Motif ID: NKX3-2.p2

Z-value: 1.587


Transcription factors associated with NKX3-2.p2:

Gene SymbolEntrez IDGene Name
NKX3-2 579 NK3 homeobox 2

Activity-expression correlation:

GenePromoterPearsonP-valuePlot
NKX3-2chr4_-_13155135-0.233.8e-01Click!


Activity profile for motif NKX3-2.p2.

activity profile for motif NKX3-2.p2


Sorted Z-values histogram for motif NKX3-2.p2

Sorted Z-values for motif NKX3-2.p2



Network of associatons between targets according to the STRING database.



First level regulatory network of NKX3-2.p2

PNG image of the network

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Top targets:


Promoter Score Refseq Gene Symbol Gene Name
chr2_-_238861830 1.633 NM_022817
PER2
period homolog 2 (Drosophila)
chr8_+_32905027 1.546


chr2_+_17585462 1.463 VSNL1
visinin-like 1
chr2_+_228386800 1.401 NM_001130046
NM_004591
CCL20

chemokine (C-C motif) ligand 20

chr16_-_71650034 1.376 NM_001164766
ZFHX3
zinc finger homeobox 3
chr5_+_68746694 1.162 NM_001038603
MARVELD2
MARVEL domain containing 2
chr3_+_48482213 1.151 NM_016381
NM_033629
TREX1

three prime repair exonuclease 1

chr2_+_171280944 1.125 SP5
Sp5 transcription factor
chr16_+_55963883 1.111 CX3CL1
chemokine (C-X3-C motif) ligand 1
chr14_+_61653827 1.102 FLJ43390
hypothetical LOC646113
chr16_+_55963899 1.026 NM_002996
CX3CL1
chemokine (C-X3-C motif) ligand 1
chr14_-_20642214 1.010


chr2_+_17585287 0.982 NM_003385
VSNL1
visinin-like 1
chr2_-_136005238 0.972 NM_032143
ZRANB3
zinc finger, RAN-binding domain containing 3
chr3_+_48482625 0.963 TREX1
three prime repair exonuclease 1
chr3_+_106568430 0.960 ALCAM
activated leukocyte cell adhesion molecule
chr3_+_106568334 0.938 NM_001627
ALCAM
activated leukocyte cell adhesion molecule
chr14_-_22840249 0.896


chr14_+_30098079 0.894 NM_017769
G2E3
G2/M-phase specific E3 ubiquitin protein ligase
chr3_+_106568243 0.886 ALCAM
activated leukocyte cell adhesion molecule
chr8_+_123863075 0.866 NM_014943
ZHX2
zinc fingers and homeoboxes 2
chr10_-_105604942 0.865 NM_014631
SH3PXD2A
SH3 and PX domains 2A
chr14_-_23781328 0.859 TINF2
TERF1 (TRF1)-interacting nuclear factor 2
chr16_-_66523255 0.857 NM_001907
CTRL
chymotrypsin-like
chr17_+_55854636 0.853 NM_181707
C17orf64
chromosome 17 open reading frame 64
chr8_-_145132582 0.844 NM_032789
PARP10
poly (ADP-ribose) polymerase family, member 10
chr12_+_79995927 0.837 NM_024560
ACSS3
acyl-CoA synthetase short-chain family member 3
chr2_+_148495043 0.808 NM_018328
MBD5
methyl-CpG binding domain protein 5
chr13_+_112825113 0.804 NM_000504
F10
coagulation factor X
chr20_-_21442663 0.803 NM_002509
NKX2-2
NK2 homeobox 2
chr2_+_136005423 0.799 NM_015361
R3HDM1
R3H domain containing 1
chr8_+_123863169 0.790 ZHX2
zinc fingers and homeoboxes 2
chr2_-_70634129 0.785 NM_001099691
NM_003236
TGFA

transforming growth factor, alpha

chr5_+_35653702 0.744 NM_024867
NM_144722
SPEF2

sperm flagellar 2

chr10_+_123862430 0.740 TACC2
transforming, acidic coiled-coil containing protein 2
chr6_+_32114060 0.738 NM_000500
NM_001128590
CYP21A2

cytochrome P450, family 21, subfamily A, polypeptide 2

chr2_+_85665041 0.735 NM_006634
VAMP5
vesicle-associated membrane protein 5 (myobrevin)
chr12_+_56406296 0.730 LOC100130776
hypothetical LOC100130776
chr14_-_34414277 0.727 BAZ1A
bromodomain adjacent to zinc finger domain, 1A
chr13_+_75232797 0.725 NM_015842
LMO7
LIM domain 7
chr1_-_94779727 0.721 NM_001178096
NM_001993
F3

coagulation factor III (thromboplastin, tissue factor)

chr6_-_52060327 0.719 NM_138694
NM_170724
PKHD1

polycystic kidney and hepatic disease 1 (autosomal recessive)

chr16_+_49139694 0.715 NM_033119
NKD1
naked cuticle homolog 1 (Drosophila)
chr12_-_47604930 0.708 NM_001143781
FKBP11
FK506 binding protein 11, 19 kDa
chr2_+_201462294 0.700 NM_001136039
NM_001142355
NM_021824
NIF3L1


