016071 mRNA metabolic process
1.91 3.25e-10 GO:0006996 organelle organization
1.19 6.41e-10 GO:0009987 cellular process
2.10 9.55e-10 GO:0010605 negative regulation of macromolecule metabolic process
2.86 2.20e-09 GO:0000278 mitotic cell cycle
3.19 2.92e-09 GO:0006397 mRNA processing
3.24 2.94e-09 GO:0034622 cellular macromolecular complex assembly
2.06 4.10e-09 GO:0044085 cellular component biogenesis
2.45 7.42e-09 GO:0071844 cellular component assembly at cellular level
1.55 1.30e-08 GO:0016043 cellular component organization
2.03 2.26e-08 GO:0031324 negative regulation of cellular metabolic process
1.56 4.58e-08 GO:0019538 protein metabolic process
1.96 5.16e-08 GO:0009892 negative regulation of metabolic process
2.31 5.31e-08 GO:0051253 negative regulation of RNA metabolic process
2.32 6.91e-08 GO:0045892 negative regulation of transcription, DNA-dependent
1.84 1.36e-07 GO:0010604 positive regulation of macromolecule metabolic process
5.92 3.19e-07 GO:0071824 protein-DNA complex subunit organization
2.16 4.70e-07 GO:2000113 negative regulation of cellular macromolecule biosynthetic process
2.14 5.14e-07 GO:0010558 negative regulation of macromolecule biosynthetic process
5.74 5.96e-07 GO:0006333 chromatin assembly or disassembly
2.16 6.58e-07 GO:0045934 negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
2.20 8.70e-07 GO:0043933 macromolecular complex subunit organization
2.74 1.01e-06 GO:0016568 chromatin modification
5.90 1.04e-06 GO:0065004 protein-DNA complex assembly
2.00 1.15e-06 GO:0022607 cellular component assembly
2.15 1.21e-06 GO:0010629 negative regulation of gene expression
2.13 1.31e-06 GO:0051172 negative regulation of nitrogen compound metabolic process
1.75 1.34e-06 GO:0009893 positive regulation of metabolic process
2.04 3.00e-06 GO:0009890 negative regulation of biosynthetic process
1.76 3.47e-06 GO:0031325 positive regulation of cellular metabolic process
2.04 5.44e-06 GO:0031327 negative regulation of cellular biosynthetic process
5.67 6.26e-06 GO:0034728 nucleosome organization
2.41 7.77e-06 GO:0000122 negative regulation of transcription from RNA polymerase II promoter
4.54 8.06e-06 GO:0031397 negative regulation of protein ubiquitination
2.80 1.18e-05 GO:0006511 ubiquitin-dependent protein catabolic process
2.16 1.60e-05 GO:0065003 macromolecular complex assembly
2.72 1.80e-05 GO:0051603 proteolysis involved in cellular protein catabolic process
1.54 2.00e-05 GO:0048523 negative regulation of cellular process
2.74 2.24e-05 GO:0019941 modification-dependent protein catabolic process
2.72 2.75e-05 GO:0043632 modification-dependent macromolecule catabolic process
2.54 2.77e-05 GO:0007420 brain development
2.67 2.99e-05 GO:0044257 cellular protein catabolic process
5.43 3.62e-05 GO:0031497 chromatin assembly
4.82 3.74e-05 GO:0051352 negative regulation of ligase activity
4.82 3.74e-05 GO:0051444 negative regulation of ubiquitin-protein ligase activity
5.71 4.87e-05 GO:0006334 nucleosome assembly
2.49 6.67e-05 GO:0051301 cell division
4.18 8.44e-05 GO:0051438 regulation of ubiquitin-protein ligase activity
1.86 9.06e-05 GO:0010557 positive regulation of macromolecule biosynthetic process
4.83 9.18e-05 GO:0051436 negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
3.34 1.15e-04 GO:0031396 regulation of protein ubiquitination
