Motif ID: LHX3,4.p2

Z-value: 0.626


Transcription factors associated with LHX3,4.p2:

Gene SymbolEntrez IDGene Name
LHX3 8022 LIM homeobox 3
LHX4 89884 LIM homeobox 4



Activity profile for motif LHX3,4.p2.

activity profile for motif LHX3,4.p2


Sorted Z-values histogram for motif LHX3,4.p2

Sorted Z-values for motif LHX3,4.p2



Network of associatons between targets according to the STRING database.



First level regulatory network of LHX3,4.p2

PNG image of the network

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Top targets:


Promoter Score Refseq Gene Symbol Gene Name
chr1_+_62835759 1.286 NM_014495
ANGPTL3
angiopoietin-like 3
chr15_+_22832198 1.202 SNRPN
small nuclear ribonucleoprotein polypeptide N
chr7_+_90177082 1.040 CDK14
cyclin-dependent kinase 14
chr6_+_73133152 1.020 NM_001168411
RIMS1
regulating synaptic membrane exocytosis 1
chr5_+_6799100 0.960 NM_001171806
PAPD7
PAP associated domain containing 7
chr4_-_120462705 0.935 NM_000134
FABP2
fatty acid binding protein 2, intestinal
chr15_+_32048380 0.926 NM_012125
CHRM5
cholinergic receptor, muscarinic 5
chr9_+_674193 0.905


chr5_-_160044844 0.879 ATP10B
ATPase, class V, type 10B
chr6_+_152053323 0.869 NM_001122742
ESR1
estrogen receptor 1
chr7_+_90176647 0.860 NM_012395
CDK14
cyclin-dependent kinase 14
chr6_+_47857733 0.855 NM_181744
OPN5
opsin 5
chr2_-_175170674 0.826 WIPF1
WAS/WASL interacting protein family, member 1
chr10_+_102212787 0.772 NM_003393
WNT8B
wingless-type MMTV integration site family, member 8B
chr1_-_58920315 0.724


chr1_-_195818927 0.709 DENND1B
DENN/MADD domain containing 1B
chr6_-_66346417 0.698 NM_198283
EYS
eyes shut homolog (Drosophila)
chr8_+_32905027 0.696


chr4_+_74505710 0.695


chr17_-_1195096 0.677 PAFAH1B1
platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)
chr3_+_99334230 0.649 NM_001005338
OR5H1
olfactory receptor, family 5, subfamily H, member 1
chr5_-_124108672 0.625 NM_020747
ZNF608
zinc finger protein 608
chr2_+_102456193 0.622 NM_001011552
SLC9A4
solute carrier family 9 (sodium/hydrogen exchanger), member 4
chr3_-_69212192 0.583 NM_003968
NM_198195
UBA3

