avrg: SARS-CoV-2 Analysis Results (GEO series: GSE147507)
ISMARA - Integrated System for Motif Actitivity Response Analysis is a free online tool that recognizes most important transcription factors that are changing their activity in a set of samples.
Sample | Condition |
---|---|
3-9-mock1-13_S20 | Mock_treated_A549_cells_IAV_control |
3-9-mock2-14_S1 | Mock_treated_A549_cells_IAV_control |
3-9-wt1-15_S2 | IAV_infected_A549_cells |
3-9-wt2-16_S16 | IAV_infected_A549_cells |
CoV002-CoV2-1-indexG4_S4 | SARS-CoV-2_infected_A549_cells |
CoV002-CoV2-2-indexG5_S5 | SARS-CoV-2_infected_A549_cells |
CoV002-CoV2-3-indexG6_S6 | SARS-CoV-2_infected_A549_cells |
CoV002-mock1-indexG1_S1 | Mock_treated_A549_cells_SC2_control |
CoV002-mock2-indexG2_S2 | Mock_treated_A549_cells_SC2_control |
CoV002-mock3-indexG3_S3 | Mock_treated_A549_cells_SC2_control |
SARS004-CoV2-1_S4 | SARS-CoV-2_infected_NHBE_cells |
SARS004-CoV2-2_S5 | SARS-CoV-2_infected_NHBE_cells |
SARS004-CoV2-3_S6 | SARS-CoV-2_infected_NHBE_cells |
SARS004-mock-1_S1 | Mock_treated_NHBE_cells |
SARS004-mock-2_S2 | Mock_treated_NHBE_cells |
SARS004-mock-3_S3 | Mock_treated_NHBE_cells |
svRNA184-mock-1-indexF1_S13 | Mock_treated_A549_cells_RSV_control |
svRNA184-mock-3-indexF3_S15 | Mock_treated_A549_cells_RSV_control |
svRNA184-RSV-1-indexF4_S16 | RSV_infected_A549_cells |
svRNA184-RSV-3-indexH9_S18 | RSV_infected_A549_cells |
Motif name | Z-value | Associated genes | Profile | Logo |
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ZEB1 | 14.44 |
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YBX1_FOS_NFYC_NFYA_NFYB_CEBPZ | 10.98 |
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ZNF711_TFAP2A_TFAP2D | 10.24 |
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HNF1A_HNF1B | 8.91 |
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E2F7_E2F1 | 8.68 |
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E2F2_E2F5 | 8.58 |
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NRF1 | 8.17 |
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TBP | 8.00 |
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KLF16_SP2 | 7.55 |
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IRF2_STAT2_IRF8_IRF1 | 7.52 |
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SP4_PML | 6.61 |
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TFDP1 | 6.55 |
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TP63 | 6.51 |
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KLF1 | 6.35 |
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MXI1_MYC_MYCN | 6.30 |
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FOXM1_TBL1XR1 | 6.17 |
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FOSL1 | 5.92 |
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PITX1 | 5.77 |
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ESRRA_ESR2 | 5.49 |
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TAF1 | 5.36 |
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SP1 | 5.36 |
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ZBTB33_CHD2 | 5.25 |
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PLAGL1 | 5.12 |
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ZNF143 | 4.97 |
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SOX3_SOX2 | 4.87 |
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WRNIP1 | 4.80 |
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RFX3_RFX2 | 4.61 |
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MYF6 | 4.58 |
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ZNF263 | 4.44 |
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MYB | 4.37 |
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TEAD3_TEAD1 | 4.35 |
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E2F3 | 4.29 |
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NFIX_NFIB | 4.19 |
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BACH1_NFE2_NFE2L2 | 4.19 |
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TFAP2B | 4.19 |
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ELK4_ETV5_ELK1_ELK3_ELF4 | 4.15 |
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PBX3 | 4.13 |
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BARHL1 | 4.09 |
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SMAD1 | 4.00 |
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ELF3_EHF | 3.91 |
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YY1_YY2 | 3.87 |
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BPTF | 3.85 |
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SP3 | 3.79 |
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CTCF_CTCFL | 3.78 |
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KLF8 | 3.75 |
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MEIS2 | 3.75 |
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CXXC1 | 3.74 |
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ZNF148 | 3.71 |
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FLI1 | 3.70 |
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E2F6 | 3.70 |
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RFX7_RFX4_RFX1 | 3.70 |
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HOXB4_LHX9 | 3.67 |
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CEBPA | 3.63 |
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PAX5 | 3.62 |
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TFAP2C | 3.57 |
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GRHL1 | 3.55 |
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E2F4 | 3.51 |
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ELF2_GABPA_ELF5 | 3.50 |
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CREB1 | 3.44 |
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EBF1 | 3.44 |
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RREB1 | 3.44 |
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NFIA | 3.40 |
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JDP2 | 3.39 |
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GATA3 | 3.35 |
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GMEB2 | 3.33 |
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GLIS2 | 3.31 |
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ZNF384 | 3.30 |
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PATZ1_KLF4 | 3.29 |
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REST | 3.27 |
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GLI3 | 3.22 |
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HNF4A | 3.16 |
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MYBL2 | 3.13 |
