Motif ID: Rarb

Z-value: 0.478


Transcription factors associated with Rarb:

Gene SymbolEntrez IDGene Name
Rarb ENSMUSG00000017491.8 Rarb

Activity-expression correlation:

Gene SymbolPromoterPearson corr. coef.P-valuePlot
Rarbmm10_v2_chr14_-_16575456_16575501-0.381.8e-01Click!


Activity profile for motif Rarb.

activity profile for motif Rarb


Sorted Z-values histogram for motif Rarb

Sorted Z-values for motif Rarb



Network of associatons between targets according to the STRING database.



First level regulatory network of Rarb

PNG image of the network

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Top targets:


Promoter Score Refseq Gene Symbol Gene Name
chr8_+_36489191 1.267 ENSMUST00000171777.1
 6430573F11Rik
RIKEN cDNA 6430573F11 gene
chr1_+_90203980 0.928 ENSMUST00000065587.4
ENSMUST00000159654.1
 Ackr3

atypical chemokine receptor 3

chr11_+_83409137 0.556 ENSMUST00000021022.3
 Rasl10b
RAS-like, family 10, member B
chr1_+_24177610 0.548 ENSMUST00000054588.8
 Col9a1
collagen, type IX, alpha 1
chr11_+_83409655 0.529 ENSMUST00000175848.1
ENSMUST00000108140.3
 Rasl10b

RAS-like, family 10, member B

chr7_-_116031047 0.516 ENSMUST00000106612.1
 Sox6
SRY-box containing gene 6
chr13_-_25270076 0.512 ENSMUST00000057866.6
 Nrsn1
neurensin 1
chr11_-_45944910 0.458 ENSMUST00000129820.1
 Lsm11
U7 snRNP-specific Sm-like protein LSM11
chr18_+_65582390 0.310 ENSMUST00000169679.1
ENSMUST00000183326.1
 Zfp532

zinc finger protein 532

chr2_+_30281043 0.310 ENSMUST00000143119.2
 RP23-395P6.9
RP23-395P6.9
chr5_+_92897981 0.279 ENSMUST00000113051.2
 Shroom3
shroom family member 3
chr3_-_52104891 0.256 ENSMUST00000121440.1
 Maml3
mastermind like 3 (Drosophila)
chr2_-_163417092 0.247 ENSMUST00000127038.1
 Oser1
oxidative stress responsive serine rich 1
chr16_+_38346986 0.236 ENSMUST00000050273.8
ENSMUST00000120495.1
ENSMUST00000119704.1
 Cox17

Gm21987
cytochrome c oxidase assembly protein 17

predicted gene 21987
chr10_+_43524080 0.227 ENSMUST00000057649.6
 Gm9803
predicted gene 9803
chr7_+_127904079 0.168 ENSMUST00000071056.7
 Bckdk
branched chain ketoacid dehydrogenase kinase
chr8_+_106683052 0.151 ENSMUST00000048359.4
 Tango6
transport and golgi organization 6
chr15_-_98662858 0.144 ENSMUST00000162384.1
ENSMUST00000003450.8
 Ddx23

DEAD (Asp-Glu-Ala-Asp) box polypeptide 23

chr7_+_108934405 0.100 ENSMUST00000033342.6
 Eif3f
eukaryotic translation initiation factor 3, subunit F
chr19_+_44992127 0.089 ENSMUST00000179305.1
 Sema4g
sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G
chr10_-_126901315 0.071 ENSMUST00000026504.5
ENSMUST00000168520.1
 Xrcc6bp1

XRCC6 binding protein 1

chr3_+_108186332 0.069 ENSMUST00000050909.6
ENSMUST00000106659.2
ENSMUST00000106656.1
ENSMUST00000106661.2
 Amigo1



adhesion molecule with Ig like domain 1



chr17_+_37045963 0.061 ENSMUST00000025338.9
 Gabbr1
gamma-aminobutyric acid (GABA) B receptor, 1
chr11_+_105178765 0.057 ENSMUST00000106939.2
 Tlk2
tousled-like kinase 2 (Arabidopsis)
chr9_+_56937462 0.051 ENSMUST00000034827.8
 Imp3
IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)
chr1_+_4807823 0.045 ENSMUST00000027036.4
ENSMUST00000119612.2
ENSMUST00000137887.1
ENSMUST00000115529.1
ENSMUST00000150971.1
 Lypla1




