Motif ID: LHX3,4.p2

Z-value: 1.099


Transcription factors associated with LHX3,4.p2:

Gene SymbolEntrez IDGene Name
LHX3 8022 LIM homeobox 3
LHX4 89884 LIM homeobox 4



Activity profile for motif LHX3,4.p2.

activity profile for motif LHX3,4.p2


Sorted Z-values histogram for motif LHX3,4.p2

Sorted Z-values for motif LHX3,4.p2



Network of associatons between targets according to the STRING database.



First level regulatory network of LHX3,4.p2

PNG image of the network

In order to view interactive SVG image please either update your browser to latest version or install SVG plugin.


View svg image
View png image


Top targets:


Promoter Score Refseq Gene Symbol Gene Name
chr5_-_88155360 3.014 NM_001193348
NM_001193349
MEF2C

myocyte enhancer factor 2C

chr19_-_56612653 2.861 NM_001171156
NM_001171157
NM_001171158
NM_001171159
NM_001171160
NM_001171161
NM_033130
SIGLEC10






sialic acid binding Ig-like lectin 10






chr17_+_19917420 1.938 SPECC1
sperm antigen with calponin homology and coiled-coil domains 1
chr1_+_117345894 1.646 NM_004258
CD101
CD101 molecule
chr12_+_52696908 1.477 NM_014620
NM_153693
HOXC4
HOXC6
homeobox C4
homeobox C6
chr12_+_52697160 1.399 HOXC5
HOXC6
homeobox C5
homeobox C6
chr1_+_196874839 1.273 PTPRC
protein tyrosine phosphatase, receptor type, C
chr3_-_57209319 1.231 NM_003865
HESX1
HESX homeobox 1
chr12_-_101396459 1.210 NM_001111284
IGF1
insulin-like growth factor 1 (somatomedin C)
chr5_+_67622242 1.142 NM_181504
PIK3R1
phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
chr13_-_83354425 1.054 SLITRK1
SLIT and NTRK-like family, member 1
chr5_+_156628929 1.048 NM_014376
CYFIP2
cytoplasmic FMR1 interacting protein 2
chr16_+_11966464 1.027 NM_001192
TNFRSF17
tumor necrosis factor receptor superfamily, member 17
chr10_-_50066386 1.008 NM_001010863
C10orf128
chromosome 10 open reading frame 128
chr7_+_90177082 0.976 CDK14
cyclin-dependent kinase 14
chr7_+_37689903 0.969


chr22_+_38627031 0.959 NM_004810
GRAP2
GRB2-related adaptor protein 2
chr10_+_35466715 0.957 NM_183011
NM_183012
CREM

cAMP responsive element modulator

chr12_+_52708460 0.944 NM_004503
HOXC6
homeobox C6
chr3_+_63928459 0.939 NM_001128149
ATXN7
ataxin 7
chr12_-_10173947 0.938 NM_022570
NM_197947
NM_197948
NM_197949
NM_197950
NM_197954
CLEC7A





C-type lectin domain family 7, member A





chr22_+_38627129 0.931 GRAP2
GRB2-related adaptor protein 2
chr10_+_91488704 0.926 KIF20B
kinesin family member 20B
chr1_-_114215768 0.921 NM_001193431
NM_012411
NM_015967
PTPN22


protein tyrosine phosphatase, non-receptor type 22 (lymphoid)


chr9_-_205892 0.906 NM_152569
C9orf66
chromosome 9 open reading frame 66
chr20_-_51633042 0.905 NM_006526
ZNF217
zinc finger protein 217
chr13_-_98708549 0.898 NM_001098200
NM_005292
GPR18

G protein-coupled receptor 18

chr7_+_128802719 0.886 NM_001130722
AHCYL2
adenosylhomocysteinase-like 2
chr8_-_42742729 0.878 NM_004198
CHRNA6
cholinergic receptor, nicotinic, alpha 6
chr2_-_215711313 0.860 NM_173076
ABCA12
ATP-binding cassette, sub-family A (ABC1), member 12
chr6_+_152053323 0.833 NM_001122742
ESR1
estrogen receptor 1
chr2_+_161981138 0.804 TBR1
T-box, brain, 1
chr19_-_53841064 0.796 NM_001217
CA11
carbonic anhydrase XI
chr3_-_143230124 0.775 NM_001178141
NM_001178142
NM_006286
TFDP2


transcription factor Dp-2 (E2F dimerization partner 2)


chr5_-_22889192 0.747 CDH12
cadherin 12, type 2 (N-cadherin 2)
chrX_+_70682204 0.742 OGT
O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)
chr3_+_46386636 0.738 NM_000579
NM_001100168
CCR5

chemokine (C-C motif) receptor 5

chr3_+_123385219 0.736 NM_000388
CASR
calcium-sensing receptor
chr1_-_158815895 0.707 NM_001184879
NM_001184881
NM_001184882
NM_003874
CD84



