Motif ID: RFX1..5_RFXANK_RFXAP.p2

Z-value: 3.003


Transcription factors associated with RFX1..5_RFXANK_RFXAP.p2:

Gene SymbolEntrez IDGene Name
RFX1 5989 regulatory factor X, 1 (influences HLA class II expression)
RFX2 5990 regulatory factor X, 2 (influences HLA class II expression)
RFX3 5991 regulatory factor X, 3 (influences HLA class II expression)
RFX4 5992 regulatory factor X, 4 (influences HLA class II expression)
RFX5 5993 regulatory factor X, 5 (influences HLA class II expression)
RFXANK 8625 regulatory factor X-associated ankyrin-containing protein
RFXAP 5994 regulatory factor X-associated protein



Activity profile for motif RFX1..5_RFXANK_RFXAP.p2.

activity profile for motif RFX1..5_RFXANK_RFXAP.p2


Sorted Z-values histogram for motif RFX1..5_RFXANK_RFXAP.p2

Sorted Z-values for motif RFX1..5_RFXANK_RFXAP.p2



Network of associatons between targets according to the STRING database.



First level regulatory network of RFX1..5_RFXANK_RFXAP.p2

PNG image of the network

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Top targets:


Promoter Score Refseq Gene Symbol Gene Name
chr1_+_42701460 10.271 CCDC30
coiled-coil domain containing 30
chr2_-_187422141 7.732 NM_182521
ZSWIM2
zinc finger, SWIM-type containing 2
chr5_-_157031022 7.527 SOX30
SRY (sex determining region Y)-box 30
chr5_+_157031138 6.193 NM_001145132
C5orf52
chromosome 5 open reading frame 52
chr4_-_156517423 5.837 MAP9
microtubule-associated protein 9
chr18_+_30544193 5.314 NM_001198941
NM_032978
DTNA

dystrobrevin, alpha

chr4_-_156517394 5.172 MAP9
microtubule-associated protein 9
chr19_-_63643400 5.113 NM_003433
ZNF132
zinc finger protein 132
chr12_+_46863632 5.090 NM_001013635
C12orf68
chromosome 12 open reading frame 68
chr7_+_48041632 4.995 NM_001100159
C7orf57
chromosome 7 open reading frame 57
chr8_+_120497732 4.779 NM_002514
NOV
nephroblastoma overexpressed gene
chr12_-_62348506 4.779 NM_173812
DPY19L2
dpy-19-like 2 (C. elegans)
chr4_-_76774594 4.761 NM_003948
CDKL2
cyclin-dependent kinase-like 2 (CDC2-related kinase)
chr18_+_76006795 4.549 LOC100130522
hypothetical LOC100130522
chr4_-_156517544 4.516 NM_001039580
MAP9
microtubule-associated protein 9
chr11_+_7997366 4.344 TUB
tubby homolog (mouse)
chr1_+_159334774 4.294 NM_001007255
NM_152366
KLHDC9

kelch domain containing 9

chr3_+_120904555 4.247 NM_033364
C3orf15
chromosome 3 open reading frame 15
chr13_-_95092283 4.225 DZIP1
DAZ interacting protein 1
chr3_-_114643008 4.186 NM_001164496
NM_018338
WDR52

WD repeat domain 52

chr17_-_16413188 4.138 NM_020653
ZNF287
zinc finger protein 287
chr8_+_13468722 4.113 NM_001007090
C8orf48
chromosome 8 open reading frame 48
chr14_-_88087575 4.070 PTPN21
protein tyrosine phosphatase, non-receptor type 21
chr9_+_111442888 4.055 NM_001037293
PALM2
paralemmin 2
chr15_-_68971665 3.862 NM_020147
THAP10
THAP domain containing 10
chr6_+_43720744 3.780 NM_001193341
NM_152732
RSPH9

radial spoke head 9 homolog (Chlamydomonas)

