Motif ID: VSX1,2.p2

Z-value: 0.351


Transcription factors associated with VSX1,2.p2:

Gene SymbolEntrez IDGene Name
VSX1 30813 visual system homeobox 1
VSX2 338917 visual system homeobox 2

Activity-expression correlation:

GenePromoterPearsonP-valuePlot
VSX1chr20_-_250107560.204.6e-01Click!
VSX2chr14_+_737759270.107.2e-01Click!


Activity profile for motif VSX1,2.p2.

activity profile for motif VSX1,2.p2


Sorted Z-values histogram for motif VSX1,2.p2

Sorted Z-values for motif VSX1,2.p2



Network of associatons between targets according to the STRING database.



First level regulatory network of VSX1,2.p2

PNG image of the network

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Top targets:


Promoter Score Refseq Gene Symbol Gene Name
chr12_+_28301399 0.261 NM_018318
CCDC91
coiled-coil domain containing 91
chr10_-_56230953 0.254 NM_001142763
NM_001142764
NM_001142765
NM_001142766
NM_001142767
NM_001142768
NM_001142769
NM_001142770
NM_001142771
NM_001142772
NM_001142773
NM_033056
PCDH15











protocadherin-related 15











chr1_+_100776280 0.248 NM_022049
GPR88
G protein-coupled receptor 88
chr4_+_88790477 0.173 NM_001079911
NM_004407
DMP1

dentin matrix acidic phosphoprotein 1

chr2_+_17861266 0.166 NM_001105569
MSGN1
mesogenin 1
chr20_-_49852353 0.160 NM_020436
SALL4
sal-like 4 (Drosophila)
chr12_-_52016270 0.130 NM_001173467
SP7
Sp7 transcription factor
chrX_-_107221405 0.125 NM_002814
NM_170750
PSMD10

proteasome (prosome, macropain) 26S subunit, non-ATPase, 10

chr10_+_44726635 0.124 NM_001123376
TMEM72
transmembrane protein 72
chr4_+_70831387 0.124 NM_001025104
NM_001890
CSN1S1

casein alpha s1

chr12_+_103677388 0.121 CHST11
carbohydrate (chondroitin 4) sulfotransferase 11
chr14_-_94306104 0.119 NM_173849
GSC
goosecoid homeobox
chr3_-_158695832 0.116 NM_001167917
VEPH1
ventricular zone expressed PH domain homolog 1 (zebrafish)
chr3_+_2528272 0.115 CNTN4
contactin 4
chr8_-_42742729 0.114 NM_004198
CHRNA6
cholinergic receptor, nicotinic, alpha 6
chr7_+_2524022 0.111 NM_002304
LFNG
LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
chr11_+_17697685 0.110 NM_002478
MYOD1
myogenic differentiation 1
chr2_-_190635566 0.103 NM_005259
MSTN
myostatin
chr2_-_80385227 0.100 LRRTM1
leucine rich repeat transmembrane neuronal 1
chr1_-_42549347 0.098


chr3_+_70068440 0.097 NM_000248
NM_001184968
NM_198158
NM_198178
MITF



microphthalmia-associated transcription factor



chr4_-_138673078 0.095 NM_019035
PCDH18
protocadherin 18
chr11_+_59804634 0.091 NM_148975
MS4A4A
membrane-spanning 4-domains, subfamily A, member 4
chr1_+_145892190 0.084 NM_001097616
GPR89C
G protein-coupled receptor 89C
chr3_-_25658829 0.078 TOP2B
topoisomerase (DNA) II beta 180kDa
chr6_+_130381408 0.077 NM_001007102
NM_032438
L3MBTL3

l(3)mbt-like 3 (Drosophila)

chr11_-_117640407 0.077 NM_005797
NM_144765
MPZL2

myelin protein zero-like 2

chr1_+_158426908 0.072 NM_001231
CASQ1
calsequestrin 1 (fast-twitch, skeletal muscle)
chr3_+_182900081 0.071 SOX2OT
SOX2 overlapping transcript (non-protein coding)
chr11_+_112337199 0.068 NM_000615
NM_001076682
NM_181351
NCAM1