CD84 molecule



chr18_+_59767567 0.702 NM_001123366
HMSD
histocompatibility (minor) serpin domain containing
chr19_+_14554895 0.702 NM_207390
CLEC17A
C-type lectin domain family 17, member A
chr2_+_161981046 0.683 TBR1
T-box, brain, 1
chr3_+_179759181 0.681 NM_005832
KCNMB2
potassium large conductance calcium-activated channel, subfamily M, beta member 2
chr20_+_56919233 0.678 GNAS
GNAS complex locus
chr7_-_13992351 0.678 NM_001163150
NM_001163151
NM_001163152
ETV1


ets variant 1


chr13_+_23042722 0.677 NM_148957
TNFRSF19
tumor necrosis factor receptor superfamily, member 19
chr4_+_166350620 0.676 NM_001161521
NM_001161522
KLHL2

kelch-like 2, Mayven (Drosophila)

chrX_-_10761729 0.666 NM_033290
MID1
midline 1 (Opitz/BBB syndrome)
chrX_-_13744933 0.644 GPM6B
glycoprotein M6B
chr11_+_59979857 0.640 NM_021950
NM_152866
MS4A1

membrane-spanning 4-domains, subfamily A, member 1

chr7_-_25234582 0.624 NM_022150
NPVF
neuropeptide VF precursor
chr12_-_51887266 0.605 NM_000889
ITGB7
integrin, beta 7
chr12_+_9871343 0.603 NM_016523
KLRF1
killer cell lectin-like receptor subfamily F, member 1
chr13_+_47948586 0.599 RB1
retinoblastoma 1
chr2_-_158008763 0.598 NM_004288
CYTIP
cytohesin 1 interacting protein
chr12_+_15590811 0.586 PTPRO
protein tyrosine phosphatase, receptor type, O
chr3_+_99733432 0.578 NM_005290
GPR15
G protein-coupled receptor 15
chr1_+_173111306 0.571 NM_001035230
RABGAP1L
RAB GTPase activating protein 1-like
chr9_+_124173143 0.569 PTGS1
prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)
chr2_-_207291364 0.565 NM_001093730
DYTN
dystrotelin
chr1_+_196874867 0.563 PTPRC
protein tyrosine phosphatase, receptor type, C
chr4_-_176970372 0.558 GPM6A
glycoprotein M6A
chr9_+_124173049 0.554 NM_000962
NM_080591
PTGS1

prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)

chr1_-_149681265 0.540 NM_207171
POGZ
pogo transposable element with ZNF domain
chr7_-_132371208 0.539 EEF1G
eukaryotic translation elongation factor 1 gamma
chr4_+_72423633 0.538 NM_003759
SLC4A4
solute carrier family 4, sodium bicarbonate cotransporter, member 4
chr12_-_51887318 0.535 ITGB7
integrin, beta 7
chr7_+_77307382 0.529 NM_001127357
NM_001127359
NM_020432
PHTF2


putative homeodomain transcription factor 2


chr2_+_68815416 0.529 NM_001007231
NM_001166277
ARHGAP25

Rho GTPase activating protein 25

chr12_-_52281050 0.518 NM_001130059
ATF7
activating transcription factor 7
chrX_+_37524190 0.514 NM_000397
CYBB
cytochrome b-245, beta polypeptide
chr7_+_90176647 0.511 NM_012395
CDK14
cyclin-dependent kinase 14
chr12_+_8499788 0.504 NM_001007033
CLEC6A
C-type lectin domain family 6, member A
chr11_-_26550243 0.504 NM_001135091
NM_001135092
NM_145650
MUC15


mucin 15, cell surface associated


chr6_-_32265489 0.502 NM_002586
PBX2
pre-B-cell leukemia homeobox 2
chr7_+_94135384 0.498 PEG10
paternally expressed 10
chr7_-_7724762 0.498 NM_002947
RPA3
replication protein A3, 14kDa
chr13_-_83354474 0.494 NM_052910
SLITRK1
SLIT and NTRK-like family, member 1
chr12_+_91620749 0.493 NM_001037671
NM_001178097
C12orf74