chr1_-_167663278 3.754 NM_021179
C1orf114
chromosome 1 open reading frame 114
chr3_-_171013000 3.741 LRRC34
leucine rich repeat containing 34
chr1_-_36688556 3.705 NM_145047
NM_206837
OSCP1

organic solute carrier partner 1

chr15_+_68971835 3.693 NM_001199017
NM_017691
NM_001199018
LRRC49


leucine rich repeat containing 49


chr10_-_74788508 3.602 NM_145170
TTC18
tetratricopeptide repeat domain 18
chr6_-_152744143 3.583 SYNE1
spectrin repeat containing, nuclear envelope 1
chr9_+_99109730 3.556 NM_020893
C9orf174
chromosome 9 open reading frame 174
chr8_-_49810270 3.515 NM_001142857
NM_024593
EFCAB1

EF-hand calcium binding domain 1

chr3_+_9826643 3.502 NM_001025930
TTLL3
tubulin tyrosine ligase-like family, member 3
chr3_-_139315011 3.494 NM_001170538
DZIP1L
DAZ interacting protein 1-like
chr7_-_139987044 3.452 DENND2A
DENN/MADD domain containing 2A
chr17_-_959007 3.393 NM_001092
ABR
active BCR-related gene
chr13_-_43259032 3.361 NM_017993
ENOX1
ecto-NOX disulfide-thiol exchanger 1
chr12_+_51979721 3.356 NM_021640
C12orf10
chromosome 12 open reading frame 10
chr9_+_123501186 3.350 DAB2IP
DAB2 interacting protein
chr1_+_153413675 3.327 TRIM46
tripartite motif containing 46
chr10_+_63092724 3.317 NM_173554
C10orf107
chromosome 10 open reading frame 107
chr6_-_152744022 3.310 SYNE1
spectrin repeat containing, nuclear envelope 1
chr11_+_131285747 3.263 NM_001144058
NM_001144059
NM_016522
NTM


neurotrimin


chr11_+_101423378 3.233 NM_001195005
NM_032930
C11orf70

chromosome 11 open reading frame 70

chr13_+_23451919 3.222 SPATA13
spermatogenesis associated 13
chr7_-_35192177 3.208 DPY19L2P1
dpy-19-like 2 pseudogene 1 (C. elegans)
chr4_+_114433551 3.106 ANK2
ankyrin 2, neuronal
chr13_+_30404809 3.079 NM_152325
C13orf26
chromosome 13 open reading frame 26
chr12_+_120840829 3.071 NM_001178003
NM_144668
WDR66

WD repeat domain 66

chr4_+_87734489 3.002 NM_006264
NM_080683
NM_080684
NM_080685
PTPN13



protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)



chr5_+_178919298 2.980 NM_001040451
NM_001040452
RUFY1

RUN and FYVE domain containing 1

chr5_-_14064846 2.922 DNAH5
dynein, axonemal, heavy chain 5
chr3_+_9826930 2.921 TTLL3
tubulin tyrosine ligase-like family, member 3
chr17_-_5345167 2.915 LOC728392
hypothetical protein LOC728392
chr2_+_228444570 2.912 NM_178821
WDR69
WD repeat domain 69
chr12_-_52939636 2.910 NM_001127321
CBX5
chromobox homolog 5
chrX_+_53095230 2.897 NM_018969
GPR173
G protein-coupled receptor 173
chr17_-_5344898 2.892 NM_001162371
LOC728392
hypothetical protein LOC728392
chr2_-_182229977 2.832 NM_001030311
NM_001030312
NM_001030313
NM_001160277
NM_201548
CERKL




ceramide kinase-like




chr18_-_46046771 2.803 NM_145020
CCDC11
coiled-coil domain containing 11
chr3_-_30911156 2.802 NM_207359
GADL1
glutamate decarboxylase-like 1
chr17_-_15185623 2.787 NM_031898
TEKT3
tektin 3
chr3_+_49002774 2.744 P4HTM
prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)
chr17_+_17339059 2.741