neural cell adhesion molecule 1


chr1_-_103269356 0.065 COL11A1
collagen, type XI, alpha 1
chr4_-_90197140 0.060 NM_014883
FAM13A
family with sequence similarity 13, member A
chr1_-_156635879 0.060 NM_001004475
OR10T2
olfactory receptor, family 10, subfamily T, member 2
chr10_+_32896656 0.059 NM_024688
C10orf68
chromosome 10 open reading frame 68
chr6_+_62341966 0.058 NM_001190706
MTRNR2L9
MT-RNR2-like 9
chr21_-_34820916 0.057 NM_203418
RCAN1
regulator of calcineurin 1
chr3_-_69381995 0.055 FRMD4B
FERM domain containing 4B
chr17_+_18027816 0.054 ALKBH5
alkB, alkylation repair homolog 5 (E. coli)
chr2_+_143351536 0.054 NM_001032998
NM_003937
KYNU

kynureninase

chr6_+_155626838 0.053 NM_001001346
CLDN20
claudin 20
chr11_-_128567302 0.051 NM_001142685
ARHGAP32
Rho GTPase activating protein 32
chr5_+_175041069 0.051 NM_022304
HRH2
histamine receptor H2
chr3_-_127810087 0.051 NM_001039783
TXNRD3IT1
thioredoxin reductase 3 intronic transcript 1
chr4_-_138673014 0.051 PCDH18
protocadherin 18
chr10_+_18729518 0.049 NM_201570
CACNB2
calcium channel, voltage-dependent, beta 2 subunit
chr14_+_75058591 0.046 BATF
basic leucine zipper transcription factor, ATF-like
chr5_-_9683462 0.046 NM_019599
TAS2R1
taste receptor, type 2, member 1
chr12_+_15590811 0.046 PTPRO
protein tyrosine phosphatase, receptor type, O
chr8_+_22266256 0.045 PIWIL2
piwi-like 2 (Drosophila)
chr1_+_242582559 0.044 NM_001012970
C1orf100
chromosome 1 open reading frame 100
chr10_-_52315390 0.043 A1CF
APOBEC1 complementation factor
chr2_+_28892366 0.042 NM_001008779
SPDYA
speedy homolog A (Xenopus laevis)
chr12_-_55979413 0.041


chr16_+_54072969 0.041 NM_001127891
MMP2
matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)
chr13_-_33148899 0.040 STARD13
StAR-related lipid transfer (START) domain containing 13
chr11_-_20138445 0.039 NM_001029865
DBX1
developing brain homeobox 1
chr2_-_80384997 0.039 NM_178839
LRRTM1
leucine rich repeat transmembrane neuronal 1
chr6_-_33016561 0.037 NM_002118
HLA-DMB
major histocompatibility complex, class II, DM beta
chr4_-_100284395 0.036 NM_000670
ADH4
alcohol dehydrogenase 4 (class II), pi polypeptide
chr4_-_66218777 0.035 EPHA5
EPH receptor A5
chr3_-_166278969 0.034 NM_001041
SI
sucrase-isomaltase (alpha-glucosidase)
chr14_+_66901237 0.033 EIF2S1
eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
chr8_+_92330691 0.033 NM_052832
NM_134266
SLC26A7

solute carrier family 26, member 7

chr16_+_47965308 0.033 NM_144602
C16orf78
chromosome 16 open reading frame 78
chr4_+_169654742 0.032 NM_001166108
NM_016081
PALLD

palladin, cytoskeletal associated protein

chr11_-_33870411 0.032 NM_005574
LMO2
LIM domain only 2 (rhombotin-like 1)
chr4_-_164614335 0.032 NM_032136
TKTL2
transketolase-like 2
chr6_-_50039776 0.030 NM_001037499
DEFB114
defensin, beta 114
chr20_+_58004811 0.030 NM_021810
CDH26
cadherin 26
chr14_-_59264044 0.030 NM_206857
RTN1
reticulon 1
chr4_-_123596921 0.030 NM_000586
IL2
interleukin 2
chr8_+_9450832 0.030 TNKS
tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase
chr6_-_166960690 0.030 NM_021135
RPS6KA2
ribosomal protein S6 kinase, 90kDa, polypeptide 2
chr2_+_189547358 0.030 COL3A1
collagen, type III, alpha 1
chr3_-_102522093 0.029 NM_016247
IMPG2
interphotoreceptor matrix proteoglycan 2
chr2_+_128119908 0.029 NM_001161415
NM_001161416
NM_001161417
NM_005291
GPR17



