Motif ID: Rarb

Z-value: 0.334


Transcription factors associated with Rarb:

Gene SymbolEntrez IDGene Name
Rarb ENSMUSG00000017491.8 Rarb

Activity-expression correlation:

Gene SymbolPromoterPearson corr. coef.P-valuePlot
Rarbmm10_v2_chr14_-_16575456_16575501-0.453.2e-03Click!


Activity profile for motif Rarb.

activity profile for motif Rarb


Sorted Z-values histogram for motif Rarb

Sorted Z-values for motif Rarb



Network of associatons between targets according to the STRING database.



First level regulatory network of Rarb

PNG image of the network

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Top targets:


Showing 1 to 20 of 26 entries
PromoterScoreRefseqGene SymbolGene Name
chr1_+_90203980 3.328 ENSMUST00000065587.4
ENSMUST00000159654.1
 Ackr3

atypical chemokine receptor 3

chr3_+_88081997 1.862 ENSMUST00000071812.5
 Iqgap3
IQ motif containing GTPase activating protein 3
chr1_+_191821444 1.652 ENSMUST00000027931.7
 Nek2
NIMA (never in mitosis gene a)-related expressed kinase 2
chr5_+_92897981 1.160 ENSMUST00000113051.2
 Shroom3
shroom family member 3
chr7_-_116031047 0.964 ENSMUST00000106612.1
 Sox6
SRY-box containing gene 6
chr2_+_30281043 0.700 ENSMUST00000143119.2
 RP23-395P6.9
RP23-395P6.9
chr8_+_36489191 0.636 ENSMUST00000171777.1
 6430573F11Rik
RIKEN cDNA 6430573F11 gene
chr11_+_83409137 0.575 ENSMUST00000021022.3
 Rasl10b
RAS-like, family 10, member B
chr10_-_92722356 0.563 ENSMUST00000020163.6
 Nedd1
neural precursor cell expressed, developmentally down-regulated gene 1
chr11_+_83409655 0.535 ENSMUST00000175848.1
ENSMUST00000108140.3
 Rasl10b

RAS-like, family 10, member B

chr15_-_98662858 0.532 ENSMUST00000162384.1
ENSMUST00000003450.8
 Ddx23

DEAD (Asp-Glu-Ala-Asp) box polypeptide 23

chr2_-_163417092 0.508 ENSMUST00000127038.1
 Oser1
oxidative stress responsive serine rich 1
chr8_+_106683052 0.437 ENSMUST00000048359.4
 Tango6
transport and golgi organization 6
chr19_-_8786272 0.349 ENSMUST00000176610.1
ENSMUST00000177056.1
 Taf6l

TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor

chr11_-_45944910 0.342 ENSMUST00000129820.1
 Lsm11
U7 snRNP-specific Sm-like protein LSM11
chr19_-_8786245 0.312 ENSMUST00000177216.1
 Taf6l
TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor
chr16_+_38346986 0.287 ENSMUST00000050273.8
ENSMUST00000120495.1
ENSMUST00000119704.1
 Cox17

Gm21987
cytochrome c oxidase assembly protein 17

predicted gene 21987
chr18_+_65582390 0.247 ENSMUST00000169679.1
ENSMUST00000183326.1
 Zfp532

zinc finger protein 532

chr19_-_8786408 0.239 ENSMUST00000176496.1
 Taf6l
TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor
chr7_+_127904079 0.150 ENSMUST00000071056.7
 Bckdk
branched chain ketoacid dehydrogenase kinase

Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Showing 1 to 12 of 12 entries
Log-likelihood per target Total log-likelihoodTermDescription
0.1 3.3 GO:1902230 negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage(GO:1902230)
0.2 1.9 GO:0033601 positive regulation of mammary gland epithelial cell proliferation(GO:0033601)
0.4 1.7 GO:0030997 regulation of centriole-centriole cohesion(GO:0030997)
0.0 1.2 GO:0002066 columnar/cuboidal epithelial cell development(GO:0002066)
0.1 1.0 GO:2000741 positive regulation of mesenchymal stem cell differentiation(GO:2000741)
0.0 0.9 GO:0043966 histone H3 acetylation(GO:0043966)
0.1 0.6 GO:0002098 tRNA wobble uridine modification(GO:0002098)
0.0 0.6 GO:0001990 regulation of systemic arterial blood pressure by hormone(GO:0001990)
0.0 0.6 GO:0071539 protein localization to centrosome(GO:0071539)
0.1 0.3 GO:1904959 regulation of electron carrier activity(GO:1904732) regulation of cytochrome-c oxidase activity(GO:1904959)
0.0 0.3 GO:0006398 mRNA 3'-end processing by stem-loop binding and cleavage(GO:0006398)
0.0 0.1 GO:0098734 protein depalmitoylation(GO:0002084) negative regulation of Golgi to plasma membrane protein transport(GO:0042997) negative regulation of establishment of protein localization to plasma membrane(GO:0090005) macromolecule depalmitoylation(GO:0098734)

Gene overrepresentation in cellular_component category:

Showing 1 to 8 of 8 entries
Log-likelihood per target Total log-likelihoodTermDescription
0.0 3.3 GO:0005905 clathrin-coated pit(GO:0005905)
0.0 1.9 GO:0016328 lateral plasma membrane(GO:0016328)
0.0 1.7 GO:0000794 condensed nuclear chromosome(GO:0000794)
0.0 0.9 GO:0030914 STAGA complex(GO:0030914)
0.1 0.6 GO:0000931 gamma-tubulin large complex(GO:0000931) gamma-tubulin ring complex(GO:0008274)
0.0 0.5 GO:0005682 U5 snRNP(GO:0005682)
0.1 0.3 GO:0005683 U7 snRNP(GO:0005683)
0.0 0.1 GO:0005947 mitochondrial alpha-ketoglutarate dehydrogenase complex(GO:0005947)

Gene overrepresentation in molecular_function category:

Showing 1 to 6 of 6 entries
Log-likelihood per target Total log-likelihoodTermDescription
1.1 3.3 GO:0016494 C-X-C chemokine receptor activity(GO:0016494) C-X-C chemokine binding(GO:0019958)
0.5 1.9 GO:0032027 myosin light chain binding(GO:0032027)
0.0 0.9 GO:0004402 histone acetyltransferase activity(GO:0004402)
0.1 0.6 GO:0016300 tRNA (uracil) methyltransferase activity(GO:0016300)
0.1 0.3 GO:0071209 U7 snRNA binding(GO:0071209)
0.0 0.3 GO:0016531 copper chaperone activity(GO:0016531)

Gene overrepresentation in C2:CP category:

Showing 1 to 2 of 2 entries
Log-likelihood per target Total log-likelihoodTermDescription
0.0 1.9 PID_RAC1_PATHWAY RAC1 signaling pathway
0.0 1.7 PID_FOXM1_PATHWAY FOXM1 transcription factor network

Gene overrepresentation in C2:CP:REACTOME category:

Showing 1 to 4 of 4 entries
Log-likelihood per target Total log-likelihoodTermDescription
0.1 1.7 REACTOME_APC_CDC20_MEDIATED_DEGRADATION_OF_NEK2A Genes involved in APC-Cdc20 mediated degradation of Nek2A
0.1 0.6 REACTOME_RECRUITMENT_OF_NUMA_TO_MITOTIC_CENTROSOMES Genes involved in Recruitment of NuMA to mitotic centrosomes
0.0 0.5 REACTOME_MRNA_SPLICING_MINOR_PATHWAY Genes involved in mRNA Splicing - Minor Pathway
0.0 0.3 REACTOME_SLBP_DEPENDENT_PROCESSING_OF_REPLICATION_DEPENDENT_HISTONE_PRE_MRNAS Genes involved in SLBP Dependent Processing of Replication-Dependent Histone Pre-mRNAs