NIF3 NGG1 interacting factor 3-like 1 (S. pombe)


chr7_+_29200636 0.684 NM_004067
CHN2
chimerin (chimaerin) 2
chr14_-_23874083 0.679 NM_001198568
NM_001198592
NM_139247
ADCY4


adenylate cyclase 4


chr20_-_22513050 0.670 NM_021784
FOXA2
forkhead box A2
chr20_-_49852353 0.670 NM_020436
SALL4
sal-like 4 (Drosophila)
chr2_+_101981888 0.668 NM_173343
IL1R2
interleukin 1 receptor, type II
chr17_+_43165608 0.666 NM_013351
TBX21
T-box 21
chr16_-_87244896 0.664 NM_000101
CYBA
cytochrome b-245, alpha polypeptide
chr2_-_74588293 0.657 NM_032673
PCGF1
polycomb group ring finger 1
chr16_+_65790514 0.654 NM_024712
ELMO3
engulfment and cell motility 3
chr6_+_131190237 0.648 NM_001195597
LOC285733
hypothetical LOC285733
chr5_-_121440704 0.647 NM_001178102
LOX
lysyl oxidase
chr4_+_114190233 0.646 NM_001148
NM_020977
ANK2

ankyrin 2, neuronal

chr20_-_33793507 0.635 RBM39
RNA binding motif protein 39
chr9_+_77695334 0.633 NM_001190482
NM_006200
PCSK5

proprotein convertase subtilisin/kexin type 5

chr12_+_94861201 0.630 NM_152435
AMDHD1
amidohydrolase domain containing 1
chr6_-_16869579 0.629 NM_000332
NM_001128164
ATXN1

ataxin 1

chr14_-_34414241 0.627 BAZ1A
bromodomain adjacent to zinc finger domain, 1A
chr14_-_34414201 0.626 BAZ1A
bromodomain adjacent to zinc finger domain, 1A
chr16_-_87535106 0.624 NM_175931
CBFA2T3
core-binding factor, runt domain, alpha subunit 2; translocated to, 3
chr6_-_138935359 0.623 NM_020464
NHSL1
NHS-like 1
chr2_-_75641535 0.620 FAM176A
family with sequence similarity 176, member A
chr3_-_55490442 0.619 WNT5A
wingless-type MMTV integration site family, member 5A
chr6_+_26153590 0.613 NM_003531
HIST1H3C
histone cluster 1, H3c
chr20_-_22512893 0.609 FOXA2
forkhead box A2
chr19_+_40322231 0.607 NM_005031
FXYD1
FXYD domain containing ion transport regulator 1
chr12_+_14409875 0.597 NM_018179
ATF7IP
activating transcription factor 7 interacting protein
chr6_-_128883125 0.596 NM_002844
NM_001135648
PTPRK

protein tyrosine phosphatase, receptor type, K

chr20_-_33793591 0.589 RBM39
RNA binding motif protein 39
chr3_-_191522886 0.588 NM_021101
CLDN1
claudin 1
chr2_-_197499584 0.583 NM_024989
PGAP1
post-GPI attachment to proteins 1
chr2_-_37727472 0.578 CDC42EP3
CDC42 effector protein (Rho GTPase binding) 3
chr15_+_97462675 0.572 NM_015286
NM_145728
SYNM

synemin, intermediate filament protein

chr19_-_4468715 0.571 NM_001080400
PLIN4
perilipin 4
chr10_-_123343761 0.561 NM_001144916
FGFR2
fibroblast growth factor receptor 2
chr14_+_20527971 0.560 METTL17
methyltransferase like 17
chr1_-_94475840 0.558 NM_004815
ARHGAP29
Rho GTPase activating protein 29
chr2_+_201099093 0.558 NM_001160033
NM_001160046
NM_152524
SGOL2


shugoshin-like 2 (S. pombe)


chr7_-_11838260 0.556 NM_015204
THSD7A
thrombospondin, type I, domain containing 7A
chr20_-_42249631 0.550 NM_020433
NM_175913
JPH2

