ISMARA results: bHLH

Motif ID: bHLH_family.p2

Gene Symbol	Entrez ID	Gene Name
ARNTL	406	aryl hydrocarbon receptor nuclear translocator-like
ARNTL2	56938	aryl hydrocarbon receptor nuclear translocator-like 2
CLOCK	9575	clock homolog (mouse)
HES6	55502	hairy and enhancer of split 6 (Drosophila)
HEY1	23462	hairy/enhancer-of-split related with YRPW motif 1
HEY2	23493	hairy/enhancer-of-split related with YRPW motif 2
HEYL	26508	hairy/enhancer-of-split related with YRPW motif-like
ID1	3397	inhibitor of DNA binding 1, dominant negative helix-loop-helix protein
MITF	4286	microphthalmia-associated transcription factor
MLXIPL	51085	MLX interacting protein-like
MNT	4335	MAX binding protein
MXD3	83463	MAX dimerization protein 3
MXD4	10608	MAX dimerization protein 4
MXI1	4601	MAX interactor 1
NPAS2	4862	neuronal PAS domain protein 2
OLIG1	116448	oligodendrocyte transcription factor 1
OLIG2	10215	oligodendrocyte lineage transcription factor 2
TFE3	7030	transcription factor binding to IGHM enhancer 3

Gene	Promoter	Pearson	P-value	Plot
ID1	chr20_+_29656744	0.62	9.7e-03	Click!
MLXIPL	chr7_-_72676750	0.62	1.0e-02	Click!
MITF	chr3_+_69895651	-0.57	2.0e-02	Click!
ARNTL	chr11_+_13255905	-0.53	3.6e-02	Click!
HES6	chr2_-_238813365	0.44	8.9e-02	Click!
MXD4	chr4_-_2233504	-0.44	9.0e-02	Click!
HEYL	chr1_-_39877928	-0.37	1.5e-01	Click!
NPAS2	chr2_+_100802923	0.36	1.7e-01	Click!
ARNTL2	chr12_+_27377034	-0.33	2.1e-01	Click!
CLOCK	chr4_-_56107725	-0.29	2.8e-01	Click!
TFE3	chrX_-_48787876	-0.26	3.3e-01	Click!
HEY2	chr6_+_126112588	0.26	3.3e-01	Click!
MNT	chr17_-_2250967	-0.21	4.2e-01	Click!
HEY1	chr8_-_80842452	-0.19	4.8e-01	Click!
OLIG2	chr21_+_33320080	0.16	5.6e-01	Click!
MXI1	chr10_+_111959978	-0.11	6.8e-01	Click!
OLIG1	chr21_+_33364420	-0.10	7.2e-01	Click!
MXD3	chr5_-_176671437	0.07	7.9e-01	Click!

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Showing 1 to 20 of 200 entries

Promoter	Score	Refseq	Gene Symbol	Gene Name
chr8_+_120289735	2.091	NM_052886	MAL2	mal, T-cell differentiation protein 2 (gene/pseudogene)
chr17_-_73636362	2.013		TMC6	transmembrane channel-like 6
chr6_-_47385313	1.553		TNFRSF21	tumor necrosis factor receptor superfamily, member 21
chr12_-_56432385	1.488	NM_000075	CDK4	cyclin-dependent kinase 4
chr1_-_12599934	1.463	NM_004753	DHRS3	dehydrogenase/reductase (SDR family) member 3
chr11_+_384199	1.435	NM_007183	PKP3	plakophilin 3
chr6_-_33493792	1.418		CUTA	cutA divalent cation tolerance homolog (E. coli)
chr19_+_10626106	1.344		ILF3	interleukin enhancer binding factor 3, 90kDa
chr2_+_218992053	1.309	NM_007127	VIL1	villin 1
chr12_-_61614930	1.305	NM_020700	PPM1H	protein phosphatase, Mg2+/Mn2+ dependent, 1H
chr11_+_384238	1.302		PKP3	plakophilin 3
chr5_-_133734616	1.269		CDKL3	cyclin-dependent kinase-like 3
chr16_-_5023934	1.266	NM_016256	NAGPA	N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase
chr2_-_208342296	1.266	NM_003468	FZD5	frizzled homolog 5 (Drosophila)
chr8_+_95722448	1.250		ESRP1	epithelial splicing regulatory protein 1
chr6_+_143423656	1.244	NM_016108	AIG1	androgen-induced 1
chrX_+_152562013	1.240		DUSP9	dual specificity phosphatase 9
chr12_-_61615124	1.221		PPM1H	protein phosphatase, Mg2+/Mn2+ dependent, 1H
chr11_+_76171780	1.206	NM_015516	TSKU	tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)
chr1_+_3360880	1.187	NM_014448	ARHGEF16	Rho guanine nucleotide exchange factor (GEF) 16

