Motif ID: VSX1,2.p2

Z-value: 0.382


Transcription factors associated with VSX1,2.p2:

Gene SymbolEntrez IDGene Name
VSX1 30813 visual system homeobox 1
VSX2 338917 visual system homeobox 2

Activity-expression correlation:

GenePromoterPearsonP-valuePlot
VSX1chr20_-_25010756-0.342.0e-01Click!
VSX2chr14_+_737759270.322.2e-01Click!


Activity profile for motif VSX1,2.p2.

activity profile for motif VSX1,2.p2


Sorted Z-values histogram for motif VSX1,2.p2

Sorted Z-values for motif VSX1,2.p2



Network of associatons between targets according to the STRING database.



First level regulatory network of VSX1,2.p2

PNG image of the network

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Top targets:


Promoter Score Refseq Gene Symbol Gene Name
chr4_+_78651929 0.496 NM_006419
CXCL13
chemokine (C-X-C motif) ligand 13
chr10_-_56230953 0.435 NM_001142763
NM_001142764
NM_001142765
NM_001142766
NM_001142767
NM_001142768
NM_001142769
NM_001142770
NM_001142771
NM_001142772
NM_001142773
NM_033056
PCDH15











protocadherin-related 15











chr7_+_37689903 0.403


chr5_+_127012611 0.333 NM_001048252
CTXN3
cortexin 3
chr11_+_17697685 0.299 NM_002478
MYOD1
myogenic differentiation 1
chr11_-_128567302 0.266 NM_001142685
ARHGAP32
Rho GTPase activating protein 32
chr1_-_188713324 0.254 NM_199051
FAM5C
family with sequence similarity 5, member C
chr2_+_143351536 0.251 NM_001032998
NM_003937
KYNU

kynureninase

chr6_-_166960496 0.239 RPS6KA2
ribosomal protein S6 kinase, 90kDa, polypeptide 2
chr21_-_34820916 0.238 NM_203418
RCAN1
regulator of calcineurin 1
chr3_+_182900081 0.221 SOX2OT
SOX2 overlapping transcript (non-protein coding)
chr2_+_17861266 0.193 NM_001105569
MSGN1
mesogenin 1
chr8_-_42742729 0.191 NM_004198
CHRNA6
cholinergic receptor, nicotinic, alpha 6
chr4_-_169476391 0.181 NM_017631
DDX60
DEAD (Asp-Glu-Ala-Asp) box polypeptide 60
chr4_-_66218777 0.171 EPHA5
EPH receptor A5
chr3_+_190147633 0.159 TPRG1
tumor protein p63 regulated 1
chr4_+_70831387 0.159 NM_001025104
NM_001890
CSN1S1

casein alpha s1

chr6_-_166960690 0.153 NM_021135
RPS6KA2
ribosomal protein S6 kinase, 90kDa, polypeptide 2
chr8_-_10550026 0.149 NM_178857
RP1L1
retinitis pigmentosa 1-like 1
chr10_+_96433240 0.148 NM_000772
NM_001128925
CYP2C18

cytochrome P450, family 2, subfamily C, polypeptide 18

chr1_-_156635879 0.147 NM_001004475
OR10T2
olfactory receptor, family 10, subfamily T, member 2
chr1_-_103269356 0.144 COL11A1
collagen, type XI, alpha 1
chr6_-_33016561 0.141 NM_002118
HLA-DMB
major histocompatibility complex, class II, DM beta
chr18_+_59705918 0.139 NM_001143818
NM_002575
SERPINB2

serpin peptidase inhibitor, clade B (ovalbumin), member 2

chr1_+_28637247 0.132 NM_023923
PHACTR4
phosphatase and actin regulator 4
chr1_-_42549347 0.131


chr6_+_55300225 0.123 NM_207410
GFRAL
GDNF family receptor alpha like
chr11_-_117640407 0.120 NM_005797
NM_144765
MPZL2