chromosome 12 open reading frame 74

chr3_-_110155237 0.470 NM_005459
GUCA1C
guanylate cyclase activator 1C
chr11_-_58032153 0.462 NM_001005218
OR5B21
olfactory receptor, family 5, subfamily B, member 21
chr21_+_29374743 0.454 NM_020152
C21orf7
chromosome 21 open reading frame 7
chr12_-_101398429 0.451 IGF1
insulin-like growth factor 1 (somatomedin C)
chr2_-_80384454 0.451 LRRTM1
leucine rich repeat transmembrane neuronal 1
chr6_+_53043729 0.445 NM_012347
FBXO9
F-box protein 9
chr7_-_122627235 0.441 NM_022444
SLC13A1
solute carrier family 13 (sodium/sulfate symporters), member 1
chr2_+_161980865 0.441 NM_006593
TBR1
T-box, brain, 1
chr1_+_196874759 0.440 NM_002838
NM_080921
NM_080923
PTPRC


protein tyrosine phosphatase, receptor type, C


chr5_-_1935764 0.439 NM_016358
IRX4
iroquois homeobox 4
chr12_-_25041639 0.434 NM_001101339
C12orf77
chromosome 12 open reading frame 77
chr17_-_1195096 0.433 PAFAH1B1
platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)
chr15_-_70350609 0.432 NM_020214
PARP6
poly (ADP-ribose) polymerase family, member 6
chr4_-_176970895 0.431 GPM6A
glycoprotein M6A
chr4_+_38740246 0.430 NM_015990
NM_199039
KLHL5

kelch-like 5 (Drosophila)

chr9_+_124172644 0.427 PTGS1
prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)
chrX_+_37524250 0.426 CYBB
cytochrome b-245, beta polypeptide
chr6_+_31538934 0.426 NM_006674
HCP5
HLA complex P5
chr11_-_58099884 0.421 NM_004811
LPXN
leupaxin
chr3_+_188222337 0.418 NM_003032
ST6GAL1
ST6 beta-galactosamide alpha-2,6-sialyltranferase 1
chr3_-_55489973 0.415 WNT5A
wingless-type MMTV integration site family, member 5A
chr3_-_168674502 0.409 NM_006217
SERPINI2
serpin peptidase inhibitor, clade I (pancpin), member 2
chr1_+_246682699 0.406 NM_001004136
OR2T2
olfactory receptor, family 2, subfamily T, member 2
chr9_+_124172606 0.396 PTGS1
prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)
chr1_+_166516901 0.394 NM_005149
TBX19
T-box 19
chr16_-_66075216 0.393 NM_001138
AGRP
agouti related protein homolog (mouse)
chrX_-_55074125 0.389 NM_000032
NM_001037967
NM_001037968
ALAS2


aminolevulinate, delta-, synthase 2


chr7_-_86433139 0.386 NM_152748
KIAA1324L
KIAA1324-like
chr7_-_36730525 0.385 NM_001177506
NM_001177507
NM_001637
AOAH


acyloxyacyl hydrolase (neutrophil)


chr8_+_98772537 0.385 MTDH
metadherin
chr11_-_35235325 0.385 SLC1A2
solute carrier family 1 (glial high affinity glutamate transporter), member 2
chr12_-_101036407 0.385 NM_024057
NUP37
nucleoporin 37kDa
chr4_-_176970407 0.376 GPM6A
glycoprotein M6A
chr8_-_7207899 0.376 NM_001164457
ZNF705G
zinc finger protein 705G
chr9_-_116305273 0.373 NM_001083885
DFNB31
deafness, autosomal recessive 31
chr2_-_175170674 0.372 WIPF1
WAS/WASL interacting protein family, member 1
chr6_+_31661934 0.372 NM_205838
NM_205839
LST1

leukocyte specific transcript 1

chr17_-_38087366 0.371 NM_016602
CCR10
chemokine (C-C motif) receptor 10
chrX_+_99726445 0.366 NM_022144
TNMD
tenomodulin
chr3_-_11598829 0.364 NM_001128220
VGLL4
vestigial like 4 (Drosophila)
chr9_+_92603832 0.363 NM_001135052
NM_003177
SYK

spleen tyrosine kinase

chr5_+_60969392 0.361 NM_173667
FLJ37543
hypothetical protein FLJ37543
chr14_+_74968589 0.360 NM_001135049
JDP2
Jun dimerization protein 2
chr14_-_106249999 0.360 IGHA1
immunoglobulin heavy constant alpha 1
chr3_+_123779122 0.359 NM_001113523
PARP15
poly (ADP-ribose) polymerase family, member 15
chr5_+_140772691 0.358 NM_018913
NM_032090
PCDHGA10

