ISMARA results

All motifs sorted by activity significance

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Show 50100All entries

Showing 1 to 50 of 503 entries

Motif name	Z-value	Associated genes	Profile	Logo
Ybx1_Nfya_Nfyb_Nfyc_Cebpz	7.364	Ybx1 Nfya Nfyb Nfyc Cebpz
E2f1	7.069	E2f1
Hdx	5.537	Hdx
E2f2_E2f5	5.393	E2f2 E2f5
Rest	4.497	Rest
Wrnip1_Mta3_Rcor1	4.477	Wrnip1 Mta3 Rcor1
Nfatc1	4.409	Nfatc1
Yy1_Yy2	4.343	Yy1 Yy2
Chd1_Pml	4.104	Chd1 Pml
Hoxb7	3.953	Hoxb7
Taf1	3.577	Taf1
Klf1	3.526	Klf1
Irf2_Irf1_Irf8_Irf9_Irf7	3.465	Irf2 Irf1 Irf8 Irf9 Irf7
Egr1	3.396	Egr1
Tgif1_Meis3	3.370	Tgif1 Meis3
Zbtb33_Chd2	3.301	Zbtb33 Chd2
E2f4	3.165	E2f4
Nrf1	3.104	Nrf1
Max_Mycn	2.989	Max Mycn
Zfx_Zfp711	2.980	Zfx Zfp711
Zfp110	2.931	Zfp110
Elf1_Elf2_Etv2_Elf4	2.901	Elf1 Elf2 Etv2 Elf4
Gcm2	2.888	Gcm2
Rfx3_Rfx1_Rfx4	2.887	Rfx3 Rfx1 Rfx4
Nfia	2.684	Nfia
Hcfc1_Six5_Smarcc2_Zfp143	2.679	Hcfc1 Six5 Smarcc2 Zfp143
Gtf2i_Gtf2f1	2.568	Gtf2i Gtf2f1
Mecp2	2.555	Mecp2
Sp100	2.551	Sp100
Hic2	2.550	Hic2
Snai1_Zeb1_Snai2	2.544	Snai1 Zeb1 Snai2
Myb	2.475	Myb
Mybl2	2.474	Mybl2
Cpeb1	2.451	Cpeb1
Foxi1_Foxo1	2.400	Foxi1 Foxo1
Tcf4_Mesp1	2.334	Tcf4 Mesp1
Pou5f1	2.306	Pou5f1
Sox2	2.261	Sox2
Hsf2	2.251	Hsf2
Creb1	2.245	Creb1
Tead3_Tead4	2.243	Tead3 Tead4
Esr2	2.181	Esr2
Myf6	2.129	Myf6
Ezh2_Atf2_Ikzf1	2.128	Ezh2 Atf2 Ikzf1
Zbtb14	2.109	Zbtb14
Nfil3_Tef	2.101	Nfil3 Tef
Ppara	2.091	Ppara
Epas1_Bcl3	2.056	Epas1 Bcl3
E2f8	2.050	E2f8
Sp1	2.030	Sp1

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In order to use ARMADA for infering putative regulatory networks from timecourse data, please set for every sample a timepoint, gap from previous timepoint and replicate. If you have only one replicate per sample you can leave replicate field unset.