chr15_+_79213660 2.701 NM_173528
C15orf26
chromosome 15 open reading frame 26
chr13_+_35904408 2.671 NM_001111045
NM_003914
CCNA1

cyclin A1

chr12_-_80676562 2.648 PPFIA2
protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
chr3_-_42789738 2.610 NM_144719
CCDC13
coiled-coil domain containing 13
chr2_+_45022540 2.591 NM_005413
SIX3
SIX homeobox 3
chr8_-_98359248 2.570 TSPYL5
TSPY-like 5
chr3_-_168580764 2.540 NM_024687
ZBBX
zinc finger, B-box domain containing
chr10_-_116382089 2.539 ABLIM1
actin binding LIM protein 1
chr3_+_38055699 2.533 NM_007335
NM_007337
DLEC1

deleted in lung and esophageal cancer 1

chr8_-_101187346 2.529 RGS22
regulator of G-protein signaling 22
chr17_+_7199178 2.517 NM_198154
TMEM95
transmembrane protein 95
chrX_+_135079461 2.494 NM_001167819
FHL1
four and a half LIM domains 1
chr3_-_171013145 2.481 NM_001172779
NM_001172780
NM_153353
LRRC34


leucine rich repeat containing 34


chr7_-_102707901 2.476 DPY19L2P2
dpy-19-like 2 pseudogene 2 (C. elegans)
chr11_-_65860450 2.452 NM_004292
RIN1
Ras and Rab interactor 1
chr8_+_39084206 2.417 NM_145004
ADAM32
ADAM metallopeptidase domain 32
chr5_-_179712920 2.376 NM_005110
GFPT2
glutamine-fructose-6-phosphate transaminase 2
chr12_+_83954229 2.366 NM_001079910
NM_032165
LRRIQ1

leucine-rich repeats and IQ motif containing 1

chr16_+_56219802 2.352 NM_001145771
NM_001145772
NM_001145773
NM_201524
NM_201525
GPR56




G protein-coupled receptor 56




chr11_-_132318741 2.343 OPCML
opioid binding protein/cell adhesion molecule-like
chr7_+_129919330 2.329 MEST
mesoderm specific transcript homolog (mouse)
chr3_+_185538998 2.307 FAM131A
family with sequence similarity 131, member A
chr1_+_149960636 2.301 NM_001144956
RIIAD1
regulatory subunit of type II PKA R-subunit (RIIa) domain containing 1
chr8_-_98359347 2.270 NM_033512
TSPYL5
TSPY-like 5
chr7_+_129919157 2.263 NM_002402
MEST
mesoderm specific transcript homolog (mouse)
chr7_+_129919134 2.233 MEST
mesoderm specific transcript homolog (mouse)
chr8_-_98359366 2.217 TSPYL5
TSPY-like 5
chr11_-_10671873 2.196 MRVI1
murine retrovirus integration site 1 homolog
chr16_-_66007650 2.194 NM_013304
ZDHHC1
zinc finger, DHHC-type containing 1
chr4_+_40446670 2.187 NM_024677
NSUN7
NOP2/Sun domain family, member 7
chr17_+_9420668 2.187 NM_001080556
NM_145054
WDR16

WD repeat domain 16

chrX_-_99778340 2.182 NM_003270
TSPAN6
tetraspanin 6
chr17_-_61618276 2.180 NM_145036
CCDC46
coiled-coil domain containing 46
chr1_+_201711505 2.177 NM_002725
NM_201348
PRELP

proline/arginine-rich end leucine-rich repeat protein

chr9_-_4656665 2.173 NM_001039395
C9orf68
chromosome 9 open reading frame 68
chr2_+_213857347 2.169 NM_001025436
NM_024532
SPAG16

sperm associated antigen 16

chr14_-_59001603 2.161 GPR135
G protein-coupled receptor 135
chr3_+_48482213 2.155 NM_016381
NM_033629
TREX1

