Motif ID: RFX1..5_RFXANK_RFXAP.p2

Z-value: 2.428


Transcription factors associated with RFX1..5_RFXANK_RFXAP.p2:

Gene SymbolEntrez IDGene Name
RFX1 5989 regulatory factor X, 1 (influences HLA class II expression)
RFX2 5990 regulatory factor X, 2 (influences HLA class II expression)
RFX3 5991 regulatory factor X, 3 (influences HLA class II expression)
RFX4 5992 regulatory factor X, 4 (influences HLA class II expression)
RFX5 5993 regulatory factor X, 5 (influences HLA class II expression)
RFXANK 8625 regulatory factor X-associated ankyrin-containing protein
RFXAP 5994 regulatory factor X-associated protein

Activity-expression correlation:

GenePromoterPearsonP-valuePlot
RFX1chr19_-_13977875-0.467.1e-02Click!
RFX5chr1_-_149586298-0.371.6e-01Click!
RFX4chr12_+_1055011610.292.7e-01Click!
RFX3chr9_-_35157210.282.9e-01Click!
RFX2chr19_-_60614910.224.1e-01Click!
RFXANKchr19_+_19164732-0.224.2e-01Click!
RFXAPchr13_+_362913060.146.0e-01Click!


Activity profile for motif RFX1..5_RFXANK_RFXAP.p2.

activity profile for motif RFX1..5_RFXANK_RFXAP.p2


Sorted Z-values histogram for motif RFX1..5_RFXANK_RFXAP.p2

Sorted Z-values for motif RFX1..5_RFXANK_RFXAP.p2



Network of associatons between targets according to the STRING database.



First level regulatory network of RFX1..5_RFXANK_RFXAP.p2

PNG image of the network

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Top targets:


Promoter Score Refseq Gene Symbol Gene Name
chr1_-_118529303 4.687 NM_206996
SPAG17
sperm associated antigen 17
chr15_-_41589958 2.702 NM_005657
TP53BP1
tumor protein p53 binding protein 1
chrX_+_135079461 2.598 NM_001167819
FHL1
four and a half LIM domains 1
chr17_-_34603577 2.364 CACNB1
calcium channel, voltage-dependent, beta 1 subunit
chr19_+_53641053 2.183 GRWD1
glutamate-rich WD repeat containing 1
chr1_-_158136521 2.144 NM_012337
CCDC19
coiled-coil domain containing 19
chr19_+_53641029 2.060 GRWD1
glutamate-rich WD repeat containing 1
chr18_+_30544193 1.830 NM_001198941
NM_032978
DTNA

dystrobrevin, alpha

chr7_-_139987044 1.826 DENND2A
DENN/MADD domain containing 2A
chr14_-_88087575 1.826 PTPN21
protein tyrosine phosphatase, non-receptor type 21
chr17_+_19255083 1.659 NM_007148
RNF112
ring finger protein 112
chr1_+_42701460 1.538 CCDC30
coiled-coil domain containing 30
chr11_-_132318741 1.484 OPCML
opioid binding protein/cell adhesion molecule-like
chr20_-_3710060 1.470 NM_015417
SPEF1
sperm flagellar 1
chr7_-_44195405 1.436 NM_000162
GCK
glucokinase (hexokinase 4)
chr3_-_27385856 1.434 NM_199347
NEK10
NIMA (never in mitosis gene a)- related kinase 10
chr4_+_87734489 1.427 NM_006264
NM_080683
NM_080684
NM_080685
PTPN13



protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)



chr6_+_34590624 1.414 PACSIN1
protein kinase C and casein kinase substrate in neurons 1
chr16_-_56393881 1.412 NM_001130100
NM_005550
KIFC3

kinesin family member C3

chr16_-_56393871 1.395 KIFC3
kinesin family member C3
chr9_+_111442888 1.381 NM_001037293
PALM2
paralemmin 2
chr13_-_59223074 1.331


chr21_-_42789369 1.299 NM_080860
RSPH1
radial spoke head 1 homolog (Chlamydomonas)
chr5_-_14064846 1.295 DNAH5
dynein, axonemal, heavy chain 5
chr3_-_130630021 1.279 NM_207307
C3orf25
chromosome 3 open reading frame 25
chr15_+_96304911 1.235 NM_183376
ARRDC4
arrestin domain containing 4
chr16_+_56219802 1.225 NM_001145771
NM_001145772
NM_001145773
NM_201524
NM_201525
GPR56