protocadherin gamma subfamily A, 10

chr16_-_3567354 0.354 NM_178844
NLRC3
NLR family, CARD domain containing 3
chr8_+_32905027 0.351


chr6_-_76022565 0.348 TMEM30A
transmembrane protein 30A
chr3_+_161425946 0.342 NM_001168214
LOC401097
hypothetical protein LOC401097
chr16_+_2749934 0.341


chr4_-_185921384 0.338 ACSL1
acyl-CoA synthetase long-chain family member 1
chr17_-_9863929 0.337 GAS7
growth arrest-specific 7
chr12_-_16652202 0.337 NM_001001395
LMO3
LIM domain only 3 (rhombotin-like 2)
chr8_-_101384633 0.335 NM_015435
RNF19A
ring finger protein 19A
chr1_+_13903936 0.334 NM_012231
NM_015866
PRDM2

PR domain containing 2, with ZNF domain

chr21_-_30510113 0.333 NM_199328
CLDN8
claudin 8
chr18_+_27281729 0.332 NM_001944
DSG3
desmoglein 3
chr4_-_77163609 0.332 NM_001565
CXCL10
chemokine (C-X-C motif) ligand 10
chr1_+_157067729 0.330 NM_002432
MNDA
myeloid cell nuclear differentiation antigen
chr2_-_65013070 0.326 LOC400958
hypothetical LOC400958
chrX_+_115215985 0.323 NM_000686
AGTR2
angiotensin II receptor, type 2
chr7_+_28418668 0.322 NM_182898
CREB5
cAMP responsive element binding protein 5
chr1_-_152845399 0.321 NM_001193495
ADAR
adenosine deaminase, RNA-specific
chr8_-_72436519 0.320 EYA1
eyes absent homolog 1 (Drosophila)
chr6_+_167445284 0.318 NM_004367
CCR6
chemokine (C-C motif) receptor 6
chr3_-_159872960 0.317 NM_020169
LXN
latexin
chr1_+_242283129 0.314 NM_006352
ZNF238
zinc finger protein 238
chr8_-_82536312 0.312 NM_001080526
FABP9
fatty acid binding protein 9, testis
chr4_+_88790477 0.308 NM_001079911
NM_004407
DMP1

dentin matrix acidic phosphoprotein 1

chr7_+_129057152 0.307 NM_001040110
NRF1
nuclear respiratory factor 1
chr12_+_54672766 0.307 RAB5B
RAB5B, member RAS oncogene family
chr6_+_31691745 0.305 NM_032955
AIF1
allograft inflammatory factor 1
chr1_-_155336223 0.302 NM_001004341
ETV3L
ets variant 3-like
chr11_+_33306652 0.300 HIPK3
homeodomain interacting protein kinase 3
chr14_+_66901237 0.298 EIF2S1
eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
chr6_+_158654890 0.298


chrX_+_107174855 0.297 NM_001170553
NM_182607
VSIG1

V-set and immunoglobulin domain containing 1

chr1_+_84540921 0.296 NM_001134664
SAMD13
sterile alpha motif domain containing 13
chr14_+_69307914 0.294 SRSF5
serine/arginine-rich splicing factor 5
chr18_+_70352779 0.293 CNDP1
carnosine dipeptidase 1 (metallopeptidase M20 family)
chr3_-_12561962 0.292 NM_001195279
LOC100129480
hypothetical protein LOC100129480
chr9_-_21375258 0.292 NM_000605
IFNA2
interferon, alpha 2
chr3_+_52212969 0.288 ALAS1
aminolevulinate, delta-, synthase 1
chr3_-_152403636 0.288 NM_013308
GPR171
G protein-coupled receptor 171
chr2_-_191580567 0.287 STAT1
signal transducer and activator of transcription 1, 91kDa
chr5_+_57823017 0.286 NM_152687
GAPT
GRB2-binding adaptor protein, transmembrane
chrX_+_153186602 0.285 NM_001145934
TKTL1
transketolase-like 1
chr15_+_97990705 0.281 NM_001130928
MEF2A
myocyte enhancer factor 2A
chr14_-_105610144 0.280 IGHA1
IGHG1
IGHG3
immunoglobulin heavy constant alpha 1
immunoglobulin heavy constant gamma 1 (G1m marker)
immunoglobulin heavy constant gamma 3 (G3m marker)
chr13_+_51933228 0.279 CKAP2
cytoskeleton associated protein 2
chr1_+_111215343 0.278 NM_001040033
CD53
CD53 molecule
chr1_-_151587645 0.278 NM_020393
PGLYRP4
peptidoglycan recognition protein 4
chr8_-_102872372 0.278 NCALD
neurocalcin delta
chr1_+_40635058 0.277 NM_001198980
SMAP2
small ArfGAP2
chr1_+_158636987 0.277 NM_020335
VANGL2
vang-like 2 (van gogh, Drosophila)
chr1_+_154120170 0.276 SYT11
synaptotagmin XI
chr3_-_166278969 0.276 NM_001041
SI
sucrase-isomaltase (alpha-glucosidase)
chr4_+_71806538 0.274 NM_001037442
NM_014961
RUFY3

