ISMARA results: HNF4A

Motif ID: HNF4A_NR2F1,2.p2

Gene Symbol	Entrez ID	Gene Name
Hnf4a	15378	hepatic nuclear factor 4, alpha
Nr2f1	13865	nuclear receptor subfamily 2, group F, member 1
Nr2f2	11819	nuclear receptor subfamily 2, group F, member 2

Gene Symbol	Promoter	Pearson corr. coef.	P-value	Plot
Hnf4a	chr2_+_163372889	0.80	1.3e-41	Click!
Nr2f2	chr7_-_77505248	0.27	3.0e-04	Click!
Nr2f1	chr13_-_78338131	-0.12	1.1e-01	Click!

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Promoter	Score	Refseq	Gene Symbol	Gene Name
chr16_+_23146608	66.772	NM_009605	Adipoq	adiponectin, C1Q and collagen domain containing
chr16_+_23146631	65.661		Adipoq	adiponectin, C1Q and collagen domain containing
chr16_+_5007426	62.376		Gm5480	predicted gene 5480
chr2_+_172978566	58.944	NM_011044	Pck1	phosphoenolpyruvate carboxykinase 1, cytosolic
chr3_+_122598292	52.638	NM_007980	Fabp2	fatty acid binding protein 2, intestinal
chr14_-_56377206	49.852		Cideb	cell death-inducing DNA fragmentation factor, alpha subunit-like effector B
chr14_-_56377231	49.796		Cideb	cell death-inducing DNA fragmentation factor, alpha subunit-like effector B
chr14_-_56377278	49.458		Cideb	cell death-inducing DNA fragmentation factor, alpha subunit-like effector B
chr14_-_56377260	49.111	NM_009894	Cideb	cell death-inducing DNA fragmentation factor, alpha subunit-like effector B
chr11_-_73137838	44.509		Aspa	aspartoacylase
chr17_-_43639675	43.356	NM_008585	Mep1a	meprin 1 alpha
chr9_+_46036703	42.983	NM_009692	Apoa1	apolipoprotein A-I
chr18_+_21230844	40.793	NM_008586	Mep1b	meprin 1 beta
chr11_-_77707282	39.019	NM_008952	Pipox	pipecolic acid oxidase
chr12_+_37968225	38.968	NM_178767	Tmem195	transmembrane protein 195
chr9_+_46036788	38.562		Apoa1	apolipoprotein A-I
chr4_-_129851289	37.499		Tinagl1	tubulointerstitial nephritis antigen-like 1
chr9_+_46036799	36.528		Apoa1	apolipoprotein A-I
chr1_+_74455956	35.825	NM_009509	Vil1	villin 1
chr7_+_150659707	34.871		Slc22a18	solute carrier family 22 (organic cation transporter), member 18

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Enrichment	P-value	GO Accession	GO Term
7.56	1.70e-02	GO:0042737	drug catabolic process
6.08	9.67e-03	GO:0046627	negative regulation of insulin receptor signaling pathway
4.91	3.24e-02	GO:0046470	phosphatidylcholine metabolic process
4.91	3.24e-02	GO:0071825	protein-lipid complex subunit organization
4.91	3.24e-02	GO:0071827	plasma lipoprotein particle organization
4.73	9.65e-04	GO:0097006	regulation of plasma lipoprotein particle levels
4.39	7.14e-03	GO:0042439	ethanolamine-containing compound metabolic process
3.93	2.90e-03	GO:0019395	fatty acid oxidation
3.93	2.90e-03	GO:0034440	lipid oxidation
3.88	1.66e-02	GO:0009062	fatty acid catabolic process
3.88	1.66e-02	GO:0043648	dicarboxylic acid metabolic process
3.77	1.16e-02	GO:0042632	cholesterol homeostasis
3.77	1.16e-02	GO:0055092	sterol homeostasis
3.71	4.47e-05	GO:0006641	triglyceride metabolic process
3.60	4.45e-02	GO:0072329	monocarboxylic acid catabolic process
3.48	2.48e-03	GO:0055088	lipid homeostasis
3.47	1.31e-05	GO:0044242	cellular lipid catabolic process
3.42	6.97e-05	GO:0006638	neutral lipid metabolic process
3.37	1.84e-04	GO:0006639	acylglycerol metabolic process
3.18	5.89e-05	GO:0018904	organic ether metabolic process

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Enrichment	P-value	GO Accession	GO Term
6.87	5.76e-03	GO:0042627	chylomicron
6.60	3.03e-05	GO:0034361	very-low-density lipoprotein particle
6.60	3.03e-05	GO:0034385	triglyceride-rich lipoprotein particle
3.71	3.62e-02	GO:0032994	protein-lipid complex
3.71	3.62e-02	GO:0034358	plasma lipoprotein particle
3.60	4.98e-02	GO:0005793	ER-Golgi intermediate compartment
3.48	3.33e-04	GO:0005903	brush border
2.89	1.13e-07	GO:0005759	mitochondrial matrix
2.75	2.36e-04	GO:0005777	peroxisome
2.75	2.36e-04	GO:0042579	microbody
2.61	1.28e-12	GO:0005743	mitochondrial inner membrane
2.58	1.09e-02	GO:0030017	sarcomere
2.51	4.08e-11	GO:0042598	vesicular fraction
2.51	9.87e-11	GO:0005792	microsome
2.48	2.53e-11	GO:0019866	organelle inner membrane
2.37	1.81e-16	GO:0044429	mitochondrial part
2.36	6.87e-05	GO:0016324	apical plasma membrane
2.34	9.59e-12	GO:0031966	mitochondrial membrane
2.32	6.41e-12	GO:0005740	mitochondrial envelope
2.27	4.33e-02	GO:0030016	myofibril

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Showing 1 to 20 of 41 entries

Enrichment	P-value	GO Accession	GO Term
5.82	4.66e-02	GO:0004602	glutathione peroxidase activity
5.14	4.77e-03	GO:0016628	oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor
5.04	8.80e-05	GO:0016712	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen
5.02	2.71e-04	GO:0070330	aromatase activity
4.32	2.68e-05	GO:0016209	antioxidant activity
4.18	7.88e-03	GO:0004601	peroxidase activity
4.18	7.88e-03	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor
3.84	2.25e-05	GO:0033293	monocarboxylic acid binding
3.51	3.02e-02	GO:0005504	fatty acid binding
3.19	1.37e-07	GO:0046906	tetrapyrrole binding
3.12	3.81e-02	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors
3.10	1.72e-06	GO:0020037	heme binding
3.09	1.12e-06	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors
3.07	6.60e-06	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
3.00	4.20e-03	GO:0050660	flavin adenine dinucleotide binding
2.94	2.06e-09	GO:0050662	coenzyme binding
2.93	2.91e-06	GO:0004497	monooxygenase activity
2.83	2.35e-04	GO:0004091	carboxylesterase activity
2.75	1.78e-11	GO:0048037	cofactor binding
2.72	2.18e-04	GO:0009055	electron carrier activity