Motif ID: Hoxa13

Z-value: 0.872


Transcription factors associated with Hoxa13:

Gene SymbolEntrez IDGene Name
Hoxa13 ENSMUSG00000038203.12 Hoxa13



Activity profile for motif Hoxa13.

activity profile for motif Hoxa13


Sorted Z-values histogram for motif Hoxa13

Sorted Z-values for motif Hoxa13



Network of associatons between targets according to the STRING database.



First level regulatory network of Hoxa13

PNG image of the network

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Top targets:


Showing 1 to 20 of 200 entries
PromoterScoreRefseqGene SymbolGene Name
chrY_-_1286563 6.372 ENSMUST00000091190.5
 Ddx3y
DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked
chrY_+_897782 3.327 ENSMUST00000055032.7
 Kdm5d
lysine (K)-specific demethylase 5D
chr15_+_3270767 2.153 ENSMUST00000082424.4
ENSMUST00000159158.1
ENSMUST00000159216.1
ENSMUST00000160311.1
 Sepp1



selenoprotein P, plasma, 1



chr10_-_116972609 1.854 ENSMUST00000092165.4
 Gm10271
predicted gene 10271
chr13_-_23622502 1.507 ENSMUST00000062045.2
 Hist1h1e
histone cluster 1, H1e
chr16_+_91225550 1.407 ENSMUST00000035608.8
 Olig2
oligodendrocyte transcription factor 2
chr16_-_31314804 1.351 ENSMUST00000115230.1
ENSMUST00000130560.1
 Apod

apolipoprotein D

chrX_-_109013389 1.098 ENSMUST00000033597.8
 Hmgn5
high-mobility group nucleosome binding domain 5
chrM_+_3906 1.083 ENSMUST00000082396.1
 mt-Nd2
mitochondrially encoded NADH dehydrogenase 2
chr6_-_12749193 1.060 ENSMUST00000046121.6
ENSMUST00000172356.1
 Thsd7a

thrombospondin, type I, domain containing 7A

chr6_+_79818031 1.034 ENSMUST00000179797.1
 Gm20594
predicted gene, 20594
chr3_+_98280427 1.015 ENSMUST00000090746.2
ENSMUST00000120541.1
 Hmgcs2

3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2

chr18_+_33464163 0.992 ENSMUST00000097634.3
 Gm10549
predicted gene 10549
chr13_+_94083490 0.970 ENSMUST00000156071.1
 Lhfpl2
lipoma HMGIC fusion partner-like 2
chr6_+_125215551 0.937 ENSMUST00000032487.7
ENSMUST00000100942.2
ENSMUST00000063588.8
 Vamp1


vesicle-associated membrane protein 1


chr16_-_18811972 0.877 ENSMUST00000000028.7
ENSMUST00000115585.1
 Cdc45

cell division cycle 45

chr4_+_144893127 0.838 ENSMUST00000142808.1
 Dhrs3
dehydrogenase/reductase (SDR family) member 3
chr13_-_23430826 0.820 ENSMUST00000153753.1
ENSMUST00000141543.1
 C230035I16Rik

RIKEN cDNA C230035I16 gene

chr1_-_173942445 0.801 ENSMUST00000042228.8
ENSMUST00000081216.5
ENSMUST00000129829.1
ENSMUST00000123708.1
ENSMUST00000111210.2
 Ifi203



Mndal
interferon activated gene 203



myeloid nuclear differentiation antigen like
chr3_-_80802789 0.786 ENSMUST00000107745.1
ENSMUST00000075316.4
 Gria2

glutamate receptor, ionotropic, AMPA2 (alpha 2)


Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Showing 1 to 20 of 109 entries
Log-likelihood per target Total log-likelihoodTermDescription
0.1 6.2 GO:0010501 RNA secondary structure unwinding(GO:0010501)
0.7 3.3 GO:0002457 T cell antigen processing and presentation(GO:0002457)
0.3 2.2 GO:0001887 selenium compound metabolic process(GO:0001887)
0.2 1.5 GO:0016584 nucleosome positioning(GO:0016584)
0.5 1.4 GO:0021529 spinal cord oligodendrocyte cell differentiation(GO:0021529) spinal cord oligodendrocyte cell fate specification(GO:0021530)
0.5 1.4 GO:2000097 regulation of smooth muscle cell-matrix adhesion(GO:2000097) negative regulation of lymphocyte migration(GO:2000402)
0.0 1.1 GO:0070303 negative regulation of stress-activated MAPK cascade(GO:0032873) negative regulation of stress-activated protein kinase signaling cascade(GO:0070303)
0.0 1.1 GO:0006749 glutathione metabolic process(GO:0006749)
0.1 1.0 GO:0006120 mitochondrial electron transport, NADH to ubiquinone(GO:0006120)
0.0 1.0 GO:0008299 isoprenoid biosynthetic process(GO:0008299)
0.3 0.9 GO:0036388 pre-replicative complex assembly involved in nuclear cell cycle DNA replication(GO:0006267) pre-replicative complex assembly(GO:0036388) pre-replicative complex assembly involved in cell cycle DNA replication(GO:1902299)
0.1 0.9 GO:0035493 SNARE complex assembly(GO:0035493)
0.0 0.9 GO:0006493 protein O-linked glycosylation(GO:0006493)
0.3 0.8 GO:0070269 pyroptosis(GO:0070269)
0.1 0.8 GO:0042572 retinol metabolic process(GO:0042572)
0.0 0.8 GO:0035235 ionotropic glutamate receptor signaling pathway(GO:0035235)
0.0 0.8 GO:0046677 response to antibiotic(GO:0046677)
0.0 0.8 GO:0035458 cellular response to interferon-beta(GO:0035458)
0.0 0.8 GO:0022900 electron transport chain(GO:0022900)
0.2 0.7 GO:0008065 establishment of blood-nerve barrier(GO:0008065) regulation of skeletal muscle contraction by regulation of release of sequestered calcium ion(GO:0014809)

