Motif ID: Hoxa1

Z-value: 0.849


Transcription factors associated with Hoxa1:

Gene SymbolEntrez IDGene Name
Hoxa1 ENSMUSG00000029844.9 Hoxa1



Activity profile for motif Hoxa1.

activity profile for motif Hoxa1


Sorted Z-values histogram for motif Hoxa1

Sorted Z-values for motif Hoxa1



Network of associatons between targets according to the STRING database.



First level regulatory network of Hoxa1

PNG image of the network

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Top targets:


Showing 1 to 20 of 86 entries
PromoterScoreRefseqGene SymbolGene Name
chr10_+_81628702 3.448 ENSMUST00000129622.1
 Ankrd24
ankyrin repeat domain 24
chr4_-_143299498 3.261 ENSMUST00000030317.7
 Pdpn
podoplanin
chr9_+_15239045 2.675 ENSMUST00000034413.6
 Vstm5
V-set and transmembrane domain containing 5
chr10_+_81628570 2.185 ENSMUST00000153573.1
ENSMUST00000119336.1
 Ankrd24

ankyrin repeat domain 24

chr2_+_158375638 2.021 ENSMUST00000109488.1
 Snhg11
small nucleolar RNA host gene 11
chr17_-_25081138 1.955 ENSMUST00000024984.6
 Tmem204
transmembrane protein 204
chr6_-_136875794 1.476 ENSMUST00000032342.1
 Mgp
matrix Gla protein
chr14_-_103844173 1.429 ENSMUST00000022718.3
 Ednrb
endothelin receptor type B
chr8_-_11312731 1.403 ENSMUST00000033898.9
 Col4a1
collagen, type IV, alpha 1
chr16_+_38902305 1.396 ENSMUST00000023478.7
 Igsf11
immunoglobulin superfamily, member 11
chrX_+_56454871 1.328 ENSMUST00000039374.2
ENSMUST00000101553.2
 Ddx26b

DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B

chr13_+_31806627 1.028 ENSMUST00000062292.2
 Foxc1
forkhead box C1
chr13_-_12340723 1.018 ENSMUST00000168193.1
ENSMUST00000110616.1
ENSMUST00000064204.7
 Actn2


actinin alpha 2


chr9_+_65890237 0.905 ENSMUST00000045802.6
 2810417H13Rik
RIKEN cDNA 2810417H13 gene
chr13_-_60177357 0.818 ENSMUST00000065086.4
 Gas1
growth arrest specific 1
chr4_-_143299463 0.793 ENSMUST00000119654.1
 Pdpn
podoplanin
chr10_+_79988584 0.768 ENSMUST00000004784.4
ENSMUST00000105374.1
 Cnn2

calponin 2

chr2_+_36230426 0.716 ENSMUST00000062069.5
 Ptgs1
prostaglandin-endoperoxide synthase 1
chr10_+_67185730 0.692 ENSMUST00000173689.1
 Jmjd1c
jumonji domain containing 1C
chr3_+_114030532 0.595 ENSMUST00000123619.1
ENSMUST00000092155.5
 Col11a1

collagen, type XI, alpha 1


Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Showing 1 to 20 of 28 entries
Log-likelihood per target Total log-likelihoodTermDescription
0.4 4.6 GO:0061032 visceral serous pericardium development(GO:0061032)
0.1 2.0 GO:0030947 regulation of vascular endothelial growth factor receptor signaling pathway(GO:0030947)
0.0 1.5 GO:0030500 regulation of bone mineralization(GO:0030500)
0.5 1.4 GO:0014826 vein smooth muscle contraction(GO:0014826)
0.2 1.4 GO:0061304 retinal blood vessel morphogenesis(GO:0061304)
0.3 1.0 GO:0003278 apoptotic process involved in heart morphogenesis(GO:0003278)
0.3 1.0 GO:0051695 actin filament uncapping(GO:0051695)
0.1 0.9 GO:0019985 translesion synthesis(GO:0019985)
0.2 0.8 GO:0046864 retinol transport(GO:0034633) isoprenoid transport(GO:0046864) terpenoid transport(GO:0046865) alveolar primary septum development(GO:0061143)
0.1 0.8 GO:0042473 outer ear morphogenesis(GO:0042473)
0.2 0.7 GO:0035633 maintenance of blood-brain barrier(GO:0035633)
0.1 0.7 GO:0030718 germ-line stem cell population maintenance(GO:0030718)
0.1 0.6 GO:0035989 tendon development(GO:0035989)
0.2 0.5 GO:1903225 negative regulation of endodermal cell differentiation(GO:1903225)
0.0 0.5 GO:0050765 negative regulation of phagocytosis(GO:0050765)
0.0 0.5 GO:0018345 protein palmitoylation(GO:0018345)
0.0 0.4 GO:0002361 CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation(GO:0002361)
0.1 0.3 GO:0035622 intrahepatic bile duct development(GO:0035622) cholangiocyte proliferation(GO:1990705)
0.1 0.3 GO:0097116 gephyrin clustering involved in postsynaptic density assembly(GO:0097116)
0.0 0.3 GO:0033089 positive regulation of T cell differentiation in thymus(GO:0033089) positive regulation of thymocyte aggregation(GO:2000400)