three prime repair exonuclease 1

chr14_+_75114692 2.153 NM_017791
FLVCR2
feline leukemia virus subgroup C cellular receptor family, member 2
chr16_+_4485859 2.130 NM_001127205
HMOX2
heme oxygenase (decycling) 2
chr10_+_105243724 2.129 NM_004210
NEURL
neuralized homolog (Drosophila)
chr12_-_52939584 2.128 NM_001127322
CBX5
chromobox homolog 5
chr12_-_83954185 2.120 NM_001100917
TSPAN19
tetraspanin 19
chr1_-_215870935 2.116 NM_018040
GPATCH2
G patch domain containing 2
chr1_-_51660328 2.088 NM_001159969
EPS15
epidermal growth factor receptor pathway substrate 15
chr4_-_148086413 2.086 NM_031956
TTC29
tetratricopeptide repeat domain 29
chr3_-_50357994 2.081 NM_015896
ZMYND10
zinc finger, MYND-type containing 10
chr1_+_201711578 2.078 PRELP
proline/arginine-rich end leucine-rich repeat protein
chr1_+_15446354 2.076 NM_052929
FHAD1
forkhead-associated (FHA) phosphopeptide binding domain 1
chr14_+_99329198 2.055 NM_001008707
NM_004434
EML1

echinoderm microtubule associated protein like 1

chr17_+_19255083 2.032 NM_007148
RNF112
ring finger protein 112
chr11_+_6998275 2.026 NM_176822
NLRP14
NLR family, pyrin domain containing 14
chr12_+_79362256 2.000 NM_001145026
PTPRQ
protein tyrosine phosphatase, receptor type, Q
chr11_-_6998041 1.997 NM_013249
ZNF214
zinc finger protein 214
chr11_-_75057062 1.981 NM_033063
NM_207577
MAP6

microtubule-associated protein 6

chr22_-_42539399 1.981 NM_022785
NM_198856
EFCAB6

EF-hand calcium binding domain 6

chr12_-_88270375 1.975 NM_001946
NM_022652
DUSP6

dual specificity phosphatase 6

chr12_+_50104936 1.970 SLC4A8
solute carrier family 4, sodium bicarbonate cotransporter, member 8
chr14_-_59001804 1.961 NM_022571
GPR135
G protein-coupled receptor 135
chr11_-_10671736 1.947 MRVI1
murine retrovirus integration site 1 homolog
chr5_-_16795336 1.935 MYO10
myosin X
chr1_+_84402962 1.919 PRKACB
protein kinase, cAMP-dependent, catalytic, beta
chrX_+_135079120 1.900 NM_001159704
FHL1
four and a half LIM domains 1
chr11_-_10671608 1.896 NM_001100167
MRVI1
murine retrovirus integration site 1 homolog
chr3_-_27385856 1.891 NM_199347
NEK10
NIMA (never in mitosis gene a)- related kinase 10
chr12_-_123568781 1.885


chr12_+_50104859 1.867 NM_001039960
NM_004858
SLC4A8

solute carrier family 4, sodium bicarbonate cotransporter, member 8

chr14_-_59407103 1.858 NM_021136
RTN1
reticulon 1
chr8_-_101187519 1.825 NM_015668
RGS22
regulator of G-protein signaling 22
chr1_-_86634511 1.817 NM_001007022
NM_001184765
NM_001184766
NM_020729
ODF2L



outer dense fiber of sperm tails 2-like



chr12_-_88270369 1.790 DUSP6
dual specificity phosphatase 6
chr11_+_85763425 1.774 NM_001156474
NM_021827
CCDC81

coiled-coil domain containing 81

chr7_+_21549357 1.774 NM_003777
DNAH11
dynein, axonemal, heavy chain 11
chr22_-_43272567 1.753 NM_032287
LDOC1L
leucine zipper, down-regulated in cancer 1-like
chr19_+_63237211 1.739 NM_182572
ZSCAN1
zinc finger and SCAN domain containing 1
chr11_-_114880275 1.738 NM_001098517
NM_014333
CADM1