myelin protein zero-like 2

chr10_-_69736600 0.120 PBLD
phenazine biosynthesis-like protein domain containing
chr16_+_54072969 0.119 NM_001127891
MMP2
matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)
chr12_-_15706340 0.113 EPS8
epidermal growth factor receptor pathway substrate 8
chr21_-_30642794 0.111 NM_181624
KRTAP23-1
keratin associated protein 23-1
chr4_+_169654742 0.110 NM_001166108
NM_016081
PALLD

palladin, cytoskeletal associated protein

chr8_+_67201684 0.109 NM_033058
NM_184085
NM_184086
NM_184087
TRIM55



tripartite motif containing 55



chrX_+_43400350 0.109 NM_000240
MAOA
monoamine oxidase A
chr3_-_25654659 0.108 TOP2B
topoisomerase (DNA) II beta 180kDa
chr1_+_100776280 0.100 NM_022049
GPR88
G protein-coupled receptor 88
chr14_-_59264044 0.099 NM_206857
RTN1
reticulon 1
chr10_-_92671005 0.097 NM_014391
ANKRD1
ankyrin repeat domain 1 (cardiac muscle)
chr2_-_99238001 0.095 NM_175735
LYG2
lysozyme G-like 2
chr7_-_83662152 0.095 NM_006080
SEMA3A
sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
chr6_-_166960649 0.094 RPS6KA2
ribosomal protein S6 kinase, 90kDa, polypeptide 2
chr11_-_4371463 0.093 NM_003141
TRIM21
tripartite motif containing 21
chr11_-_128399218 0.093 NM_014715
ARHGAP32
Rho GTPase activating protein 32
chr10_+_18729518 0.093 NM_201570
CACNB2
calcium channel, voltage-dependent, beta 2 subunit
chr6_-_112033752 0.093 TRAF3IP2
TRAF3 interacting protein 2
chr11_-_55815113 0.091 NM_001005199
OR8H1
olfactory receptor, family 8, subfamily H, member 1
chr11_+_59920062 0.089 NM_001079692
NM_032597
MS4A14

membrane-spanning 4-domains, subfamily A, member 14

chr2_+_207512522 0.088 NM_173077
CPO
carboxypeptidase O
chr1_+_145892190 0.087 NM_001097616
GPR89C
G protein-coupled receptor 89C
chrX_+_79562601 0.086 NM_152630
FAM46D
family with sequence similarity 46, member D
chr3_+_70068440 0.084 NM_000248
NM_001184968
NM_198158
NM_198178
MITF



microphthalmia-associated transcription factor



chr16_-_71650034 0.080 NM_001164766
ZFHX3
zinc finger homeobox 3
chr17_-_36403910 0.079 NM_033185
KRTAP3-3
keratin associated protein 3-3
chrX_-_107221405 0.075 NM_002814
NM_170750
PSMD10

proteasome (prosome, macropain) 26S subunit, non-ATPase, 10

chr11_+_59804634 0.074 NM_148975
MS4A4A
membrane-spanning 4-domains, subfamily A, member 4
chr15_-_53350383 0.070 NM_183236
RAB27A
RAB27A, member RAS oncogene family
chr14_+_31868229 0.069 NM_004274
AKAP6
A kinase (PRKA) anchor protein 6
chr7_-_87180499 0.069 NM_000927
ABCB1
ATP-binding cassette, sub-family B (MDR/TAP), member 1
chr1_+_28134090 0.069 NM_001009568
NM_014474
SMPDL3B

sphingomyelin phosphodiesterase, acid-like 3B

chr6_+_127940011 0.066 NM_001010905
C6orf58
chromosome 6 open reading frame 58
chr22_+_39789945 0.062