Gene overrepresentation in cellular_component category:

Showing 1 to 20 of 46 entries
Log-likelihood per target Total log-likelihoodTermDescription
0.0 5.0 GO:0036464 cytoplasmic ribonucleoprotein granule(GO:0036464)
0.0 2.4 GO:0070469 respiratory chain(GO:0070469)
0.0 1.6 GO:0000786 nucleosome(GO:0000786)
0.3 0.9 GO:0036387 nuclear pre-replicative complex(GO:0005656) pre-replicative complex(GO:0036387)
0.2 0.9 GO:0070820 tertiary granule(GO:0070820)
0.2 0.8 GO:0061702 inflammasome complex(GO:0061702)
0.1 0.8 GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)(GO:0000276)
0.0 0.8 GO:0032279 asymmetric synapse(GO:0032279)
0.1 0.7 GO:0000444 MIS12/MIND type complex(GO:0000444)
0.1 0.7 GO:0097197 tetraspanin-enriched microdomain(GO:0097197)
0.0 0.7 GO:0031527 filopodium membrane(GO:0031527)
0.1 0.6 GO:0032983 kainate selective glutamate receptor complex(GO:0032983)
0.1 0.6 GO:0097513 myosin II filament(GO:0097513)
0.1 0.6 GO:1990023 mitotic spindle midzone(GO:1990023)
0.0 0.6 GO:0034706 voltage-gated sodium channel complex(GO:0001518) sodium channel complex(GO:0034706)
0.0 0.6 GO:0034364 high-density lipoprotein particle(GO:0034364)
0.2 0.5 GO:0030868 smooth endoplasmic reticulum membrane(GO:0030868) smooth endoplasmic reticulum part(GO:0097425)
0.1 0.4 GO:0034673 inhibin-betaglycan-ActRII complex(GO:0034673)
0.1 0.4 GO:0005968 Rab-protein geranylgeranyltransferase complex(GO:0005968)
0.0 0.4 GO:0031616 spindle pole centrosome(GO:0031616)

Gene overrepresentation in molecular_function category:

Showing 1 to 20 of 87 entries
Log-likelihood per target Total log-likelihoodTermDescription
0.1 5.7 GO:0008186 ATP-dependent RNA helicase activity(GO:0004004) RNA-dependent ATPase activity(GO:0008186)
0.5 3.3 GO:0032453 histone demethylase activity (H3-K4 specific)(GO:0032453)
0.1 1.8 GO:0050136 NADH dehydrogenase (ubiquinone) activity(GO:0008137) NADH dehydrogenase (quinone) activity(GO:0050136)
0.2 1.4 GO:0015277 kainate selective glutamate receptor activity(GO:0015277)
0.1 1.4 GO:0008430 selenium binding(GO:0008430)
0.0 1.4 GO:0071837 HMG box domain binding(GO:0071837)
0.0 1.4 GO:0015485 cholesterol binding(GO:0015485)
0.2 1.0 GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer(GO:0046912)
0.0 1.0 GO:0033613 activating transcription factor binding(GO:0033613)
0.1 0.9 GO:0003688 DNA replication origin binding(GO:0003688)
0.1 0.8 GO:0052650 NADP-retinol dehydrogenase activity(GO:0052650)
0.2 0.7 GO:0016262 protein N-acetylglucosaminyltransferase activity(GO:0016262)
0.2 0.7 GO:0034714 type III transforming growth factor beta receptor binding(GO:0034714)
0.1 0.7 GO:0004499 N,N-dimethylaniline monooxygenase activity(GO:0004499)
0.1 0.7 GO:0035727 lysophosphatidic acid binding(GO:0035727) lysophosphatidic acid receptor activity(GO:0070915)
0.0 0.7 GO:0017166 vinculin binding(GO:0017166)
0.0 0.7 GO:0031402 sodium ion binding(GO:0031402)
0.2 0.6 GO:0001011 transcription factor activity, sequence-specific DNA binding, RNA polymerase recruiting(GO:0001011) transcription factor activity, TFIIB-class binding(GO:0001087)
0.1 0.6 GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity(GO:0003854)
0.1 0.6 GO:0015375 glycine:sodium symporter activity(GO:0015375)