ubiquitin-like modifier activating enzyme 3

chr12_-_41269679 0.555 NM_153026
PRICKLE1
prickle homolog 1 (Drosophila)
chr11_-_89181390 0.537 NM_020358
TRIM49
tripartite motif containing 49
chr4_-_170314382 0.537 SH3RF1
SH3 domain containing ring finger 1
chrX_-_138875342 0.536 NM_001013403
CXorf66
chromosome X open reading frame 66
chr2_+_135312655 0.534 NM_138326
ACMSD
aminocarboxymuconate semialdehyde decarboxylase
chr15_-_75364387 0.534 NM_024776
PEAK1
NKF3 kinase family member
chr17_-_9635325 0.521 NM_001105571
DHRS7C
dehydrogenase/reductase (SDR family) member 7C
chr10_-_50066386 0.506 NM_001010863
C10orf128
chromosome 10 open reading frame 128
chrX_-_142432884 0.494 NM_001009609
SPANXN3
SPANX family, member N3
chr14_-_46882144 0.488 NM_182830
MDGA2
MAM domain containing glycosylphosphatidylinositol anchor 2
chr4_+_123311207 0.484 NM_015312
KIAA1109
KIAA1109
chr11_+_55899675 0.480 NM_001005204
NM_001013356
OR8U1
OR8U8
olfactory receptor, family 8, subfamily U, member 1
olfactory receptor, family 8, subfamily U, member 8
chr3_-_135131207 0.476 NM_025041
C3orf36
chromosome 3 open reading frame 36
chr2_-_215711313 0.468 NM_173076
ABCA12
ATP-binding cassette, sub-family A (ABC1), member 12
chr12_+_79362256 0.467 NM_001145026
PTPRQ
protein tyrosine phosphatase, receptor type, Q
chr1_+_157526127 0.467 NM_002001
FCER1A
Fc fragment of IgE, high affinity I, receptor for; alpha polypeptide
chr21_+_24722913 0.463 FLJ42200
FLJ42200 protein
chr11_-_88420687 0.462 NM_001143831
GRM5
glutamate receptor, metabotropic 5
chr4_+_78172966 0.456 SEPT11
septin 11
chr1_+_42773146 0.451 NM_001080850
CCDC30
coiled-coil domain containing 30
chr6_+_53043729 0.451 NM_012347
FBXO9
F-box protein 9
chr21_-_26294332 0.446 APP
amyloid beta (A4) precursor protein
chr2_-_99238001 0.445 NM_175735
LYG2
lysozyme G-like 2
chr11_-_117628211 0.444 NM_198275
MPZL3
myelin protein zero-like 3
chr1_-_245942679 0.442 NM_001005286
OR6F1
olfactory receptor, family 6, subfamily F, member 1
chr4_+_78651929 0.441 NM_006419
CXCL13
chemokine (C-X-C motif) ligand 13
chr22_+_42726423 0.438 NM_001003828
PARVB
parvin, beta
chr1_-_143708467 0.429 NM_001195260
PDE4DIP
phosphodiesterase 4D interacting protein
chr7_-_87180499 0.429 NM_000927
ABCB1
ATP-binding cassette, sub-family B (MDR/TAP), member 1
chr1_-_246912227 0.428 NM_001004734
OR14I1
olfactory receptor, family 14, subfamily I, member 1
chr11_-_102081654 0.428 NM_022122
MMP27
matrix metallopeptidase 27
chr4_+_88748704 0.423 NM_014208
DSPP
dentin sialophosphoprotein
chr11_-_57964221 0.423 NM_001004733
OR5B12
olfactory receptor, family 5, subfamily B, member 12
chr2_+_216695062 0.417 XRCC5
X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)
chr12_-_10870134 0.411 NM_023921
TAS2R10
taste receptor, type 2, member 10
chr1_+_156991133 0.411 NM_001005184
OR6K6
olfactory receptor, family 6, subfamily K, member 6
chr3_+_73193499 0.410 NM_018029
EBLN2
endogenous Borna-like N element-2
chr6_+_55300225 0.407 NM_207410
GFRAL
GDNF family receptor alpha like
chr2_-_98646367 0.403 NM_001160154
MGAT4A
mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A
chr2_-_56266408 0.403 LOC100129434
hypothetical LOC100129434
chr18_+_59767567 0.392 NM_001123366
HMSD
histocompatibility (minor) serpin domain containing
chr4_+_71298187 0.392 NM_021225
PROL1
proline rich, lacrimal 1
chrX_-_10761729 0.383 NM_033290
MID1
midline 1 (Opitz/BBB syndrome)
chr17_+_63338500 0.380 BPTF
bromodomain PHD finger transcription factor
chr6_-_66473790 0.378 NM_001142800
NM_001142801
EYS

eyes shut homolog (Drosophila)

chr11_+_61794205 0.377 NM_002411
SCGB2A2
secretoglobin, family 2A, member 2
chr11_-_62668268 0.375 NM_001136506
SLC22A24
solute carrier family 22, member 24
chr13_+_47948586 0.370 RB1
retinoblastoma 1
chr11_+_59979857 0.359 NM_021950
NM_152866
MS4A1

membrane-spanning 4-domains, subfamily A, member 1

chr6_+_55147029 0.359 NM_001526
HCRTR2
hypocretin (orexin) receptor 2
chr11_-_57947358 0.359 NM_001005566
OR5B2
olfactory receptor, family 5, subfamily B, member 2
chr12_-_52939636 0.354 NM_001127321
CBX5
chromobox homolog 5
chr2_-_166638376 0.352 NM_001165963
NM_001165964
NM_006920
SCN1A


sodium channel, voltage-gated, type I, alpha subunit


chr1_-_92725017 0.352 NM_005263
GFI1
growth factor independent 1 transcription repressor
chr8_+_54926920 0.352 NM_170587
RGS20
regulator of G-protein signaling 20
chr3_-_78749633 0.351 ROBO1
roundabout, axon guidance receptor, homolog 1 (Drosophila)
chr3_-_121065112 0.350


chr1_-_103269356 0.350 COL11A1
collagen, type XI, alpha 1
chr13_-_98708549 0.349 NM_001098200
NM_005292
GPR18