chr7_+_2524022 0.061 NM_002304
LFNG
LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
chr8_+_22266256 0.060 PIWIL2
piwi-like 2 (Drosophila)
chr11_-_30910074 0.059 NM_020869
DCDC5
doublecortin domain containing 5
chr1_+_158426908 0.058 NM_001231
CASQ1
calsequestrin 1 (fast-twitch, skeletal muscle)
chrX_+_43400475 0.055 MAOA
monoamine oxidase A
chr17_+_18027816 0.055 ALKBH5
alkB, alkylation repair homolog 5 (E. coli)
chr4_+_70928718 0.054 NM_000200
HTN3
histatin 3
chr1_+_175406685 0.051 FAM5B
family with sequence similarity 5, member B
chr10_+_126620681 0.050 NM_017580
ZRANB1
zinc finger, RAN-binding domain containing 1
chr9_-_19778590 0.049 NM_001193288
NM_020344
SLC24A2

solute carrier family 24 (sodium/potassium/calcium exchanger), member 2

chr19_-_41514390 0.049


chr8_+_54926920 0.048 NM_170587
RGS20
regulator of G-protein signaling 20
chr4_-_90197140 0.044 NM_014883
FAM13A
family with sequence similarity 13, member A
chr6_-_87861492 0.043 NM_000735
CGA
glycoprotein hormones, alpha polypeptide
chr19_+_4720144 0.043 C19orf30
chromosome 19 open reading frame 30
chr2_-_65013070 0.043 LOC400958
hypothetical LOC400958
chr1_-_108032645 0.043 NM_001079874
VAV3
vav 3 guanine nucleotide exchange factor
chr12_-_25041639 0.043 NM_001101339
C12orf77
chromosome 12 open reading frame 77
chr4_-_68793928 0.041 NM_182502
TMPRSS11B
transmembrane protease, serine 11B
chrX_-_138617994 0.041 NM_001099855
NM_001171876
MCF2

MCF.2 cell line derived transforming sequence

chr3_-_102522093 0.039 NM_016247
IMPG2
interphotoreceptor matrix proteoglycan 2
chr7_-_30032649 0.039 NM_017946
FKBP14
FK506 binding protein 14, 22 kDa
chr10_-_50066386 0.038 NM_001010863
C10orf128
chromosome 10 open reading frame 128
chr6_+_121798443 0.038 NM_000165
GJA1
gap junction protein, alpha 1, 43kDa
chr17_+_7732759 0.037 NM_001005273
NM_005852
CHD3

chromodomain helicase DNA binding protein 3

chr5_-_24535386 0.037 NM_001190450
CDH10
cadherin 10, type 2 (T2-cadherin)
chr3_-_109730858 0.036 NM_014981
MYH15
myosin, heavy chain 15
chr12_-_51233001 0.036 NM_033448
KRT71
keratin 71
chr12_+_103677388 0.035 CHST11
carbohydrate (chondroitin 4) sulfotransferase 11
chr8_-_62764839 0.034 NM_001164750
NM_001164751
NM_001164752
NM_001164753
NM_020164
NM_032467
NM_032468
ASPH






aspartate beta-hydroxylase






chr5_+_71438796 0.034 NM_005909
MAP1B
microtubule-associated protein 1B
chr1_-_171441234 0.033 TNFSF4
tumor necrosis factor (ligand) superfamily, member 4
chr12_-_55979413 0.032


chr13_+_47948586 0.032 RB1
retinoblastoma 1
chr1_+_144183811 0.032 ANKRD34A
ankyrin repeat domain 34A
chr14_-_94306104 0.032 NM_173849
GSC
goosecoid homeobox
chr1_+_198263352 0.031 NM_003822
NM_205860
NR5A2

nuclear receptor subfamily 5, group A, member 2

chr11_-_117640078 0.031


chr10_+_95362334 0.030 NM_006204
PDE6C
phosphodiesterase 6C, cGMP-specific, cone, alpha prime
chr3_-_168674502 0.029 NM_006217
SERPINI2
serpin peptidase inhibitor, clade I (pancpin), member 2
chr10_-_98311813 0.029 TM9SF3
transmembrane 9 superfamily member 3
chr8_+_39911630 0.028 NM_194294
IDO2
indoleamine 2,3-dioxygenase 2
chrX_+_43400385 0.028 MAOA
monoamine oxidase A
chr6_-_52818851 0.028 NM_153699
GSTA5
glutathione S-transferase alpha 5
chr1_-_45862225 0.027 NM_001114938
NM_001190182
CCDC17