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AGCACCA | 3.12 |
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IRF9 | 3.11 |
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EGR1_EGR4 | 3.09 |
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HIC2 | 3.08 |
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SOX13_SOX12 | 3.06 |
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RARA | 3.04 |
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GAGGUAG | 3.00 |
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HOXC10_HOXD13 | 2.97 |
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MECP2 | 2.93 |
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SMAD4 | 2.90 |
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XBP1 | 2.89 |
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SIN3A_CHD1 | 2.84 |
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SRF | 2.83 |
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WT1_MTF1_ZBTB7B | 2.79 |
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ZFX | 2.78 |
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STAT1_STAT3_BCL6 | 2.78 |
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KLF6 | 2.77 |
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TLX2 | 2.75 |
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ERG | 2.75 |
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TFAP4_MSC | 2.75 |
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NR3C1 | 2.73 |
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ARNT | 2.73 |
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SOX10_SOX15 | 2.66 |
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TFCP2L1 | 2.65 |
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ID4_TCF4_SNAI2 | 2.65 |
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GCM2 | 2.64 |
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NFE2L1 | 2.63 |
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MYBL1 | 2.61 |
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MAFB | 2.61 |
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POU3F2 | 2.58 |
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MAZ_ZNF281_GTF2F1 | 2.56 |
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CUX1 | 2.55 |
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TCF7L2 | 2.54 |
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SPIB | 2.54 |
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HOXB3 | 2.51 |
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DPRX | 2.51 |
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IRF6_IRF4_IRF5 | 2.51 |
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EPAS1_BCL3 | 2.50 |
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BATF | 2.49 |
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SP100 | 2.49 |
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TAL1 | 2.48 |
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ZBTB6 | 2.47 |
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CLOCK | 2.47 |
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MEF2D_MEF2A | 2.47 |
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BARHL2 | 2.43 |
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HES1 | 2.42 |
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FOSL2_SMARCC1 | 2.41 |
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IRF3 | 2.41 |
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RUNX1_RUNX2 | 2.41 |
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TCF3_MYOG | 2.38 |
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KLF14_SP8 | 2.36 |
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E2F8 | 2.33 |
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IKZF1 | 2.32 |
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RUNX3_BCL11A | 2.32 |
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NR2F1 | 2.31 |
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VDR | 2.29 |
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ZNF740_ZNF219 | 2.28 |
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PITX3 | 2.26 |
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NFKB1 | 2.25 |
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ESR1 | 2.24 |
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SPDEF | 2.24 |
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AAAGUGC | 2.24 |
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TLX1_NFIC | 2.22 |
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ZNF524 | 2.21 |
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NKX1-2_RAX | 2.17 |
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RCOR1_MTA3 | 2.17 |
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MLX_USF2_USF1_PAX2 | 2.17 |
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NR1H2 | 2.16 |
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IKZF2 | 2.15 |
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EZH2 | 2.14 |
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CCCUGAG | 2.13 |
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HMGA1 | 2.13 |
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GLI2 | 2.12 |
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CUX2 | 2.12 |
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TEAD4 | 2.11 |
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NKX2-2 | 2.09 |
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ZBTB12 | 2.09 |
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HOXA6 | 2.08 |
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HOXC9 | 2.04 |
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NR4A3 | 2.03 |
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UAAGGCA | 2.02 |
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TP73 | 2.01 |
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EBF3 | 2.00 |
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POU2F2_POU3F1 | 1.99 |
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CEBPG | 1.99 |
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SOX9 | 1.99 |
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RHOXF1 | 1.98 |
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TCF12_ASCL2 | 1.98 |
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FOXJ2 | 1.97 |
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HOXA1 | 1.94 |
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HSFY2 | 1.94 |
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TWIST1_SNAI1 | 1.93 |
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HOXB6_PRRX2 | 1.93 |
