Motif ID: Prdm4

Z-value: 0.302


Transcription factors associated with Prdm4:

Gene SymbolEntrez IDGene Name
Prdm4 ENSMUSG00000035529.9 Prdm4

Activity-expression correlation:

Gene SymbolPromoterPearson corr. coef.P-valuePlot
Prdm4mm10_v2_chr10_-_85916902_859170060.047.9e-01Click!


Activity profile for motif Prdm4.

activity profile for motif Prdm4


Sorted Z-values histogram for motif Prdm4

Sorted Z-values for motif Prdm4



Network of associatons between targets according to the STRING database.



First level regulatory network of Prdm4

PNG image of the network

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Top targets:


Showing 1 to 13 of 13 entries
PromoterScoreRefseqGene SymbolGene Name
chr10_+_126978690 1.577 ENSMUST00000105256.2
Ctdsp2
CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2
chr11_+_102604370 1.499 ENSMUST00000057893.5
Fzd2
frizzled homolog 2 (Drosophila)
chr1_+_74391479 1.478 ENSMUST00000027367.7
Ctdsp1
CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1
chr5_-_4758216 1.136 ENSMUST00000054294.4
Fzd1
frizzled homolog 1 (Drosophila)
chr11_-_69369377 0.569 ENSMUST00000092971.6
ENSMUST00000108661.1
Chd3

chromodomain helicase DNA binding protein 3

chr5_-_142817654 0.395 ENSMUST00000151477.1
Tnrc18
trinucleotide repeat containing 18
chr5_-_142817387 0.385 ENSMUST00000036253.6
Tnrc18
trinucleotide repeat containing 18
chr9_+_17030045 0.379 ENSMUST00000164523.2
Gm5611
predicted gene 5611
chr10_+_26822560 0.376 ENSMUST00000135866.1
Arhgap18
Rho GTPase activating protein 18
chr17_+_24473884 0.339 ENSMUST00000054946.3
ENSMUST00000164508.1
Bricd5

BRICHOS domain containing 5

chr12_+_113152012 0.122 ENSMUST00000006523.7
Crip1
cysteine-rich protein 1 (intestinal)
chrX_-_7605374 0.110 ENSMUST00000033483.4
Ccdc22
coiled-coil domain containing 22
chr2_+_97467657 0.004 ENSMUST00000059049.7
Lrrc4c
leucine rich repeat containing 4C

Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Showing 1 to 5 of 5 entries
Log-likelihood per target Total log-likelihoodTermDescription
0.1 3.1 GO:2000134 negative regulation of G1/S transition of mitotic cell cycle(GO:2000134)
0.4 2.6 GO:0060022 hard palate development(GO:0060022)
0.1 0.8 GO:0031507 heterochromatin assembly(GO:0031507)
0.0 0.1 GO:0007253 cytoplasmic sequestering of NF-kappaB(GO:0007253)
0.0 0.1 GO:0071493 cellular response to UV-B(GO:0071493)

Gene overrepresentation in cellular_component category:

Showing 1 to 2 of 2 entries
Log-likelihood per target Total log-likelihoodTermDescription
0.1 0.8 GO:0005677 chromatin silencing complex(GO:0005677)
0.0 0.6 GO:0016581 NuRD complex(GO:0016581) CHD-type complex(GO:0090545)

Gene overrepresentation in molecular_function category:

Showing 1 to 2 of 2 entries
Log-likelihood per target Total log-likelihoodTermDescription
0.3 3.1 GO:0008420 CTD phosphatase activity(GO:0008420)
0.1 2.6 GO:0042813 Wnt-activated receptor activity(GO:0042813)

Gene overrepresentation in C2:CP category:

Showing 1 to 2 of 2 entries
Log-likelihood per target Total log-likelihoodTermDescription
0.1 3.1 PID_SMAD2_3PATHWAY Regulation of cytoplasmic and nuclear SMAD2/3 signaling
0.1 2.6 PID_WNT_SIGNALING_PATHWAY Wnt signaling network

Gene overrepresentation in C2:CP:REACTOME category:

Showing 1 to 2 of 2 entries
Log-likelihood per target Total log-likelihoodTermDescription
0.0 2.6 REACTOME_CLASS_B_2_SECRETIN_FAMILY_RECEPTORS Genes involved in Class B/2 (Secretin family receptors)
0.0 1.6 REACTOME_ACTIVATION_OF_CHAPERONE_GENES_BY_XBP1S Genes involved in Activation of Chaperone Genes by XBP1(S)