coiled-coil domain containing 17

chr9_+_115396020 0.027 NM_144489
RGS3
regulator of G-protein signaling 3
chr14_+_66901237 0.026 EIF2S1
eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
chr8_-_17787342 0.026 FGL1
fibrinogen-like 1
chr5_+_175041069 0.025 NM_022304
HRH2
histamine receptor H2
chr13_-_33148899 0.025 STARD13
StAR-related lipid transfer (START) domain containing 13
chr4_+_5577783 0.024 NM_005750
C4orf6
chromosome 4 open reading frame 6
chr12_-_55960501 0.024 R3HDM2
R3H domain containing 2
chr5_-_56814310 0.024 NM_001017992
ACTBL2
actin, beta-like 2
chr11_-_36576352 0.024 NM_000536
RAG2
recombination activating gene 2
chr2_-_80385227 0.024 LRRTM1
leucine rich repeat transmembrane neuronal 1
chr2_+_202379442 0.024 NM_139158
CDK15
cyclin-dependent kinase 15
chr19_-_51829778 0.024 NM_033258
GNG8
guanine nucleotide binding protein (G protein), gamma 8
chr7_-_99612757 0.024 NM_152742
GPC2
glypican 2
chr15_+_97990705 0.023 NM_001130928
MEF2A
myocyte enhancer factor 2A
chr1_+_111571803 0.022 NM_001025197
NM_004000
CHI3L2

chitinase 3-like 2

chr18_-_65775139 0.022 NM_006566
CD226
CD226 molecule
chr10_+_5126613 0.022 AKR1C3
aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)
chr11_-_89181390 0.022 NM_020358
TRIM49
tripartite motif containing 49
chr11_-_117640166 0.021 MPZL2
myelin protein zero-like 2
chr17_+_12510030 0.021 MYOCD
myocardin
chr4_+_74499651 0.021 ALB
albumin
chr20_+_58004811 0.020 NM_021810
CDH26
cadherin 26
chr12_-_119733062 0.019 SPPL3
signal peptide peptidase 3
chr6_+_151688327 0.019 NM_144497
AKAP12
A kinase (PRKA) anchor protein 12
chrX_+_55951280 0.018


chr2_-_20390601 0.018 NM_015317
PUM2
pumilio homolog 2 (Drosophila)
chr6_+_29534109 0.016 NM_030883
OR2H1
olfactory receptor, family 2, subfamily H, member 1
chr18_+_3437607 0.016 NM_173207
TGIF1
TGFB-induced factor homeobox 1
chr14_+_75058591 0.015 BATF
basic leucine zipper transcription factor, ATF-like
chr19_-_45611110 0.015 NM_020956
NM_181882
PRX

periaxin

chr15_-_40236061 0.015 NM_213600
PLA2G4F
phospholipase A2, group IVF
chr7_-_63660889 0.015 NM_001130022
NM_178558
ZNF680

zinc finger protein 680

chr15_-_64644758 0.015 NM_207338
LCTL
lactase-like
chr7_+_141457977 0.015 LOC93432
maltase-glucoamylase-like pseudogene
chr2_-_101291483 0.014 NM_173647
RNF149
ring finger protein 149
chr11_+_59979857 0.013 NM_021950
NM_152866
MS4A1