cell adhesion molecule 1

chr15_-_88034857 1.732 NM_003847
PEX11A
peroxisomal biogenesis factor 11 alpha
chr11_+_26310253 1.729 NM_031418
ANO3
anoctamin 3
chr17_+_45940911 1.722 MYCBPAP
MYCBP associated protein
chr5_-_142045770 1.719 NM_000800
FGF1
fibroblast growth factor 1 (acidic)
chrX_+_103243762 1.718 NM_001143978
ZCCHC18
zinc finger, CCHC domain containing 18
chr18_+_42780784 1.716 NM_031303
KATNAL2
katanin p60 subunit A-like 2
chr21_-_45532176 1.715 NM_015227
NM_133635
POFUT2

protein O-fucosyltransferase 2

chr14_+_23908141 1.713 NM_001198966
NFATC4
nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4
chr19_-_63301402 1.705 ZSCAN18
zinc finger and SCAN domain containing 18
chr5_+_92944680 1.700 NM_005654
NR2F1
nuclear receptor subfamily 2, group F, member 1
chr12_+_104248769 1.674 C12orf75
chromosome 12 open reading frame 75
chr13_+_23451838 1.667


chr18_-_45630154 1.618 MYO5B
myosin VB
chr7_-_102708076 1.612 DPY19L2P2
dpy-19-like 2 pseudogene 2 (C. elegans)
chr19_-_51690989 1.596 NM_020709
PNMAL2
PNMA-like 2
chr19_-_63301418 1.591 NM_001145543
NM_001145544
NM_023926
ZSCAN18


zinc finger and SCAN domain containing 18


chr15_+_88035031 1.586 NM_020212
WDR93
WD repeat domain 93
chr9_-_109291866 1.584 NM_004235
KLF4
Kruppel-like factor 4 (gut)
chr16_-_674318 1.577 JMJD8
jumonji domain containing 8
chr8_-_485330 1.571 NM_175075
C8orf42
chromosome 8 open reading frame 42
chr19_-_63301386 1.570 ZSCAN18
zinc finger and SCAN domain containing 18
chr1_-_48710263 1.567 SPATA6
spermatogenesis associated 6
chr22_+_21817512 1.559 NM_004914
RAB36
RAB36, member RAS oncogene family
chr18_+_50049846 1.551 NM_007195
POLI
polymerase (DNA directed) iota
chr13_-_59223074 1.540


chr6_+_117044334 1.540 NM_001010892
NM_001161664
RSPH4A

radial spoke head 4 homolog A (Chlamydomonas)

chr17_-_71648965 1.537 NM_001454
FOXJ1
forkhead box J1
chr8_-_94781836 1.536 LOC642924
hypothetical LOC642924
chr19_-_584526 1.535 POLRMT
polymerase (RNA) mitochondrial (DNA directed)
chr9_+_115396020 1.526 NM_144489
RGS3
regulator of G-protein signaling 3
chr19_-_584563 1.518 NM_005035
POLRMT
polymerase (RNA) mitochondrial (DNA directed)
chr22_+_25383392 1.517 MIAT
myocardial infarction associated transcript (non-protein coding)
chr11_+_85243791 1.511 NM_173556
CCDC83
coiled-coil domain containing 83
chr19_-_7459867 1.511 NM_080662
PEX11G
peroxisomal biogenesis factor 11 gamma
chr11_+_133444175 1.504 JAM3
junctional adhesion molecule 3
chr19_-_584474 1.501 POLRMT
polymerase (RNA) mitochondrial (DNA directed)
chr1_+_215871288 1.499 NM_138796
SPATA17
spermatogenesis associated 17
chr16_-_674357 1.492 NM_001005920
JMJD8
jumonji domain containing 8
chr2_-_233501069 1.459 NM_001114090
NGEF
neuronal guanine nucleotide exchange factor
chr5_+_43228083 1.458 NM_153361
MGC42105
serine/threonine-protein kinase NIM1
chr1_+_33319287 1.447 NM_052998
ADC
arginine decarboxylase
chr6_-_165643064 1.435 NM_144980
C6orf118
chromosome 6 open reading frame 118
chr11_+_120399966 1.429 NM_001130047
NM_152715
TBCEL