4.50 1.18e-04 GO:0051439 regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
4.09 1.24e-04 GO:0051340 regulation of ligase activity
2.71 1.68e-04 GO:0010608 posttranscriptional regulation of gene expression
4.62 1.85e-04 GO:0031145 anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process
1.47 1.90e-04 GO:0048519 negative regulation of biological process
4.15 2.04e-04 GO:0006323 DNA packaging
2.25 2.14e-04 GO:0022403 cell cycle phase
2.48 2.37e-04 GO:0030163 protein catabolic process
1.90 2.72e-04 GO:0045893 positive regulation of transcription, DNA-dependent
2.23 3.74e-04 GO:0044265 cellular macromolecule catabolic process
3.66 4.30e-04 GO:0071103 DNA conformation change
1.87 4.89e-04 GO:0051254 positive regulation of RNA metabolic process
1.39 6.89e-04 GO:0007275 multicellular organismal development
2.89 8.18e-04 GO:0022613 ribonucleoprotein complex biogenesis
1.81 8.99e-04 GO:0010628 positive regulation of gene expression
1.75 9.77e-04 GO:0031328 positive regulation of cellular biosynthetic process
2.15 1.09e-03 GO:0007417 central nervous system development
1.74 1.15e-03 GO:0009891 positive regulation of biosynthetic process
2.15 1.32e-03 GO:0051247 positive regulation of protein metabolic process
4.29 1.32e-03 GO:0051437 positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
1.98 1.40e-03 GO:0045944 positive regulation of transcription from RNA polymerase II promoter
1.36 1.49e-03 GO:0032502 developmental process
1.77 1.64e-03 GO:0045935 positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
2.75 2.44e-03 GO:0071843 cellular component biogenesis at cellular level
2.02 3.74e-03 GO:0009057 macromolecule catabolic process
3.04 3.74e-03 GO:0010498 proteasomal protein catabolic process
3.04 3.74e-03 GO:0043161 proteasomal ubiquitin-dependent protein catabolic process
2.86 4.11e-03 GO:0031400 negative regulation of protein modification process
1.73 4.27e-03 GO:0051173 positive regulation of nitrogen compound metabolic process
2.73 6.38e-03 GO:0034470 ncRNA processing
2.51 6.66e-03 GO:0034660 ncRNA metabolic process
3.80 7.14e-03 GO:0051443 positive regulation of ubiquitin-protein ligase activity
3.71 1.00e-02 GO:0051351 positive regulation of ligase activity
1.60 1.01e-02 GO:0007399 nervous system development
1.38 1.17e-02 GO:0048522 positive regulation of cellular process
3.23 1.18e-02 GO:0031398 positive regulation of protein ubiquitination
2.06 1.24e-02 GO:0032270 positive regulation of cellular protein metabolic process
2.46 1.45e-02 GO:0000087 M phase of mitotic cell cycle
10.37 1.60e-02 GO:0042273 ribosomal large subunit biogenesis
2.42 2.06e-02 GO:0048285 organelle fission
1.35 2.17e-02 GO:0048856 anatomical structure development
5.90 2.39e-02 GO:0070936 protein K48-linked ubiquitination
2.43 2.64e-02 GO:0000280 nuclear division
2.43 2.64e-02 GO:0007067 mitosis
2.28 3.54e-02 GO:0051248 negative regulation of protein metabolic process
1.59 4.30e-02 GO:0051246 regulation of protein metabolic process

Gene overrepresentation in compartment category:

enrichment p-value GO term description
2.04 2.84e-68 GO:0005634 nucleus
1.48 4.07e-59 GO:0044424 intracellular part
1.46 1.44e-57 GO:0005622 intracellular
1.52 9.58e-50 GO:0043229 intracellular organelle
1.52 3.43e-49 GO:0043226 organelle
1.56 2.16e-46 GO:0043227 membrane-bounded organelle
1.56 2.42e-46 GO:0043231 intracellular membrane-bounded organelle