G protein-coupled receptor 18

chr9_+_4829763 0.348 RCL1
RNA terminal phosphate cyclase-like 1
chr9_-_21295311 0.342 NM_002169
IFNA5
interferon, alpha 5
chr5_+_127012611 0.341 NM_001048252
CTXN3
cortexin 3
chr21_-_35174742 0.340 RUNX1
runt-related transcription factor 1
chr1_+_242281199 0.338 ZNF238
zinc finger protein 238
chr7_+_37689903 0.335


chr10_-_48426868 0.335 NM_001042357
NM_001042389
PTPN20B
PTPN20A
protein tyrosine phosphatase, non-receptor type 20B
protein tyrosine phosphatase, non-receptor type 20A
chr8_+_17440664 0.327 NM_001164771
NM_003046
SLC7A2

solute carrier family 7 (cationic amino acid transporter, y+ system), member 2

chr11_-_30910074 0.325 NM_020869
DCDC5
doublecortin domain containing 5
chr9_+_104797413 0.325 NM_001340
CYLC2
cylicin, basic protein of sperm head cytoskeleton 2
chr1_-_230717850 0.324 NM_020808
SIPA1L2
signal-induced proliferation-associated 1 like 2
chr16_+_2593351 0.324 LOC652276
hypothetical LOC652276
chr3_+_142525744 0.322 NM_001080412
ZBTB38
zinc finger and BTB domain containing 38
chr12_+_54172413 0.322 NM_001005519
OR6C68
olfactory receptor, family 6, subfamily C, member 68
chr14_+_66901237 0.321 EIF2S1
eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
chr11_+_22646229 0.319 NM_177553
GAS2
growth arrest-specific 2
chr3_-_166278969 0.319 NM_001041
SI
sucrase-isomaltase (alpha-glucosidase)
chr17_-_61655915 0.318 NM_000042
APOH
apolipoprotein H (beta-2-glycoprotein I)
chr12_-_9123126 0.317 A2M
alpha-2-macroglobulin
chr5_+_156628929 0.312 NM_014376
CYFIP2
cytoplasmic FMR1 interacting protein 2
chr2_+_170074457 0.307 NM_006063
KBTBD10
kelch repeat and BTB (POZ) domain containing 10
chr6_+_29663661 0.307 NM_007160
OR2H2
olfactory receptor, family 2, subfamily H, member 2
chr10_+_18729518 0.303 NM_201570
CACNB2
calcium channel, voltage-dependent, beta 2 subunit
chr9_-_28709302 0.296 NM_152570
LINGO2
leucine rich repeat and Ig domain containing 2
chr10_+_5228756 0.294 NM_001818
AKR1C4
aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4)
chr15_+_70477707 0.294 NM_001080462
TMEM202
transmembrane protein 202
chr14_-_94669547 0.288 NM_001195573
DICER1
dicer 1, ribonuclease type III
chr18_-_49944986 0.285 MBD2
methyl-CpG binding domain protein 2
chr11_-_5657947 0.284 TRIM5
tripartite motif containing 5
chr9_-_98580148 0.283 NM_014930
ZNF510
zinc finger protein 510
chr9_-_137671206 0.283 NM_182974
GLT6D1
glycosyltransferase 6 domain containing 1
chr11_-_114593838 0.280 CADM1
cell adhesion molecule 1
chr11_-_123758448 0.279 NM_001005468
OR8B2
olfactory receptor, family 8, subfamily B, member 2
chr11_-_124478414 0.279 NM_001080546
TMEM218
transmembrane protein 218
chr20_-_7869068 0.274 NM_017545
HAO1
hydroxyacid oxidase (glycolate oxidase) 1
chr7_-_36730525 0.274 NM_001177506
NM_001177507
NM_001637
AOAH


acyloxyacyl hydrolase (neutrophil)