G protein-coupled receptor 56




chr6_+_43720744 1.223 NM_001193341
NM_152732
RSPH9

radial spoke head 9 homolog (Chlamydomonas)

chr16_+_55836480 1.209 NM_012106
ARL2BP
ADP-ribosylation factor-like 2 binding protein
chr11_-_114880275 1.189 NM_001098517
NM_014333
CADM1

cell adhesion molecule 1

chr15_-_70385709 1.182 NM_001172685
CELF6
CUGBP, Elav-like family member 6
chr3_-_122951200 1.170 NM_004487
GOLGB1
golgin B1
chr19_+_59062962 1.152 MYADM
myeloid-associated differentiation marker
chr11_+_133444029 1.148 NM_032801
JAM3
junctional adhesion molecule 3
chr2_+_120018494 1.143 NM_001029996
PCDP1
primary ciliary dyskinesia protein 1
chr17_+_51585834 1.130 NM_153228
ANKFN1
ankyrin-repeat and fibronectin type III domain containing 1
chr15_-_68971665 1.128 NM_020147
THAP10
THAP domain containing 10
chr7_-_13997389 1.119 NM_001163149
ETV1
ets variant 1
chr19_+_59062937 1.108 NM_001020819
NM_138373
MYADM

myeloid-associated differentiation marker

chr15_+_96304942 1.105 ARRDC4
arrestin domain containing 4
chr1_+_201711578 1.104 PRELP
proline/arginine-rich end leucine-rich repeat protein
chr11_-_65860450 1.099 NM_004292
RIN1
Ras and Rab interactor 1
chr17_-_8020332 1.089 NM_032354
NM_183065
TMEM107

transmembrane protein 107

chr1_-_6502655 1.067 NM_198681
PLEKHG5
pleckstrin homology domain containing, family G (with RhoGef domain) member 5
chr5_-_149649593 1.050 NM_015981
NM_171825
CAMK2A

calcium/calmodulin-dependent protein kinase II alpha

chr2_+_74502364 1.042 NM_032118
WDR54
WD repeat domain 54
chr19_+_59062982 1.041 MYADM
myeloid-associated differentiation marker
chr3_-_16281287 1.029 NM_001047434
NM_206831
DPH3

DPH3, KTI11 homolog (S. cerevisiae)

chr12_-_129889569 1.028 NM_001980
NM_194356
STX2

syntaxin 2

chr1_-_33669190 1.026 PHC2
polyhomeotic homolog 2 (Drosophila)
chr17_-_34235078 1.025 NM_017748
CWC25
CWC25 spliceosome-associated protein homolog (S. cerevisiae)
chr17_-_15185623 1.020 NM_031898
TEKT3
tektin 3
chr7_+_48041632 1.017 NM_001100159
C7orf57
chromosome 7 open reading frame 57
chr19_+_59077241 1.012 NM_002739
PRKCG
protein kinase C, gamma
chr19_-_51666503 1.009 PNMAL1
PNMA-like 1
chr1_+_201711505 1.000 NM_002725
NM_201348
PRELP

proline/arginine-rich end leucine-rich repeat protein

chr2_+_213857347 0.988 NM_001025436
NM_024532
SPAG16

sperm associated antigen 16

chr2_-_47257150 0.985 CALM2
calmodulin 2 (phosphorylase kinase, delta)
chr16_-_65984836 0.985 NM_015964
NM_016140
TPPP3

tubulin polymerization-promoting protein family member 3

chr2_-_47257117 0.974 CALM2
calmodulin 2 (phosphorylase kinase, delta)
chr2_-_47257183 0.974 NM_001743
CALM2
calmodulin 2 (phosphorylase kinase, delta)
chr2_+_43854681 0.971 NM_001193464
NM_015522
NM_016008
DYNC2LI1