junctophilin 2

chr2_-_168812132 0.542 NM_013233
STK39
serine threonine kinase 39
chr14_-_20642629 0.541 NM_001102454
ZNF219
zinc finger protein 219
chr14_-_22127902 0.541 DAD1
defender against cell death 1
chr17_-_70131389 0.541 NM_181449
CD300E
CD300e molecule
chr3_+_2115449 0.535 CNTN4
contactin 4
chr8_+_121206478 0.531 NM_021110
COL14A1
collagen, type XIV, alpha 1
chr22_+_39404940 0.531 NM_005297
MCHR1
melanin-concentrating hormone receptor 1
chr2_-_75641587 0.529 NM_001135032
FAM176A
family with sequence similarity 176, member A
chr1_-_94475504 0.525 ARHGAP29
Rho GTPase activating protein 29
chr3_+_113061330 0.524 PHLDB2
pleckstrin homology-like domain, family B, member 2
chr2_+_96295751 0.522 CIAO1
cytosolic iron-sulfur protein assembly 1
chr14_-_53491019 0.521 NM_130851
BMP4
bone morphogenetic protein 4
chr2_+_225973845 0.519 NM_020864
KIAA1486
KIAA1486
chr6_-_41823056 0.517 NM_001166424
NM_002630
PGC

progastricsin (pepsinogen C)

chr9_+_111582317 0.514 NM_053016
NM_007203
NM_147150
PALM2
PALM2-AKAP2

paralemmin 2
PALM2-AKAP2 readthrough

chr8_+_120497732 0.513 NM_002514
NOV
nephroblastoma overexpressed gene
chr6_-_149847809 0.511 NM_207360
ZC3H12D
zinc finger CCCH-type containing 12D
chr10_-_16604009 0.511 NM_001010908
C1QL3
complement component 1, q subcomponent-like 3
chr8_+_85258007 0.510 NM_001100392
NM_001100393
RALYL

RALY RNA binding protein-like

chr14_-_34413831 0.506 BAZ1A
bromodomain adjacent to zinc finger domain, 1A
chr8_+_11599119 0.506 NM_002052
GATA4
GATA binding protein 4
chr12_-_15265490 0.505 NM_001190726
NM_032918
RERG

RAS-like, estrogen-regulated, growth inhibitor

chr12_-_6355165 0.504 NM_001038
SCNN1A
sodium channel, nonvoltage-gated 1 alpha
chr3_-_55490401 0.503 WNT5A
wingless-type MMTV integration site family, member 5A
chr17_+_71154240 0.502 NM_001162997
LOC100130933
hypothetical protein LOC100130933
chr6_+_96570565 0.499 NM_006581
FUT9
fucosyltransferase 9 (alpha (1,3) fucosyltransferase)
chr12_+_51979721 0.499 NM_021640
C12orf10
chromosome 12 open reading frame 10
chr4_+_89597257 0.499 NM_016323
HERC5
hect domain and RLD 5
chr8_-_122722674 0.497 NM_005328
HAS2
hyaluronan synthase 2
chr3_-_81893604 0.494 NM_000158
GBE1
glucan (1,4-alpha-), branching enzyme 1
chr2_+_238200922 0.492 NM_001137550
LRRFIP1
leucine rich repeat (in FLII) interacting protein 1
chrX_+_38305634 0.491 NM_004615
TSPAN7
tetraspanin 7
chr13_-_110066694 0.489


chr20_+_2309553 0.489 NM_198994
TGM6
transglutaminase 6
chr2_-_96295443 0.488 TMEM127
transmembrane protein 127
chr14_-_34943574 0.488 NM_020529
NFKBIA
nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha
chr5_-_134899537 0.486 NM_006161
NEUROG1
neurogenin 1
chr7_-_100751643 0.485 NM_001130820
NM_001130821
NM_001130822
NM_022777
RABL5



RAB, member RAS oncogene family-like 5



chr10_-_71575953 0.485 TYSND1
trypsin domain containing 1
chr10_+_59942874 0.485 NM_001080512
BICC1
bicaudal C homolog 1 (Drosophila)
chr20_-_1922701 0.485 NM_001190899
NM_001190898
NM_024411
PDYN


prodynorphin


chr3_-_121445831 0.481 NM_001168271
NM_153002
GPR156

G protein-coupled receptor 156

chr2_-_101134146 0.481 NM_001102426
TBC1D8
TBC1 domain family, member 8 (with GRAM domain)
chr10_+_96295511 0.478 NM_018063
HELLS
helicase, lymphoid-specific
chr16_-_67930974 0.475 NM_032382
COG8
component of oligomeric golgi complex 8
chr17_-_40348378 0.474 NM_001131019
NM_002055
GFAP