G protein-coupled receptor 17



chr2_-_65013070 0.029 LOC400958
hypothetical LOC400958
chr8_+_9450800 0.029 TNKS
tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase
chr11_+_86710076 0.029 TMEM135
transmembrane protein 135
chr15_-_40236061 0.029 NM_213600
PLA2G4F
phospholipase A2, group IVF
chrX_+_107174855 0.028 NM_001170553
NM_182607
VSIG1

V-set and immunoglobulin domain containing 1

chr15_+_97990705 0.028 NM_001130928
MEF2A
myocyte enhancer factor 2A
chrX_+_79562601 0.028 NM_152630
FAM46D
family with sequence similarity 46, member D
chr9_+_66197108 0.028


chr11_+_59920062 0.027 NM_001079692
NM_032597
MS4A14

membrane-spanning 4-domains, subfamily A, member 14

chr3_+_110024234 0.026 NM_016388
TRAT1
T cell receptor associated transmembrane adaptor 1
chr1_-_156013487 0.026 NM_030764
FCRL2
Fc receptor-like 2
chr11_-_117640078 0.025


chr1_-_153916221 0.025 NM_001198899
YY1AP1
YY1 associated protein 1
chr12_+_100394787 0.025 NM_152323
SPIC
Spi-C transcription factor (Spi-1/PU.1 related)
chr10_-_50066386 0.025 NM_001010863
C10orf128
chromosome 10 open reading frame 128
chr10_-_48036698 0.025 NM_016204
GDF2
growth differentiation factor 2
chr4_-_169476391 0.024 NM_017631
DDX60
DEAD (Asp-Glu-Ala-Asp) box polypeptide 60
chr14_+_31868229 0.024 NM_004274
AKAP6
A kinase (PRKA) anchor protein 6
chr21_-_36836767 0.024 NM_001146078
CLDN14
claudin 14
chr11_-_17147863 0.024 NM_002645
PIK3C2A
phosphoinositide-3-kinase, class 2, alpha polypeptide
chr6_+_155579788 0.024 NM_001010927
TIAM2
T-cell lymphoma invasion and metastasis 2
chr14_+_101345878 0.023 NM_002719
NM_178586
NM_178587
PPP2R5C


protein phosphatase 2, regulatory subunit B', gamma


chr9_-_205892 0.023 NM_152569
C9orf66
chromosome 9 open reading frame 66
chr6_+_55300225 0.023 NM_207410
GFRAL
GDNF family receptor alpha like
chr16_+_6763810 0.023 NM_001142334
RBFOX1
RNA binding protein, fox-1 homolog (C. elegans) 1
chr6_-_52818851 0.022 NM_153699
GSTA5
glutathione S-transferase alpha 5
chrX_-_23835868 0.022 NM_024122
APOO
apolipoprotein O
chr11_-_5279750 0.022 NM_033179
OR51B4
olfactory receptor, family 51, subfamily B, member 4
chr3_+_2117246 0.022 NM_175607
CNTN4
contactin 4
chr3_-_158704056 0.022 NM_001167915
NM_001167916
VEPH1

ventricular zone expressed PH domain homolog 1 (zebrafish)

chr16_-_66535457 0.022 NM_000229
LCAT
lecithin-cholesterol acyltransferase
chr7_+_1239078 0.021 NM_001080461
UNCX
UNC homeobox
chr2_-_20390601 0.021 NM_015317
PUM2
pumilio homolog 2 (Drosophila)
chr15_-_70350609 0.021 NM_020214
PARP6
poly (ADP-ribose) polymerase family, member 6
chr5_-_24535386 0.020 NM_001190450
CDH10
cadherin 10, type 2 (T2-cadherin)
chrX_+_7147471 0.020 NM_000351
STS
steroid sulfatase (microsomal), isozyme S
chr7_+_141457977 0.020 LOC93432
maltase-glucoamylase-like pseudogene
chr7_+_116447527 0.019 ST7
suppression of tumorigenicity 7
chr10_-_92671005 0.018 NM_014391
ANKRD1
ankyrin repeat domain 1 (cardiac muscle)
chr6_-_112033752 0.018 TRAF3IP2
TRAF3 interacting protein 2
chr4_+_5577783 0.018 NM_005750
C4orf6
chromosome 4 open reading frame 6
chr11_-_117640166 0.017 MPZL2
myelin protein zero-like 2
chr1_-_150653351 0.017 NM_016190
CRNN
cornulin
chr11_-_30910074 0.017 NM_020869
DCDC5
doublecortin domain containing 5
chr6_+_132901119 0.016 NM_175057
TAAR9
trace amine associated receptor 9 (gene/pseudogene)
chr1_+_144595224 0.016 NM_001097616
GPR89C
G protein-coupled receptor 89C
chr8_-_17787342 0.016 FGL1
fibrinogen-like 1
chr11_-_55815113 0.015 NM_001005199
OR8H1
olfactory receptor, family 8, subfamily H, member 1
chr18_+_59705918 0.015 NM_001143818
NM_002575
SERPINB2

