Motif ID: Hoxb1

Z-value: 0.463


Transcription factors associated with Hoxb1:

Gene SymbolEntrez IDGene Name
Hoxb1 ENSMUSG00000018973.2 Hoxb1



Activity profile for motif Hoxb1.

activity profile for motif Hoxb1


Sorted Z-values histogram for motif Hoxb1

Sorted Z-values for motif Hoxb1



Network of associatons between targets according to the STRING database.



First level regulatory network of Hoxb1

PNG image of the network

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Top targets:


Promoter Score Refseq Gene Symbol Gene Name
chr1_-_119053339 2.495 ENSMUST00000161301.1
ENSMUST00000161451.1
ENSMUST00000162607.1
Gli2


GLI-Kruppel family member GLI2


chr1_-_119053619 1.466 ENSMUST00000062483.8
Gli2
GLI-Kruppel family member GLI2
chr3_+_127633134 1.347 ENSMUST00000029587.7
Neurog2
neurogenin 2
chr14_-_69284982 1.326 ENSMUST00000183882.1
ENSMUST00000037064.4
Slc25a37

solute carrier family 25, member 37

chr5_-_24527276 1.117 ENSMUST00000088311.4
Gbx1
gastrulation brain homeobox 1
chr8_-_87959560 0.983 ENSMUST00000109655.2
Zfp423
zinc finger protein 423
chr7_+_73391160 0.973 ENSMUST00000128471.1
Rgma
RGM domain family, member A
chr9_+_65890237 0.963 ENSMUST00000045802.6
2810417H13Rik
RIKEN cDNA 2810417H13 gene
chr2_+_84840612 0.934 ENSMUST00000111625.1
Slc43a1
solute carrier family 43, member 1
chr14_-_69503220 0.657 ENSMUST00000180059.2
Gm21464
predicted gene, 21464
chrX_+_110814390 0.613 ENSMUST00000078229.3
Pou3f4
POU domain, class 3, transcription factor 4
chr10_-_63421739 0.598 ENSMUST00000054760.4
Gm7075
predicted gene 7075
chr3_-_65958236 0.558 ENSMUST00000029416.7
Ccnl1
cyclin L1
chr8_+_84901928 0.529 ENSMUST00000067060.7
Klf1
Kruppel-like factor 1 (erythroid)
chr4_-_91399984 0.492 ENSMUST00000102799.3
Elavl2
ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)
chr4_+_103114385 0.456 ENSMUST00000106858.1
Mier1
mesoderm induction early response 1 homolog (Xenopus laevis
chr4_-_103114238 0.452 ENSMUST00000036451.8
ENSMUST00000036557.8
Wdr78

WD repeat domain 78

chr10_+_67185730 0.446 ENSMUST00000173689.1
Jmjd1c
jumonji domain containing 1C
chr5_+_139543889 0.443 ENSMUST00000174792.1
ENSMUST00000031523.8
Uncx

UNC homeobox

chr4_-_103114555 0.429 ENSMUST00000106868.3
Wdr78
WD repeat domain 78
chr10_-_92162753 0.428 ENSMUST00000182197.1
Rmst
rhabdomyosarcoma 2 associated transcript (non-coding RNA)
chr14_-_69503316 0.412 ENSMUST00000179116.2
Gm21464
predicted gene, 21464
chr12_+_38780284 0.408 ENSMUST00000162563.1
ENSMUST00000161164.1
ENSMUST00000160996.1
Etv1


ets variant gene 1


chr3_+_41564880 0.403 ENSMUST00000168086.1
Phf17
PHD finger protein 17
chr16_-_56024628 0.376 ENSMUST00000119981.1
ENSMUST00000096021.3
Pcnp