Gene overrepresentation in cellular_component category:

Showing 1 to 10 of 10 entries
Log-likelihood per target Total log-likelihoodTermDescription
0.0 3.9 GO:0030175 filopodium(GO:0030175)
0.3 1.4 GO:0005587 collagen type IV trimer(GO:0005587) network-forming collagen trimer(GO:0098642) collagen network(GO:0098645) basement membrane collagen trimer(GO:0098651)
0.0 1.1 GO:0046658 anchored component of plasma membrane(GO:0046658)
0.0 1.0 GO:0005865 striated muscle thin filament(GO:0005865)
0.0 1.0 GO:0005720 nuclear heterochromatin(GO:0005720)
0.0 0.7 GO:0001750 photoreceptor outer segment(GO:0001750)
0.1 0.6 GO:0098643 fibrillar collagen trimer(GO:0005583) banded collagen fibril(GO:0098643)
0.2 0.5 GO:0034673 inhibin-betaglycan-ActRII complex(GO:0034673)
0.2 0.5 GO:0005588 collagen type V trimer(GO:0005588)
0.0 0.2 GO:0097542 ciliary tip(GO:0097542)

Gene overrepresentation in molecular_function category:

Showing 1 to 19 of 19 entries
Log-likelihood per target Total log-likelihoodTermDescription
0.4 4.1 GO:0008517 folic acid transporter activity(GO:0008517) water channel activity(GO:0015250)
0.1 3.9 GO:0005201 extracellular matrix structural constituent(GO:0005201)
0.5 1.4 GO:0004962 endothelin receptor activity(GO:0004962)
0.1 1.0 GO:0031432 thyroid hormone receptor coactivator activity(GO:0030375) titin binding(GO:0031432)
0.1 1.0 GO:0008301 DNA binding, bending(GO:0008301)
0.0 0.8 GO:0051183 vitamin transporter activity(GO:0051183)
0.0 0.7 GO:0004601 peroxidase activity(GO:0004601)
0.0 0.7 GO:0018602 sulfonate dioxygenase activity(GO:0000907) 2,4-dichlorophenoxyacetate alpha-ketoglutarate dioxygenase activity(GO:0018602) hypophosphite dioxygenase activity(GO:0034792) gibberellin 2-beta-dioxygenase activity(GO:0045543) C-19 gibberellin 2-beta-dioxygenase activity(GO:0052634) C-20 gibberellin 2-beta-dioxygenase activity(GO:0052635)
0.1 0.5 GO:0005114 type II transforming growth factor beta receptor binding(GO:0005114)
0.0 0.5 GO:0019706 protein-cysteine S-palmitoyltransferase activity(GO:0019706)
0.0 0.4 GO:0004623 phospholipase A2 activity(GO:0004623)
0.0 0.3 GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity(GO:0003854)
0.0 0.3 GO:0097109 neuroligin family protein binding(GO:0097109)
0.0 0.3 GO:0030676 Rac guanyl-nucleotide exchange factor activity(GO:0030676)
0.0 0.2 GO:0003680 AT DNA binding(GO:0003680)
0.0 0.1 GO:0016167 glial cell-derived neurotrophic factor receptor activity(GO:0016167)
0.0 0.1 GO:0004096 catalase activity(GO:0004096)
0.0 0.1 GO:0004658 propionyl-CoA carboxylase activity(GO:0004658)
0.0 0.1 GO:0047760 butyrate-CoA ligase activity(GO:0047760)