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AAUACUG | 1.93 |
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FOXD1_FOXO1_FOXO6_FOXG1_FOXP1 | 1.92 |
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SPI1 | 1.91 |
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SIX5_SMARCC2_HCFC1 | 1.91 |
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HIVEP1 | 1.90 |
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GATA2 | 1.90 |
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ACAUUCA | 1.89 |
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ZBTB16 | 1.89 |
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FOXA1 | 1.89 |
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CEBPE_CEBPD | 1.88 |
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LMX1B_MNX1_RAX2 | 1.88 |
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ETV6 | 1.87 |
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GUAAACA | 1.86 |
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HOXC8 | 1.85 |
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CPEB1 | 1.84 |
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IRX3 | 1.84 |
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MYOD1 | 1.84 |
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KLF12 | 1.83 |
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FOXN1 | 1.83 |
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CENPB | 1.82 |
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POU4F1_POU4F3 | 1.81 |
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FOXL1 | 1.80 |
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GGAAUGU | 1.80 |
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AACACUG | 1.79 |
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GMEB1 | 1.78 |
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NOTO_VSX2_DLX2_DLX6_NKX6-1 | 1.78 |
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HIC1 | 1.77 |
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JUND | 1.77 |
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ZNF784 | 1.77 |
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RELA | 1.74 |
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POU2F1 | 1.73 |
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NFKB2 | 1.73 |
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UAUUGCU | 1.71 |
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NR1I2 | 1.71 |
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AGUGGUU | 1.71 |
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SOX17 | 1.70 |
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CUUUGGU | 1.69 |
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NHLH1 | 1.66 |
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NR5A2 | 1.66 |
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LEF1 | 1.65 |
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STAT5B | 1.65 |
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ETV1_ERF_FEV_ELF1 | 1.64 |
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ZBTB14 | 1.64 |
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UACAGUA | 1.64 |
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BHLHE40 | 1.63 |
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ZBTB18 | 1.62 |
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HOMEZ | 1.61 |
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SOX6 | 1.60 |
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DUXA | 1.59 |
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ETS1 | 1.59 |
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GGCUCAG | 1.59 |
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RXRG | 1.58 |
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ATF5 | 1.57 |
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AGUGCUU | 1.57 |
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MBD2 | 1.57 |
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ZIC3_ZIC4 | 1.56 |
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NKX2-1 | 1.54 |
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VAX1_GSX2 | 1.53 |
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EMX2 | 1.53 |
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PPARG | 1.53 |
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NR2E3 | 1.52 |
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DDIT3 | 1.51 |
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ATF6 | 1.50 |
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ACAGUAC | 1.50 |
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NFATC1 | 1.50 |
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UAGUGUU | 1.50 |
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GUGCAAA | 1.50 |
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STAT4 | 1.48 |
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AGGUAGU | 1.47 |
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FOXQ1 | 1.47 |
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UGCAUAG | 1.46 |
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HOXC12_HOXD12 | 1.44 |
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AGCAGCA | 1.44 |
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CBFB | 1.44 |
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DLX4_HOXD8 | 1.43 |
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SMAD3 | 1.43 |
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MLXIPL | 1.42 |
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HNF4G | 1.42 |
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ATF4 | 1.42 |
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HINFP | 1.42 |
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ZIC1 | 1.41 |
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CREB5_CREM_JUNB | 1.41 |
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AGUGCAA | 1.41 |
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KLF13 | 1.41 |
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HOXB2_UNCX_HOXD3 | 1.41 |
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CDX2 | 1.40 |
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PRDM14 | 1.40 |
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ZKSCAN1 | 1.40 |
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SREBF2 | 1.38 |
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GATA5 | 1.38 |
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PAX1_PAX9 | 1.38 |
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MEIS1 | 1.38 |
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GGCAGUG | 1.38 |
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