PEST proteolytic signal containing nuclear protein

chr2_+_124610573 0.361 ENSMUST00000103239.3
ENSMUST00000103240.2
Sema6d

sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D

chr8_-_8639363 0.357 ENSMUST00000152698.1
Efnb2
ephrin B2
chr9_-_91365778 0.340 ENSMUST00000065360.3
Zic1
zinc finger protein of the cerebellum 1
chr9_-_91365756 0.332 ENSMUST00000034927.6
Zic1
zinc finger protein of the cerebellum 1
chr1_+_153665274 0.315 ENSMUST00000152114.1
ENSMUST00000111812.1
Rgs8

regulator of G-protein signaling 8

chr1_-_157412576 0.309 ENSMUST00000078308.6
ENSMUST00000139470.1
Rasal2

RAS protein activator like 2

chr3_+_58526303 0.308 ENSMUST00000138848.1
Eif2a
eukaryotic translation initiation factor 2A
chr3_-_88762244 0.307 ENSMUST00000183267.1
Syt11
synaptotagmin XI
chr10_+_127677064 0.305 ENSMUST00000118612.1
ENSMUST00000048099.4
Tmem194

transmembrane protein 194

chr8_-_83458386 0.294 ENSMUST00000081506.3
Scoc
short coiled-coil protein
chr18_-_56562261 0.290 ENSMUST00000066208.6
ENSMUST00000172734.1
Aldh7a1

aldehyde dehydrogenase family 7, member A1

chr3_-_58525867 0.287 ENSMUST00000029385.7
Serp1
stress-associated endoplasmic reticulum protein 1
chr18_+_42511496 0.283 ENSMUST00000025375.7
Tcerg1
transcription elongation regulator 1 (CA150)
chr10_-_88605017 0.275 ENSMUST00000119185.1
ENSMUST00000121629.1
Mybpc1

myosin binding protein C, slow-type

chr8_-_105471481 0.258 ENSMUST00000014990.6
Tppp3
tubulin polymerization-promoting protein family member 3
chr4_+_118428078 0.250 ENSMUST00000006557.6
ENSMUST00000167636.1
ENSMUST00000102673.4
Elovl1


elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1


chr4_+_103114712 0.249 ENSMUST00000143417.1
Mier1
mesoderm induction early response 1 homolog (Xenopus laevis
chr2_+_124610278 0.246 ENSMUST00000051419.8
ENSMUST00000077847.5
ENSMUST00000078621.5
ENSMUST00000076335.5
Sema6d



sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D



chr7_+_119690026 0.240 ENSMUST00000047045.8
Acsm4
acyl-CoA synthetase medium-chain family member 4
chr4_-_63662910 0.239 ENSMUST00000184252.1
Gm11214
predicted gene 11214
chr18_-_56562187 0.235 ENSMUST00000171844.2
Aldh7a1
aldehyde dehydrogenase family 7, member A1
chr18_-_56562215 0.235 ENSMUST00000170309.1
Aldh7a1
aldehyde dehydrogenase family 7, member A1
chr5_+_119834663 0.201 ENSMUST00000018407.6
Tbx5
T-box 5
chr1_-_135688094 0.189 ENSMUST00000112103.1
Nav1
neuron navigator 1
chr5_+_136967859 0.185 ENSMUST00000001790.5
Cldn15
claudin 15
chrX_+_143518671 0.179 ENSMUST00000134402.1
Pak3
p21 protein (Cdc42/Rac)-activated kinase 3
chr5_+_37735519 0.172 ENSMUST00000073554.3
Cytl1
cytokine-like 1
chr7_+_48789003 0.170 ENSMUST00000118927.1
ENSMUST00000125280.1
Zdhhc13

zinc finger, DHHC domain containing 13

chr3_+_58525821 0.168 ENSMUST00000029387.8
Eif2a
eukaryotic translation initiation factor 2A
chr9_-_13245741 0.168 ENSMUST00000110582.2
Jrkl
jerky homolog-like (mouse)
chr5_+_42067960 0.157 ENSMUST00000087332.4
Gm16223
predicted gene 16223
chrX_+_166344692 0.155 ENSMUST00000112223.1
ENSMUST00000112224.1
ENSMUST00000112229.2
ENSMUST00000112228.1
ENSMUST00000112227.2
ENSMUST00000112226.2
Gpm6b





glycoprotein m6b





chr19_-_41743665 0.132 ENSMUST00000025993.3
Slit1
slit homolog 1 (Drosophila)
chr17_+_29490812 0.124 ENSMUST00000024811.6
Pim1
proviral integration site 1
chrX_+_20617503 0.109 ENSMUST00000115375.1
ENSMUST00000115374.1
ENSMUST00000084383.3
Rbm10