serpin peptidase inhibitor, clade B (ovalbumin), member 2

chr1_+_28458546 0.015 NM_031459
SESN2
sestrin 2
chr19_+_54708302 0.015 FCGRT
Fc fragment of IgG, receptor, transporter, alpha
chr1_-_198643885 0.014 ZNF281
zinc finger protein 281
chr8_+_23483422 0.014 SLC25A37
solute carrier family 25, member 37
chr6_+_64289585 0.014 PTP4A1
protein tyrosine phosphatase type IVA, member 1
chr1_+_28134090 0.014 NM_001009568
NM_014474
SMPDL3B

sphingomyelin phosphodiesterase, acid-like 3B

chr17_-_36165050 0.014 NM_181534
KRT25
keratin 25
chr7_-_99612757 0.014 NM_152742
GPC2
glypican 2
chr10_-_52315436 0.014 NM_001198818
NM_001198819
NM_001198820
NM_014576
NM_138932
NM_138933
A1CF





APOBEC1 complementation factor





chr3_-_25654659 0.013 TOP2B
topoisomerase (DNA) II beta 180kDa
chr13_+_47948586 0.013 RB1
retinoblastoma 1
chr1_-_27825633 0.013 NM_001042729
FGR
Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog
chr14_-_106249999 0.013 IGHA1
immunoglobulin heavy constant alpha 1
chr12_+_91620749 0.012 NM_001037671
NM_001178097
C12orf74

chromosome 12 open reading frame 74

chr7_+_113853790 0.012 NM_001172767
NM_148899
FOXP2

forkhead box P2

chr3_-_48634192 0.012 NM_001008269
TMEM89
transmembrane protein 89
chr17_-_71448700 0.012 NM_001080542
FBF1
Fas (TNFRSF6) binding factor 1
chr15_-_64644758 0.012 NM_207338
LCTL
lactase-like
chr7_+_101810018 0.012


chr1_+_175406685 0.011 FAM5B
family with sequence similarity 5, member B
chr3_-_168674502 0.011 NM_006217
SERPINI2
serpin peptidase inhibitor, clade I (pancpin), member 2
chr1_-_230717850 0.011 NM_020808
SIPA1L2
signal-induced proliferation-associated 1 like 2
chr13_-_40491405 0.011 ELF1
E74-like factor 1 (ets domain transcription factor)
chr22_+_39789945 0.011


chr21_-_30642794 0.011 NM_181624
KRTAP23-1
keratin associated protein 23-1
chr17_+_12510030 0.011 MYOCD
myocardin
chr7_-_44547382 0.010 NM_001101648
NM_013389
NPC1L1

NPC1 (Niemann-Pick disease, type C1, gene)-like 1

chr3_+_113200696 0.010 NM_001008273
TAGLN3
transgelin 3
chr6_+_160462852 0.010 NM_003057
NM_153187
SLC22A1

solute carrier family 22 (organic cation transporter), member 1

chr12_-_15706340 0.010 EPS8
epidermal growth factor receptor pathway substrate 8
chr9_+_131937163 0.009 GPR107
G protein-coupled receptor 107
chr10_-_98311813 0.009 TM9SF3
transmembrane 9 superfamily member 3
chr5_-_56814310 0.009 NM_001017992
ACTBL2
actin, beta-like 2
chr16_-_20246309 0.009 NM_001007240
NM_001007241
NM_001007242
NM_001502
GP2



glycoprotein 2 (zymogen granule membrane)



chr4_+_74499651 0.009 ALB
albumin
chr6_+_28425666 0.009 NM_024493
ZKSCAN3
zinc finger with KRAB and SCAN domains 3
chr1_+_198263352 0.008 NM_003822
NM_205860
NR5A2

