ISMARA results: HBP1_HMGB_SSRP1

Motif ID: HBP1_HMGB_SSRP1_UBTF.p2

Gene Symbol	Entrez ID	Gene Name
Hbp1	73389	high mobility group box transcription factor 1
Hmgb2	97165	high mobility group box 2
Hmgb3	15354	high mobility group box 3
Ssrp1	20833	structure specific recognition protein 1
Ubtf	21429	upstream binding transcription factor, RNA polymerase I

Gene Symbol	Promoter	Pearson corr. coef.	P-value	Plot
Hmgb2	chr8_+_59990639	-0.48	5.6e-12	Click!
Ssrp1	chr2_+_84877325	-0.35	8.9e-07	Click!
Hmgb3	chrX_+_68809128	0.24	1.2e-03	Click!
Ubtf	chr11_-_102180258, chr11_-_102178941, chr11_-_102178559, chr11_-_102180282	-0.16	3.2e-02	Click!
Hbp1	chr12_-_32635399	-0.13	8.3e-02	Click!

Search:

Show entries

Showing 1 to 20 of 200 entries

Promoter	Score	Refseq	Gene Symbol	Gene Name
chr6_+_34548512	68.496		Cald1	caldesmon 1
chr8_-_87297283	57.839		Nfix	nuclear factor I/X
chr2_-_84614960	57.230		Serping1	serine (or cysteine) peptidase inhibitor, clade G, member 1
chr3_+_137004089	56.151		Emcn	endomucin
chr3_+_137004041	54.654	NM_001163522 NM_016885	Emcn	endomucin
chr16_+_43619057	54.469		Zbtb20	zinc finger and BTB domain containing 20
chr4_-_75779379	52.199	NM_001014288	Ptprd	protein tyrosine phosphatase, receptor type, D
chr1_+_45390415	51.725		Col3a1	collagen, type III, alpha 1
chr16_+_35002066	50.435		Mylk	myosin, light polypeptide kinase
chr3_-_57651621	50.184	NM_019410	Pfn2	profilin 2
chr8_-_11312686	50.161		Col4a1	collagen, type IV, alpha 1
chr4_-_76240202	48.405	NM_011211	Ptprd	protein tyrosine phosphatase, receptor type, D
chr9_-_117539030	47.932	NM_001172121	Rbms3	RNA binding motif, single stranded interacting protein
chr2_-_84615535	47.051	NM_009776	Serping1	serine (or cysteine) peptidase inhibitor, clade G, member 1
chr6_-_87285690	46.194	NM_054041	Antxr1	anthrax toxin receptor 1
chr4_-_82150687	45.898		Nfib	nuclear factor I/B
chr4_-_82151590	44.976		Nfib	nuclear factor I/B
chr14_-_122097583	44.374	NM_001081039	Dock9	dedicator of cytokinesis 9
chrX_+_54032914	43.281		Fhl1	four and a half LIM domains 1
chr4_-_82151004	42.906		Nfib	nuclear factor I/B

Search:

Show entries

Showing 1 to 20 of 222 entries

Enrichment	P-value	GO Accession	GO Term
6.70	2.32e-04	GO:0031113	regulation of microtubule polymerization
5.78	5.12e-04	GO:0031111	negative regulation of microtubule polymerization or depolymerization
5.48	3.31e-02	GO:0060420	regulation of heart growth
5.00	6.11e-05	GO:0031110	regulation of microtubule polymerization or depolymerization
4.57	7.30e-04	GO:0010464	regulation of mesenchymal cell proliferation
4.30	1.05e-02	GO:0002053	positive regulation of mesenchymal cell proliferation
3.95	1.40e-02	GO:0043242	negative regulation of protein complex disassembly
3.80	6.43e-05	GO:0051494	negative regulation of cytoskeleton organization
3.69	1.18e-04	GO:0016202	regulation of striated muscle tissue development
3.62	7.28e-07	GO:0048706	embryonic skeletal system development
3.62	2.25e-02	GO:0031333	negative regulation of protein complex assembly
3.58	2.10e-04	GO:0048634	regulation of muscle organ development
3.58	6.65e-03	GO:0070507	regulation of microtubule cytoskeleton organization
3.47	3.92e-02	GO:0043244	regulation of protein complex disassembly
3.43	1.42e-04	GO:0048638	regulation of developmental growth
3.20	1.94e-02	GO:0032886	regulation of microtubule-based process
3.17	7.23e-03	GO:0048738	cardiac muscle tissue development
3.06	3.86e-02	GO:0045667	regulation of osteoblast differentiation
3.04	1.43e-02	GO:0008016	regulation of heart contraction
3.02	1.34e-04	GO:0051146	striated muscle cell differentiation

Search:

Show entries

Showing 1 to 20 of 76 entries

Enrichment	P-value	GO Accession	GO Term
4.89	1.97e-03	GO:0005581	collagen
3.96	4.41e-03	GO:0030175	filopodium
3.58	2.09e-06	GO:0030427	site of polarized growth
3.57	4.39e-06	GO:0030426	growth cone
3.46	1.39e-08	GO:0044420	extracellular matrix part
3.45	1.22e-02	GO:0031256	leading edge membrane
3.43	3.57e-03	GO:0030018	Z disc
3.27	4.30e-02	GO:0005913	cell-cell adherens junction
3.11	4.19e-02	GO:0030863	cortical cytoskeleton
3.03	1.16e-02	GO:0031674	I band
2.93	2.41e-03	GO:0014069	postsynaptic density
2.86	3.60e-03	GO:0030027	lamellipodium
2.86	5.93e-03	GO:0005604	basement membrane
2.74	4.76e-04	GO:0030016	myofibril
2.71	2.55e-04	GO:0043292	contractile fiber
2.65	8.04e-03	GO:0016327	apicolateral plasma membrane
2.64	3.57e-03	GO:0044449	contractile fiber part
2.64	1.32e-02	GO:0030017	sarcomere
2.63	3.16e-04	GO:0033267	axon part
2.58	1.85e-02	GO:0043296	apical junction complex

Search:

Show entries

Showing 1 to 20 of 32 entries

Enrichment	P-value	GO Accession	GO Term
11.57	3.91e-02	GO:0008157	protein phosphatase 1 binding
4.54	1.93e-06	GO:0008013	beta-catenin binding
4.39	1.09e-02	GO:0005201	extracellular matrix structural constituent
3.49	6.02e-04	GO:0005178	integrin binding
3.33	4.50e-03	GO:0004714	transmembrane receptor protein tyrosine kinase activity
3.20	4.50e-03	GO:0019902	phosphatase binding
3.08	2.43e-02	GO:0051015	actin filament binding
3.01	6.76e-03	GO:0019199	transmembrane receptor protein kinase activity
2.50	3.44e-02	GO:0008201	heparin binding
2.47	6.25e-09	GO:0003779	actin binding
2.47	2.97e-03	GO:0005539	glycosaminoglycan binding
2.40	1.11e-14	GO:0008092	cytoskeletal protein binding
2.36	3.74e-03	GO:0001871	pattern binding
2.36	3.74e-03	GO:0030247	polysaccharide binding
2.35	2.24e-02	GO:0004713	protein tyrosine kinase activity
2.35	3.12e-02	GO:0005516	calmodulin binding
2.17	2.33e-04	GO:0019901	protein kinase binding
2.08	1.23e-04	GO:0019900	kinase binding
2.03	4.77e-08	GO:0019904	protein domain specific binding
1.99	1.01e-04	GO:0032403	protein complex binding