2.48 3.52e-36 GO:0044428 nuclear part
1.98 2.85e-35 GO:0032991 macromolecular complex
1.79 5.11e-31 GO:0044446 intracellular organelle part
1.76 3.21e-29 GO:0044422 organelle part
2.34 6.09e-29 GO:0031974 membrane-enclosed lumen
2.48 1.84e-28 GO:0031981 nuclear lumen
2.35 2.07e-28 GO:0070013 intracellular organelle lumen
2.35 2.66e-28 GO:0043233 organelle lumen
2.72 4.10e-25 GO:0005654 nucleoplasm
1.79 1.21e-18 GO:0043234 protein complex
2.72 2.95e-16 GO:0044451 nucleoplasm part
3.05 2.21e-15 GO:0030529 ribonucleoprotein complex
1.15 3.14e-14 GO:0005623 cell
1.15 3.14e-14 GO:0044464 cell part
1.74 7.78e-14 GO:0043228 non-membrane-bounded organelle
1.74 7.78e-14 GO:0043232 intracellular non-membrane-bounded organelle
1.31 3.25e-13 GO:0005737 cytoplasm
1.74 1.05e-07 GO:0005829 cytosol
2.51 1.59e-07 GO:0044427 chromosomal part
3.49 3.36e-07 GO:0005840 ribosome
2.74 3.87e-07 GO:0005667 transcription factor complex
2.40 3.88e-07 GO:0005694 chromosome
3.69 2.19e-06 GO:0005681 spliceosomal complex
4.39 2.94e-05 GO:0032993 protein-DNA complex
4.04 2.35e-04 GO:0071013 catalytic step 2 spliceosome
5.05 3.31e-04 GO:0000786 nucleosome
4.51 5.55e-04 GO:0034708 methyltransferase complex
4.51 5.55e-04 GO:0035097 histone methyltransferase complex
2.18 5.97e-04 GO:0005730 nucleolus
3.10 7.19e-04 GO:0000775 chromosome, centromeric region
3.76 1.38e-03 GO:0016585 chromatin remodeling complex
3.12 3.25e-03 GO:0044445 cytosolic part
4.45 8.31e-03 GO:0022626 cytosolic ribosome
8.78 8.84e-03 GO:0016581 NuRD complex
5.35 9.44e-03 GO:0008287 protein serine/threonine phosphatase complex
15.21 1.24e-02 GO:0005833 hemoglobin complex
1.79 1.24e-02 GO:0015630 microtubule cytoskeleton
1.21 1.35e-02 GO:0044444 cytoplasmic part
2.36 1.51e-02 GO:0000785 chromatin
3.87 1.61e-02 GO:0000502 proteasome complex
4.89 2.06e-02 GO:0015934 large ribosomal subunit
4.50 4.13e-02 GO:0000118 histone deacetylase complex

Gene overrepresentation in function category:

enrichment p-value GO term description
2.19 2.19e-37 GO:0003676 nucleic acid binding
3.13 2.85e-25 GO:0003723 RNA binding
1.28 9.07e-19 GO:0005488 binding
1.98 2.05e-16 GO:0003677 DNA binding
1.33 1.97e-08 GO:0005515 protein binding
4.39 2.58e-08 GO:0003735 structural constituent of ribosome
1.99 8.06e-08 GO:0030528 transcription regulator activity
3.19 8.93e-07 GO:0003682 chromatin binding
4.32 1.06e-05 GO:0003729 mRNA binding
4.09 2.84e-05 GO:0008135 translation factor activity, nucleic acid binding
1.48 1.22e-04 GO:0000166 nucleotide binding
2.40 1.80e-04 GO:0008134 transcription factor binding
2.22 2.33e-04 GO:0005198 structural molecule activity
1.59 4.06e-04 GO:0008270 zinc ion binding
1.89 4.11e-04 GO:0043565 sequence-specific DNA binding
2.50 1.19e-03 GO:0003712 transcription cofactor activity
2.49 1.31e-03 GO:0000989 transcription factor binding transcription factor activity
2.46 1.70e-03 GO:0000988 protein binding transcription factor activity
2.25 1.72e-03 GO:0016564 transcription repressor activity
1.74 3.36e-03 GO:0001071 nucleic acid binding transcription factor activity
1.74 3.36e-03 GO:0003700 sequence-specific DNA binding transcription factor activity
1.45 1.13e-02 GO:0046914 transition metal ion binding
2.39 2.32e-02 GO:0043566 structure-specific DNA binding
6.34 3.16e-02 GO:0003730 mRNA 3'-UTR binding
1.60 4.10e-02 GO:0019899 enzyme binding