Motif ID: Prdm1

Z-value: 0.667


Transcription factors associated with Prdm1:

Gene SymbolEntrez IDGene Name
Prdm1 ENSMUSG00000038151.6 Prdm1



Activity profile for motif Prdm1.

activity profile for motif Prdm1


Sorted Z-values histogram for motif Prdm1

Sorted Z-values for motif Prdm1



Network of associatons between targets according to the STRING database.



First level regulatory network of Prdm1

PNG image of the network

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Top targets:


Showing 1 to 20 of 200 entries
PromoterScoreRefseqGene SymbolGene Name
chr13_-_3918157 2.169 ENSMUST00000091853.4
 Net1
neuroepithelial cell transforming gene 1
chr18_-_41951187 1.435 ENSMUST00000070949.4
 Prelid2
PRELI domain containing 2
chr2_-_105399286 1.381 ENSMUST00000006128.6
 Rcn1
reticulocalbin 1
chr9_+_38718263 1.288 ENSMUST00000001544.5
ENSMUST00000118144.1
 Vwa5a

von Willebrand factor A domain containing 5A

chr3_+_145758674 1.263 ENSMUST00000029845.8
 Ddah1
dimethylarginine dimethylaminohydrolase 1
chr4_-_137796350 1.194 ENSMUST00000030551.4
 Alpl
alkaline phosphatase, liver/bone/kidney
chr14_+_65805832 1.193 ENSMUST00000022612.3
 Pbk
PDZ binding kinase
chr14_+_65806066 1.165 ENSMUST00000139644.1
 Pbk
PDZ binding kinase
chr13_+_74639866 1.155 ENSMUST00000169114.1
 Erap1
endoplasmic reticulum aminopeptidase 1
chr5_+_3343893 1.153 ENSMUST00000165117.1
 Cdk6
cyclin-dependent kinase 6
chr1_-_156674290 1.147 ENSMUST00000079625.4
 Tor3a
torsin family 3, member A
chr11_-_82991829 1.090 ENSMUST00000092840.4
ENSMUST00000038211.5
 Slfn9

schlafen 9

chr4_-_154636831 1.087 ENSMUST00000030902.6
ENSMUST00000105637.1
ENSMUST00000070313.7
ENSMUST00000105636.1
ENSMUST00000105638.2
ENSMUST00000097759.2
ENSMUST00000124771.1
 Prdm16






PR domain containing 16






chr19_+_36409719 1.078 ENSMUST00000062389.5
 Pcgf5
polycomb group ring finger 5
chr4_-_96591555 1.060 ENSMUST00000055693.8
 Cyp2j9
cytochrome P450, family 2, subfamily j, polypeptide 9
chrX_-_106485214 1.031 ENSMUST00000039447.7
 Fndc3c1
fibronectin type III domain containing 3C1
chr11_-_82991137 1.028 ENSMUST00000138797.1
 Slfn9
schlafen 9
chr4_-_117182623 1.015 ENSMUST00000065896.2
 Kif2c
kinesin family member 2C
chr15_+_32920723 1.000 ENSMUST00000022871.5
 Sdc2
syndecan 2
chr9_-_107668967 0.957 ENSMUST00000177567.1
 Slc38a3
solute carrier family 38, member 3

Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Showing 1 to 20 of 89 entries
Log-likelihood per target Total log-likelihoodTermDescription
0.0 2.4 GO:0070303 negative regulation of stress-activated MAPK cascade(GO:0032873) negative regulation of stress-activated protein kinase signaling cascade(GO:0070303)
0.1 2.2 GO:0051451 myoblast migration(GO:0051451)
0.5 1.6 GO:1990481 snoRNA guided rRNA pseudouridine synthesis(GO:0000454) snRNA pseudouridine synthesis(GO:0031120) mRNA pseudouridine synthesis(GO:1990481)
0.0 1.5 GO:0015914 phospholipid transport(GO:0015914)
0.1 1.3 GO:0006527 arginine catabolic process(GO:0006527)
0.1 1.3 GO:0019885 antigen processing and presentation of endogenous peptide antigen via MHC class I(GO:0019885)
0.4 1.2 GO:0043696 dedifferentiation(GO:0043696) cell dedifferentiation(GO:0043697)
0.0 1.2 GO:0046677 response to antibiotic(GO:0046677)
0.4 1.1 GO:0045349 interferon-alpha biosynthetic process(GO:0045349) regulation of interferon-alpha biosynthetic process(GO:0045354)
0.2 1.1 GO:0003383 apical constriction(GO:0003383)
0.2 1.1 GO:0090336 positive regulation of brown fat cell differentiation(GO:0090336)
0.1 1.1 GO:0019369 arachidonic acid metabolic process(GO:0019369)
0.2 1.0 GO:0006867 asparagine transport(GO:0006867) glutamine transport(GO:0006868)
0.2 1.0 GO:0030951 establishment or maintenance of microtubule cytoskeleton polarity(GO:0030951)
0.3 0.9 GO:0097461 ferric iron import(GO:0033216) ferric iron import into cell(GO:0097461)
0.3 0.9 GO:0006553 lysine metabolic process(GO:0006553)
0.1 0.9 GO:0043569 negative regulation of insulin-like growth factor receptor signaling pathway(GO:0043569)
0.1 0.9 GO:0046826 negative regulation of protein export from nucleus(GO:0046826) protein K6-linked ubiquitination(GO:0085020)
0.0 0.9 GO:0006278 RNA-dependent DNA biosynthetic process(GO:0006278) telomere maintenance via telomerase(GO:0007004)
0.3 0.8 GO:0006001 fructose catabolic process(GO:0006001) fructose catabolic process to hydroxyacetone phosphate and glyceraldehyde-3-phosphate(GO:0061624) glycolytic process through fructose-1-phosphate(GO:0061625)