dynein, cytoplasmic 2, light intermediate chain 1


chr19_-_60369731 0.968 NM_178837
C19orf51
chromosome 19 open reading frame 51
chr2_-_47257156 0.967 CALM2
calmodulin 2 (phosphorylase kinase, delta)
chr11_+_133444175 0.963 JAM3
junctional adhesion molecule 3
chr17_+_69711436 0.960 RPL38
ribosomal protein L38
chrX_+_135079120 0.960 NM_001159704
FHL1
four and a half LIM domains 1
chr14_-_72523404 0.956 NM_178441
ZFYVE1
zinc finger, FYVE domain containing 1
chr1_+_201862845 0.955 ATP2B4
ATPase, Ca++ transporting, plasma membrane 4
chr17_+_69711389 0.943 NM_000999
NM_001035258
RPL38

ribosomal protein L38

chrX_-_99778340 0.941 NM_003270
TSPAN6
tetraspanin 6
chr7_-_100751643 0.933 NM_001130820
NM_001130821
NM_001130822
NM_022777
RABL5



RAB, member RAS oncogene family-like 5



chr7_+_133462591 0.929 NM_144648
LRGUK
leucine-rich repeats and guanylate kinase domain containing
chr14_+_99329198 0.927 NM_001008707
NM_004434
EML1

echinoderm microtubule associated protein like 1

chr15_+_68971835 0.927 NM_001199017
NM_017691
NM_001199018
LRRC49


leucine rich repeat containing 49


chr2_-_47257083 0.922 CALM2
calmodulin 2 (phosphorylase kinase, delta)
chr11_+_66117231 0.919 CCS
copper chaperone for superoxide dismutase
chr15_+_73803351 0.910 NM_175881
ODF3L1
outer dense fiber of sperm tails 3-like 1
chr20_+_43425501 0.908 SYS1
SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)
chr11_+_7997366 0.903 TUB
tubby homolog (mouse)
chr17_-_38530935 0.901 NM_007297
NM_007299
NM_007294
NM_007300
BRCA1



breast cancer 1, early onset



chr1_+_45046740 0.901 NM_001136537
BTBD19
BTB (POZ) domain containing 19
chr1_-_86634511 0.888 NM_001007022
NM_001184765
NM_001184766
NM_020729
ODF2L



outer dense fiber of sperm tails 2-like



chr19_+_40322231 0.887 NM_005031
FXYD1
FXYD domain containing ion transport regulator 1
chr9_+_135314907 0.884 NM_001135775
NM_017586
C9orf7

chromosome 9 open reading frame 7

chr8_-_101187346 0.884 RGS22
regulator of G-protein signaling 22
chr16_+_28893525 0.884 NM_001142448
NM_001142449
NM_001142450
NM_001142451
NM_032038
SPIN1
SPNS1




spindlin 1
spinster homolog 1 (Drosophila)




chr11_+_46914804 0.882 NM_001003676
NM_001003677
NM_001003678
NM_024113
C11orf49



chromosome 11 open reading frame 49



chr19_-_51666629 0.873 NM_001103149
NM_018215
PNMAL1

PNMA-like 1

chr11_-_66117061 0.870 NM_018219
CCDC87
coiled-coil domain containing 87
chr5_-_149649380 0.867 CAMK2A
calcium/calmodulin-dependent protein kinase II alpha
chr1_-_36688556 0.860 NM_145047
NM_206837
OSCP1

organic solute carrier partner 1

chr10_+_25345513 0.852 NM_024838
THNSL1
threonine synthase-like 1 (S. cerevisiae)
chr20_+_61374603 0.843 NM_018209
NM_175609
ARFGAP1