chr7_-_7724762 0.273 NM_002947
RPA3
replication protein A3, 14kDa
chr14_+_55148488 0.272 KTN1
kinectin 1 (kinesin receptor)
chr3_-_110155237 0.272 NM_005459
GUCA1C
guanylate cyclase activator 1C
chr20_-_18425811 0.269 NM_006606
RBBP9
retinoblastoma binding protein 9
chr8_-_7207899 0.266 NM_001164457
ZNF705G
zinc finger protein 705G
chr6_-_79732391 0.264 PHIP
pleckstrin homology domain interacting protein
chr1_+_246682699 0.263 NM_001004136
OR2T2
olfactory receptor, family 2, subfamily T, member 2
chr2_+_137464931 0.262 NM_001080427
THSD7B
thrombospondin, type I, domain containing 7B
chr2_+_172530120 0.261 HAT1
histone acetyltransferase 1
chr5_-_137502975 0.261 NM_003551
NME5
non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)
chr1_-_188713324 0.257 NM_199051
FAM5C
family with sequence similarity 5, member C
chr5_-_145232723 0.257 NM_001080516
GRXCR2
glutaredoxin, cysteine rich 2
chr9_-_74757735 0.257 NM_000689
ALDH1A1
aldehyde dehydrogenase 1 family, member A1
chr12_+_8499788 0.256 NM_001007033
CLEC6A
C-type lectin domain family 6, member A
chr12_-_9651748 0.256 NM_002258
KLRB1
killer cell lectin-like receptor subfamily B, member 1
chr12_+_14429499 0.255 ATF7IP
activating transcription factor 7 interacting protein
chr14_+_28311740 0.253 C14orf23
chromosome 14 open reading frame 23
chr9_-_4142182 0.252 NM_152629
GLIS3
GLIS family zinc finger 3
chr12_-_25041639 0.252 NM_001101339
C12orf77
chromosome 12 open reading frame 77
chr4_+_169654742 0.250 NM_001166108
NM_016081
PALLD

palladin, cytoskeletal associated protein

chr11_+_55776251 0.249 NM_001004747
OR5T3
olfactory receptor, family 5, subfamily T, member 3
chr7_+_106897737 0.248 NM_005295
GPR22
G protein-coupled receptor 22
chr7_-_30032649 0.248 NM_017946
FKBP14
FK506 binding protein 14, 22 kDa
chr21_-_30460841 0.248 NM_012131
CLDN17
claudin 17
chr13_-_44673174 0.247 NM_198404
KCTD4
potassium channel tetramerisation domain containing 4
chr20_-_49747397 0.247 ATP9A
ATPase, class II, type 9A
chrX_-_131989963 0.246 NM_031907
USP26
ubiquitin specific peptidase 26
chr19_-_56612653 0.246 NM_001171156
NM_001171157
NM_001171158
NM_001171159
NM_001171160
NM_001171161
NM_033130
SIGLEC10






sialic acid binding Ig-like lectin 10






chr4_+_109033868 0.246 NM_001136257
NM_152621
SGMS2

sphingomyelin synthase 2

chr1_+_242281175 0.246 NM_205768
ZNF238
zinc finger protein 238
chr11_-_57883117 0.245 NM_001005489
OR5B17
olfactory receptor, family 5, subfamily B, member 17
chr2_-_224574860 0.244 SERPINE2
serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2
chr6_-_56615544 0.244 NM_001723
NM_015548
DST

dystonin

chr6_+_64289585 0.243 PTP4A1
protein tyrosine phosphatase type IVA, member 1
chr11_-_35235325 0.237 SLC1A2
solute carrier family 1 (glial high affinity glutamate transporter), member 2
chr3_-_187744808 0.236 NM_017541
CRYGS
crystallin, gamma S
chr4_-_64957595 0.236 NM_001010874
TECRL
trans-2,3-enoyl-CoA reductase-like
chr5_+_175041069 0.236 NM_022304
HRH2
histamine receptor H2
chr1_-_152845399 0.236 NM_001193495
ADAR
adenosine deaminase, RNA-specific
chr2_+_234490781 0.236 NM_024080
TRPM8
transient receptor potential cation channel, subfamily M, member 8
chr12_+_79625538 0.235 NM_002469
MYF6
myogenic factor 6 (herculin)
chr1_-_150398327 0.234 NM_001122965
RPTN
repetin
chr12_+_100394787 0.233 NM_152323
SPIC
Spi-C transcription factor (Spi-1/PU.1 related)
chr1_-_21310462 0.233 NM_003760
EIF4G3
eukaryotic translation initiation factor 4 gamma, 3
chr13_+_31211678 0.233 NM_001166058
NM_130806
RXFP2

relaxin/insulin-like family peptide receptor 2

chr6_+_144654565 0.233 NM_007124
UTRN
utrophin
chrX_+_23982992 0.232 EIF2S3
eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa
chr5_-_58918031 0.232 NM_006203
PDE4D
phosphodiesterase 4D, cAMP-specific
chr11_+_33306652 0.232 HIPK3
homeodomain interacting protein kinase 3
chr13_+_52500830 0.232 NM_006418
OLFM4
olfactomedin 4
chr6_-_50045296 0.231 NM_001037729
DEFB113
defensin, beta 113
chr20_-_44521321 0.229 ZNF663
zinc finger protein 663
chr17_-_36533903 0.229 NM_031854
KRTAP4-12
keratin associated protein 4-12
chr2_-_206790871 0.228 NM_001098199
NM_005279
GPR1

