Motif ID: Pax1_Pax9

Z-value: 0.461

Transcription factors associated with Pax1_Pax9:

Gene SymbolEntrez IDGene Name
Pax1 ENSMUSG00000037034.9 Pax1
Pax9 ENSMUSG00000001497.12 Pax9



Activity profile for motif Pax1_Pax9.

activity profile for motif Pax1_Pax9


Sorted Z-values histogram for motif Pax1_Pax9

Sorted Z-values for motif Pax1_Pax9



Network of associatons between targets according to the STRING database.



First level regulatory network of Pax1_Pax9

PNG image of the network

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Top targets:


Showing 1 to 20 of 24 entries
PromoterScoreRefseqGene SymbolGene Name
chr2_-_36105271 7.122 ENSMUST00000112960.1
ENSMUST00000112967.5
ENSMUST00000112963.1
 Lhx6


LIM homeobox protein 6


chr12_-_90969768 2.558 ENSMUST00000181184.1
 4930544I03Rik
RIKEN cDNA 4930544I03 gene
chr4_-_143299498 2.544 ENSMUST00000030317.7
 Pdpn
podoplanin
chr4_-_143299463 2.491 ENSMUST00000119654.1
 Pdpn
podoplanin
chr5_-_129787175 0.914 ENSMUST00000031399.6
 Psph
phosphoserine phosphatase
chr9_-_22389113 0.787 ENSMUST00000040912.7
 Anln
anillin, actin binding protein
chr19_-_29047847 0.607 ENSMUST00000025696.4
 Ak3
adenylate kinase 3
chr18_+_69344503 0.564 ENSMUST00000114985.3
 Tcf4
transcription factor 4
chr13_-_62607499 0.448 ENSMUST00000091563.4
 6720489N17Rik
RIKEN cDNA 6720489N17 gene
chr5_+_112255813 0.432 ENSMUST00000031286.6
ENSMUST00000131673.1
ENSMUST00000112375.1
 Crybb1


crystallin, beta B1


chr4_+_11558914 0.424 ENSMUST00000178703.1
ENSMUST00000095145.5
ENSMUST00000108306.2
ENSMUST00000070755.6
 Rad54b



RAD54 homolog B (S. cerevisiae)



chrX_+_74313014 0.353 ENSMUST00000114160.1
 Fam50a
family with sequence similarity 50, member A
chr3_-_117360876 0.309 ENSMUST00000061071.8
 D3Bwg0562e
DNA segment, Chr 3, Brigham & Women's Genetics 0562 expressed
chr4_+_115000156 0.307 ENSMUST00000030490.6
 Stil
Scl/Tal1 interrupting locus
chr4_+_115000174 0.265 ENSMUST00000129957.1
 Stil
Scl/Tal1 interrupting locus
chr13_-_62520451 0.253 ENSMUST00000082203.6
ENSMUST00000101547.4
 Zfp934

zinc finger protein 934

chr8_+_94838321 0.221 ENSMUST00000034234.8
ENSMUST00000159871.1
 Coq9

coenzyme Q9 homolog (yeast)

chr2_+_84734050 0.162 ENSMUST00000090729.2
 Ypel4
yippee-like 4 (Drosophila)
chr13_-_62777089 0.154 ENSMUST00000167516.2
 Gm5141
predicted gene 5141
chr10_+_77978524 0.149 ENSMUST00000105397.3
ENSMUST00000105398.1
 1810043G02Rik

RIKEN cDNA 1810043G02 gene


Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Showing 1 to 10 of 10 entries
Log-likelihood per target Total log-likelihoodTermDescription
1.2 7.1 GO:1904936 cerebral cortex GABAergic interneuron migration(GO:0021853) interneuron migration(GO:1904936)
1.0 5.0 GO:1901731 positive regulation of platelet aggregation(GO:1901731)
0.2 0.9 GO:0006564 L-serine biosynthetic process(GO:0006564)
0.3 0.8 GO:1904170 regulation of bleb assembly(GO:1904170)
0.1 0.6 GO:0006172 ADP biosynthetic process(GO:0006172)
0.1 0.6 GO:0033504 floor plate development(GO:0033504)
0.1 0.6 GO:0042118 endothelial cell activation(GO:0042118)
0.0 0.4 GO:0008340 determination of adult lifespan(GO:0008340)
0.0 0.2 GO:0006120 mitochondrial electron transport, NADH to ubiquinone(GO:0006120) ubiquinone biosynthetic process(GO:0006744)
0.0 0.1 GO:0072531 pyrimidine-containing compound transmembrane transport(GO:0072531)

Gene overrepresentation in cellular_component category:

Showing 1 to 2 of 2 entries
Log-likelihood per target Total log-likelihoodTermDescription
0.6 5.0 GO:0097197 tetraspanin-enriched microdomain(GO:0097197)
0.2 0.8 GO:0005826 actomyosin contractile ring(GO:0005826)

Gene overrepresentation in molecular_function category:

Showing 1 to 6 of 6 entries
Log-likelihood per target Total log-likelihoodTermDescription
0.5 5.0 GO:0015250 water channel activity(GO:0015250)
0.3 0.9 GO:0004647 phosphoserine phosphatase activity(GO:0004647)
0.2 0.6 GO:0046899 nucleoside triphosphate adenylate kinase activity(GO:0046899)
0.1 0.6 GO:0001011 transcription factor activity, sequence-specific DNA binding, RNA polymerase recruiting(GO:0001011) transcription factor activity, TFIIB-class binding(GO:0001087)
0.1 0.4 GO:0015616 DNA translocase activity(GO:0015616)
0.1 0.4 GO:0005212 structural constituent of eye lens(GO:0005212)

Gene overrepresentation in C2:CP category:

Showing 1 to 1 of 1 entries
Log-likelihood per target Total log-likelihoodTermDescription
0.0 0.6 PID_HEDGEHOG_2PATHWAY Signaling events mediated by the Hedgehog family

Gene overrepresentation in C2:CP:REACTOME category:

Showing 1 to 2 of 2 entries
Log-likelihood per target Total log-likelihoodTermDescription
0.0 0.9 REACTOME_AMINO_ACID_SYNTHESIS_AND_INTERCONVERSION_TRANSAMINATION Genes involved in Amino acid synthesis and interconversion (transamination)
0.0 0.6 REACTOME_MYOGENESIS Genes involved in Myogenesis