ADP-ribosylation factor GTPase activating protein 1

chr22_-_43272567 0.839 NM_032287
LDOC1L
leucine zipper, down-regulated in cancer 1-like
chr6_+_109276280 0.837 NM_032131
ARMC2
armadillo repeat containing 2
chr13_-_29779556 0.834 NM_032116
KATNAL1
katanin p60 subunit A-like 1
chr15_+_79213660 0.831 NM_173528
C15orf26
chromosome 15 open reading frame 26
chr9_+_135994734 0.829 NM_052821
WDR5
WD repeat domain 5
chr12_+_68265469 0.827 NM_006431
CCT2
chaperonin containing TCP1, subunit 2 (beta)
chr12_-_123568781 0.824


chr4_+_114433551 0.820 ANK2
ankyrin 2, neuronal
chr11_+_131285747 0.817 NM_001144058
NM_001144059
NM_016522
NTM


neurotrimin


chr20_+_61374581 0.811 ARFGAP1
ADP-ribosylation factor GTPase activating protein 1
chr2_+_27046952 0.801 NM_012326
MAPRE3
microtubule-associated protein, RP/EB family, member 3
chr9_-_109291866 0.801 NM_004235
KLF4
Kruppel-like factor 4 (gut)
chr11_+_66117240 0.800 NM_005125
CCS
copper chaperone for superoxide dismutase
chr1_-_59022275 0.800 NM_002228
JUN
jun proto-oncogene
chr1_+_153413675 0.793 TRIM46
tripartite motif containing 46
chr20_+_43425153 0.790 NM_001099791
NM_033542
SYS1-DBNDD2
SYS1

SYS1-DBNDD2 read-through transcript
SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)

chr10_+_63092724 0.789 NM_173554
C10orf107
chromosome 10 open reading frame 107
chr17_+_38430773 0.789 NM_005440
RND2
Rho family GTPase 2
chr1_-_6480058 0.779 NM_001042663
PLEKHG5
pleckstrin homology domain containing, family G (with RhoGef domain) member 5
chr4_-_153920326 0.778 NM_145720
TIGD4
tigger transposable element derived 4
chr3_+_47819631 0.778 DHX30
DEAH (Asp-Glu-Ala-His) box polypeptide 30
chr1_-_166171838 0.778 NM_015415
BRP44
brain protein 44
chr9_-_109291575 0.770 KLF4
Kruppel-like factor 4 (gut)
chr2_-_187422141 0.765 NM_182521
ZSWIM2
zinc finger, SWIM-type containing 2
chr3_-_30911156 0.762 NM_207359
GADL1
glutamate decarboxylase-like 1
chr15_-_47700342 0.762 NM_152647
C15orf33
chromosome 15 open reading frame 33
chr13_+_97403929 0.761 NM_002271
IPO5
importin 5
chr8_-_98359366 0.761 TSPYL5
TSPY-like 5
chr1_+_153445113 0.760 NM_002455
NM_198883
MTX1