glial fibrillary acidic protein

chr14_-_21014871 0.474 NM_032846
RAB2B
RAB2B, member RAS oncogene family
chr4_-_164754106 0.472 NM_017923
MARCH1
membrane-associated ring finger (C3HC4) 1
chr17_+_18796202 0.471 NM_001042450
NM_152351
SLC5A10

solute carrier family 5 (sodium/glucose cotransporter), member 10

chr3_+_113061218 0.469 NM_001134439
PHLDB2
pleckstrin homology-like domain, family B, member 2
chr17_-_31332568 0.469 NM_004590
CCL16
chemokine (C-C motif) ligand 16
chr20_-_33793593 0.467 NM_004902
NM_184234
RBM39

RNA binding motif protein 39

chr20_+_43425153 0.464 NM_001099791
NM_033542
SYS1-DBNDD2
SYS1

SYS1-DBNDD2 read-through transcript
SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)

chr20_-_16501911 0.464 NM_024704
KIF16B
kinesin family member 16B
chr12_+_54361596 0.461 NM_152637
METTL7B
methyltransferase like 7B
chr5_-_35083996 0.459 NM_031900
AGXT2
alanine--glyoxylate aminotransferase 2
chr16_-_80602546 0.458 NM_145168
SDR42E1
short chain dehydrogenase/reductase family 42E, member 1
chr3_+_112876212 0.457 NM_001185106
NM_153268
PLCXD2

phosphatidylinositol-specific phospholipase C, X domain containing 2

chr16_-_28528780 0.456 NM_001055
NM_177529
SULT1A1

sulfotransferase family, cytosolic, 1A, phenol-preferring, member 1

chr12_-_47605478 0.455 NM_001143782
NM_016594
FKBP11

FK506 binding protein 11, 19 kDa

chr19_-_53365371 0.453 NM_000234
LIG1
ligase I, DNA, ATP-dependent
chr2_-_201461945 0.453 NM_032472
NM_130906
PPIL3

peptidylprolyl isomerase (cyclophilin)-like 3

chr2_+_218833982 0.452 NM_001077191
NM_001077194
NM_170699
GPBAR1


G protein-coupled bile acid receptor 1


chr7_+_90177082 0.452 CDK14
cyclin-dependent kinase 14
chr12_+_54361685 0.451 METTL7B
methyltransferase like 7B
chr14_-_23686269 0.450 PSME2
proteasome (prosome, macropain) activator subunit 2 (PA28 beta)
chr16_-_45735403 0.449 NM_018092
NETO2
neuropilin (NRP) and tolloid (TLL)-like 2
chr14_+_23633101 0.449 NM_001018073
NM_004563
PCK2

phosphoenolpyruvate carboxykinase 2 (mitochondrial)

chr11_+_12355600 0.448 NM_018222
PARVA
parvin, alpha
chr11_-_122357545 0.447 NM_001098169
BSX
brain-specific homeobox
chr3_+_113061296 0.447 PHLDB2
pleckstrin homology-like domain, family B, member 2
chr22_-_22714230 0.447 NM_000853
GSTT1
glutathione S-transferase theta 1
chr14_+_23700261 0.446 NM_006084
IRF9
interferon regulatory factor 9
chr16_-_45735333 0.446 NETO2
neuropilin (NRP) and tolloid (TLL)-like 2
chr2_+_48395271 0.446 NM_002158
FOXN2
forkhead box N2
chr6_-_27387989 0.445 NM_033482
POM121L2
POM121 membrane glycoprotein-like 2
chr3_-_81893308 0.440 GBE1
glucan (1,4-alpha-), branching enzyme 1
chr2_-_148495642 0.440 NM_181742
ORC4
origin recognition complex, subunit 4
chr3_-_185578621 0.439 NM_000460
NM_001177597
NM_001177598
THPO


thrombopoietin


chr18_-_46068048 0.439 CXXC1
CXXC finger protein 1
chr13_+_25726755 0.437 NM_001260
CDK8
cyclin-dependent kinase 8
chr8_+_123863224 0.436 ZHX2
zinc fingers and homeoboxes 2
chr7_-_50596238 0.436 NM_000790
DDC
dopa decarboxylase (aromatic L-amino acid decarboxylase)
chr9_-_124715392 0.435 NM_006626
ZBTB6
zinc finger and BTB domain containing 6
chr14_+_21015198 0.435 TOX4
TOX high mobility group box family member 4
chr2_-_24123726 0.432 NM_001142319
NM_025203
C2orf44