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enrichment	p-value	GO term	description
3.16	9.00e-03	GO:0015682	ferric iron transport
3.16	9.00e-03	GO:0033572	transferrin transport
1.33	5.55e-07	GO:0010467	gene expression
1.32	3.79e-02	GO:0006357	regulation of transcription from RNA polymerase II promoter
1.29	1.18e-04	GO:0016070	RNA metabolic process
1.25	1.07e-02	GO:0034645	cellular macromolecule biosynthetic process
1.24	3.26e-02	GO:0009059	macromolecule biosynthetic process
1.23	1.91e-03	GO:0090304	nucleic acid metabolic process
1.22	2.69e-04	GO:0006139	nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
1.21	3.77e-05	GO:0034641	cellular nitrogen compound metabolic process
1.21	5.36e-05	GO:0006807	nitrogen compound metabolic process
1.21	2.77e-03	GO:0044249	cellular biosynthetic process
1.20	8.93e-08	GO:0044260	cellular macromolecule metabolic process
1.20	1.08e-02	GO:0009058	biosynthetic process
1.19	4.29e-08	GO:0043170	macromolecule metabolic process
1.18	3.86e-11	GO:0044238	primary metabolic process
1.18	3.00e-10	GO:0044237	cellular metabolic process
1.17	1.05e-02	GO:0048856	anatomical structure development
1.16	2.13e-11	GO:0008152	metabolic process
1.11	1.67e-13	GO:0009987	cellular process

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Showing 1 to 20 of 27 entries

enrichment	p-value	GO term	description
3.12	1.24e-02	GO:0044452	nucleolar part
2.00	2.37e-02	GO:0042470	melanosome
2.00	2.37e-02	GO:0048770	pigment granule
1.57	1.01e-05	GO:0005730	nucleolus
1.53	1.16e-02	GO:0005773	vacuole
1.40	2.33e-02	GO:0030529	ribonucleoprotein complex
1.29	3.27e-06	GO:0031981	nuclear lumen
1.27	2.36e-07	GO:0031974	membrane-enclosed lumen
1.27	6.89e-07	GO:0043233	organelle lumen
1.27	1.22e-06	GO:0070013	intracellular organelle lumen
1.27	1.63e-06	GO:0044428	nuclear part
1.27	2.24e-03	GO:0005654	nucleoplasm
1.20	8.81e-03	GO:0005829	cytosol
1.18	3.40e-03	GO:0043228	non-membrane-bounded organelle
1.18	3.40e-03	GO:0043232	intracellular non-membrane-bounded organelle
1.16	1.73e-07	GO:0044422	organelle part
1.16	2.24e-07	GO:0044446	intracellular organelle part
1.15	5.97e-03	GO:0032991	macromolecular complex
1.14	4.60e-06	GO:0044444	cytoplasmic part
1.13	7.85e-10	GO:0005737	cytoplasm

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Showing 1 to 5 of 5 entries

enrichment	p-value	GO term	description
1.38	8.54e-03	GO:0043565	sequence-specific DNA binding
1.33	1.33e-03	GO:0030528	transcription regulator activity
1.19	9.70e-03	GO:0000166	nucleotide binding
1.15	2.16e-10	GO:0005515	protein binding
1.06	5.87e-05	GO:0005488	binding