metaxin 1

chr19_+_53640841 0.760 NM_031485
GRWD1
glutamate-rich WD repeat containing 1
chr7_-_102707901 0.760 DPY19L2P2
dpy-19-like 2 pseudogene 2 (C. elegans)
chr8_-_101187519 0.759 NM_015668
RGS22
regulator of G-protein signaling 22
chr12_+_68265535 0.759 CCT2
chaperonin containing TCP1, subunit 2 (beta)
chr8_+_39084206 0.755 NM_145004
ADAM32
ADAM metallopeptidase domain 32
chr5_-_16795336 0.751 MYO10
myosin X
chr11_+_85243791 0.748 NM_173556
CCDC83
coiled-coil domain containing 83
chr7_+_101978777 0.747 NM_001166339
NM_001031618
SPDYE2L
SPDYE2
WBSCR19-like protein 3
speedy homolog E2 (Xenopus laevis)
chr11_-_56846246 0.740 TNKS1BP1
tankyrase 1 binding protein 1, 182kDa
chr8_-_133756943 0.740 NM_012472
LRRC6
leucine rich repeat containing 6
chr7_+_129919157 0.737 NM_002402
MEST
mesoderm specific transcript homolog (mouse)
chr16_-_674357 0.737 NM_001005920
JMJD8
jumonji domain containing 8
chr7_-_35192177 0.737 DPY19L2P1
dpy-19-like 2 pseudogene 1 (C. elegans)
chr8_-_98359347 0.736 NM_033512
TSPYL5
TSPY-like 5
chr9_+_99109730 0.735 NM_020893
C9orf174
chromosome 9 open reading frame 174
chr19_-_7459867 0.735 NM_080662
PEX11G
peroxisomal biogenesis factor 11 gamma
chr8_+_144870482 0.728 NM_139021
MAPK15
mitogen-activated protein kinase 15
chr7_+_76589869 0.725 NM_020879
CCDC146
coiled-coil domain containing 146
chr19_+_60543032 0.720 NM_032701
SUV420H2
suppressor of variegation 4-20 homolog 2 (Drosophila)
chr14_-_22127954 0.719 NM_001344
DAD1
defender against cell death 1
chr7_-_44129661 0.718 POLD2
polymerase (DNA directed), delta 2, regulatory subunit 50kDa
chr1_-_6480035 0.715 PLEKHG5
pleckstrin homology domain containing, family G (with RhoGef domain) member 5
chr17_+_260408 0.713 NM_001013672
C17orf97
chromosome 17 open reading frame 97
chr5_+_172000793 0.712 NM_001142651
NEURL1B
neuralized homolog 1B (Drosophila)
chr11_-_5916424 0.712 TRIM5
tripartite motif containing 5
chr3_-_199161152 0.711 NM_001134435
IQCG
IQ motif containing G
chr5_+_92944680 0.710 NM_005654
NR2F1
nuclear receptor subfamily 2, group F, member 1
chr20_+_43478120 0.710 NM_001184728
NM_001184729
NM_001184730
NM_015937
PIGT



phosphatidylinositol glycan anchor biosynthesis, class T



chr7_-_44129664 0.704 NM_001127218
NM_006230
POLD2

polymerase (DNA directed), delta 2, regulatory subunit 50kDa

chr11_+_6998275 0.704 NM_176822
NLRP14
NLR family, pyrin domain containing 14
chr14_-_22127902 0.704 DAD1
defender against cell death 1
chr6_-_152744143 0.703 SYNE1
spectrin repeat containing, nuclear envelope 1
chr13_-_95092283 0.700 DZIP1
DAZ interacting protein 1
chr22_-_29393786 0.699 NM_152511
DUSP18
dual specificity phosphatase 18
chr10_+_70418482 0.698 NM_015634
KIAA1279
KIAA1279
chr17_-_38530830 0.696 BRCA1
breast cancer 1, early onset
chr7_-_4889772 0.695 NM_018059
RADIL
Ras association and DIL domains
chr6_-_32271868 0.694 NOTCH4
notch 4
chr1_+_159395853 0.692 NM_001014443
NM_012475
USP21

ubiquitin specific peptidase 21

chr6_+_43005126 0.685 CNPY3
canopy 3 homolog (zebrafish)
chr14_-_47213906 0.685 NM_001113498
MDGA2
MAM domain containing glycosylphosphatidylinositol anchor 2
chr19_+_43518282 0.684 NM_021185
CATSPERG
cation channel, sperm-associated, gamma
chr8_+_120497732 0.682 NM_002514
NOV
nephroblastoma overexpressed gene
chr10_-_116382089 0.678 ABLIM1
actin binding LIM protein 1
chr11_-_67032675 0.662 NM_005851
CDK2AP2
cyclin-dependent kinase 2 associated protein 2
chr17_-_19560470 0.659 NM_001099646
NM_152908
SLC47A2

solute carrier family 47, member 2

chr14_-_59407103 0.657 NM_021136
RTN1
reticulon 1
chr3_+_98966253 0.652 NM_032146
NM_177976
ARL6