RNA binding motif protein 10


chr8_+_25808474 0.099 ENSMUST00000033979.4
Star
steroidogenic acute regulatory protein
chr5_-_124354671 0.081 ENSMUST00000031341.4
Cdk2ap1
CDK2 (cyclin-dependent kinase 2)-associated protein 1
chr2_+_147012996 0.078 ENSMUST00000028921.5
Xrn2
5'-3' exoribonuclease 2
chr17_-_85688252 0.077 ENSMUST00000024947.7
ENSMUST00000163568.2
Six2

sine oculis-related homeobox 2

chr1_+_178798438 0.054 ENSMUST00000160789.1
Kif26b
kinesin family member 26B
chr7_+_101321703 0.030 ENSMUST00000174291.1
ENSMUST00000167888.2
ENSMUST00000172662.1
ENSMUST00000173270.1
ENSMUST00000174083.1
Stard10




START domain containing 10




chr11_+_75486813 0.025 ENSMUST00000018449.4
ENSMUST00000102510.1
ENSMUST00000131283.1
Prpf8


pre-mRNA processing factor 8


chr6_+_142413441 0.021 ENSMUST00000088263.4
B230216G23Rik
RIKEN cDNA B230216G23 gene
chr9_-_108083330 0.014 ENSMUST00000159372.1
ENSMUST00000160249.1
Rnf123

ring finger protein 123


Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Log-likelihood per target  Total log-likelihood Term Description
1.0 4.0 GO:0060032 notochord regression(GO:0060032)
0.3 1.1 GO:0097374 sensory neuron axon guidance(GO:0097374)
0.1 0.3 GO:1905154 negative regulation of tumor necrosis factor secretion(GO:1904468) negative regulation of membrane invagination(GO:1905154)
0.1 1.0 GO:0048681 negative regulation of axon regeneration(GO:0048681)
0.1 0.5 GO:1990928 response to amino acid starvation(GO:1990928)
0.1 1.0 GO:0019985 translesion synthesis(GO:0019985)
0.1 0.4 GO:0030718 germ-line stem cell population maintenance(GO:0030718)
0.1 0.6 GO:2001054 negative regulation of mesenchymal cell apoptotic process(GO:2001054)
0.1 0.7 GO:0031937 positive regulation of chromatin silencing(GO:0031937)
0.1 0.6 GO:1901409 regulation of phosphorylation of RNA polymerase II C-terminal domain(GO:1901407) positive regulation of phosphorylation of RNA polymerase II C-terminal domain(GO:1901409)
0.1 0.4 GO:0035726 common myeloid progenitor cell proliferation(GO:0035726)
0.0 0.4 GO:1903847 regulation of aorta morphogenesis(GO:1903847) positive regulation of aorta morphogenesis(GO:1903849)
0.0 0.2 GO:0051890 regulation of cardioblast differentiation(GO:0051890)
0.0 0.1 GO:0072038 mesenchymal stem cell maintenance involved in nephron morphogenesis(GO:0072038)
0.0 0.3 GO:0061635 regulation of protein complex stability(GO:0061635)
0.0 0.5 GO:0043249 erythrocyte maturation(GO:0043249)
0.0 0.1 GO:0033563 dorsal/ventral axon guidance(GO:0033563)
0.0 0.1 GO:0072092 ureteric bud invasion(GO:0072092)
0.0 0.3 GO:0060124 positive regulation of growth hormone secretion(GO:0060124)
0.0 0.3 GO:0060159 regulation of dopamine receptor signaling pathway(GO:0060159)
0.0 0.9 GO:0015804 neutral amino acid transport(GO:0015804)
0.0 0.2 GO:0019368 fatty acid elongation, saturated fatty acid(GO:0019367) fatty acid elongation, unsaturated fatty acid(GO:0019368) fatty acid elongation, monounsaturated fatty acid(GO:0034625) fatty acid elongation, polyunsaturated fatty acid(GO:0034626)
0.0 0.2 GO:0051611 negative regulation of neurotransmitter uptake(GO:0051581) serotonin uptake(GO:0051610) regulation of serotonin uptake(GO:0051611) negative regulation of serotonin uptake(GO:0051612)
0.0 0.6 GO:0014912 negative regulation of smooth muscle cell migration(GO:0014912)
0.0 0.1 GO:0070561 vitamin D receptor signaling pathway(GO:0070561)
0.0 0.6 GO:0030513 positive regulation of BMP signaling pathway(GO:0030513)
0.0 0.1 GO:0034393 positive regulation of smooth muscle cell apoptotic process(GO:0034393)
0.0 0.1 GO:0006703 estrogen biosynthetic process(GO:0006703)
0.0 0.7 GO:0007628 adult walking behavior(GO:0007628) walking behavior(GO:0090659)
0.0 0.4 GO:0007638 mechanosensory behavior(GO:0007638)
0.0 1.3 GO:0021954 central nervous system neuron development(GO:0021954)