nuclear receptor subfamily 5, group A, member 2

chr11_-_4371463 0.008 NM_003141
TRIM21
tripartite motif containing 21
chr8_-_52884456 0.008 NM_144651
PXDNL
peroxidasin homolog (Drosophila)-like
chr8_-_134156437 0.008 SLA
Src-like-adaptor
chr11_+_89403921 0.008 NM_001195234
TRIM49
TRIM49L2
tripartite motif containing 49
tripartite motif containing 49-like 2
chr19_-_45611110 0.008 NM_020956
NM_181882
PRX

periaxin

chr4_-_57242492 0.007 NM_001145460
NM_032495
NM_139212
HOPX


HOP homeobox


chr7_-_30032649 0.007 NM_017946
FKBP14
FK506 binding protein 14, 22 kDa
chr1_+_196874839 0.007 PTPRC
protein tyrosine phosphatase, receptor type, C
chr1_-_45862225 0.007 NM_001114938
NM_001190182
CCDC17

coiled-coil domain containing 17

chr5_-_111119846 0.007 NM_001142483
C5orf13
chromosome 5 open reading frame 13
chr6_-_166960649 0.007 RPS6KA2
ribosomal protein S6 kinase, 90kDa, polypeptide 2
chr10_+_5126589 0.007 AKR1C3
aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)
chr4_+_74520796 0.006 NM_001134
AFP
alpha-fetoprotein
chr19_-_51829778 0.006 NM_033258
GNG8
guanine nucleotide binding protein (G protein), gamma 8
chr6_+_161043214 0.006 NM_000301
NM_001168338
PLG

plasminogen

chr12_+_18305740 0.006 NM_004570
PIK3C2G
phosphoinositide-3-kinase, class 2, gamma polypeptide
chr15_-_53349775 0.005 NM_183234
NM_004580
RAB27A

RAB27A, member RAS oncogene family

chr9_-_21067804 0.005 NM_002176
IFNB1
interferon, beta 1, fibroblast
chr7_+_50318801 0.005 IKZF1
IKAROS family zinc finger 1 (Ikaros)
chrX_-_138617994 0.005 NM_001099855
NM_001171876
MCF2

MCF.2 cell line derived transforming sequence

chrX_+_43400350 0.005 NM_000240
MAOA
monoamine oxidase A
chr19_+_56766342 0.005 NM_007147
ZNF175
zinc finger protein 175
chr6_-_112034166 0.005 NM_001164281
NM_147686
TRAF3IP2

TRAF3 interacting protein 2

chr3_-_173911467 0.005 NM_001146276
NM_001146277
NM_001146278
NM_020792
NCEH1



neutral cholesterol ester hydrolase 1



chr2_+_108571177 0.005 NM_004987
LIMS1
LIM and senescent cell antigen-like domains 1
chr3_+_99350859 0.004 NM_001005514
OR5H14
olfactory receptor, family 5, subfamily H, member 14
chr3_+_154362726 0.004 RAP2B
RAP2B, member of RAS oncogene family
chr6_+_37511383 0.004


chr16_+_4322225 0.004 NM_032575
GLIS2
GLIS family zinc finger 2
chr10_+_5126613 0.004 AKR1C3
aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)
chr12_-_55614311 0.004 NM_148897
SDR9C7
short chain dehydrogenase/reductase family 9C, member 7
chr1_-_108032645 0.004 NM_001079874
VAV3
vav 3 guanine nucleotide exchange factor
chr1_+_220977180 0.004 NM_207468
FAM177B
family with sequence similarity 177, member B
chr8_-_86477585 0.003 NM_001128829
NM_001128830
NM_001128831
NM_001738
CA1



carbonic anhydrase I



chr16_-_71650034 0.003 NM_001164766
ZFHX3
zinc finger homeobox 3
chr4_+_74493331 0.003 ALB
albumin
chr16_+_31178812 0.003 ITGAM
integrin, alpha M (complement component 3 receptor 3 subunit)
chr1_-_23998515 0.003 NM_001127621
GALE
UDP-galactose-4-epimerase

Gene Ontology Analysis

Gene overrepresentation in process category:

enrichment   p-value GO term description
4.17 2.74e-02 GO:0016337 cell-cell adhesion

Nothing significant found in compartment category.

Nothing significant found in function category.