tubulin folding cofactor E-like

chrX_-_71268475 1.427 NM_001024455
RGAG4
retrotransposon gag domain containing 4
chr7_+_156126157 1.426 NM_030936
NM_001184996
RNF32

ring finger protein 32

chr11_+_93885342 1.421 NM_001190462
LOC643037
hypothetical protein LOC643037
chr9_-_129537372 1.410 NM_001085347
NM_001134430
NM_001134431
NM_130459
TOR2A



torsin family 2, member A



chr3_+_50281582 1.399 SEMA3B
sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B
chr5_-_54565181 1.396 NM_021147
CCNO
cyclin O
chr8_+_94781910 1.394 NM_145269
FAM92A1
family with sequence similarity 92, member A1
chr3_-_58538110 1.383 FAM107A
family with sequence similarity 107, member A
chr3_+_156280129 1.372 NM_000902
MME
membrane metallo-endopeptidase
chr1_+_37795101 1.362 NM_003462
DNALI1
dynein, axonemal, light intermediate chain 1
chr14_+_105063975 1.349 NM_025268
TMEM121
transmembrane protein 121
chr11_-_56846246 1.344 TNKS1BP1
tankyrase 1 binding protein 1, 182kDa
chr4_-_87500201 1.340 MAPK10
mitogen-activated protein kinase 10
chr1_-_48710378 1.336 NM_019073
SPATA6
spermatogenesis associated 6
chr22_-_16887151 1.334 NM_001122731
NM_001136004
NM_015241
MICAL3


microtubule associated monoxygenase, calponin and LIM domain containing 3



Gene Ontology Analysis

Gene overrepresentation in process category:

enrichment   p-value GO term description
4.77 4.55e-05 GO:0030031 cell projection assembly
2.90 1.14e-04 GO:0007017 microtubule-based process
7.05 3.37e-04 GO:0042384 cilium assembly
4.94 3.96e-04 GO:0010927 cellular component assembly involved in morphogenesis
3.47 1.18e-02 GO:0007018 microtubule-based movement
14.42 1.19e-02 GO:0035082 axoneme assembly
4.98 1.47e-02 GO:0060271 cilium morphogenesis

Gene overrepresentation in compartment category:

enrichment   p-value GO term description
8.32 1.15e-12 GO:0005930 axoneme
8.91 4.23e-10 GO:0035085 cilium axoneme
6.89 1.20e-09 GO:0044441 cilium part
4.28 1.94e-09 GO:0005929 cilium
2.25 5.06e-07 GO:0015630 microtubule cytoskeleton
2.93 2.65e-06 GO:0005874 microtubule
5.89 1.66e-04 GO:0019861 flagellum
6.41 6.36e-04 GO:0030286 dynein complex
2.23 1.15e-03 GO:0044463 cell projection part
5.24 4.53e-03 GO:0005932 microtubule basal body
12.82 5.09e-03 GO:0035086 flagellar axoneme
12.82 5.09e-03 GO:0097014 microtubule-based flagellar cytoplasm
1.53 6.36e-03 GO:0005856 cytoskeleton
1.59 1.16e-02 GO:XXXXXXX unannotated
3.44 1.63e-02 GO:0005875 microtubule associated complex
1.69 1.79e-02 GO:0042995 cell projection
1.61 2.05e-02 GO:0044430 cytoskeletal part
6.46 2.11e-02 GO:0044447 axoneme part
1.15 2.52e-02 GO:0005737 cytoplasm
5.27 3.12e-02 GO:0009434 microtubule-based flagellum
8.87 4.49e-02 GO:0005858 axonemal dynein complex

Gene overrepresentation in function category:

enrichment   p-value GO term description
4.74 1.74e-04 GO:0003777 microtubule motor activity
3.13 4.02e-03 GO:0003774 motor activity