G protein-coupled receptor 1

chr9_+_80134302 0.228 PSAT1
phosphoserine aminotransferase 1
chr8_-_110730183 0.228 NM_001099747
NM_001099748
NM_001099749
NM_001099750
NM_017786
SYBU




syntabulin (syntaxin-interacting)




chr15_+_46271158 0.223 NM_001145668
CTXN2
SLC12A1
cortexin 2
solute carrier family 12 (sodium/potassium/chloride transporters), member 1
chr9_+_110664366 0.222 NM_006687
ACTL7A
actin-like 7A
chr14_-_105997732 0.222 IGHA1
IGHG1
immunoglobulin heavy constant alpha 1
immunoglobulin heavy constant gamma 1 (G1m marker)
chr4_+_38740246 0.222 NM_015990
NM_199039
KLHL5

kelch-like 5 (Drosophila)

chr1_+_198263352 0.221 NM_003822
NM_205860
NR5A2

nuclear receptor subfamily 5, group A, member 2

chr4_-_189263395 0.220 NM_173553
TRIML2
tripartite motif family-like 2
chr7_+_129057152 0.220 NM_001040110
NRF1
nuclear respiratory factor 1
chr22_-_15682555 0.219 NM_175878
XKR3
XK, Kell blood group complex subunit-related family, member 3
chr3_-_143201878 0.217 NM_001178140
TFDP2
transcription factor Dp-2 (E2F dimerization partner 2)
chr4_+_15080586 0.216 NM_001080522
NM_001164720
NM_020785
CC2D2A


coiled-coil and C2 domain containing 2A


chr6_-_122807439 0.216 SERINC1
serine incorporator 1
chr6_-_50097606 0.215 NM_001037497
NM_001037728
DEFB110

defensin, beta 110 locus

chr9_+_6231677 0.211 NM_033439
IL33
interleukin 33
chr6_-_132952517 0.211 NM_003967
TAAR5
trace amine associated receptor 5
chr10_+_17310263 0.210 NM_003380
VIM
vimentin
chr6_-_133076873 0.206 NM_004666
VNN1
vanin 1
chr3_-_71860958 0.206 NM_001134650
EIF4E3
eukaryotic translation initiation factor 4E family member 3
chr8_-_62764839 0.205 NM_001164750
NM_001164751
NM_001164752
NM_001164753
NM_020164
NM_032467
NM_032468
ASPH






aspartate beta-hydroxylase






chr1_+_209622781 0.205 C1orf97
chromosome 1 open reading frame 97
chr11_+_59612712 0.204 NM_000139
MS4A2
membrane-spanning 4-domains, subfamily A, member 2 (Fc fragment of IgE, high affinity I, receptor for; beta polypeptide)
chr12_+_91341865 0.203 NM_001025233
CLLU1
chronic lymphocytic leukemia up-regulated 1
chr4_+_113437947 0.202 NM_001102406
NM_025144
ALPK1

alpha-kinase 1

chr11_+_55351270 0.202 NM_001004739
OR5L2
olfactory receptor, family 5, subfamily L, member 2
chrX_+_135558001 0.201 NM_000074
CD40LG
CD40 ligand
chr16_+_10430225 0.200 NM_024997
ATF7IP2
activating transcription factor 7 interacting protein 2

Gene Ontology Analysis

Gene overrepresentation in process category:

enrichment   p-value GO term description
2.36 2.75e-05 GO:0007608 sensory perception of smell
2.24 6.19e-05 GO:0007606 sensory perception of chemical stimulus
1.26 1.56e-03 GO:0032501 multicellular organismal process
1.78 2.38e-03 GO:0007600 sensory perception
1.49 5.84e-03 GO:0003008 system process
1.51 4.10e-02 GO:0050877 neurological system process

Gene overrepresentation in compartment category:

enrichment   p-value GO term description
1.34 5.52e-06 GO:0071944 cell periphery
1.34 7.32e-06 GO:0005886 plasma membrane
1.38 9.93e-03 GO:0005576 extracellular region

Gene overrepresentation in function category:

enrichment   p-value GO term description
2.07 2.72e-08 GO:0004930 G-protein coupled receptor activity
2.48 1.37e-06 GO:0004984 olfactory receptor activity
1.60 8.30e-06 GO:0004872 receptor activity
1.66 5.77e-05 GO:0004888 transmembrane receptor activity
1.48 1.34e-04 GO:0004871 signal transducer activity
1.48 1.34e-04 GO:0060089 molecular transducer activity