Motif ID: GAGAUGA

Z-value: 0.475


Mature miRNA associated with seed GAGAUGA:

NamemiRBase Accession
mmu-miR-143 MIMAT0000247



Activity profile for motif GAGAUGA.

activity profile for motif GAGAUGA


Sorted Z-values histogram for motif GAGAUGA

Sorted Z-values for motif GAGAUGA



Network of associatons between targets according to the STRING database.



First level regulatory network of GAGAUGA

PNG image of the network

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Top targets:


Showing 1 to 20 of 200 entries
PromoterScoreRefseqGene SymbolGene Name
chr4_-_131978279 6.241 NM_001161797
NM_175306
 Phactr4

phosphatase and actin regulator 4

chr11_-_88579517 4.099 NM_054043
 Msi2
Musashi homolog 2 (Drosophila)
chr3_+_89876566 4.042 NM_022314
 Tpm3
tropomyosin 3, gamma
chr1_-_72921438 3.907 NM_010518
 Igfbp5
insulin-like growth factor binding protein 5
chr6_+_120786207 3.542 NM_153516
 Bcl2l13
BCL2-like 13 (apoptosis facilitator)
chr7_+_65913571 3.403 NM_009728
 Atp10a
ATPase, class V, type 10A
chr9_+_30838224 3.157 NM_001115130
NM_172765
 Zbtb44

zinc finger and BTB domain containing 44

chr6_+_133985717 3.034 NM_007961
 Etv6
ets variant gene 6 (TEL oncogene)
chr15_-_11835393 2.998 NM_001039181
NM_008728
 Npr3

natriuretic peptide receptor 3

chr18_+_39152776 2.936 NM_175164
 Arhgap26
Rho GTPase activating protein 26
chr7_+_82600419 2.751 NM_029332
 Akap13
A kinase (PRKA) anchor protein 13
chr5_+_104183148 2.687 NM_133919
 Aff1
AF4/FMR2 family, member 1
chr5_+_104183591 2.442 NM_001080798
 Aff1
AF4/FMR2 family, member 1
chr1_-_97564139 2.366 NM_001159745
NM_009183
 St8sia4

ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4

chr8_+_72346327 2.059 NM_020028
 Lpar2
lysophosphatidic acid receptor 2
chr4_-_87679175 2.048 NM_027326
 Mllt3
myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3
chr13_+_46513668 1.898 NM_001081425
 Rbm24
RNA binding motif protein 24
chr11_-_95171521 1.786 NM_001195003
NM_001195004
NM_177619
 Myst2


MYST histone acetyltransferase 2


chr15_-_50721552 1.768 NM_032000
 Trps1
trichorhinophalangeal syndrome I (human)
chr6_+_83065466 1.736 NM_020619
 Mogs
mannosyl-oligosaccharide glucosidase

Gene Ontology Analysis

Gene overrepresentation in process category:

Showing 1 to 20 of 41 entries
Enrichment   P-value GO Accession GO Term
3.00 3.24e-02 GO:0001501 skeletal system development
2.42 5.10e-06 GO:0006357 regulation of transcription from RNA polymerase II promoter
2.35 2.19e-02 GO:0045944 positive regulation of transcription from RNA polymerase II promoter
2.22 5.97e-03 GO:0051254 positive regulation of RNA metabolic process
2.21 3.54e-09 GO:0006351 transcription, DNA-dependent
2.21 3.90e-09 GO:0032774 RNA biosynthetic process
2.19 1.04e-02 GO:0045893 positive regulation of transcription, DNA-dependent
2.18 5.34e-03 GO:0010628 positive regulation of gene expression
2.08 1.88e-10 GO:0006355 regulation of transcription, DNA-dependent
2.07 1.77e-02 GO:0045935 positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
2.06 2.75e-10 GO:0051252 regulation of RNA metabolic process
2.05 3.95e-11 GO:2000112 regulation of cellular macromolecule biosynthetic process
2.04 3.67e-11 GO:0010556 regulation of macromolecule biosynthetic process
2.04 2.46e-02 GO:0010557 positive regulation of macromolecule biosynthetic process
2.02 3.14e-02 GO:0051173 positive regulation of nitrogen compound metabolic process
1.96 3.16e-10 GO:0031326 regulation of cellular biosynthetic process
1.95 3.24e-10 GO:0009889 regulation of biosynthetic process
1.94 1.11e-09 GO:0019219 regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
1.94 1.84e-09 GO:0010468 regulation of gene expression
1.92 2.23e-09 GO:0051171 regulation of nitrogen compound metabolic process

Gene overrepresentation in compartment category:

Showing 1 to 11 of 11 entries
Enrichment   P-value GO Accession GO Term
12.22 4.99e-02 GO:0000932 cytoplasmic mRNA processing body
1.60 5.95e-10 GO:0005634 nucleus
1.36 1.03e-09 GO:0043226 organelle
1.36 1.34e-09 GO:0043229 intracellular organelle
1.35 3.49e-07 GO:0043231 intracellular membrane-bounded organelle
1.34 4.34e-07 GO:0043227 membrane-bounded organelle
1.32 1.71e-10 GO:0044424 intracellular part
1.31 2.91e-10 GO:0005622 intracellular
1.26 1.28e-03 GO:0005737 cytoplasm
1.13 1.20e-04 GO:0005623 cell
1.13 1.20e-04 GO:0044464 cell part

Gene overrepresentation in function category:

Showing 1 to 14 of 14 entries
Enrichment   P-value GO Accession GO Term
2.98 1.17e-03 GO:0016563 transcription activator activity
2.69 4.01e-07 GO:0001071 nucleic acid binding transcription factor activity
2.69 4.01e-07 GO:0003700 sequence-specific DNA binding transcription factor activity
2.50 1.11e-04 GO:0043565 sequence-specific DNA binding
2.24 9.62e-05 GO:0030528 transcription regulator activity
1.90 5.87e-04 GO:0008270 zinc ion binding
1.89 1.74e-05 GO:0003677 DNA binding
1.73 4.90e-03 GO:0046914 transition metal ion binding
1.67 9.18e-05 GO:0003676 nucleic acid binding
1.52 4.66e-04 GO:0046872 metal ion binding
1.50 8.30e-04 GO:0043169 cation binding
1.50 9.93e-04 GO:0043167 ion binding
1.29 4.41e-02 GO:0005515 protein binding
1.27 3.22e-07 GO:0005488 binding