RUN and FYVE domain containing 3

chr3_+_45902999 0.274 NM_006641
NM_031200
CCR9

chemokine (C-C motif) receptor 9

chr7_+_110518297 0.272 NM_001099658
NM_001099660
NM_018334
LRRN3


leucine rich repeat neuronal 3


chr12_-_101398503 0.271 NM_000618
NM_001111283
NM_001111285
IGF1


insulin-like growth factor 1 (somatomedin C)


chr6_-_56824371 0.269 DST
dystonin
chr11_-_58368555 0.268 NM_145016
GLYATL2
glycine-N-acyltransferase-like 2
chr19_-_60458915 0.264 PPP6R1
protein phosphatase 6, regulatory subunit 1
chr9_-_14076901 0.264 NFIB
nuclear factor I/B
chr4_-_54152385 0.264 LNX1
ligand of numb-protein X 1
chr7_+_18296569 0.264 HDAC9
histone deacetylase 9
chr6_-_29635680 0.262 NM_006398
UBD
ubiquitin D
chr11_-_102081654 0.262 NM_022122
MMP27
matrix metallopeptidase 27
chr12_-_101398288 0.261 IGF1
insulin-like growth factor 1 (somatomedin C)
chr2_+_161701711 0.258 NM_004180
NM_133484
TANK

TRAF family member-associated NFKB activator

chr1_+_156991133 0.257 NM_001005184
OR6K6
olfactory receptor, family 6, subfamily K, member 6
chr3_-_114047479 0.256 NM_001008784
CD200R1L
CD200 receptor 1-like
chr17_+_18027816 0.253 ALKBH5
alkB, alkylation repair homolog 5 (E. coli)
chrX_+_135558001 0.252 NM_000074
CD40LG
CD40 ligand
chr15_+_100175888 0.250 NM_001001674
OR4F15
olfactory receptor, family 4, subfamily F, member 15
chr13_+_48923688 0.249 NM_001160308
SETDB2
SET domain, bifurcated 2
chr12_-_56422120 0.249 NM_014770
AGAP2
ArfGAP with GTPase domain, ankyrin repeat and PH domain 2
chr5_-_22889487 0.249 NM_004061
CDH12
cadherin 12, type 2 (N-cadherin 2)
chr12_-_101398470 0.247 IGF1
insulin-like growth factor 1 (somatomedin C)

Gene Ontology Analysis

Gene overrepresentation in process category:

enrichment   p-value GO term description
2.52 9.23e-06 GO:0007608 sensory perception of smell
2.30 1.12e-04 GO:0007606 sensory perception of chemical stimulus
1.85 1.40e-03 GO:0007600 sensory perception
1.27 1.54e-03 GO:0032501 multicellular organismal process
1.22 4.55e-03 GO:0050896 response to stimulus
1.48 3.41e-02 GO:0003008 system process

Gene overrepresentation in compartment category:

enrichment   p-value GO term description
1.28 1.32e-03 GO:0071944 cell periphery
1.29 1.37e-03 GO:0005886 plasma membrane

Gene overrepresentation in function category:

enrichment   p-value GO term description
2.16 1.59e-08 GO:0004930 G-protein coupled receptor activity
2.70 1.48e-07 GO:0004984 olfactory receptor activity
1.78 3.32e-06 GO:0004888 transmembrane receptor activity
1.60 4.08e-05 GO:0004872 receptor activity
1.50 1.59e-04 GO:0004871 signal transducer activity
1.50 1.59e-04 GO:0060089 molecular transducer activity
6.70 6.06e-03 GO:0001608 nucleotide receptor activity, G-protein coupled
6.70 6.06e-03 GO:0045028 purinergic nucleotide receptor activity, G-protein coupled
5.24 4.38e-02 GO:0001614 purinergic nucleotide receptor activity
5.24 4.38e-02 GO:0016502 nucleotide receptor activity