chromosome 2 open reading frame 44

chr14_+_71469538 0.430 NM_004296
RGS6
regulator of G-protein signaling 6
chr12_+_81604752 0.430 TMTC2
transmembrane and tetratricopeptide repeat containing 2
chr2_-_189752575 0.427 NM_000393
COL5A2
collagen, type V, alpha 2
chr3_-_114947330 0.426 NAA50
N(alpha)-acetyltransferase 50, NatE catalytic subunit
chr14_-_21014666 0.420 NM_001163380
RAB2B
RAB2B, member RAS oncogene family
chr6_-_5952096 0.419 NRN1
neuritin 1
chr9_-_26882713 0.418 NM_001167575
NM_024828
C9orf82

chromosome 9 open reading frame 82

chr1_+_107484151 0.417 NM_001113226
NM_001113228
NM_014917
NTNG1


netrin G1


chr4_-_84475328 0.416 NM_001166498
NM_006665
HPSE

heparanase

chr2_-_191723978 0.414 STAT4
signal transducer and activator of transcription 4
chr2_-_68952006 0.413 NM_014482
BMP10
bone morphogenetic protein 10
chr2_-_220144427 0.413 OBSL1
obscurin-like 1
chr14_+_21015168 0.412 NM_014828
TOX4
TOX high mobility group box family member 4
chr6_-_149847718 0.412 ZC3H12D
zinc finger CCCH-type containing 12D
chr10_+_91451313 0.410 NM_016195
KIF20B
kinesin family member 20B
chr3_-_184363126 0.409 LAMP3
lysosomal-associated membrane protein 3
chr4_-_24641404 0.408 NM_018176
LGI2
leucine-rich repeat LGI family, member 2
chr20_+_5839973 0.408 NM_001819
CHGB
chromogranin B (secretogranin 1)
chr2_+_190753833 0.408 NM_001042519
NM_032321
C2orf88

chromosome 2 open reading frame 88

chr2_+_241903395 0.407 NM_001008491
NM_006155
SEPT2

septin 2

chr18_-_46068003 0.406 CXXC1
CXXC finger protein 1
chr7_+_96473225 0.405 NM_005222
DLX6
distal-less homeobox 6
chr2_-_74460933 0.405 NM_001135040
NM_001190837
NM_004082
DCTN1


dynactin 1


chr8_-_99375739 0.405 NM_024759
NIPAL2
NIPA-like domain containing 2
chr7_+_80145461 0.405 CD36
CD36 molecule (thrombospondin receptor)
chr3_-_81893492 0.404 GBE1
glucan (1,4-alpha-), branching enzyme 1
chr14_+_105024576 0.402 CRIP1
cysteine-rich protein 1 (intestinal)
chr2_+_219141761 0.402 NM_005444
RQCD1
RCD1 required for cell differentiation1 homolog (S. pombe)
chr2_-_74588006 0.401 PCGF1
polycomb group ring finger 1
chr9_-_21984329 0.400 CDKN2A
cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)

Gene Ontology Analysis

Gene overrepresentation in process category:

enrichment   p-value GO term description
1.31 1.02e-03 GO:0007399 nervous system development
1.10 4.51e-03 GO:0065007 biological regulation
1.44 4.72e-03 GO:0045595 regulation of cell differentiation
1.45 7.84e-03 GO:0032989 cellular component morphogenesis
1.37 9.32e-03 GO:0022008 neurogenesis
1.23 9.36e-03 GO:0048869 cellular developmental process
1.36 1.01e-02 GO:0050793 regulation of developmental process
1.20 1.03e-02 GO:0048518 positive regulation of biological process
1.06 1.31e-02 GO:0009987 cellular process
1.63 1.38e-02 GO:0060284 regulation of cell development
1.10 1.44e-02 GO:0050789 regulation of biological process
1.36 1.92e-02 GO:0048699 generation of neurons
1.27 2.29e-02 GO:0009653 anatomical structure morphogenesis
1.22 2.48e-02 GO:0030154 cell differentiation
1.38 2.88e-02 GO:2000026 regulation of multicellular organismal development
1.20 3.15e-02 GO:0048519 negative regulation of biological process
1.43 3.23e-02 GO:0000902 cell morphogenesis

Gene overrepresentation in compartment category:

enrichment   p-value GO term description
1.05 2.23e-02 GO:0044424 intracellular part
1.05 2.46e-02 GO:0005622 intracellular

Gene overrepresentation in function category:

enrichment   p-value GO term description
1.13 2.17e-06 GO:0005515 protein binding
1.45 5.78e-03 GO:0008092 cytoskeletal protein binding
1.05 1.09e-02 GO:0005488 binding