Gene overrepresentation in cellular_component category:

Showing 1 to 20 of 43 entries
Log-likelihood per target Total log-likelihoodTermDescription
0.0 2.3 GO:0005788 endoplasmic reticulum lumen(GO:0005788)
0.0 1.7 GO:0005758 mitochondrial intermembrane space(GO:0005758)
0.4 1.6 GO:0090661 box H/ACA telomerase RNP complex(GO:0090661)
0.0 1.2 GO:0000307 cyclin-dependent protein kinase holoenzyme complex(GO:0000307)
0.1 1.1 GO:0033269 internode region of axon(GO:0033269)
0.0 1.1 GO:0031519 PcG protein complex(GO:0031519)
0.0 1.0 GO:0035371 microtubule plus-end(GO:0035371)
0.1 0.9 GO:0070531 BRCA1-A complex(GO:0070531)
0.0 0.9 GO:0030914 STAGA complex(GO:0030914)
0.0 0.9 GO:0030140 trans-Golgi network transport vesicle(GO:0030140)
0.3 0.8 GO:0070557 PCNA-p21 complex(GO:0070557)
0.1 0.8 GO:0065010 extracellular membrane-bounded organelle(GO:0065010)
0.0 0.8 GO:0005844 polysome(GO:0005844)
0.2 0.7 GO:1990682 CSF1-CSF1R complex(GO:1990682)
0.2 0.7 GO:0005588 collagen type V trimer(GO:0005588)
0.1 0.6 GO:1990454 L-type voltage-gated calcium channel complex(GO:1990454)
0.0 0.6 GO:0016459 myosin complex(GO:0016459)
0.2 0.5 GO:0034457 Mpp10 complex(GO:0034457)
0.1 0.5 GO:0035749 myelin sheath adaxonal region(GO:0035749)
0.0 0.5 GO:0030027 lamellipodium(GO:0030027)

Gene overrepresentation in molecular_function category:

Showing 1 to 20 of 68 entries
Log-likelihood per target Total log-likelihoodTermDescription
0.1 2.2 GO:0017049 GTP-Rho binding(GO:0017049)
0.0 2.0 GO:0003697 single-stranded DNA binding(GO:0003697)
0.4 1.6 GO:0034513 box H/ACA snoRNA binding(GO:0034513)
0.1 1.6 GO:0003950 NAD+ ADP-ribosyltransferase activity(GO:0003950)
0.2 1.4 GO:1990050 phosphatidic acid transporter activity(GO:1990050)
0.0 1.4 GO:0005547 phosphatidylinositol-3,4,5-trisphosphate binding(GO:0005547)
0.0 1.4 GO:0004197 cysteine-type endopeptidase activity(GO:0004197)
0.2 1.3 GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines(GO:0016813)
0.3 1.2 GO:0004035 alkaline phosphatase activity(GO:0004035)
0.1 1.2 GO:0005138 interleukin-6 receptor binding(GO:0005138)
0.0 1.2 GO:0030332 cyclin binding(GO:0030332)
0.2 1.1 GO:0008392 arachidonic acid monooxygenase activity(GO:0008391) arachidonic acid epoxygenase activity(GO:0008392)
0.0 1.1 GO:0016836 hydro-lyase activity(GO:0016836)
0.2 1.0 GO:0015186 L-asparagine transmembrane transporter activity(GO:0015182) L-glutamine transmembrane transporter activity(GO:0015186)
0.1 1.0 GO:0051010 microtubule plus-end binding(GO:0051010)
0.0 1.0 GO:0033613 activating transcription factor binding(GO:0033613)
0.3 0.9 GO:0008823 cupric reductase activity(GO:0008823) ferric-chelate reductase (NADPH) activity(GO:0052851)
0.2 0.9 GO:0016647 oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor(GO:0016647)
0.3 0.8 GO:0030337 DNA polymerase processivity factor activity(GO:0030337) dinucleotide insertion or deletion binding(GO:0032139)
0.3 0.8 GO:0004454 ketohexokinase activity(GO:0004454)