avrg: SARS-CoV-2 Analysis Results (GEO series: GSE147507)

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
LHX2 Links Ensembl NCBI GeneCards UniProt	ENSG00000106689.6	LIM homeobox 2

Gene	Promoter	Pearson corr. coef.	P-value	Plot
LHX2	hg19_v2_chr9_+_126777676_126777700	-0.29	2.1e-01	Click!

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Gene overrepresentation in biological_process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.7	GO:1905150	regulation of voltage-gated sodium channel activity(GO:1905150)
0.1	0.2	GO:0070175	positive regulation of enamel mineralization(GO:0070175)
0.1	0.3	GO:0044501	modulation of signal transduction in other organism(GO:0044501) modulation by symbiont of host signal transduction pathway(GO:0052027) modulation of signal transduction in other organism involved in symbiotic interaction(GO:0052250) modulation by symbiont of host I-kappaB kinase/NF-kappaB cascade(GO:0085032)
0.0	0.1	GO:0060490	orthogonal dichotomous subdivision of terminal units involved in lung branching morphogenesis(GO:0060488) planar dichotomous subdivision of terminal units involved in lung branching morphogenesis(GO:0060489) lateral sprouting involved in lung morphogenesis(GO:0060490)
0.0	0.2	GO:0000354	cis assembly of pre-catalytic spliceosome(GO:0000354)
0.0	0.2	GO:0071874	cellular response to norepinephrine stimulus(GO:0071874)
0.0	0.3	GO:0038172	interleukin-33-mediated signaling pathway(GO:0038172)
0.0	0.1	GO:0035750	protein localization to myelin sheath abaxonal region(GO:0035750)
0.0	0.2	GO:0044210	'de novo' CTP biosynthetic process(GO:0044210)
0.0	0.2	GO:1903284	negative regulation of dopamine uptake involved in synaptic transmission(GO:0051585) norepinephrine uptake(GO:0051620) regulation of norepinephrine uptake(GO:0051621) negative regulation of norepinephrine uptake(GO:0051622) negative regulation of catecholamine uptake involved in synaptic transmission(GO:0051945) regulation of glutathione peroxidase activity(GO:1903282) positive regulation of glutathione peroxidase activity(GO:1903284) positive regulation of hydrogen peroxide catabolic process(GO:1903285) positive regulation of peroxidase activity(GO:2000470)
0.0	0.1	GO:0006667	sphinganine metabolic process(GO:0006667)
0.0	0.1	GO:2000639	regulation of SREBP signaling pathway(GO:2000638) negative regulation of SREBP signaling pathway(GO:2000639)
0.0	0.1	GO:0016062	adaptation of rhodopsin mediated signaling(GO:0016062) light adaption(GO:0036367)
0.0	0.1	GO:0050717	positive regulation of interleukin-1 alpha secretion(GO:0050717)
0.0	0.1	GO:0033133	positive regulation of glucokinase activity(GO:0033133) positive regulation of hexokinase activity(GO:1903301)
0.0	0.1	GO:0019482	beta-alanine metabolic process(GO:0019482)
0.0	0.6	GO:0010832	negative regulation of myotube differentiation(GO:0010832)
0.0	0.3	GO:0061302	smooth muscle cell-matrix adhesion(GO:0061302)
0.0	0.1	GO:0089700	protein kinase D signaling(GO:0089700)
0.0	0.1	GO:0042866	pyruvate biosynthetic process(GO:0042866)
0.0	0.2	GO:0097475	motor neuron migration(GO:0097475)
0.0	0.2	GO:1904352	positive regulation of protein catabolic process in the vacuole(GO:1904352)
0.0	0.2	GO:0009414	response to water deprivation(GO:0009414)
0.0	0.0	GO:0097198	histone H3-K36 trimethylation(GO:0097198)
0.0	0.1	GO:0097338	response to clozapine(GO:0097338)

Gene overrepresentation in cellular_component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0060187	cell pole(GO:0060187)
0.0	0.1	GO:1902912	pyruvate kinase complex(GO:1902912)
0.0	0.2	GO:1990812	growth cone filopodium(GO:1990812)
0.0	0.6	GO:0031233	intrinsic component of external side of plasma membrane(GO:0031233)
0.0	0.1	GO:1990452	Parkin-FBXW7-Cul1 ubiquitin ligase complex(GO:1990452)
0.0	0.6	GO:0030057	desmosome(GO:0030057)
0.0	0.1	GO:0032010	phagolysosome(GO:0032010)
0.0	0.1	GO:0072558	NLRP1 inflammasome complex(GO:0072558) protease inhibitor complex(GO:0097179)
0.0	0.7	GO:0005790	smooth endoplasmic reticulum(GO:0005790)

Gene overrepresentation in molecular_function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.6	GO:0034235	GPI anchor binding(GO:0034235)
0.0	0.1	GO:0002113	interleukin-33 binding(GO:0002113)
0.0	0.1	GO:0002114	interleukin-33 receptor activity(GO:0002114)
0.0	0.2	GO:0003883	CTP synthase activity(GO:0003883)
0.0	0.2	GO:0060961	phospholipase D inhibitor activity(GO:0060961)
0.0	0.1	GO:0004743	pyruvate kinase activity(GO:0004743)
0.0	0.3	GO:0038062	protein tyrosine kinase collagen receptor activity(GO:0038062)
0.0	0.1	GO:0033149	FFAT motif binding(GO:0033149)
0.0	0.1	GO:0008260	3-oxoacid CoA-transferase activity(GO:0008260)
0.0	0.1	GO:0047273	galactosylgalactosylglucosylceramide beta-D-acetylgalactosaminyltransferase activity(GO:0047273)
0.0	0.1	GO:0003873	6-phosphofructo-2-kinase activity(GO:0003873) fructose-2,6-bisphosphate 2-phosphatase activity(GO:0004331)
0.0	0.1	GO:0050115	myosin-light-chain-phosphatase activity(GO:0050115)
0.0	0.2	GO:0051425	PTB domain binding(GO:0051425)
0.0	0.1	GO:0050816	phosphothreonine binding(GO:0050816)
0.0	0.1	GO:0008336	gamma-butyrobetaine dioxygenase activity(GO:0008336)
0.0	0.2	GO:0042731	PH domain binding(GO:0042731)

Gene overrepresentation in C2:CP:REACTOME category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.6	REACTOME APOPTOTIC CLEAVAGE OF CELL ADHESION PROTEINS	Genes involved in Apoptotic cleavage of cell adhesion proteins
0.0	0.3	REACTOME THE NLRP3 INFLAMMASOME	Genes involved in The NLRP3 inflammasome