Gene overrepresentation in cellular_component category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 4.0 GO:0097542 ciliary tip(GO:0097542)
0.1 0.5 GO:0005850 eukaryotic translation initiation factor 2 complex(GO:0005850)
0.1 0.3 GO:0048787 presynaptic active zone membrane(GO:0048787)
0.0 0.2 GO:0031235 intrinsic component of the cytoplasmic side of the plasma membrane(GO:0031235)
0.0 0.6 GO:0008023 transcription elongation factor complex(GO:0008023)

Gene overrepresentation in molecular_function category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.8 GO:0008802 betaine-aldehyde dehydrogenase activity(GO:0008802)
0.1 1.0 GO:1990459 transferrin receptor binding(GO:1990459)
0.1 0.2 GO:0047760 butyrate-CoA ligase activity(GO:0047760)
0.1 0.6 GO:0003680 AT DNA binding(GO:0003680)
0.0 0.4 GO:0018602 sulfonate dioxygenase activity(GO:0000907) 2,4-dichlorophenoxyacetate alpha-ketoglutarate dioxygenase activity(GO:0018602) procollagen-proline dioxygenase activity(GO:0019798) peptidyl-proline dioxygenase activity(GO:0031543) hypophosphite dioxygenase activity(GO:0034792) DNA-N1-methyladenine dioxygenase activity(GO:0043734) gibberellin 2-beta-dioxygenase activity(GO:0045543) C-19 gibberellin 2-beta-dioxygenase activity(GO:0052634) C-20 gibberellin 2-beta-dioxygenase activity(GO:0052635)
0.0 1.3 GO:0070888 E-box binding(GO:0070888)
0.0 0.1 GO:0001160 transcription termination site sequence-specific DNA binding(GO:0001147) transcription termination site DNA binding(GO:0001160)
0.0 0.2 GO:0102338 fatty acid elongase activity(GO:0009922) 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
0.0 0.9 GO:0015175 neutral amino acid transmembrane transporter activity(GO:0015175)
0.0 5.0 GO:0001077 transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding(GO:0001077)
0.0 0.1 GO:0048495 Roundabout binding(GO:0048495)
0.0 0.6 GO:0030215 semaphorin receptor binding(GO:0030215)
0.0 0.3 GO:0070064 proline-rich region binding(GO:0070064)
0.0 0.6 GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity(GO:0016538)