membrane-spanning 4-domains, subfamily A, member 1

chr4_-_122357104 0.013 NM_001128843
TNIP3
TNFAIP3 interacting protein 3
chr10_+_5126589 0.013 AKR1C3
aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)
chr7_+_128136347 0.013 FAM71F1
family with sequence similarity 71, member F1
chr8_+_9450832 0.012 TNKS
tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase
chr5_-_9683462 0.012 NM_019599
TAS2R1
taste receptor, type 2, member 1
chr8_+_23483422 0.012 SLC25A37
solute carrier family 25, member 37
chr3_+_110338250 0.012 FLJ22763
hypothetical LOC401081
chr14_+_101345878 0.011 NM_002719
NM_178586
NM_178587
PPP2R5C


protein phosphatase 2, regulatory subunit B', gamma


chr22_+_42726423 0.011 NM_001003828
PARVB
parvin, beta
chr9_+_131937163 0.011 GPR107
G protein-coupled receptor 107
chr8_+_9450800 0.010 TNKS
tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase
chr3_+_196933422 0.009 NM_152673
MUC20
mucin 20, cell surface associated
chr20_-_49852353 0.009 NM_020436
SALL4
sal-like 4 (Drosophila)
chr3_+_99350859 0.009 NM_001005514
OR5H14
olfactory receptor, family 5, subfamily H, member 14
chr19_-_7604569 0.009 NM_174895
PCP2
Purkinje cell protein 2
chr17_-_71448700 0.009 NM_001080542
FBF1
Fas (TNFRSF6) binding factor 1
chr6_+_64289585 0.007 PTP4A1
protein tyrosine phosphatase type IVA, member 1
chr3_-_127810087 0.007 NM_001039783
TXNRD3IT1
thioredoxin reductase 3 intronic transcript 1
chr1_-_149698272 0.007 POGZ
pogo transposable element with ZNF domain
chr12_+_100394787 0.006 NM_152323
SPIC
Spi-C transcription factor (Spi-1/PU.1 related)
chr18_+_44319365 0.006 NM_001142397
NM_014772
CTIF

CBP80/20-dependent translation initiation factor

chr11_+_89403921 0.006 NM_001195234
TRIM49
TRIM49L2
tripartite motif containing 49
tripartite motif containing 49-like 2
chr16_-_20246309 0.005 NM_001007240
NM_001007241
NM_001007242
NM_001502
GP2



glycoprotein 2 (zymogen granule membrane)



chr3_-_173911467 0.005 NM_001146276
NM_001146277
NM_001146278
NM_020792
NCEH1



neutral cholesterol ester hydrolase 1



chr3_+_113200275 0.005 NM_001008272
NM_013259
TAGLN3

transgelin 3

chr19_+_54708302 0.005 FCGRT
Fc fragment of IgG, receptor, transporter, alpha
chr12_+_91620749 0.004 NM_001037671
NM_001178097
C12orf74

chromosome 12 open reading frame 74

chr5_-_39430180 0.003 DAB2
disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)
chr13_-_34948758 0.003 NM_005584
MAB21L1
mab-21-like 1 (C. elegans)
chr15_-_70350609 0.003 NM_020214
PARP6
poly (ADP-ribose) polymerase family, member 6
chr2_+_128119908 0.003 NM_001161415
NM_001161416
NM_001161417
NM_005291
GPR17



G protein-coupled receptor 17



chr11_-_33870411 0.002 NM_005574
LMO2
LIM domain only 2 (rhombotin-like 1)
chr1_+_173111306 0.001 NM_001035230
RABGAP1L
RAB GTPase activating protein 1-like
chr11_-_5279750 0.001 NM_033179
OR51B4
olfactory receptor, family 51, subfamily B, member 4
chrX_-_24600661 0.001 NM_001163264
PCYT1B
phosphate cytidylyltransferase 1, choline, beta
chr17_-_26648375 0.001 NM_002544
OMG
oligodendrocyte myelin glycoprotein
chr1_-_27825633 0.001 NM_001042729
FGR
Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog

Gene Ontology Analysis

Nothing significant found in process category.

Nothing significant found in compartment category.

Nothing significant found in function category.