ADP-ribosylation factor-like 6

chr10_+_12211586 0.650 NM_001142627
NM_001142628
NM_018144
SEC61A2


Sec61 alpha 2 subunit (S. cerevisiae)


chr3_+_47819402 0.649 NM_014966
NM_138615
DHX30

DEAH (Asp-Glu-Ala-His) box polypeptide 30

chr7_-_13997574 0.649 NM_001163148
ETV1
ets variant 1
chr9_-_34116703 0.643 NM_015397
DCAF12
DDB1 and CUL4 associated factor 12
chr11_+_61204392 0.643 NM_006133
DAGLA
diacylglycerol lipase, alpha
chr3_+_48482213 0.642 NM_016381
NM_033629
TREX1

three prime repair exonuclease 1

chr22_+_39931231 0.641 NM_031488
L3MBTL2
l(3)mbt-like 2 (Drosophila)
chr22_-_29393591 0.641 DUSP18
dual specificity phosphatase 18
chr20_-_47965393 0.640 SPATA2
spermatogenesis associated 2
chr19_+_62950001 0.639 ZNF776
zinc finger protein 776
chr7_+_150356435 0.639 NM_007188
ABCB8
ATP-binding cassette, sub-family B (MDR/TAP), member 8
chr6_-_152744022 0.638 SYNE1
spectrin repeat containing, nuclear envelope 1
chr12_-_62348506 0.638 NM_173812
DPY19L2
dpy-19-like 2 (C. elegans)
chr14_+_23908141 0.637 NM_001198966
NFATC4
nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4
chr11_+_28086373 0.636 NM_001113528
NM_152636
METTL15

methyltransferase like 15

chr6_+_43004837 0.630 NM_006586
CNPY3
canopy 3 homolog (zebrafish)
chr19_+_1401117 0.623 NM_005883
APC2
adenomatosis polyposis coli 2
chr6_+_14032655 0.623 NM_001165034
RNF182
ring finger protein 182
chr19_+_63654766 0.620 NM_207395
ZNF324B
zinc finger protein 324B
chr21_-_45532176 0.618 NM_015227
NM_133635
POFUT2

protein O-fucosyltransferase 2

chr11_-_85074848 0.618 NM_152723
CCDC89
coiled-coil domain containing 89
chr11_-_10671873 0.616 MRVI1
murine retrovirus integration site 1 homolog
chr16_-_52295214 0.616 NM_001127897
NM_015272
RPGRIP1L

RPGRIP1-like

chr20_+_61374628 0.615 ARFGAP1
ADP-ribosylation factor GTPase activating protein 1
chr12_-_52939636 0.614 NM_001127321
CBX5
chromobox homolog 5
chr14_-_73250094 0.609 NM_006029
PNMA1
paraneoplastic antigen MA1
chr7_+_98844586 0.608 BUD31
BUD31 homolog (S. cerevisiae)
chr17_-_34234931 0.603 CWC25
CWC25 spliceosome-associated protein homolog (S. cerevisiae)
chr14_+_75114692 0.599 NM_017791
FLVCR2
feline leukemia virus subgroup C cellular receptor family, member 2

Gene Ontology Analysis

Gene overrepresentation in process category:

enrichment   p-value GO term description
4.69 5.99e-05 GO:0030031 cell projection assembly
6.93 4.06e-04 GO:0042384 cilium assembly
5.34 2.63e-03 GO:0060271 cilium morphogenesis
4.21 1.63e-02 GO:0010927 cellular component assembly involved in morphogenesis

Gene overrepresentation in compartment category:

enrichment   p-value GO term description
6.32 2.25e-07 GO:0005930 axoneme
6.70 1.06e-05 GO:0035085 cilium axoneme
5.08 5.57e-05 GO:0044441 cilium part
3.26 1.14e-04 GO:0005929 cilium
1.93 8.58e-04 GO:0015630 microtubule cytoskeleton
2.48 1.15e-03 GO:0005874 microtubule
5.15 5.51e-03 GO:0005932 microtubule basal body
1.17 6.46e-03 GO:0005737 cytoplasm
4.82 1.02e-02 GO:0019861 flagellum
1.55 3.69e-02 GO:XXXXXXX unannotated

Gene overrepresentation in function category:

enrichment   p-value GO term description
1.43 2.48e-02 GO:0017076 purine nucleotide binding
1.43 3.08e-02 GO:0032553 ribonucleotide binding
1.43 3.08e-02 GO:0032555 purine ribonucleotide binding