avrg: young vs old, Illumina Body Map 2 (GSE30611)
ISMARA - Integrated System for Motif Actitivity Response Analysis is a free online tool that recognizes most important transcription factors that are changing their activity in a set of samples.
Sample | Condition |
---|---|
adipose.rep01 | old |
adipose.rep02 | old |
adrenal.rep01 | old |
adrenal.rep02 | old |
blood.rep01 | old |
blood.rep02 | old |
brain.rep01 | old |
brain.rep02 | old |
breast.rep01 | young |
breast.rep02 | young |
colon.rep01 | old |
colon.rep02 | old |
heart.rep01 | old |
heart.rep02 | old |
kidney.rep01 | old |
kidney.rep02 | old |
liver.rep01 | young |
liver.rep02 | young |
lung.rep01 | old |
lung.rep02 | old |
lymph_node.rep01 | old |
lymph_node.rep02 | old |
ovary.rep01 | young |
ovary.rep02 | young |
prostate.rep01 | old |
prostate.rep02 | old |
skeletal_muscle.rep01 | old |
skeletal_muscle.rep02 | old |
testis.rep01 | young |
testis.rep02 | young |
thyroid.rep01 | old |
thyroid.rep02 | old |
In order to use ARMADA for infering putative regulatory networks from timecourse data, please set for every sample a timepoint, gap from previous timepoint and replicate. If you have only one replicate per sample you can leave replicate field unset.