avrg: Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
PAX5 | hg38_v1_chr9_-_37034261_37034273, hg38_v1_chr9_-_37025733_37025753 | -0.24 | 5.7e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr1_+_159204860 Show fit | 0.90 |
ENST00000368122.4
ENST00000368121.6 |
atypical chemokine receptor 1 (Duffy blood group) |
|
chr1_+_171557845 Show fit | 0.80 |
ENST00000644916.1
|
proline rich coiled-coil 2C |
|
chr12_-_91146195 Show fit | 0.79 |
ENST00000548218.1
|
decorin |
|
chr11_-_118679637 Show fit | 0.75 |
ENST00000264029.9
ENST00000397925.2 |
trehalase |
|
chr15_+_32718476 Show fit | 0.73 |
ENST00000652365.1
|
gremlin 1, DAN family BMP antagonist |
|
chr10_-_77637902 Show fit | 0.62 |
ENST00000286627.10
ENST00000639486.1 ENST00000640523.1 |
potassium calcium-activated channel subfamily M alpha 1 |
|
chr12_-_91180365 Show fit | 0.61 |
ENST00000547937.5
|
decorin |
|
chr3_+_111071773 Show fit | 0.61 |
ENST00000485303.6
|
nectin cell adhesion molecule 3 |
|
chr1_+_180196536 Show fit | 0.57 |
ENST00000443059.1
|
quiescin sulfhydryl oxidase 1 |
|
chr2_-_224947030 Show fit | 0.55 |
ENST00000409592.7
|
dedicator of cytokinesis 10 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 3.2 | GO:0034465 | response to carbon monoxide(GO:0034465) |
0.1 | 1.7 | GO:1900747 | negative regulation of vascular endothelial growth factor signaling pathway(GO:1900747) |
0.2 | 1.3 | GO:2000230 | negative regulation of pancreatic stellate cell proliferation(GO:2000230) |
0.1 | 1.3 | GO:2000680 | rubidium ion transport(GO:0035826) regulation of rubidium ion transport(GO:2000680) |
0.1 | 1.2 | GO:0097324 | melanocyte migration(GO:0097324) |
0.0 | 1.0 | GO:0035987 | endodermal cell differentiation(GO:0035987) |
0.0 | 1.0 | GO:0010501 | RNA secondary structure unwinding(GO:0010501) |
0.1 | 0.9 | GO:0089700 | protein kinase D signaling(GO:0089700) |
0.1 | 0.9 | GO:0001554 | luteolysis(GO:0001554) |
0.1 | 0.9 | GO:0032060 | bleb assembly(GO:0032060) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 5.5 | GO:0005901 | caveola(GO:0005901) |
0.2 | 2.8 | GO:0098647 | collagen type VI trimer(GO:0005589) collagen beaded filament(GO:0098647) |
0.0 | 2.2 | GO:0030173 | integral component of Golgi membrane(GO:0030173) |
0.0 | 1.7 | GO:0030176 | integral component of endoplasmic reticulum membrane(GO:0030176) |
0.1 | 1.5 | GO:0097487 | multivesicular body, internal vesicle(GO:0097487) |
0.0 | 1.4 | GO:0046658 | anchored component of plasma membrane(GO:0046658) |
0.0 | 1.4 | GO:0005796 | Golgi lumen(GO:0005796) |
0.0 | 1.3 | GO:0043218 | compact myelin(GO:0043218) |
0.0 | 1.2 | GO:0005811 | lipid particle(GO:0005811) |
0.1 | 0.9 | GO:0044615 | nuclear pore nuclear basket(GO:0044615) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 3.2 | GO:0060072 | large conductance calcium-activated potassium channel activity(GO:0060072) |
0.0 | 2.9 | GO:0005518 | collagen binding(GO:0005518) |
0.0 | 1.8 | GO:0004222 | metalloendopeptidase activity(GO:0004222) |
0.0 | 1.5 | GO:0015485 | cholesterol binding(GO:0015485) |
0.0 | 1.5 | GO:0008186 | RNA-dependent ATPase activity(GO:0008186) |
0.0 | 1.5 | GO:0004386 | helicase activity(GO:0004386) |
0.0 | 1.4 | GO:0001618 | virus receptor activity(GO:0001618) |
0.1 | 1.3 | GO:0050692 | DBD domain binding(GO:0050692) |
0.0 | 1.1 | GO:0070412 | R-SMAD binding(GO:0070412) |
0.0 | 1.0 | GO:0046966 | thyroid hormone receptor binding(GO:0046966) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.1 | NABA PROTEOGLYCANS | Genes encoding proteoglycans |
0.0 | 1.9 | PID RB 1PATHWAY | Regulation of retinoblastoma protein |
0.0 | 1.5 | NABA BASEMENT MEMBRANES | Genes encoding structural components of basement membranes |
0.0 | 1.4 | PID ARF6 TRAFFICKING PATHWAY | Arf6 trafficking events |
0.0 | 1.4 | PID CDC42 REG PATHWAY | Regulation of CDC42 activity |
0.0 | 1.3 | PID BMP PATHWAY | BMP receptor signaling |
0.0 | 1.2 | PID FANCONI PATHWAY | Fanconi anemia pathway |
0.0 | 1.2 | PID AURORA B PATHWAY | Aurora B signaling |
0.0 | 1.1 | PID INTEGRIN2 PATHWAY | Beta2 integrin cell surface interactions |
0.0 | 1.0 | PID ATR PATHWAY | ATR signaling pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 1.9 | REACTOME CS DS DEGRADATION | Genes involved in CS/DS degradation |
0.0 | 1.8 | REACTOME TRANSPORT OF RIBONUCLEOPROTEINS INTO THE HOST NUCLEUS | Genes involved in Transport of Ribonucleoproteins into the Host Nucleus |
0.0 | 1.8 | REACTOME COLLAGEN FORMATION | Genes involved in Collagen formation |
0.0 | 1.8 | REACTOME PPARA ACTIVATES GENE EXPRESSION | Genes involved in PPARA Activates Gene Expression |
0.0 | 1.6 | REACTOME CHOLESTEROL BIOSYNTHESIS | Genes involved in Cholesterol biosynthesis |
0.0 | 1.5 | REACTOME SPHINGOLIPID DE NOVO BIOSYNTHESIS | Genes involved in Sphingolipid de novo biosynthesis |
0.0 | 1.4 | REACTOME POST TRANSLATIONAL MODIFICATION SYNTHESIS OF GPI ANCHORED PROTEINS | Genes involved in Post-translational modification: synthesis of GPI-anchored proteins |
0.0 | 1.4 | REACTOME MITOTIC PROMETAPHASE | Genes involved in Mitotic Prometaphase |
0.0 | 1.0 | REACTOME RORA ACTIVATES CIRCADIAN EXPRESSION | Genes involved in RORA Activates Circadian Expression |
0.0 | 0.9 | REACTOME HYALURONAN UPTAKE AND DEGRADATION | Genes involved in Hyaluronan uptake and degradation |