lysophospholipase 1





Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.5 GO:0006398 mRNA 3'-end processing by stem-loop binding and cleavage(GO:0006398)
0.0 0.5 GO:2000741 positive regulation of mesenchymal stem cell differentiation(GO:2000741)
0.0 0.9 GO:1902230 negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage(GO:1902230)
0.0 0.5 GO:0003417 growth plate cartilage development(GO:0003417)
0.0 0.7 GO:0001990 regulation of systemic arterial blood pressure by hormone(GO:0001990)
0.0 0.3 GO:0007221 positive regulation of transcription of Notch receptor target(GO:0007221)
0.0 0.1 GO:0075522 IRES-dependent viral translational initiation(GO:0075522)
0.0 0.2 GO:0009083 branched-chain amino acid catabolic process(GO:0009083)

Gene overrepresentation in cellular_component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.5 GO:0005594 collagen type IX trimer(GO:0005594)
0.1 0.5 GO:0005683 U7 snRNP(GO:0005683)
0.0 0.2 GO:0005947 mitochondrial alpha-ketoglutarate dehydrogenase complex(GO:0005947)
0.0 0.1 GO:0034457 Mpp10 complex(GO:0034457)
0.0 0.1 GO:0071541 eukaryotic translation initiation factor 3 complex, eIF3m(GO:0071541)

Gene overrepresentation in molecular_function category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 0.9 GO:0016494 C-X-C chemokine receptor activity(GO:0016494) C-X-C chemokine binding(GO:0019958)
0.2 0.5 GO:0071209 U7 snRNA binding(GO:0071209)
0.0 0.1 GO:0030519 snoRNP binding(GO:0030519)
0.0 1.3 GO:0043851 rRNA (adenine-N6,N6-)-dimethyltransferase activity(GO:0000179) rRNA (uridine-2'-O-)-methyltransferase activity(GO:0008650) rRNA (adenine-N6-)-methyltransferase activity(GO:0008988) rRNA (cytosine-C5-)-methyltransferase activity(GO:0009383) selenocysteine methyltransferase activity(GO:0016205) rRNA (adenine) methyltransferase activity(GO:0016433) rRNA (cytosine) methyltransferase activity(GO:0016434) rRNA (guanine) methyltransferase activity(GO:0016435) 1-phenanthrol methyltransferase activity(GO:0018707) protein-arginine N5-methyltransferase activity(GO:0019702) dimethylarsinite methyltransferase activity(GO:0034541) 4,5-dihydroxybenzo(a)pyrene methyltransferase activity(GO:0034807) 1-hydroxypyrene methyltransferase activity(GO:0034931) 1-hydroxy-6-methoxypyrene methyltransferase activity(GO:0034933) demethylmenaquinone methyltransferase activity(GO:0043770) cobalt-precorrin-6B C5-methyltransferase activity(GO:0043776) cobalt-precorrin-7 C15-methyltransferase activity(GO:0043777) cobalt-precorrin-5B C1-methyltransferase activity(GO:0043780) cobalt-precorrin-3 C17-methyltransferase activity(GO:0043782) dimethylamine methyltransferase activity(GO:0043791) hydroxyneurosporene-O-methyltransferase activity(GO:0043803) tRNA (adenine-57, 58-N(1)-) methyltransferase activity(GO:0043827) methylamine-specific methylcobalamin:coenzyme M methyltransferase activity(GO:0043833) trimethylamine methyltransferase activity(GO:0043834) methanol-specific methylcobalamin:coenzyme M methyltransferase activity(GO:0043851) monomethylamine methyltransferase activity(GO:0043852) P-methyltransferase activity(GO:0051994) Se-methyltransferase activity(GO:0051995) 2-phytyl-1,4-naphthoquinone methyltransferase activity(GO:0052624) tRNA (uracil-2'-O-)-methyltransferase activity(GO:0052665) tRNA (cytosine-2'-O-)-methyltransferase activity(GO:0052666) phosphomethylethanolamine N-methyltransferase activity(GO:0052667) tRNA (cytosine-3-)-methyltransferase activity(GO:0052735) rRNA (cytosine-2'-O-)-methyltransferase activity(GO:0070677) rRNA (cytosine-N4-)-methyltransferase activity(GO:0071424) trihydroxyferuloyl spermidine O-methyltransferase activity(GO:0080012)