GSE80451: E.coli grown aerobically and anaerobically
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
cra | -0.99 | 7.5e-04 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
eno Show fit | 12.90 |
enolase |
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gapA Show fit | 7.05 |
glyceraldehyde 3-phosphate dehydrogenase |
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prpBCDE Show fit | 6.40 |
2-methylcitrate dehydratase propionyl-CoA synthetase 2-methylisocitrate lyase 2-methylcitrate synthase |
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fruBKA Show fit | 4.36 |
1-phosphofructokinase fructose PTS permease - FruB subunit fructose PTS permease - FruA subunit |
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pykF Show fit | 3.93 |
pyruvate kinase I |
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gapA-yeaD Show fit | 3.27 |
glyceraldehyde 3-phosphate dehydrogenase conserved protein |
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mtlADR Show fit | 3.21 |
MtlR DNA-binding transcriptional repressor mannitol PTS permease mannitol-1-phosphate 5-dehydrogenase |
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cydAB Show fit | 2.85 |
cytochrome bd-I terminal oxidase subunit I cytochrome bd-I terminal oxidase subunit II |
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pfkA Show fit | 2.84 |
6-phosphofructokinase I |
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manXYZ Show fit | 2.57 |
mannose PTS permease - ManX subunit mannose PTS permease - ManY subunit mannose PTS permease - ManZ subunit |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
2.0 | 33.9 | GO:0006096 | glycolytic process(GO:0006096) |
2.3 | 6.9 | GO:0015755 | fructose transport(GO:0015755) |
1.1 | 3.2 | GO:0006059 | hexitol metabolic process(GO:0006059) hexitol catabolic process(GO:0019407) |
1.0 | 3.0 | GO:0019626 | short-chain fatty acid catabolic process(GO:0019626) |
0.1 | 2.0 | GO:0009061 | anaerobic respiration(GO:0009061) |
0.5 | 1.9 | GO:0006577 | amino-acid betaine metabolic process(GO:0006577) |
0.7 | 1.4 | GO:0043471 | regulation of glucose metabolic process(GO:0010906) regulation of cellular catabolic process(GO:0031329) regulation of cellular carbohydrate catabolic process(GO:0043471) |
0.5 | 1.4 | GO:0006067 | ethanol metabolic process(GO:0006067) |
0.2 | 1.3 | GO:0015696 | ammonium transport(GO:0015696) |
0.0 | 0.9 | GO:0051262 | protein tetramerization(GO:0051262) protein homotetramerization(GO:0051289) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 16.3 | GO:0016020 | membrane(GO:0016020) |
4.3 | 12.9 | GO:0005856 | cytoskeleton(GO:0005856) |
0.3 | 5.7 | GO:0019897 | extrinsic component of plasma membrane(GO:0019897) |
0.4 | 2.8 | GO:0061695 | transferase complex, transferring phosphorus-containing groups(GO:0061695) |
0.2 | 1.3 | GO:0005618 | cell wall(GO:0005618) |
0.2 | 0.5 | GO:0070069 | cytochrome complex(GO:0070069) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
3.2 | 12.6 | GO:0043891 | glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity(GO:0004365) glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity(GO:0043891) |
0.3 | 10.1 | GO:0016836 | hydro-lyase activity(GO:0016836) |
2.4 | 7.2 | GO:0008443 | phosphofructokinase activity(GO:0008443) |
1.1 | 6.4 | GO:0016878 | acid-thiol ligase activity(GO:0016878) |
0.2 | 3.2 | GO:0090563 | protein-phosphocysteine-sugar phosphotransferase activity(GO:0090563) |
0.9 | 2.8 | GO:0016682 | oxidoreductase activity, acting on diphenols and related substances as donors(GO:0016679) oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor(GO:0016682) |
0.3 | 2.6 | GO:0015149 | hexose transmembrane transporter activity(GO:0015149) |
0.3 | 1.9 | GO:0004029 | aldehyde dehydrogenase (NAD) activity(GO:0004029) |
0.7 | 1.4 | GO:0004332 | fructose-bisphosphate aldolase activity(GO:0004332) |
0.3 | 1.4 | GO:0008047 | enzyme activator activity(GO:0008047) |